Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| LOC_Os07g35310 | OGI:07058750 | 15/16 | Nipponbare | IRGSP 1.0 | MSU | Chr07:21133028-21140733 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | GTCAACAAAAACTTTACCCTTTTCTCCATGCGCTTCTATTAAAAAGAGCAATTTTACAGTGCTTGAGGAGGTTCCATGAGTTACCAAAAATTTAATGTAAAATTTGGTACCTCATATTACCTAGGTAACAAATTTACAATAGAAAAAGTAAAACCTCATGTAATCTCTTCAAGGACCGTAAAATTACTCTCTATTACAAAAGTTTACAAATATTTTGAAATCACTGGTTTGTAGCACAGGAACTCAGGCTCCATGGAGCCACTGAACCACAAGTTTTCAGTATATTTTGCTGTCTTTGATTCTTTTGGTAATCAGTCTGGTACATTGCGTTATATACTTATGAAAGCCTAACCTAACCTGGCAAAGAATGCTTCAGCGGAATGGCAGATCCCACACAGCGAGCACAGTTTCACCGTTGCACACTTCTACAGTTACTTGCCTTGCACCGACGCCGCCGTCGACGTACCAGACGACGTGCCCCCCGAGCTGGCACCGGCACCGCCGGTGCCGCCGTTCCTCCTGGCACAGAACGCCGGCTTGGACGGCGCCCTGAGCGACACCGTGTCGCTGCCGAGCATCATCACCACCGACGACATCACCGGCCGATCCGCAGGGTTCTCCTGCACGCAGAGCAGACCGATGTGGATGCACCGCATCACGTCGCTCCACGAGAAACCGCCGCCCATCACCGGGTCGACCGCCTCCGACACCGCCCTCGCCGTCCACTGCTCCCACACCTGCACAAAAACGAGTAATCCAGTCAATTTTAGCTAAGCAATCACCTCATTTTTCCATGAACAGACGAGTAGGATCATATGGTTAGTGCTCACAAGGGTTAAGAGGTCTTCGGATTGCAGGGAGTTGTAGCAGTCGTTGTTCTTCTTCCCCGTCACGATCTCCAGCACCATGACGCCGAAGCTGAACACGTCGGACTTGAGGGAGTAGTTGCCTCGCATCGCATATTCCGGTGACATGTACCCACTGAAATACAACAGCGTAAAGTACTATTCATTAACTGACCATCCAAGCAACAGCTTTCAACAAATTGTTATGTTCTCTGTATTTGGGTTACTGCCACTGACTATGTGCCGATGACGAGGTTGGTGACCCCCTGCGTCTGGTCTCGCCCGAAGAGCCTCGCGAGCCCAAAGTCAGAGATCTTCGGGTTCATGTTCATGTCGAGCAAGATGTTGCTCGCTTTGAGATCACGGTGGACTACCTTGAGCTGCGAGTCCTCGTGGAGGTATTGCAGGCCACGAGCAATGCCGTTGATGATCTTGTACCTCTTTCCCCAATCAAGCTGTTGACGCTTGTCGGCGTCTGATATTGATAAAAAAACATGTTGAGAGTGAATGATCAGCTTGATGTTATTGAACTTTGCAGAGAAAATGGTGAAGATATTTAGCTAAAATTGAGTGGATTAGTAAGTTTGGTGGTACCAAAGAGGATCTGATCGAGGCTGCGGTTGGGAACAAACTCATAGACGAGAAGCCTCTCCTCTTGCTCCAGGCAGACACCGACAAGCCTGACAAGATTCTTGTGCTGGAGCTTTGCAACCAATGCGAGCTCGTTCTTCAGCTCTCCCACTCCTTGTGCTGAACTCTTCGATAATCTCTTCACTGCTATTTCATCGCCATCAGGCAGAGTACCCTGTTCAGACCAAATCAATAGTAACACTTAGTAATGAATATATTTTTAGTGATACTTTCTTCAGTTATGTTAGAGTCAGCACCTTGTACACTGCACCAAATCCACCTTCGCCAAGCTTGTTGCGTTCTGCAAAACACCCTGTAGCAGCTCGTAAAGTCGAAATGTCGATAAGCATCGACTCCACACTTGAAATATTCTCCGATTCAGCAGAGTTGCTGGAATCTGTTCAAGTATAAATGCCAATGTAAGCTAACAACTTAATTTGTTTCAAATTCTCCTTGAAAAATTTTGCAGGGCATACATGGCTGAGTTGCTCCTGATCGTAGCCTCTCCATCCTCCTCCAGAAGCAGAGCCAAACTAGAATGTTGATTAGCACTAAAGCTGCTATAGTAGGCAGCAAAATTGCTAGAACCAAGCGAGGAACATTGTAATCTTTCCCTGTGAATTGACAGATGTAGACTAATTTCAGATCAAATGAGTAAGTTGCAACTAAACACATAATCAATAGCATTACGCAAGCAACGTGCAAGAGCTGCCAGAAGCTAATAGGCAAGTACCAACATCGCCTTTCAGTCATTTTCAATCTCATTTGCCATATTCTTGTCATGTATATTCAGAAAACTGAAGGAAAAAATATTTTTTTATTCTGTCAAGATCATTTAAACAAGAGTAAATTTCGTAAAGAGTAAATTGTATTGGTGGTACACAAACTTGTTAGGTGGGTACAATTTATTACATAAACTTGTAAAATCCTCATTTCAGTACACAAACTTGTCTATTTCGTGCGAACGAGGACCAAAATATCATTTGCTTGGTTTTTTTCATCTTTTTCTACTATCACTATATCATATTCTATTTTTTTTATTGAAGAGGTGTATGTCTAATAGCAACCTTCTCAGATATATGTTTACATAATATCCTAATTAGCCCCTAAATCAATAAGATTAGCTATATATATAATGTCCTTTTCGCCTTCCTCCGGACGCACTAGACAAGTTCATGCACCAACATGAGCATTTTATAAGTTCATGCACTAGATTGCACCCACCTGACAAATTCGTGTACCGCCAATGCAATTCACTCTTTCGTAAAACTACAGATACTTTGCACGATTTATCACAAAACTACAGATTAAGAACTTGTTTCACAAAAATACAGATTCAATGTCTTCGTTTATCACAAAACTACATGTACTTTACACAATATATTATAAAACTACATATTTAAGAACTTGCTTTACAAAACTACAGATTTAATATCTTCATTTATCACAAAACTACAGGTTTAGTGTCTCCATTATCACAAAACTATAGGTTTTAAAACACTAAATTTGTAGTTTTGTGATAAATAAAGACACTAAATGTGTAGTTCTGTGATAAACGAATACACTAAATCTATAGTTTTATGAAACAAATTCTTAAATCTGTAGTTTTGTGATCTATTGTACAAAGTACTTGTAGTTTTGTGATAAACGGAGACACTAAATCTTTAGTTTTGTGAAACAAGCTCTTAAATATTTAGTTTTATGATAAACTAGCATGGTGGCTCGCGCAGATTACGTGGCTAGCATTATTATATTTTCTCTCATATAATAGCATATATGTTTTCTTAATGTATTATTCAAATATATTAAAATGACAACATAATTTTAAATTTTGTACTAACTTTACGAAACTACTAATGTGTAATATTCATATTGTATTTTATATACGTGATAGTTATTAATTATTCTTAATATTTTTTAAATTCTGAATTTTCGTTATCTGTAAATTGTATTTCTATGTAGACTCTAGGCTCTTCTTCCAATATTTTTTTATTTTTAATTCTGAATTTTTGTTATTTCTAATTGCATTTCTATGTGGACTCTAAACTCATCTTTCAATATTCTTTAATTTTTAATTTCGAATTTCAGTTACTTCTAAATTATATCCCTATATTGACTTTAGAATCTTCTTCCCATGTTTTTTTTTAATTTTGAATTTTAGTTATTTGTAAATTGTATTTTTATATGGACTCTAAACTCTACTTTTAATTTTATTATGTTTATTCCGAATTTTAGTTAGTTTTAAATTCCTATATGGACTCTATACTCTACTTCTAATATTTATTATTTTTAATTCCGAATTTATATTATTTCCTAATTGTATTTCTGTATGGACTCTATACTCTACTTCTAATATTCCTTATTTTTAATTCCGAATTTCTATTATTTCATAATTGTATTTCTATATGGACTCTATACTCTACTTCTAATATTCCTTACTTTTTAATTCCGAATTTCAGTTATTTATAAATTGTATTTCTATATGGACTTTGTTTTTCTTTTTCTCCGATTAATATGAGAATTTCTATGCCGTGAGAGCGAACGTGGAGGCTCCTTTTTCTATTCCTTTAATAAGTTAACTAGCATGGTGGCCCGCGCAGATTGCGCGGCTAGCATCATTATATTTTCTCTCATATAATAGCATATATGTTTTCTCATTATATTATTCAAATATATTAAAATGACAACATAATTTTAAATTTTGCAATAACTTTACGAAACTACTGATGTGTAATATTCATATTTTATTTTATATATGTTTTAGTTATTAATTATTTTTAATATCAAATTTTAGTTATTTGTAAATTATATATATTTTCGGTCTGCTAGTTGACGAAGCGGATTGCATGAAAAGATTTATGTTTGTTAATCTGCTGATGAAGTGGATTGTAGTAAAAAGATTACTGATGTGCTAATTTGCGGCGAGAAAATCATGCGATTACTTTTGTTATTTATGTTTTTCTAGGACATGTATTTATTGAGATGACATGTATTGTGTACAATTAAAAAAGGGATAAGTCAATTACCGTGATATGGGCATGCAGAAATTCTCTCATACGGATTCCAAAGAATCATTATCTGTTTACACACTATCATTATAATATCCTTTGTTTTTTTTTCTATTTGTTCTGTATAGTTATTAATTATTCTTAATATTTTTTAAATTCTGAATTTTCGTTATATGTAAATTGTATTTCTATGTAGACTCTAGGCTCTTCTTCCAATATTTTTTTATTTTTAATTCTGAATTTTTGTTATTTCTAATTGCATTTCTATGTGGACTCTAAACTCATCTTTCAATATTCTTTAATTTTTAATTTCGAATTTCAGTTACTTCTAAATTATATCCCTATATTGACTTTAGAATCTTCTTCCCATGTTTTTTTTTAATTTTGAATTTTAGTTATTTGTAAATTGTATTTTTATATGGACTCTAAACTCTACTTTTAATTTTATTATGTTTATTCCGAATTTTAGTTAGTTTTAAATTCCTATATGGACTCTATACTCTACTTCTAATATTTATTATTTTTAATTCCGAATTTATATTATTTCCTAATTGTATTTCTGTATGGACTCTATACTCTACTTCTAATATTCCTTATTTTTAATTCCGAATTTCTATTATTTCATAATTGTATTTCTATATGGACTCTATACTCTACTTCTAATATTCCTTACTTTTTAATTCCGAATTTCAGTTATTTATAAATTGTATTTCTATATGGACTTTGTTTTTCTTTTTCTCCGATTAATATGAGAATTTCTATGCCGTGAGAGCGAACGTGGAGGCTCCTTTTTCTATTCCTTTAATAAGTTAACTAGCATGGTGGCCCGCGCAGATTGCGCGGCTAGCATCATTATATTTTCTCTCATATAATAGCATATATGTTTTCTCATTATATTATTTAAATATATTAAAATGACAACATAATTTTAAATTTTGCAATAACTTTACGAAACTACTGATGTGTAATATTCATATTTTATTTTATATATGTTTTATTTATTAATTATTTTTAATATCAAATTTTAGTTATTTGTAAATTATATATATTTTCGGTCTGCTAGTTGACGAAGCGGATTGCATGAAAAGATTTATGTTTGTTAATCTGCTGATGAAGTGGATTGTAGTAAAAAGATTACTGATGTGCTAATTTGCGGCGAGAAAATCATGCGATTACTTTTGTTATTTATGTTTTTCTAGGACATGTATTTATTGAGATGACATGTATTGTGTACAATTAAAAAAGGGATAAGTCAATTACCGTGATATGGGCATGCAGAAATTCTCTCATACGGATTCCAAAGAATCATTATCTGTTTACACACTATCATTATAATATCCTTTGTTTTTTTTTCTATTTGTTCTGTCCATTTTAACTTTTAATTTTTCTTGTCCGTTTGCATGACCTAATCCTAATACACTTGGTGTTTTGTTTTTTTCTCTTATTTTCTTTCGATTAATGTGAGAATTCCTAAGCCGTGAGAGCGAACGTGAAGGCTCCTTTTTCTATTACTTTAATTATATAATTATTATATAATAGATAGATAGATTGTGCAAAACACATATAGTTTTGTGAAATTTACTCTTTAAACAAACATTGCTTCTAACTGCTAATGCCGTAGCCAATACAGTGTGTTGCCTTCAGAATGTGCCTCTGTATTGGAGCAAACCTACAGGCGCTGACTGAAGAACAAAACCACAGGCTGTATGATGATAGGAACATTGTGAAGGGCTAAATGCCAACAAATGTGACATCTTATCTACTTGGTGCACTGCATCTCTAATCCCACTTGGCCTACGAATTCCATTCTTTAATTTTATTGTTATTTTTTTGTAGATACACTGAAGCTGACATACTGAAAATGAAATGACACTGTCCCTATACACCACCCCCACAAATAAACAACACAGATAGATCACCTACCGATTATGGCTGTGTTCGACACATGGGGTTGGGAACCCATCTACTCCGCACGAAAAATGGAGCAGTCTATTAACGAGGAACAGGGGTTGGGAACACCCTGAAACAAACGCAGCCTATATGTGTATAGTACTCCACAATGCTAGCAGTGTTCGTTAACGACTCTCACAAGGTTAACTACCAGTTGAATTAATCAACGGAAGATCAATCACATCAAACCAACTTCAGGGGACTTCGCTAATCATTTTTGTCACCAATGGATGAACTAAACAATGTTTCAATCATTTGAAAGCCATCACGCACGTGCAAAATCTAGAGTAAGCAAAAAGAAAAAAAAGAAGCATGCTTTGACTCACCTTCTCCGGCCGCCGCCGCGGCAGCGGCGGGCGGTGATGCTGTCGGAATCGGTGGCGCAGTCAGATGCACCATCACCAGGCCATTGAGGAAGGGGTTTACCTCGTACCGGTAGCTGCACCTGACTCCAAGAACCCTGCCGCCGATGCGGTTCGTGAACAACCTCGGCAGCTTGGCTATGATGGCGGCGAGGCAGTCGCCGCACTGCGCCGGCGTCAGGTCCGGCGTGCACTGCGCCCAGCTGTACACCTTGGGGAACTCCGACTCCCTGTCGAGGACGGCCTCGCCGGACGCGTACCGGCGGGTGGAGTTGTGCGCGGCGTAGTCGGCGGTGGCGTTCACCAGCGCCGCCACCATGCCGTTGAACCTGCCCGGGTCCGACGTGACGTTCTGCAGGTTGACGCGGCTCGTCGAGGCGGCGTTGTCGACGGAGGAGAGGAAGGGGACGTTGGAGTAGTAGAGGATGCAAGGGTCGTAGTAGATGGCGGCGTCCTTGTCGTAGGCGCACATGTTCTGCACGTCCTGGAACGCCGTGGCGAGGCAGCCGGAGCACTCCGTGGCGTTGGCGTCCCCGCGGCACAGCGCCAGCGCCGACACCTGCTCCGGCACGGCGCCCACCATGGCGGTCGCGAAGAGGTCCGGCGACGACGAGATGTTCCGGGGCAGCGCCGCCGCGACGGCGTCGAGGTTGGCCTGGTACGTGCTGTTGGCCGTGAAGTTGCCCGTCGTGCCGCACACCTGCCACGGGTACGCCGCGCCACGCGGCGCCAGCGCCAGCAGCACGACGGCGGCGGTGAGCAGCATCGAGAGGCAGCCAGCGCGATGCGCCATGGACACAGCTGACACTGTCAAGAGGTGGAGGCAGGCGACTTATGTAGGGAGACCGACGCGAGACCGGAGTTCGCCGGGGAGAATGGGCCTCACCTTCCGACACGGAAATGCCGACCTC
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| CDS seq | ATGGCGCATCGCGCTGGCTGCCTCTCGATGCTGCTCACCGCCGCCGTCGTGCTGCTGGCGCTGGCGCCGCGTGGCGCGGCGTACCCGTGGCAGGTGTGCGGCACGACGGGCAACTTCACGGCCAACAGCACGTACCAGGCCAACCTCGACGCCGTCGCGGCGGCGCTGCCCCGGAACATCTCGTCGTCGCCGGACCTCTTCGCGACCGCCATGGTGGGCGCCGTGCCGGAGCAGGTGTCGGCGCTGGCGCTGTGCCGCGGGGACGCCAACGCCACGGAGTGCTCCGGCTGCCTCGCCACGGCGTTCCAGGACGTGCAGAACATGTGCGCCTACGACAAGGACGCCGCCATCTACTACGACCCTTGCATCCTCTACTACTCCAACGTCCCCTTCCTCTCCTCCGTCGACAACGCCGCCTCGACGAGCCGCGTCAACCTGCAGAACGTCACGTCGGACCCGGGCAGGTTCAACGGCATGGTGGCGGCGCTGGTGAACGCCACCGCCGACTACGCCGCGCACAACTCCACCCGCCGGTACGCGTCCGGCGAGGCCGTCCTCGACAGGGAGTCGGAGTTCCCCAAGGTGTACAGCTGGGCGCAGTGCACGCCGGACCTGACGCCGGCGCAGTGCGGCGACTGCCTCGCCGCCATCATAGCCAAGCTGCCGAGGTTGTTCACGAACCGCATCGGCGGCAGGGTTCTTGGAGTCAGGTGCAGCTACCGGTACGAGGTAAACCCCTTCCTCAATGGCCTGGTGATGGTGCATCTGACTGCGCCACCGATTCCGACAGCATCACCGCCCGCCGCTGCCGCGGCGGCGGCCGGAGAAGGGAAAGATTACAATGTTCCTCGCTTGGTTCTAGCAATTTTGCTGCCTACTATAGCAGCTTTAGTGCTAATCAACATTCTAGTTTGGCTCTGCTTCTGGAGGAGGATGGAGAGGCTACGATCAGGAGCAACTCAGCCATATTCCAGCAACTCTGCTGAATCGGAGAATATTTCAAGTGTGGAGTCGATGCTTATCGACATTTCGACTTTACGAGCTGCTACAGGGTGTTTTGCAGAACGCAACAAGCTTGGCGAAGGTGGATTTGGTGCAGTGTACAAGGGTACTCTGCCTGATGGCGATGAAATAGCAGTGAAGAGATTATCGAAGAGTTCAGCACAAGGAGTGGGAGAGCTGAAGAACGAGCTCGCATTGGTTGCAAAGCTCCAGCACAAGAATCTTGTCAGGCTTGTCGGTGTCTGCCTGGAGCAAGAGGAGAGGCTTCTCGTCTATGAGTTTGTTCCCAACCGCAGCCTCGATCAGATCCTCTTTGACGCCGACAAGCGTCAACAGCTTGATTGGGGAAAGAGGTACAAGATCATCAACGGCATTGCTCGTGGCCTGCAATACCTCCACGAGGACTCGCAGCTCAAGGTAGTCCACCGTGATCTCAAAGCGAGCAACATCTTGCTCGACATGAACATGAACCCGAAGATCTCTGACTTTGGGCTCGCGAGGCTCTTCGGGCGAGACCAGACGCAGGGGGTCACCAACCTCGTCATCGGCACATATGGGTACATGTCACCGGAATATGCGATGCGAGGCAACTACTCCCTCAAGTCCGACGTGTTCAGCTTCGGCGTCATGGTGCTGGAGATCGTGACGGGGAAGAAGAACAACGACTGCTACAACTCCCTGCAATCCGAAGACCTCTTAACCCTTGTGTGGGAGCAGTGGACGGCGAGGGCGGTGTCGGAGGCGGTCGACCCGGTGATGGGCGGCGGTTTCTCGTGGAGCGACGTGATGCGGTGCATCCACATCGGTCTGCTCTGCGTGCAGGAGAACCCTGCGGATCGGCCGGTGATGTCGTCGGTGGTGATGATGCTCGGCAGCGACACGGTGTCGCTCAGGGCGCCGTCCAAGCCGGCGTTCTGTGCCAGGAGGAACGGCGGCACCGGCGGTGCCGGTGCCAGCTCGGGGGGCACGTCGTCTGGTACGTCGACGGCGGCGTCGGTGCAAGGCAAGTAA
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| Protein seq | MAHRAGCLSMLLTAAVVLLALAPRGAAYPWQVCGTTGNFTANSTYQANLDAVAAALPRNISSSPDLFATAMVGAVPEQVSALALCRGDANATECSGCLATAFQDVQNMCAYDKDAAIYYDPCILYYSNVPFLSSVDNAASTSRVNLQNVTSDPGRFNGMVAALVNATADYAAHNSTRRYASGEAVLDRESEFPKVYSWAQCTPDLTPAQCGDCLAAIIAKLPRLFTNRIGGRVLGVRCSYRYEVNPFLNGLVMVHLTAPPIPTASPPAAAAAAAGEGKDYNVPRLVLAILLPTIAALVLINILVWLCFWRRMERLRSGATQPYSSNSAESENISSVESMLIDISTLRAATGCFAERNKLGEGGFGAVYKGTLPDGDEIAVKRLSKSSAQGVGELKNELALVAKLQHKNLVRLVGVCLEQEERLLVYEFVPNRSLDQILFDADKRQQLDWGKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDMNMNPKISDFGLARLFGRDQTQGVTNLVIGTYGYMSPEYAMRGNYSLKSDVFSFGVMVLEIVTGKKNNDCYNSLQSEDLLTLVWEQWTARAVSEAVDPVMGGGFSWSDVMRCIHIGLLCVQENPADRPVMSSVVMMLGSDTVSLRAPSKPAFCARRNGGTGGAGASSGGTSSGTSTAASVQGK |
