Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0027350 | OGI:06080980 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:30066769-30071661 | ||||||||
| Gene Symbol | RLCK215, OsRLCK215 | ||||||||||
| DNA seq | cggcttcggctccatcgcggaggaaaccgagatggccgccgcggcgccgtgctcatggacttccgccgctgtgttcatggctgccgtattcatgtcattgccgcggcatcctcctgcaagaagacgccagcgtttgtggccttctaccagaaggcctcgccggagacggacgaggtggctcttgagtcttggcaggttcgaggcgttggaacaatgcatcgacgagtccaatagcagctactccaatgtgttcaggagcattcttcagacaagggttgcgctgctcaatattcagacaaggattggaacttggaagcaatgtattcctcccaaggagattttgttccaacccggagatgattggagttgcttcttactgatgattggagtactagattatcagtggcttcttttcactgatgattgaatatactgcaatgagattttttttccttcgtcacaaagagtactcctaatgaagattggcacaattgtgaattgggagaactatgtggggggtctgtaatgtgaatgtccaagccaatatgtaatctgcggagtgtgcattgtatctgtgaccacttgaattatgagcaggtgaataaaaccaagaagatgcagatgccatcaatcaacagccaattgtcaaagagatgctatgtgtggtaacagagtgctgaatttggtctgaacttatctctgaattttaccaaatgttctttctgaatttagtccagcccgaccttctcactgaatttgaccatatgttcaacatttatgtcgaatgtgcactaatgagcagcatacatgcattcaagtactccagccattaattatactccagttcacatattgcacagtttttcagaaatcttcagaaaccatcaattatatgtacaaaaatcttcagaattactccaatggagtaattaaacagtaagtatctctagaggaagaacaagttcaccaagactgaagaatactagcactgtatcagaaaatggacaataacaaggttatggcttgactgaatctgaatatatcaacttgactgaatcctcttatatcggaggaggcggggcagcggtagcatgggggagatgacgatcgagtcggcatcgaggaagacagcagcgccgcgctgggcagcacaaggaagaagtgcaccgcgccacgggttcctacagctggtggttgtttttttttttctcaaatcaaatctctggttcaacaatgatgcgaactctggttgaaaccggagctgaacttgtgatggttatgtctatcgccttgcttgagtgaccaatatatgtcgatgacctgtcaggactggcacctccatgagtaagctcagttggctcctttggatctgatagcattatgctttcagagtcaagcattgcagtaacatctgtcatggtgggccgatcggctggatcttcctgagcacaaagaagcgccacctgcgtgcatcgcattatcacggtgctttcatatccatcacacagtgctggatcaacgagctcttgcaaccttccgtctttccacatatgccatgcctgaaacatgttgcaatctgtcaagtgtgtaacacaaatctgtatgctagaagaagaccataagaaaaagtgtatcattgaactgtatcttcactcacatctcgaacgagatagccaacaatatccctttgtttctccattatgaaattctttcgtccactaatagtttctagaaccacgacaccgaagctaaatacatctgtcttaagtgaataaaggccttgagatgcatactctggagctatgtaaccactggaaatagatatcacaaggcatgagaaaactggaacatatatgtaacagtgcaccattcgttatattttgttcagctccgtacctggttcccacgactctctttgtacgctcttctgctacatctgaaaccagtgttaccgccgatccaaaatcaccaatctttgggttcatgtcatggtctaagaggatgttacttggtttcaagtctctatgtacaatccaacagtgcttgtgcaggtaaagaagcccctcagctagccctttaattatctgaaatcgcttggaccaatttagcaatgcccccttcgttttatctgtggaatgtttgcacaatacatacacttgagagaaaatagtactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttaatgaatctaaacatgtttcacaatgtaagtcattctagcattttccacattcatattgatgttaatgaatctagcacatatgtcaatatgaatgtggaaaatgttagaatgacttacattgtgaaacggaggaagtaattgttacatgctgttctacatcaaattaacatagtttctaatcagttgttatcagaagcatagcaacattcaagtgatatccaactcccctttggtaagagttgttttacattcgcaagcatatttattagaaactgtattaggtctgattgcAaaaaataaaataaaggtcttgtgtgcaacttacggaagataatattgtgcaaactgcctttctgaatgtactcatatacaaggatcctttctttttcatggatgcaccaccccaataacctaattagattggtatgctgaatccttacaagctgcaattcacttttcaaatcaaatattgctgtatcagcatcaaatgtctttatggcaactgtaagtccatcaagcaagtgtctgcaatggagttaccaatagctagagtttatgcggcattctctgatgatagaATatattttgtgtagacaaggagtatatatgtgtttatcaccttgtaaacagtaccaaatccaccctttccaagtattctcttctcggaaaaaccatctgtagcatccacaatctgaatgaaatcgaacttcctaaatcctgggtagttctcttcagtatggacaaaaagtttcagtactgcctcaatatccattattttttcttcttgcggttgcgggtccactgttactgaatgagggttaacactaaaatgagaaatgctcagcttcttcatacaataactaatgacttcatactgagcaaaagatataaaacttgtgttatcaaactccttttcgaaaaacttaacaagaatagacgtagaataatgagaaaaaatgatattcatcgtgcataagtatctatcaatgtgaaaatgttgataacttcagcatttgcttgcttcttctcgctgaagttttgcaaaatttttatcagctgaagctgatgttgcacattagctggtatcgtgttacgagtacttaatcatctttaagtctttaaccacattgcaatgttatatcctttcaaaaaacattgcaatgttataataagatccaaatacccaatacttggtcatgatcataagctataatgtctgactaaaatgaaatagggattttctctgtttgaacaaatttctaagtgtgcgctattacatttgttttgactcttatattcttgcttgtaagtccatttattaaagtgtgcctttttaaatcattattaacaaatgtaggaaatttgtagatgtagttacctactaatgattttcccccaatttcactaggtttggccgctccttgaacatgtaattcaatgaactccaatgctcttctttgaaacctaaaattgggcaaatatacccgttaatgtcaaaaccataaaacaaaggtcctgatttcgccctaaaaactggtatattcacaacagctgaactattaacatagataaatttgatatcgttacaattatgatcaattagtaatcaaccagatatcttcaataattctctggtgtttaaaataacccaatataagtggtgtttcctcatcaatatcaccattttgtcaagacgcgataaggacatcaggtccttgatttagcatataaagaaacattttttgagcaatcaattatgtactgaaacagtatatacacctaaccttgtgtgatggtctgaacagcttgggactacggcacgcaccccctcggttgcctgctagacaagaacagtgaaaactacagatatcattcacaggcaatttgcctgcatataaagtggacttttggaactaacagtggacaagtaaggaaaatcatatgaatgcagaactattaattactccatgtaaagttgtttgtatgaaagtcaaaatcggtatgtagtatgtaccccggtatccccaagtccccaattcaggtacaaatgcacaacagaaacattgacagaatcactttgaacaaatcacttcgatcagatgaatcatcataaaagaatctgcaatttctcattcatctccgtacgaccatacgccataatcttcagttttaagacgaaccaacgaaattatctaattactagcaaaagttgaaacaggcttactgtgacacgacgattgctgctgctgttatcgacgagagcgatgagagggatgaggcggatgtacatgtcgatctcgtgctgcgcggcgcggagctcgttggccatccgggcgccgaggagcaggcggtggaggtagccgcggtcctcctggcacgccgtgacgagcgcgtagcaccgccgcagcgcgccctggaggctggagctgctcgagggcccgcctggtggcctcccgccgcatcagctcggcgagctccagctcccgcagcaggccgccgacgagctccacgtgctgccccagccgccggcacgcgtcccggtggcagcgcgccgccagcgccgcctgcaccaccatggagaccagcccgagcgcgtcgacgccgaccagctgcgccacgttcgacgcctgcccaagcacgccccacaggctgctgctctccat
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| CDS seq | atggagagcagcagcctgtggggcgtgcttgggcaggcgtcgaacgtggcgcagctggtcggcgtcgacgcgctcgggctggtctccatggtggtgcaggcggcgctggcggcgcgctgccaccgggacgcgtgccggcggctggggcagcacgtggagctcgtcggcggcctgctgcgggagctggagctcgccgagctgatgcggcgggaggccaccaggcgggccctcgagcagctccagcctccagggcgcgctgcggcggtgctacgcgctcgtcacggcgaggaccgcggctacctccaccgcctgctcctcggcgcccggatggccaacgagctccgcgccgcgcagcacgagatcgacatgtacatccgcctcatccctctcatcgctctcgtcgataacagcagcagcaatcgtcgtgtcacagcaaccgagggggtgcgtgccgtagtcccaagctgttcagaccatcacacaaggtttcaaagaagagcattggagttcattgaattacatgttcaaggagcggccaaacctagtgaaattgggggaaaatcattagtagtaacagtggacccgcaaccgcaagaagaaaaaataatggatattgaggcagtactgaaactttttgtccatactgaagagaactacccaggatttaggaagttcgatttcattcagattgtggatgctacagatggtttttccgagaagagaatacttggaaagggtggatttggtactgtttacaagcttgtaaggattcagcataccaatctaattaggttattggggtggtgcatccatgaaaaagaaaggatccttgtatatgagtacattcagaaaggcagtttgcacaatattatcttccgtaaagacttgaaaccaagtaacatcctcttagaccatgacatgaacccaaagattggtgattttggatcggcggtaacactggtttcagatgtagcagaagagcgtacaaagagagtcgtgggaaccagtggttacatagctccagagtatgcatctcaaggcctttattcacttaagacagatgtatttagcttcggtgtcgtggttctagaaactattagtggacgaaagaatttcataatggagaaacaaagggatattgttggctatctcgttcgagatgcatggcatatgtggaaagacggaaggttgcaagagctcgttgatccagcactgtgtgatggatatgaaagcaccgtgataatgcgatgcacgcaggtggcgcttctttgtgctcaggaagatccagccgatcggcccaccatgacagatgttactgcaatgcttgactctgaaagcataatgctatcagatccaaaggagccaactgagcttactcatggaggtgccagtcctgacaggtcatcgacatatattggtcactcaagcaaggcgatagacataaccatcacaagttcagctccggtttcaaccagagttcgcatcattgttgaaccagagatttga
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| Protein seq | MESSSLWGVLGQASNVAQLVGVDALGLVSMVVQAALAARCHRDACRRLGQHVELVGGLLRELELAELMRREATRRALEQLQPPGRAAAVLRARHGEDRGYLHRLLLGARMANELRAAQHEIDMYIRLIPLIALVDNSSSNRRVTATEGVRAVVPSCSDHHTRFQRRALEFIELHVQGAAKPSEIGGKSLVVTVDPQPQEEKIMDIEAVLKLFVHTEENYPGFRKFDFIQIVDATDGFSEKRILGKGGFGTVYKLVRIQHTNLIRLLGWCIHEKERILVYEYIQKGSLHNIIFRKDLKPSNILLDHDMNPKIGDFGSAVTLVSDVAEERTKRVVGTSGYIAPEYASQGLYSLKTDVFSFGVVVLETISGRKNFIMEKQRDIVGYLVRDAWHMWKDGRLQELVDPALCDGYESTVIMRCTQVALLCAQEDPADRPTMTDVTAMLDSESIMLSDPKEPTELTHGGASPDRSSTYIGHSSKAIDITITSSAPVSTRVRIIVEPEI |
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| Function | Putative cysteine-rich receptor-like protein kinase 23 [UniProtKB/Swiss-Prot:O65482] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0027350 | OsLiXu_06g0027350.01 | Chr06 | 30066769 | 30071661 | - | NAM | ||
| CDS seq | atggagagcagcagcctgtggggcgtgcttgggcaggcgtcgaacgtggcgcagctggtcggcgtcgacgcgctcgggctggtctccatggtggtgcaggcggcgctggcggcgcgctgccaccgggacgcgtgccggcggctggggcagcacgtggagctcgtcggcggcctgctgcgggagctggagctcgccgagctgatgcggcgggaggccaccaggcgggccctcgagcagctccagcctccagggcgcgctgcggcggtgctacgcgctcgtcacggcgaggaccgcggctacctccaccgcctgctcctcggcgcccggatggccaacgagctccgcgccgcgcagcacgagatcgacatgtacatccgcctcatccctctcatcgctctcgtcgataacagcagcagcaatcgtcgtgtcacagcaaccgagggggtgcgtgccgtagtcccaagctgttcagaccatcacacaaggtttcaaagaagagcattggagttcattgaattacatgttcaaggagcggccaaacctagtgaaattgggggaaaatcattagtagtaacagtggacccgcaaccgcaagaagaaaaaataatggatattgaggcagtactgaaactttttgtccatactgaagagaactacccaggatttaggaagttcgatttcattcagattgtggatgctacagatggtttttccgagaagagaatacttggaaagggtggatttggtactgtttacaagcttgtaaggattcagcataccaatctaattaggttattggggtggtgcatccatgaaaaagaaaggatccttgtatatgagtacattcagaaaggcagtttgcacaatattatcttccgtaaagacttgaaaccaagtaacatcctcttagaccatgacatgaacccaaagattggtgattttggatcggcggtaacactggtttcagatgtagcagaagagcgtacaaagagagtcgtgggaaccagtggttacatagctccagagtatgcatctcaaggcctttattcacttaagacagatgtatttagcttcggtgtcgtggttctagaaactattagtggacgaaagaatttcataatggagaaacaaagggatattgttggctatctcgttcgagatgcatggcatatgtggaaagacggaaggttgcaagagctcgttgatccagcactgtgtgatggatatgaaagcaccgtgataatgcgatgcacgcaggtggcgcttctttgtgctcaggaagatccagccgatcggcccaccatgacagatgttactgcaatgcttgactctgaaagcataatgctatcagatccaaaggagccaactgagcttactcatggaggtgccagtcctgacaggtcatcgacatatattggtcactcaagcaaggcgatagacataaccatcacaagttcagctccggtttcaaccagagttcgcatcattgttgaaccagagatttga
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| Protein seq | MESSSLWGVLGQASNVAQLVGVDALGLVSMVVQAALAARCHRDACRRLGQHVELVGGLLRELELAELMRREATRRALEQLQPPGRAAAVLRARHGEDRGYLHRLLLGARMANELRAAQHEIDMYIRLIPLIALVDNSSSNRRVTATEGVRAVVPSCSDHHTRFQRRALEFIELHVQGAAKPSEIGGKSLVVTVDPQPQEEKIMDIEAVLKLFVHTEENYPGFRKFDFIQIVDATDGFSEKRILGKGGFGTVYKLVRIQHTNLIRLLGWCIHEKERILVYEYIQKGSLHNIIFRKDLKPSNILLDHDMNPKIGDFGSAVTLVSDVAEERTKRVVGTSGYIAPEYASQGLYSLKTDVFSFGVVVLETISGRKNFIMEKQRDIVGYLVRDAWHMWKDGRLQELVDPALCDGYESTVIMRCTQVALLCAQEDPADRPTMTDVTAMLDSESIMLSDPKEPTELTHGGASPDRSSTYIGHSSKAIDITITSSAPVSTRVRIIVEPEI
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.062501 | 0.058065 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0690200 | RBH | 0.606404 | 0.363751 | 0.277930 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g47530 | RBH | 0.354102 | 0.213662 | 0.050931 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0690200 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0027100 | RBH | 0.000000 | 9.286549 | 0.659674 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0026900 | RBH | 0.000000 | 1.031322 | 0.220899 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0027090 | RBH | 0.0 | 0.0 | 1.701716 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0026660 | RBH | 0.022067 | 0.042817 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0027130 | RBH | 1.996305 | 0.000000 | 1.860481 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0452600 | RBH | 0.196137 | 6.4407735 | 1.5464705 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0026540 | RBH | 0.000000 | 0.075801 | 0.042682 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0434700 | RBH | 0.982391 | 14.224267 | 3.1795545 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0027010 | RBH | 0.028776 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0027090 | RBH | 0.094665 | 1.774630 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0026700 | RBH | 0.000000 | 1.364609 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0027540 | RBH | 0.476786 | 0.370502 | 0.119095 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0026960 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G026860 | RBH | 0.000000 | 0.000000 | 0.380733 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0026950 | RBH | 0.000000 | 12.618872 | 0.863635 |
