Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_07g0018010 OGI:07058750 | 15/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr07:20949550-20953853
Gene Symbol RLCK237, OsRLCK237
DNA seq

cagtatattttgctgtctttgattcttttggtaatcagtctggtacattgcgttatatacttatgaaagcctaacctaacctggcaaagaatccttcagcggaatggcagatcccacacagcgagcacagtttcaccgttgcacacttctacagttacttgccttgcaccgacgccgccgtcgacgtaccagacgacgtgccccccgagctggcaccggcaccgccgccgccgccgccgttcctcctggcacagaacgccggcttggacggcgccctgagcgagaccgtgtcgctgccgagcatcatcaccaccgacgacatcaccggccgatccgcagggttctcctgcacgcagagcagaccgatgtggatgcaccgcatcacgtcgctccacgagaagccgccgcccatcaccgggtcgaccgcctccgacaccgccctcgccgtccactgctcccacacctgcacaaaaacgagtaatccagtcaattttagctaagcaatcacctcatttttccatgaacagacgagtaggatcatatggttagtgctcacaagggttaagaggtcttcggattgcagggagttgtagcagtcgttgttcttcttccccgtcacgatctccagcaccatgacgccgaagctgaacacgtcggacttgagggagtagttgcctcgcatcgcgtattccggtgacatgtacccactgaaatacaacagcgtaaagtactattcattaactgaccatccaagcaacagctttcaacaaattgttatgttctctgtatttgggttactgccactgactatgtgccgatgacgaggttggtgaccccctgcgtctggtctcgcccgaagagcctcgcgagcccaaagtcagagatcttcgggttcatgttcatgtcgagcaagatgttgctcgctttgagatcacggtggactaccttgagctgcgagtcctcgtggaggtattgcaggccacgagcaatgccgttgatgatcttgtacctctttccccaatcaagctgttgacgcttgtcggcgtctgatattgataaaaaaacatgttgagagtgaatgatcagcttgatgttattgaactttgcagagaaaatggtgaagatatttagataaaattgagtggattagtaagtttggtggtaccaaagaggatctgatcgaggctgcggttgggaacaaactcatagacgagaagcctctcctcttgctccaggcagacaccgacaagcctgacaagattcttgtgctggagctttgcaaccaaggcgagctcgttcttcagctctcccactccttgtgttgagctcttcgataatctcttcactgctatttcatcgccatcaggcagagtaccctgttcagaccaaattcataaaaacacttagtaatattttcagtgatattttcatcagttatgtttgactcagcaccttgtacactgcaccaaatccaccttcgccaagcttgttacgttctgcaaaacaccctgtagcagctcgtaaagtagaaatgtcgatgagcatcgactccacacttgaaatattctccgattcagcaaagttgctggaatctgttcaagtataaatgtcaatgtaagctaacaacttaatttgtttcaaattctccttgaaaaattttgcagggcatacatggctgagttgctcctgatcgtagtctctccatcctcctccagaagcagagccaaactagaatgttgattagcactaaagctgctatagtaggcagcaaaattgctagaaccaagcgaggaacattgtaatctttccctgtgaattgacagatgcagactaatttcagatcaaatgagtaagttgcaactaaacacataatcaatagcatcacgcaagcaacgtgcaagagctgccagaagctaacaggcaagtaccaacatcgccttcagtccttttcaatctcatttgccatattcttgtcatgtatattcagaaaactgaaggaaaaaaatgtttttttattctgtcaagatcatttaaacaagagtaaatttcgtaaagagtaaattatattggtcgtacacaaacttgttaggtgggtgcaatttattacataaacttgtaaaatgctcgttttagtacacaaacttgtctatttcgtgcgaacgagaaccaaaatatcatttgctcggtttttttcatctttttctactatcactatatcatattctatttttttattgaagaggtgtatgtctaatagcaaccttctcagatatatgtttacataatatcctaattagcccctaaattaataagattagctatatagtgtccttttcgccttcctccgaacgcactagacaagttcatgcactagattgcacccacctgacaaattcatgtaccaccaatgcaattcactatttcgtaaaactacagatactttgcacgatctatcacaaaactacagattcaatgtcttcgtttatcacaaaactacatgtactttacacaatatattataaaactacatatttaagaacttgctttacaaaactacatatttaatatcttcatttatcacaaaactacaggtttagtgtctccattatcacaaaactataggttttaaaacactaaatttgtaattttgtgataaataaagacaataaatgtgtagttctgtgataaacgaatacactaaatctatagttttgtgaaacaaattcttatatctgtagttttgtgatatattgtacaaagtacttgtagttttgtgataaacggagacactaaatctttagttttgtgaaacaagctcttaaatatttagttttatgataaattgtgcaaaacaaatgtagttttgtgaaatttactctttaaacaaacattgcttctaactgctaatgccgtagccaatacagtgtgttgccttcagaatgtgcctctgtattggagcaaacctacaggcgctgactgaagaacaaaaccacaggctgtatgatgataggaacattgtgaagggctaaatgccaacaaatgtgacatcttatctacttggtgcactgcatctctaatcccacttggcctacgaattccattctttaattttattattattttttttagatacactgaagctatgacatactgaaaatgaaatggcactgtccttatacaccacccccacaaataaacaacacagatagatcatctaccgattatatgtgtatagtactccacaatgctagcagtgttcgttaacgactctcacagggttaagtagcagttgaattgatcaacggaagatcaatcacatcaaaccaacttcaggggacttcgctaatcatttttttcaccaatggatgaactaaacaatgcttcaatcatttgaaagccatcacgcacgtgcaaaatctagagtaagcaaaaagaaaaaaaagaagcatgctttgactcaccttctccggccgccgccgcggcagcggcgggcagggatgctgtcggaatcggtggcgccgtcagatgcaccatcaccgggccgttgaggaaggggtttacctcgtaccggtagctgcacctgactccaagaaccctgccgccgatgcggttcgtgaacagcctcggcagcttggctatgatggcggcgaggcagtcgccgcactgcgccggcgtcaggtccggcgtgcactgcgcccagctgtacaccttggggaactccgactccctgtcgaggacggcctcgccggacgcgtaccggcgggtggagttgcgcgccgcgtagtcggcggtggcgttcacgagcgccgccaccatgccgttgaacctgcccgggtccgacgtgacgttccgcaggttgacgcggttcgtcgaggcggcgttgtcgacggaggagaggaaggggacgttggagtagtagaggatgcaggggtcgtagtagatggcggcgtccttgtcgtaggcacacatgttctgcacgtcctggaacgccgtggcgaggcagccggagcactccgtggcgttggcgtccccgcggcacagcgccagcgccgacacctgctccggcacggcgcccaccatggcggtcgcgaagaggtccggcgacgacgaggtgttccggggcagcaccgccgcgacggcgtcgaggttggcctggtacgtgctgttggtcgtgaagttgcccgtcgtgccgcacacctgccacgggtacgccgcgccacgcggcgccagcgccagcagcacgacggcggcggtgagcagcatcgagaggcagccagcgcgatgcgccatggacacagctgaca