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| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g35310 | LOC_Os07g35310.1 | Chr07 | 21133028 | 21140733 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGCATCGCGCTGGCTGCCTCTCGATGCTGCTCACCGCCGCCGTCGTGCTGCTGGCGCTGGCGCCGCGTGGCGCGGCGTACCCGTGGCAGGTGTGCGGCACGACGGGCAACTTCACGGCCAACAGCACGTACCAGGCCAACCTCGACGCCGTCGCGGCGGCGCTGCCCCGGAACATCTCGTCGTCGCCGGACCTCTTCGCGACCGCCATGGTGGGCGCCGTGCCGGAGCAGGTGTCGGCGCTGGCGCTGTGCCGCGGGGACGCCAACGCCACGGAGTGCTCCGGCTGCCTCGCCACGGCGTTCCAGGACGTGCAGAACATGTGCGCCTACGACAAGGACGCCGCCATCTACTACGACCCTTGCATCCTCTACTACTCCAACGTCCCCTTCCTCTCCTCCGTCGACAACGCCGCCTCGACGAGCCGCGTCAACCTGCAGAACGTCACGTCGGACCCGGGCAGGTTCAACGGCATGGTGGCGGCGCTGGTGAACGCCACCGCCGACTACGCCGCGCACAACTCCACCCGCCGGTACGCGTCCGGCGAGGCCGTCCTCGACAGGGAGTCGGAGTTCCCCAAGGTGTACAGCTGGGCGCAGTGCACGCCGGACCTGACGCCGGCGCAGTGCGGCGACTGCCTCGCCGCCATCATAGCCAAGCTGCCGAGGTTGTTCACGAACCGCATCGGCGGCAGGGTTCTTGGAGTCAGGTGCAGCTACCGGTACGAGGTAAACCCCTTCCTCAATGGCCTGGTGATGGTGCATCTGACTGCGCCACCGATTCCGACAGCATCACCGCCCGCCGCTGCCGCGGCGGCGGCCGGAGAAGGGAAAGATTACAATGTTCCTCGCTTGGTTCTAGCAATTTTGCTGCCTACTATAGCAGCTTTAGTGCTAATCAACATTCTAGTTTGGCTCTGCTTCTGGAGGAGGATGGAGAGGCTACGATCAGGAGCAACTCAGCCATATTCCAGCAACTCTGCTGAATCGGAGAATATTTCAAGTGTGGAGTCGATGCTTATCGACATTTCGACTTTACGAGCTGCTACAGGGTGTTTTGCAGAACGCAACAAGCTTGGCGAAGGTGGATTTGGTGCAGTGTACAAGGGTACTCTGCCTGATGGCGATGAAATAGCAGTGAAGAGATTATCGAAGAGTTCAGCACAAGGAGTGGGAGAGCTGAAGAACGAGCTCGCATTGGTTGCAAAGCTCCAGCACAAGAATCTTGTCAGGCTTGTCGGTGTCTGCCTGGAGCAAGAGGAGAGGCTTCTCGTCTATGAGTTTGTTCCCAACCGCAGCCTCGATCAGATCCTCTTTGACGCCGACAAGCGTCAACAGCTTGATTGGGGAAAGAGGTACAAGATCATCAACGGCATTGCTCGTGGCCTGCAATACCTCCACGAGGACTCGCAGCTCAAGGTAGTCCACCGTGATCTCAAAGCGAGCAACATCTTGCTCGACATGAACATGAACCCGAAGATCTCTGACTTTGGGCTCGCGAGGCTCTTCGGGCGAGACCAGACGCAGGGGGTCACCAACCTCGTCATCGGCACATATGGGTACATGTCACCGGAATATGCGATGCGAGGCAACTACTCCCTCAAGTCCGACGTGTTCAGCTTCGGCGTCATGGTGCTGGAGATCGTGACGGGGAAGAAGAACAACGACTGCTACAACTCCCTGCAATCCGAAGACCTCTTAACCCTTGTGTGGGAGCAGTGGACGGCGAGGGCGGTGTCGGAGGCGGTCGACCCGGTGATGGGCGGCGGTTTCTCGTGGAGCGACGTGATGCGGTGCATCCACATCGGTCTGCTCTGCGTGCAGGAGAACCCTGCGGATCGGCCGGTGATGTCGTCGGTGGTGATGATGCTCGGCAGCGACACGGTGTCGCTCAGGGCGCCGTCCAAGCCGGCGTTCTGTGCCAGGAGGAACGGCGGCACCGGCGGTGCCGGTGCCAGCTCGGGGGGCACGTCGTCTGGTACGTCGACGGCGGCGTCGGTGCAAGGCAAGTAA
