Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0012010 | OGI:06029660 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:10143818-10152321 | ||||||||
| Gene Symbol | OsCGT, CGT, UGT | ||||||||||
| DNA seq | ccaagcagcagcaggacgcacacggcacacctactcccgcttcacatcgccaggtgttcgaccgaggccaccaccggcaatgccgagctctggcgacgcggcgggcaggcggccgcatgtggtgctcatcccgagcgccggcatgggccacctcgtccccttcggccgcctcgccgtggcgctgtcctccggccacggctgcgacgtctccctcgtcacggtgctccccaccgtgtccaccgcggagtcgaagcacctcgacgcgctgttcgacgcgttcccggcggtgcggcggctcgacttcgagctcgcgccgttcgacgcgtccgagttccccggcgccgacccgttcttcctccggttcgaggccatgcggcggtcggcgccgctcctcggcccgctcctcaccggcgccggcgcgtcggcgctcgccacggacatcgcgctgacatccgtcgtcatacccgtggcgaaggagcagggcctcccgtgccacatcctcttcaccgcctccgccgcgatgctctccctctgcgcctacttccccacatacctcgacgccaacgctggcggcggcggcggcgtcggcgacgtcgacatccccggcgtgtaccgcatccccaaggcctccatcccgcaggcgctgcacgaccccaaccacctcttcacccgccagttcgtcgccaacggccggagcctcacgagcgccgccggcatcctcgtcaacacgttcgacgccttggagccggaggccgtcgcggccctgcagcagggcaaggtcgcctccggcttcccgccggtgttcgccgtggggccacttctcccggcgagcaaccaggcgaaagatccgcaggcgaactacatggagtggctcgacgcgcagccggcgcggtcggtggtgtacgtgagcttcggcagccggaaggccatctcaagggagcagctcagggagctcgccgccgggctggagggcagcggccaccggttcctgtgggtggtgaagagcaccgtcgtggacagggacgacgccgccgagctcggcgagctgctcggcgaggggttcttggagcgggtggagaagcgaggcctcgtcaccaaggcatgggtggatcaggaagaggtcctgaagcacgagtccgtggcgctgttcgtgagccactgcggctggaactcggtgacggaggcggcggcgagcggcgtcccggtgctggcgctgccgaggttcggcgaccagcgggtgaactccggcgtggtggcgcgcgccgggctcggcgtgtgggcggacacctggagctgggagggggaggccggggtgatcggcgcggaggagatatcggagaaggtgaaggcggcgatggcggacgaggcgttgcggatgaaggcggcgagcctcgccgaggccgccgcgaaggccgtcgccggcggtggatcgagccaccgttgtctggccgagttcgcgcggctgtgccaagggggaacatgtcgcactaattgagtactgagacatgggttctaatttaaataattcggatggaatccttgttacagattttaaattggaataagaaatgaagccatatgaaatttggaagaattttaaatttaatcagtggatatgttttagtgaggttaaatctataaatagtaaagagtaaattgcattggtggtatacaaacttattaggtggatacaatttaatacataaacttgtaaaatgcttatttcagtacacgaatttgtctagttcgtgcgaacgaggaccaaaatagcttggcaatgttaatttatgatgctgattaggatgtgacgtgcatacgcatagtgagtatgtataagacatgtaatatttataaattttgtcttaactttatccttcacaatgaaaataacgaatctcatatgtttctaacccttataccagttctaagttttttaatctttctgatttttattgaataggtatgtctaatggcaaccttcttagatatatgtttacatagtatcctaatcaacccctaaattaataagattagccatgtagtgtccttatcggcttcctccgcacgcacgtagacaaattcatgcactaaaatgagcattttacaagttcgtgcactagattacacccacctgacaaatcgtgtaccggcgatgcaatttactcaatagagtaaaataatgttgtttctctagggatatgatcttagggctattcgttttagaggaaaacgaaaggatttagattaatcactatgagtatcatttggttttcaggaatgtacctacaggagaatcaaagaaaaatatcctttcctacatgttatagagtgaaaacttggaaatattttttatccactcaaacatctcagaaaattcctatagattgaagtgtgcatgtatttttattcttttacttttcctattcttatgtgttgggattcttccaaaaacaaataggcccttatcatgaacctttcaaatatcgagaatatattttgagatggagttaatagcaacttgctgggagaaggattgccgtacataccacgtgacagaaacatgacaaatcgccttgaaagaggaaaaaaaacaaattgggggggttctagatttggtaagtattgacttttgagatagagatgggtactccctccgtttcacaggtaagtcattctagtatttttcacaattatattgatgttaatgaatttatatagatatatatgtctagatttattaatatcaatatgaatgtaaaaaatgctagaatgacttacattgtgaaacggagggagtatattactgtgatgtaaggtctgattgtcatatgctgatcacatgtataaacatctttttcttgctattgtgatttatttggtataagcctgaaaagtacgaactcgttttatttagttacacttttatatgtgcgtttttgtaatgtacatttttcatgtatgagcttattttcctagtgttatgacaattatgtacggttcaatggtacttatttctaccatgtactaaggataataaattcaccaatagtacagccataaattcaacaagcatttcatttcacaaggacaaattatcaaggtcaatccggatcctagcagggtcgttttcatcttgtaagtggttgtaccacacacaaatcgatataagtataggtaaatattatcaacggtgataaaaattgtatttcacatgttttcaattatataagatcaataaccataaaataagatgacaggttgcggtcatgtcacctgtcgagctcattgctggggggaaagtatcacgtgcaataggagcactcagtgggagaatgcaatcactaaagtaggccgtccgatctgcaatctacgtcttggattgaggcgggatgagacccgagtcactttaggacatttgcagataccccccctgacaaccacagtgcattttgcagggaaccccacattattcacctccttctaaatagcagtccaaatgttcaatcgatccctttctattcctccttccaatcagagtgttaagtatgtagcatttttcctcatctactctgtgccgccatgatctctgacaagttgctgaacaatggtccatgaaatgtgtaagagaaatgtatatccagatgtatttatatgtatttagacgttttttagatgtatttagatgtatgcagcaactcgacactgtatatccaatgacggttgtgacggttggaatggttggaaataccctccagccgtcattgggagctaatcaacaccgtccagccacaaccctgcatccaacggtgccaggggggttcggccgaaccaggggccggcccaactagcccaggttttggttggcggcctcctctgttgattctcttcatagacttgtaaattttggcctaattcatcatgccaattctgagttcttggcccattcatacataagtctgactctcaacatcgtccgattgatttatcgtctgattcgatgtcgattctcctccactttatgattattctctgcaaaagtttagtgaaccaaatactagtgaaatattattattctaacatgtatatgcattgcaagcataactagttctcctctattttggtaatattgacggtcgaaactgatcgataacaaccgtcaacaggagccatggccgaagagctcaggggagatggatacgtcgctggtgggctcaggcgggctcgagggagacggatctatcatcggtgggctcgggggaaccagattcgtcgccggcgaggtcgtgggaggcggatccatcgccggagagcctgggggaggccgatccgttgccggcaagctcggtggaggtggatccatcaccgacgggctcgggggaggtcgatccaccgtcggagatattgggggacgtcgtcggcgagcttaggggtcctacataattgtctttccccttatctcactagggttgaattttaaccccaaactgggcatgtttagttttcaaacaaaaattttcacactgtcatatcgaatgtttggacatataaatggagagtattaaatgtagaaaaaaaaccaattacacagttcactaggaaattgcgaaacgaatcttttaagcctaattcccaccatgatttgacaatgtggtggtaaagtaaatatttgctaatgacggataaattaggcttaataaattcgtcccgcagtttcttggcggaatctgcaatttgctttgttattagattacgtttaatacttcaaatgtgtgtctgtatatttgatgtgaaagtcctaacaggcgatcgatcgctgggcatgatcggtccccctccccacatgatttccgttttgacattgcattactttcctgctttagtaaatttatacatctaaactttatacacattaagtttacgcatctaaaatttatacatctaaagtttttacacttaaaatttgtaggcccaaagtttatatacctgatttaaatttgtatttagattcaaatattttttttatatagaatatttatatacataaagtttatatgtgggaagtttacgatataaagtatatatataagtgtaaagtctatgcacatgaataaaatatattagatttgttttctatttttttaactttttttgttaaaaaaatgatgcagtaagtagagaataaagggaaggagccgtgttaggggagggagagtgatcgctcacagtgatcacccaccgattagcaccaccctatccgatgtgacatacaggggcaaaaaaaattttcaactaaacaaggccttaattgtaagccctgatctcatggtgcattaaatgcaacattttcacttcggtcagcaaaggcaattgttgggtgtgtttggatctttaaaaagagcagttccagcattagttaccaagtagaggcatttgataaaaaggagaaaaaaaccctaaatcagttatgcattactcactttgtttttgttttagattataagtcattttaattatggtcaaagtcaaactgttttaaatttgaccaagtttatagaaaaatatagtaacattttcaactcaaaacaaatatattatgaaaatataatcagttataaatttagtaaaactaatttttggtgttgtaaatattactatatttatctacaaatttagttaaatttatagtagtttgacttttactaaagttaaaaaaaagaatacttatttggtgaccccatttatgtaatttgtttgccgtaaagaactctacctaagcaatcaagatgacaagatcgttccaactctcttttcttggcgaacaaactttatgcttattatgcatgctcgatttgatgacaccaaacctagccgcctctgtggaagtcattccgttgtcaaaataatccaaaaattagtgttaggtagcccccaaaagtaaagataaactgtactacatatacaaatctacccacaccattagggaagaaaattcggtaggactgaagtcttatgcttatcagaaagactttgtttcaaaacgtgacacgtgttccctaccgatctcaaagcaatctctcagttctcccctttcggttcggctgcacagataattcctccatttgcgcagatgaaacgacgcaggagtgattcctccgtccagctcagtccggcggcaagctctcgctcatagagaacaggagatcggcgggaggcgattcctcactcccattcggcgtctcgacgagctcgcacacatggagggcgacgcggcgcggtgcggcgtccattcaaccttcttgttcagcgtagcagcaaggtcacactggtgggggcgaagcggtggcttgcaagaggtcagaaagctcctcaccctacggtcagactcaactgctcgatgtactcaactattcaagcagtcaagcttgctacaaattacttcatctagaccgttggagttcgccactgctccccaatgtcctgctatgagctgctcggcagaccaaggaagggcaagctcccacgtgctcctctgtgcaagctcgttaggagcattggggctgcggtgagccgctgggcaaacaaggaatgggagaacgctcgtgaggcgtgaggttgaagatgaggatggaattgctttaagattggtgcccacacgtgtcgcgcttggaaacgaagtctttcctgttagcgtaggacctccgtcttaccaaattttcttcccacaattagtactccctccgtcctataatataagggattttgagtttttattacaacgtttgaccactcgtcttattcaaattttttttgcaaatgtaaaaaacgaaaaattatgcttaaagtactgtagataataaagtaagtcacaaataaaataaataataattttaaaattttttaaataagacgagtggtcaaacgttgaaaacaaaaactcaaaatcccttataatataggacggagggagtagcattaagcactaagcatcaaacaacagctgaactgttgagtcccaagaagtcaagaacgcaaggtgttcgaccatgtgttcggcggcaacacccaactccggcgacgtccgtgctacacgaggatcaccgcggccgcacgtcgtcctcctaccaagcgccggcatgggccacctggttcccttcacccgcctcgccgccgcgctgtgctccggccacggctgcgacgtgtccctcgtcgcggccgtgcccaccgtgtcgtcggccgaggcacgccacctcgccgcgcacttcgccgcgttccccgccgttcgacggctcgagctcgacctcgcgtcgctcgacgtgtccgagttcgccggcgccgacccgttctacgtccgttacgaggccatccgccggtcggcgccgctcctggcgccgctcctcgccggcggcgcgtcgtcggcggcatcggcgctggtcgctgacatcgccttggcctccgtggtgataccggtggccagggagctccgcctcccgtgctacgtcttcttcaccgcctccgccacgatgttctccttcctcgcctacctgcccacctacctcgacgccaacgccggcggcgggcacgccatcggcgacgtcgacgtCcccggcgtgtgccgcgttccgatgtcatccgtcccgcaggcgctgcacgacccggacgacatcttcacccggcagttcatcgcgaacgcccgcagcctcgcggacgcggacggcctcgtcgtcaacgcgttcgacgccctggagccggaggccgtcgcggcgttgcggcagggcaccgtcgccgccgggttaccgccggtgttcgccgtggggccactcagcccggcgcccattccggcgaaagattcaggcagctacttgccgtggctcgacgcgcagccggcgcggtcggtggtgtacgtcagcttcggcagccgcaaggcgttgccgagagaccagctgagcgagctcgccgccgggctggaagcgagcggccaccgtttcttgtgggtggtgaagggcgccgtcgtggacagagacgacgccagcgagctcaccgacctgctcggagaagccttcctgcagagaatccatggccgtggcctcgtgaccatggcgtgggtgcgtcaagaggaggtcctgaaccacccctccgtcggtctgttcatcagccactgcgggtggaactcggtgacggaggcggcggcgagcggcgtgccggtggtggcgtggccgaggttcgccgaccagcgggtgaacgccggcgtggtggcgcgcgcggggatcggggcgtgggcggacacctggagctgggagggggaggaggatgatggggtggtgagcgcggaggacatcgcggggaaggtgaggtcggcgatggccgacgagggtgtaaggaaggcggcggcgagcgtccgtgaggccgcggcgagggcggtggccgccggagggaggagctaccggagcttggcggagttggtgcgacggtgccgtgacgggcttgttatcacgaacggaacgtga
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| CDS seq | atgccgagctctggcgacgcggcgggcaggcggccgcatgtggtgctcatcccgagcgccggcatgggccacctcgtccccttcggccgcctcgccgtggcgctgtcctccggccacggctgcgacgtctccctcgtcacggtgctccccaccgtgtccaccgcggagtcgaagcacctcgacgcgctgttcgacgcgttcccggcggtgcggcggctcgacttcgagctcgcgccgttcgacgcgtccgagttccccggcgccgacccgttcttcctccggttcgaggccatgcggcggtcggcgccgctcctcggcccgctcctcaccggcgccggcgcgtcggcgctcgccacggacatcgcgctgacatccgtcgtcatacccgtggcgaaggagcagggcctcccgtgccacatcctcttcaccgcctccgccgcgatgctctccctctgcgcctacttccccacatacctcgacgccaacgctggcggcggcggcggcgtcggcgacgtcgacatccccggcgtgtaccgcatccccaaggcctccatcccgcaggcgctgcacgaccccaaccacctcttcacccgccagttcgtcgccaacggccggagcctcacgagcgccgccggcatcctcgtcaacacgttcgacgccttggagccggaggccgtcgcggccctgcagcagggcaaggtcgcctccggcttcccgccggtgttcgccgtggggccacttctcccggcgagcaaccaggcgaaagatccgcaggcgaactacatggagtggctcgacgcgcagccggcgcggtcggtggtgtacgtgagcttcggcagccggaaggccatctcaagggagcagctcagggagctcgccgccgggctggagggcagcggccaccggttcctgtgggtggtgaagagcaccgtcgtggacagggacgacgccgccgagctcggcgagctgctcggcgaggggttcttggagcgggtggagaagcgaggcctcgtcaccaaggcatgggtggatcaggaagaggtcctgaagcacgagtccgtggcgctgttcgtgagccactgcggctggaactcggtgacggaggcggcggcgagcggcgtcccggtgctggcgctgccgaggttcggcgaccagcgggtgaactccggcgtggtggcgcgcgccgggctcggcgtgtgggcggacacctggagctgggagggggaggccggggtgatcggcgcggaggagatatcggagaaggtgaaggcggcgatggcggacgaggcgttgcggatgaaggcggcgagcctcgccgaggccgccgcgaaggccgtcgccggcggtggatcgagccaccgatcaccgcggccgcacgtcgtcctcctaccaagcgccggcatgggccacctggttcccttcacccgcctcgccgccgcgctgtgctccggccacggctgcgacgtgtccctcgtcgcggccgtgcccaccgtgtcgtcggccgaggcacgccacctcgccgcgcacttcgccgcgttccccgccgttcgacggctcgagctcgacctcgcgtcgctcgacgtgtccgagttcgccggcgccgacccgttctacgtccgttacgaggccatccgccggtcggcgccgctcctggcgccgctcctcgccggcggcgcgtcgtcggcggcatcggcgctggtcgctgacatcgccttggcctccgtggtgataccggtggccagggagctccgcctcccgtgctacgtcttcttcaccgcctccgccacgatgttctccttcctcgcctacctgcccacctacctcgacgccaacgccggcggcgggcacgccatcggcgacgtcgacgtCcccggcgtgtgccgcgttccgatgtcatccgtcccgcaggcgctgcacgacccggacgacatcttcacccggcagttcatcgcgaacgcccgcagcctcgcggacgcggacggcctcgtcgtcaacgcgttcgacgccctggagccggaggccgtcgcggcgttgcggcagggcaccgtcgccgccgggttaccgccggtgttcgccgtggggccactcagcccggcgcccattccggcgaaagattcaggcagctacttgccgtggctcgacgcgcagccggcgcggtcggtggtgtacgtcagcttcggcagccgcaaggcgttgccgagagaccagctgagcgagctcgccgccgggctggaagcgagcggccaccgtttcttgtgggtggtgaagggcgccgtcgtggacagagacgacgccagcgagctcaccgacctgctcggagaagccttcctgcagagaatccatggccgtggcctcgtgaccatggcgtgggtgcgtcaagaggaggtcctgaaccacccctccgtcggtctgttcatcagccactgcgggtggaactcggtgacggaggcggcggcgagcggcgtgccggtggtggcgtggccgaggttcgccgaccagcgggtgaacgccggcgtggtggcgcgcgcggggatcggggcgtgggcggacacctggagctgggagggggaggaggatgatggggtggtgagcgcggaggacatcgcggggaaggtgaggtcggcgatggccgacgagggtgtaaggaaggcggcggcgagcgtccgtgaggccgcggcgagggcggtggccgccggagggaggagctaccggagcttggcggagttggtgcgacggtgccgtgacgggcttgttatcacgaacggaacgtga
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| Protein seq | MPSSGDAAGRRPHVVLIPSAGMGHLVPFGRLAVALSSGHGCDVSLVTVLPTVSTAESKHLDALFDAFPAVRRLDFELAPFDASEFPGADPFFLRFEAMRRSAPLLGPLLTGAGASALATDIALTSVVIPVAKEQGLPCHILFTASAAMLSLCAYFPTYLDANAGGGGGVGDVDIPGVYRIPKASIPQALHDPNHLFTRQFVANGRSLTSAAGILVNTFDALEPEAVAALQQGKVASGFPPVFAVGPLLPASNQAKDPQANYMEWLDAQPARSVVYVSFGSRKAISREQLRELAAGLEGSGHRFLWVVKSTVVDRDDAAELGELLGEGFLERVEKRGLVTKAWVDQEEVLKHESVALFVSHCGWNSVTEAAASGVPVLALPRFGDQRVNSGVVARAGLGVWADTWSWEGEAGVIGAEEISEKVKAAMADEALRMKAASLAEAAAKAVAGGGSSHRSPRPHVVLLPSAGMGHLVPFTRLAAALCSGHGCDVSLVAAVPTVSSAEARHLAAHFAAFPAVRRLELDLASLDVSEFAGADPFYVRYEAIRRSAPLLAPLLAGGASSAASALVADIALASVVIPVARELRLPCYVFFTASATMFSFLAYLPTYLDANAGGGHAIGDVDVPGVCRVPMSSVPQALHDPDDIFTRQFIANARSLADADGLVVNAFDALEPEAVAALRQGTVAAGLPPVFAVGPLSPAPIPAKDSGSYLPWLDAQPARSVVYVSFGSRKALPRDQLSELAAGLEASGHRFLWVVKGAVVDRDDASELTDLLGEAFLQRIHGRGLVTMAWVRQEEVLNHPSVGLFISHCGWNSVTEAAASGVPVVAWPRFADQRVNAGVVARAGIGAWADTWSWEGEEDDGVVSAEDIAGKVRSAMADEGVRKAAASVREAAARAVAAGGRSYRSLAELVRRCRDGLVITNGT |
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| Function | UDP-glucose:2-hydroxyflavanone C-glucosyltransferase [UniProtKB/Swiss-Prot:C3W7B0] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0012010 | OsLiXu_06g0012010.01 | Chr06 | 10143897 | 10152321 | + | NAM | ||
| CDS seq | atgccgagctctggcgacgcggcgggcaggcggccgcatgtggtgctcatcccgagcgccggcatgggccacctcgtccccttcggccgcctcgccgtggcgctgtcctccggccacggctgcgacgtctccctcgtcacggtgctccccaccgtgtccaccgcggagtcgaagcacctcgacgcgctgttcgacgcgttcccggcggtgcggcggctcgacttcgagctcgcgccgttcgacgcgtccgagttccccggcgccgacccgttcttcctccggttcgaggccatgcggcggtcggcgccgctcctcggcccgctcctcaccggcgccggcgcgtcggcgctcgccacggacatcgcgctgacatccgtcgtcatacccgtggcgaaggagcagggcctcccgtgccacatcctcttcaccgcctccgccgcgatgctctccctctgcgcctacttccccacatacctcgacgccaacgctggcggcggcggcggcgtcggcgacgtcgacatccccggcgtgtaccgcatccccaaggcctccatcccgcaggcgctgcacgaccccaaccacctcttcacccgccagttcgtcgccaacggccggagcctcacgagcgccgccggcatcctcgtcaacacgttcgacgccttggagccggaggccgtcgcggccctgcagcagggcaaggtcgcctccggcttcccgccggtgttcgccgtggggccacttctcccggcgagcaaccaggcgaaagatccgcaggcgaactacatggagtggctcgacgcgcagccggcgcggtcggtggtgtacgtgagcttcggcagccggaaggccatctcaagggagcagctcagggagctcgccgccgggctggagggcagcggccaccggttcctgtgggtggtgaagagcaccgtcgtggacagggacgacgccgccgagctcggcgagctgctcggcgaggggttcttggagcgggtggagaagcgaggcctcgtcaccaaggcatgggtggatcaggaagaggtcctgaagcacgagtccgtggcgctgttcgtgagccactgcggctggaactcggtgacggaggcggcggcgagcggcgtcccggtgctggcgctgccgaggttcggcgaccagcgggtgaactccggcgtggtggcgcgcgccgggctcggcgtgtgggcggacacctggagctgggagggggaggccggggtgatcggcgcggaggagatatcggagaaggtgaaggcggcgatggcggacgaggcgttgcggatgaaggcggcgagcctcgccgaggccgccgcgaaggccgtcgccggcggtggatcgagccaccgatcaccgcggccgcacgtcgtcctcctaccaagcgccggcatgggccacctggttcccttcacccgcctcgccgccgcgctgtgctccggccacggctgcgacgtgtccctcgtcgcggccgtgcccaccgtgtcgtcggccgaggcacgccacctcgccgcgcacttcgccgcgttccccgccgttcgacggctcgagctcgacctcgcgtcgctcgacgtgtccgagttcgccggcgccgacccgttctacgtccgttacgaggccatccgccggtcggcgccgctcctggcgccgctcctcgccggcggcgcgtcgtcggcggcatcggcgctggtcgctgacatcgccttggcctccgtggtgataccggtggccagggagctccgcctcccgtgctacgtcttcttcaccgcctccgccacgatgttctccttcctcgcctacctgcccacctacctcgacgccaacgccggcggcgggcacgccatcggcgacgtcgacgtCcccggcgtgtgccgcgttccgatgtcatccgtcccgcaggcgctgcacgacccggacgacatcttcacccggcagttcatcgcgaacgcccgcagcctcgcggacgcggacggcctcgtcgtcaacgcgttcgacgccctggagccggaggccgtcgcggcgttgcggcagggcaccgtcgccgccgggttaccgccggtgttcgccgtggggccactcagcccggcgcccattccggcgaaagattcaggcagctacttgccgtggctcgacgcgcagccggcgcggtcggtggtgtacgtcagcttcggcagccgcaaggcgttgccgagagaccagctgagcgagctcgccgccgggctggaagcgagcggccaccgtttcttgtgggtggtgaagggcgccgtcgtggacagagacgacgccagcgagctcaccgacctgctcggagaagccttcctgcagagaatccatggccgtggcctcgtgaccatggcgtgggtgcgtcaagaggaggtcctgaaccacccctccgtcggtctgttcatcagccactgcgggtggaactcggtgacggaggcggcggcgagcggcgtgccggtggtggcgtggccgaggttcgccgaccagcgggtgaacgccggcgtggtggcgcgcgcggggatcggggcgtgggcggacacctggagctgggagggggaggaggatgatggggtggtgagcgcggaggacatcgcggggaaggtgaggtcggcgatggccgacgagggtgtaaggaaggcggcggcgagcgtccgtgaggccgcggcgagggcggtggccgccggagggaggagctaccggagcttggcggagttggtgcgacggtgccgtgacgggcttgttatcacgaacggaacgtga
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| Protein seq | MPSSGDAAGRRPHVVLIPSAGMGHLVPFGRLAVALSSGHGCDVSLVTVLPTVSTAESKHLDALFDAFPAVRRLDFELAPFDASEFPGADPFFLRFEAMRRSAPLLGPLLTGAGASALATDIALTSVVIPVAKEQGLPCHILFTASAAMLSLCAYFPTYLDANAGGGGGVGDVDIPGVYRIPKASIPQALHDPNHLFTRQFVANGRSLTSAAGILVNTFDALEPEAVAALQQGKVASGFPPVFAVGPLLPASNQAKDPQANYMEWLDAQPARSVVYVSFGSRKAISREQLRELAAGLEGSGHRFLWVVKSTVVDRDDAAELGELLGEGFLERVEKRGLVTKAWVDQEEVLKHESVALFVSHCGWNSVTEAAASGVPVLALPRFGDQRVNSGVVARAGLGVWADTWSWEGEAGVIGAEEISEKVKAAMADEALRMKAASLAEAAAKAVAGGGSSHRSPRPHVVLLPSAGMGHLVPFTRLAAALCSGHGCDVSLVAAVPTVSSAEARHLAAHFAAFPAVRRLELDLASLDVSEFAGADPFYVRYEAIRRSAPLLAPLLAGGASSAASALVADIALASVVIPVARELRLPCYVFFTASATMFSFLAYLPTYLDANAGGGHAIGDVDVPGVCRVPMSSVPQALHDPDDIFTRQFIANARSLADADGLVVNAFDALEPEAVAALRQGTVAAGLPPVFAVGPLSPAPIPAKDSGSYLPWLDAQPARSVVYVSFGSRKALPRDQLSELAAGLEASGHRFLWVVKGAVVDRDDASELTDLLGEAFLQRIHGRGLVTMAWVRQEEVLNHPSVGLFISHCGWNSVTEAAASGVPVVAWPRFADQRVNAGVVARAGIGAWADTWSWEGEEDDGVVSAEDIAGKVRSAMADEGVRKAAASVREAAARAVAAGGRSYRSLAELVRRCRDGLVITNGT