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CDS seq

atggcgcatcgcgctggctgcctctcgatgctgctcaccgccgccgtcgtgctgctggcgctggcgccgcgtggcgcggcgtacccgtggcaggtgtgcggcacgacgggcaacttcacgaccaacagcacgtaccaggccaacctcgacgccgtcgcggcggtgctgccccggaacacctcgtcgtcgccggacctcttcgcgaccgccatggtgggcgccgtgccggagcaggtgtcggcgctggcgctgtgccgcggggacgccaacgccacggagtgctccggctgcctcgccacggcgttccaggacgtgcagaacatgtgtgcctacgacaaggacgccgccatctactacgacccctgcatcctctactactccaacgtccccttcctctcctccgtcgacaacgccgcctcgacgaaccgcgtcaacctgcggaacgtcacgtcggacccgggcaggttcaacggcatggtggcggcgctcgtgaacgccaccgccgactacgcggcgcgcaactccacccgccggtacgcgtccggcgaggccgtcctcgacagggagtcggagttccccaaggtgtacagctgggcgcagtgcacgccggacctgacgccggcgcagtgcggcgactgcctcgccgccatcatagccaagctgccgaggctgttcacgaaccgcatcggcggcagggttcttggagtcaggtgcagctaccggtacgaggtaaaccccttcctcaacggcccggtgatggtgcatctgacggcgccaccgattccgacagcatccctgcccgccgctgccgcggcggcggccggagaagggaaagattacaatgttcctcgcttggttctagcaattttgctgcctactatagcagctttagtgctaatcaacattctagtttggctctgcttctggaggaggatggagagactacgatcaggagcaactcagccatattccagcaactttgctgaatcggagaatatttcaagtgtggagtcgatgctcatcgacatttctactttacgagctgctacagggtgttttgcagaacgtaacaagcttggcgaaggtggatttggtgcagtgtacaagggtactctgcctgatggcgatgaaatagcagtgaagagattatcgaagagctcaacacaaggagtgggagagctgaagaacgagctcgccttggttgcaaagctccagcacaagaatcttgtcaggcttgtcggtgtctgcctggagcaagaggagaggcttctcgtctatgagtttgttcccaaccgcagcctcgatcagatcctctttgacgccgacaagcgtcaacagcttgattggggaaagaggtacaagatcatcaacggcattgctcgtggcctgcaatacctccacgaggactcgcagctcaaggtagtccaccgtgatctcaaagcgagcaacatcttgctcgacatgaacatgaacccgaagatctctgactttgggctcgcgaggctcttcgggcgagaccagacgcagggggtcaccaacctcgtcatcggcacatatgggtacatgtcaccggaatacgcgatgcgaggcaactactccctcaagtccgacgtgttcagcttcggcgtcatggtgctggagatcgtgacggggaagaagaacaacgactgctacaactccctgcaatccgaagacctcttaacccttgtgtgggagcagtggacggcgagggcggtgtcggaggcggtcgacccggtgatgggcggcggcttctcgtggagcgacgtgatgcggtgcatccacatcggtctgctctgcgtgcaggagaaccctgcggatcggccggtgatgtcgtcggtggtgatgatgctcggcagcgacacggtctcgctcagggcgccgtccaagccggcgttctgtgccagctcggggggcacgtcgtctggtacgtcgacggcggcgtcggtgcaaggcaagtaa

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Protein seq

MAHRAGCLSMLLTAAVVLLALAPRGAAYPWQVCGTTGNFTTNSTYQANLDAVAAVLPRNTSSSPDLFATAMVGAVPEQVSALALCRGDANATECSGCLATAFQDVQNMCAYDKDAAIYYDPCILYYSNVPFLSSVDNAASTNRVNLRNVTSDPGRFNGMVAALVNATADYAARNSTRRYASGEAVLDRESEFPKVYSWAQCTPDLTPAQCGDCLAAIIAKLPRLFTNRIGGRVLGVRCSYRYEVNPFLNGPVMVHLTAPPIPTASLPAAAAAAAGEGKDYNVPRLVLAILLPTIAALVLINILVWLCFWRRMERLRSGATQPYSSNFAESENISSVESMLIDISTLRAATGCFAERNKLGEGGFGAVYKGTLPDGDEIAVKRLSKSSTQGVGELKNELALVAKLQHKNLVRLVGVCLEQEERLLVYEFVPNRSLDQILFDADKRQQLDWGKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDMNMNPKISDFGLARLFGRDQTQGVTNLVIGTYGYMSPEYAMRGNYSLKSDVFSFGVMVLEIVTGKKNNDCYNSLQSEDLLTLVWEQWTARAVSEAVDPVMGGGFSWSDVMRCIHIGLLCVQENPADRPVMSSVVMMLGSDTVSLRAPSKPAFCASSGGTSSGTSTAASVQGK

Function Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_07g0018010 OsLiXu_07g0018010.01 Chr07 20949550 20953853 - NAM
CDS seq

atggcgcatcgcgctggctgcctctcgatgctgctcaccgccgccgtcgtgctgctggcgctggcgccgcgtggcgcggcgtacccgtggcaggtgtgcggcacgacgggcaacttcacgaccaacagcacgtaccaggccaacctcgacgccgtcgcggcggtgctgccccggaacacctcgtcgtcgccggacctcttcgcgaccgccatggtgggcgccgtgccggagcaggtgtcggcgctggcgctgtgccgcggggacgccaacgccacggagtgctccggctgcctcgccacggcgttccaggacgtgcagaacatgtgtgcctacgacaaggacgccgccatctactacgacccctgcatcctctactactccaacgtccccttcctctcctccgtcgacaacgccgcctcgacgaaccgcgtcaacctgcggaacgtcacgtcggacccgggcaggttcaacggcatggtggcggcgctcgtgaacgccaccgccgactacgcggcgcgcaactccacccgccggtacgcgtccggcgaggccgtcctcgacagggagtcggagttccccaaggtgtacagctgggcgcagtgcacgccggacctgacgccggcgcagtgcggcgactgcctcgccgccatcatagccaagctgccgaggctgttcacgaaccgcatcggcggcagggttcttggagtcaggtgcagctaccggtacgaggtaaaccccttcctcaacggcccggtgatggtgcatctgacggcgccaccgattccgacagcatccctgcccgccgctgccgcggcggcggccggagaagggaaagattacaatgttcctcgcttggttctagcaattttgctgcctactatagcagctttagtgctaatcaacattctagtttggctctgcttctggaggaggatggagagactacgatcaggagcaactcagccatattccagcaactttgctgaatcggagaatatttcaagtgtggagtcgatgctcatcgacatttctactttacgagctgctacagggtgttttgcagaacgtaacaagcttggcgaaggtggatttggtgcagtgtacaagggtactctgcctgatggcgatgaaatagcagtgaagagattatcgaagagctcaacacaaggagtgggagagctgaagaacgagctcgccttggttgcaaagctccagcacaagaatcttgtcaggcttgtcggtgtctgcctggagcaagaggagaggcttctcgtctatgagtttgttcccaaccgcagcctcgatcagatcctctttgacgccgacaagcgtcaacagcttgattggggaaagaggtacaagatcatcaacggcattgctcgtggcctgcaatacctccacgaggactcgcagctcaaggtagtccaccgtgatctcaaagcgagcaacatcttgctcgacatgaacatgaacccgaagatctctgactttgggctcgcgaggctcttcgggcgagaccagacgcagggggtcaccaacctcgtcatcggcacatatgggtacatgtcaccggaatacgcgatgcgaggcaactactccctcaagtccgacgtgttcagcttcggcgtcatggtgctggagatcgtgacggggaagaagaacaacgactgctacaactccctgcaatccgaagacctcttaacccttgtgtgggagcagtggacggcgagggcggtgtcggaggcggtcgacccggtgatgggcggcggcttctcgtggagcgacgtgatgcggtgcatccacatcggtctgctctgcgtgcaggagaaccctgcggatcggccggtgatgtcgtcggtggtgatgatgctcggcagcgacacggtctcgctcagggcgccgtccaagccggcgttctgtgccagctcggggggcacgtcgtctggtacgtcgacggcggcgtcggtgcaaggcaagtaa

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Protein seq

MAHRAGCLSMLLTAAVVLLALAPRGAAYPWQVCGTTGNFTTNSTYQANLDAVAAVLPRNTSSSPDLFATAMVGAVPEQVSALALCRGDANATECSGCLATAFQDVQNMCAYDKDAAIYYDPCILYYSNVPFLSSVDNAASTNRVNLRNVTSDPGRFNGMVAALVNATADYAARNSTRRYASGEAVLDRESEFPKVYSWAQCTPDLTPAQCGDCLAAIIAKLPRLFTNRIGGRVLGVRCSYRYEVNPFLNGPVMVHLTAPPIPTASLPAAAAAAAGEGKDYNVPRLVLAILLPTIAALVLINILVWLCFWRRMERLRSGATQPYSSNFAESENISSVESMLIDISTLRAATGCFAERNKLGEGGFGAVYKGTLPDGDEIAVKRLSKSSTQGVGELKNELALVAKLQHKNLVRLVGVCLEQEERLLVYEFVPNRSLDQILFDADKRQQLDWGKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDMNMNPKISDFGLARLFGRDQTQGVTNLVIGTYGYMSPEYAMRGNYSLKSDVFSFGVMVLEIVTGKKNNDCYNSLQSEDLLTLVWEQWTARAVSEAVDPVMGGGFSWSDVMRCIHIGLLCVQENPADRPVMSSVVMMLGSDTVSLRAPSKPAFCASSGGTSSGTSTAASVQGK

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Gene Transcript Chromosome Start End Strand Source
OsLiXu_07g0018010 OsLiXu_07g0018010.02 Chr07 20949550 20953853 - NAM
CDS seq