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| Protein seq | MAHRAGCLSMLLTAAVVLLALAPRGAAYPWQVCGTTGNFTANSTYQANLDAVAAALPRNISSSPDLFATAMVGAVPEQVSALALCRGDANATECSGCLATAFQDVQNMCAYDKDAAIYYDPCILYYSNVPFLSSVDNAASTSRVNLQNVTSDPGRFNGMVAALVNATADYAAHNSTRRYASGEAVLDRESEFPKVYSWAQCTPDLTPAQCGDCLAAIIAKLPRLFTNRIGGRVLGVRCSYRYEVNPFLNGLVMVHLTAPPIPTASPPAAAAAAAGEGKDYNVPRLVLAILLPTIAALVLINILVWLCFWRRMERLRSGATQPYSSNSAESENISSVESMLIDISTLRAATGCFAERNKLGEGGFGAVYKGTLPDGDEIAVKRLSKSSAQGVGELKNELALVAKLQHKNLVRLVGVCLEQEERLLVYEFVPNRSLDQILFDADKRQQLDWGKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDMNMNPKISDFGLARLFGRDQTQGVTNLVIGTYGYMSPEYAMRGNYSLKSDVFSFGVMVLEIVTGKKNNDCYNSLQSEDLLTLVWEQWTARAVSEAVDPVMGGGFSWSDVMRCIHIGLLCVQENPADRPVMSSVVMMLGSDTVSLRAPSKPAFCARRNGGTGGAGASSGGTSSGTSTAASVQGK
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| LOC_Os07g35310 | LOC_Os07g35310.2 | Chr07 | 21133028 | 21140733 | - | MSU_osa1r7 | ||
| CDS seq | ATGGCGCATCGCGCTGGCTGCCTCTCGATGCTGCTCACCGCCGCCGTCGTGCTGCTGGCGCTGGCGCCGCGTGGCGCGGCGTACCCGTGGCAGGTGTGCGGCACGACGGGCAACTTCACGGCCAACAGCACGTACCAGGCCAACCTCGACGCCGTCGCGGCGGCGCTGCCCCGGAACATCTCGTCGTCGCCGGACCTCTTCGCGACCGCCATGGTGGGCGCCGTGCCGGAGCAGGTGTCGGCGCTGGCGCTGTGCCGCGGGGACGCCAACGCCACGGAGTGCTCCGGCTGCCTCGCCACGGCGTTCCAGGACGTGCAGAACATGTGCGCCTACGACAAGGACGCCGCCATCTACTACGACCCTTGCATCCTCTACTACTCCAACGTCCCCTTCCTCTCCTCCGTCGACAACGCCGCCTCGACGAGCCGCGTCAACCTGCAGAACGTCACGTCGGACCCGGGCAGGTTCAACGGCATGGTGGCGGCGCTGGTGAACGCCACCGCCGACTACGCCGCGCACAACTCCACCCGCCGGTACGCGTCCGGCGAGGCCGTCCTCGACAGGGAGTCGGAGTTCCCCAAGGTGTACAGCTGGGCGCAGTGCACGCCGGACCTGACGCCGGCGCAGTGCGGCGACTGCCTCGCCGCCATCATAGCCAAGCTGCCGAGGTTGTTCACGAACCGCATCGGCGGCAGGGTTCTTGGAGTCAGGTGCAGCTACCGGTACGAGGTAAACCCCTTCCTCAATGGCCTGGTGATGGTGCATCTGACTGCGCCACCGATTCCGACAGCATCACCGCCCGCCGCTGCCGCGGCGGCGGCCGGAGAAGGGAAAGATTACAATGTTCCTCGCTTGGTTCTAGCAATTTTGCTGCCTACTATAGCAGCTTTAGTGCTAATCAACATTCTAGTTTGGCTCTGCTTCTGGAGGAGGATGGAGAGGCTACGATCAGGAGCAACTCAGCCATATTCCAGCAACTCTGCTGAATCGGAGAATATTTCAAGTGTGGAGTCGATGCTTATCGACATTTCGACTTTACGAGCTGCTACAGGGTGTTTTGCAGAACGCAACAAGCTTGGCGAAGGTGGATTTGGTGCAGTGTACAAGGGTACTCTGCCTGATGGCGATGAAATAGCAGTGAAGAGATTATCGAAGAGTTCAGCACAAGGAGTGGGAGAGCTGAAGAACGAGCTCGCATTGGTTGCAAAGCTCCAGCACAAGAATCTTGTCAGGCTTGTCGGTGTCTGCCTGGAGCAAGAGGAGAGGCTTCTCGTCTATGAGTTTGTTCCCAACCGCAGCCTCGATCAGATCCTCTTTGACGCCGACAAGCGTCAACAGCTTGATTGGGGAAAGAGGTACAAGATCATCAACGGCATTGCTCGTGGCCTGCAATACCTCCACGAGGACTCGCAGCTCAAGGTAGTCCACCGTGATCTCAAAGCGAGCAACATCTTGCTCGACATGAACATGAACCCGAAGATCTCTGACTTTGGGCTCGCGAGGCTCTTCGGGCGAGACCAGACGCAGGGGGTCACCAACCTCGTCATCGGCACATAG