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0012010 | OsLiXu_06g0012010.02 | Chr06 | 10143818 | 10145560 | + | IsoSeq | ||
| CDS seq | aagcagcagcaggacgcacacggcacacctactcccgcttcacatcgccaggtgttcgaccgaggccaccaccggcaatgccgagctctggcgacgcggcgggcaggcggccgcatgtggtgctcatcccgagcgccggcatgggccacctcgtccccttcggccgcctcgccgtggcgctgtcctccggccacggctgcgacgtctccctcgtcacggtgctccccaccgtgtccaccgcggagtcgaagcacctcgacgcgctgttcgacgcgttcccggcggtgcggcggctcgacttcgagctcgcgccgttcgacgcgtccgagttccccggcgccgacccgttcttcctccggttcgaggccatgcggcggtcggcgccgctcctcggcccgctcctcaccggcgccggcgcgtcggcgctcgccacggacatcg
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| Protein seq | KQQQDAHGTPTPASHRQVFDRGHHRQCRALATRRAGGRMWCSSRAPAWATSSPSAASPWRCPPATAATSPSSRCSPPCPPRSRSTSTRCSTRSRRCGGSTSSSRRSTRPSSPAPTRSSSGSRPCGGRRRSSARSSPAPARRRSPRTS |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.528409 | 0.0 | 0.221502 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0288300 | RBH | 0.772118 | 0.950192 | 1.508470 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g18010 | RBH | 0.508948 | 0.622929 | 0.378494 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0288300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0011840 | RBH | 0.0 | 1.641109 | 0.396627 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0011720 | RBH | 0.0 | 0.0 | 0.415418 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0011780 | RBH | 0.220701 | 1.561251 | 0.927307 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0011830 | RBH | 0.0 | 0.293390 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0011860 | RBH | 1.695260 | 0.0 | 0.634186 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0171700 | RBH | 0.8353545 | 0.5568815 | 1.1938855 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0011370 | RBH | 0.0 | 0.134939 | 0.056991 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0168300 | RBH | 1.0882915 | 0.8078095 | 1.2010335 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0011940 | RBH | 0.109400 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0011800 | RBH | 0.018631 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0011640 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0031480 | RBH | 0.094140 | 0.0 | 0.117574 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0011660 | RBH | 0.259881 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G011580 | RBH | 0.0 | 1.891232 | 2.215013 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0011940 | RBH | 0.0 | 0.0 | 1.543142 |