atggcgcatcgcgctggctgcctctcgatgctgctcaccgccgccgtcgtgctgctggcgctggcgccgcgtggcgcggcgtacccgtggcaggtgtgcggcacgacgggcaacttcacgaccaacagcacgtaccaggccaacctcgacgccgtcgcggcggtgctgccccggaacacctcgtcgtcgccggacctcttcgcgaccgccatggtgggcgccgtgccggagcaggtgtcggcgctggcgctgtgccgcggggacgccaacgccacggagtgctccggctgcctcgccacggcgttccaggacgtgcagaacatgtgtgcctacgacaaggacgccgccatctactacgacccctgcatcctctactactccaacgtccccttcctctcctccgtcgacaacgccgcctcgacgaaccgcgtcaacctgcggaacgtcacgtcggacccgggcaggttcaacggcatggtggcggcgctcgtgaacgccaccgccgactacgcggcgcgcaactccacccgccggtacgcgtccggcgaggccgtcctcgacagggagtcggagttccccaaggtgtacagctgggcgcagtgcacgccggacctgacgccggcgcagtgcggcgactgcctcgccgccatcatagccaagctgccgaggctgttcacgaaccgcatcggcggcagggttcttggagtcaggtgcagctaccggtacgaggtaaaccccttcctcaacggcccggtgatggtgcatctgacggcgccaccgattccgacagcatccctgcccgccgctgccgcggcggcggccggagaagggaaagattacaatgttcctcgcttggttctagcaattttgctgcctactatagcagctttagtgctaatcaacattctagtttggctctgcttctggaggaggatggagagactacgatcaggagcaactcagccatattccagcaactttgctgaatcggagaatatttcaagtgtggagtcgatgctcatcgacatttctactttacgagctgctacagggtgttttgcagaacgtaacaagcttggcgaaggtggatttggtgcagtgtacaagggtactctgcctgatggcgatgaaatagcagtgaagagattatcgaagagctcaacacaaggagtgggagagctgaagaacgagctcgccttggttgcaaagctccagcacaagaatcttgtcaggcttgtcgacgccgacaagcgtcaacagcttgattggggaaagaggtacaagatcatcaacggcattgctcgtggcctgcaatacctccacgaggactcgcagctcaaggtagtccaccgtgatctcaaagcgagcaacatcttgctcgacatgaacatgaacccgaagatctctgactttgggctcgcgaggctcttcgggcgagaccagacgcagggggtcaccaacctcgtcatcggcacatatgggtacatgtcaccggaatacgcgatgcgaggcaactactccctcaagtccgacgtgttcagcttcggcgtcatggtgctggagatcgtgacggggaagaagaacaacgactgctacaactccctgcaatccgaagacctcttaacccttgtgtgggagcagtggacggcgagggcggtgtcggaggcggtcgacccggtgatgggcggcggcttctcgtggagcgacgtgatgcggtgcatccacatcggtctgctctgcgtgcaggagaaccctgcggatcggccggtgatgtcgtcggtggtgatgatgctcggcagcgacacggtctcgctcagggcgccgtccaagccggcgttctgtgccagctcggggggcacgtcgtctggtacgtcgacggcggcgtcggtgcaaggcaagtaa

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Protein seq

MAHRAGCLSMLLTAAVVLLALAPRGAAYPWQVCGTTGNFTTNSTYQANLDAVAAVLPRNTSSSPDLFATAMVGAVPEQVSALALCRGDANATECSGCLATAFQDVQNMCAYDKDAAIYYDPCILYYSNVPFLSSVDNAASTNRVNLRNVTSDPGRFNGMVAALVNATADYAARNSTRRYASGEAVLDRESEFPKVYSWAQCTPDLTPAQCGDCLAAIIAKLPRLFTNRIGGRVLGVRCSYRYEVNPFLNGPVMVHLTAPPIPTASLPAAAAAAAGEGKDYNVPRLVLAILLPTIAALVLINILVWLCFWRRMERLRSGATQPYSSNFAESENISSVESMLIDISTLRAATGCFAERNKLGEGGFGAVYKGTLPDGDEIAVKRLSKSSTQGVGELKNELALVAKLQHKNLVRLVDADKRQQLDWGKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDMNMNPKISDFGLARLFGRDQTQGVTNLVIGTYGYMSPEYAMRGNYSLKSDVFSFGVMVLEIVTGKKNNDCYNSLQSEDLLTLVWEQWTARAVSEAVDPVMGGGFSWSDVMRCIHIGLLCVQENPADRPVMSSVVMMLGSDTVSLRAPSKPAFCASSGGTSSGTSTAASVQGK

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A5 Chr07 20950595 20950793 - OsLiXu_07g0018010.01 OsLiXu_07g0018010.01,OsLiXu_07g0018010.02 All

Expression

Leaf Root Panicle
FPKM 0.0 0.364644 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_07g0537500 RBH 0.113714 0.0 0.497282
Nipponbare | IRGSP 1.0 | MSU LOC_Os07g35310 RBH 0.061999 0.0 0.229390
Nipponbare | IRGSP 1.0 | RAP-db Os07g0537500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_07g0018000 RBH 0.0 3.211792 0.370232
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_07g0017890 RBH 0.0 0.0 0.145151
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_07g0017870 RBH 0.000000 1.560549 0.000000
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_07g0017790 RBH 0.0 0.066649 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_07g0017890 RBH 0.0 1.607588 3.887622
Minghui 63 | MH63RS3 | HZAU OsMH63_07G0343800 RBH 0.286414 7.1279885 0.537814
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_07g0018380 RBH 0.0 0.444536 0.233050
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_07G0358700 RBH 1.058621 6.388328 3.1335275
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_07g0017630 RBH 0.000000 0.992036 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_07g0017790 RBH 0.0 7.412187 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_07g0017730 RBH 0.0 14.414779 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_07g0018050 RBH 0.0 0.589770 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0017800 RBH 0.0 1.935931 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_07G017770 RBH 0.000000 1.230311 0.610493
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_07g0017640 RBH 0.000000 3.718342 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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