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| Protein seq | MAHRAGCLSMLLTAAVVLLALAPRGAAYPWQVCGTTGNFTANSTYQANLDAVAAALPRNISSSPDLFATAMVGAVPEQVSALALCRGDANATECSGCLATAFQDVQNMCAYDKDAAIYYDPCILYYSNVPFLSSVDNAASTSRVNLQNVTSDPGRFNGMVAALVNATADYAAHNSTRRYASGEAVLDRESEFPKVYSWAQCTPDLTPAQCGDCLAAIIAKLPRLFTNRIGGRVLGVRCSYRYEVNPFLNGLVMVHLTAPPIPTASPPAAAAAAAGEGKDYNVPRLVLAILLPTIAALVLINILVWLCFWRRMERLRSGATQPYSSNSAESENISSVESMLIDISTLRAATGCFAERNKLGEGGFGAVYKGTLPDGDEIAVKRLSKSSAQGVGELKNELALVAKLQHKNLVRLVGVCLEQEERLLVYEFVPNRSLDQILFDADKRQQLDWGKRYKIINGIARGLQYLHEDSQLKVVHRDLKASNILLDMNMNPKISDFGLARLFGRDQTQGVTNLVIGT
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.061999 | 0.0 | 0.229390 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0537500 | RBH | 0.113714 | 0.0 | 0.497282 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35370 | SBH | 0.198939 | 0.067711 | 0.061764 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0537500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0018000 | RBH | 0.0 | 3.211792 | 0.370232 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017890 | RBH | 0.0 | 0.0 | 0.145151 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017870 | RBH | 0.000000 | 1.560549 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017790 | RBH | 0.0 | 0.066649 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017890 | RBH | 0.0 | 1.607588 | 3.887622 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0343800 | RBH | 0.286414 | 7.1279885 | 0.537814 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018380 | RBH | 0.0 | 0.444536 | 0.233050 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358700 | RBH | 1.058621 | 6.388328 | 3.1335275 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017630 | RBH | 0.000000 | 0.992036 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017790 | SBH | 0.0 | 7.412187 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017730 | RBH | 0.0 | 14.414779 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018010 | RBH | 0.0 | 0.364644 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017800 | RBH | 0.0 | 1.935931 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017770 | RBH | 0.000000 | 1.230311 | 0.610493 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017640 | RBH | 0.000000 | 3.718342 | 0.000000 |
