Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_06g0007550 | OGI:06015740 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr06:5582620-5583309 | ||||||||
| Gene Symbol | ERF119, OsERF#119, OsERF119, AP2/EREBP#104, AP2/EREBP104, DLN161, OsDLN161 | ||||||||||
| DNA seq | atggtgaagacggcggcgagcaatggcgcggcggcggcgaggcgcgtcggcggcggcggtgatgggaagagggcggcgtacaagggggtgaggatgaggagctgggggtcgtgggtgtcggagatcagggcgccgagccagaagacgcggatatggctgggatcctactccaccgccgaggcggcggcgcgcgcctacgacgccgcgctgctctgcctcaagggctccgccgccgccgacctcaacttccccgtccgcctcccgttcgacctccccgccgccgccatgtcgcccaagtccatccagcgcgtcgccgccgccgccgccgccaatgccaacgccaacgccagcagcagctgcagcgcggccgtcttcgccggcgtcgacgacagcggcggcgccagcgccagcgaggccagcacacctgcctgcagctccagcgatggtgccgcctcgccgtcgccggtgagctccccggagacggtcatcagcgacgtcgacgtggactacagcttgctcgccgacatcgaggcgttcttccagtctcccaagtgcatggagtacgccatgatggacccgtgcagcgcgttcttcgcgccgccgccgccgccggcgatggcgatggaggaggagtgcggctgggaggaggaaggcgacattgcgctctggagcttctcctctctggactga
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| CDS seq | atggtgaagacggcggcgagcaatggcgcggcggcggcgaggcgcgtcggcggcggcggtgatgggaagagggcggcgtacaagggggtgaggatgaggagctgggggtcgtgggtgtcggagatcagggcgccgagccagaagacgcggatatggctgggatcctactccaccgccgaggcggcggcgcgcgcctacgacgccgcgctgctctgcctcaagggctccgccgccgccgacctcaacttccccgtccgcctcccgttcgacctccccgccgccgccatgtcgcccaagtccatccagcgcgtcgccgccgccgccgccgccaatgccaacgccaacgccagcagcagctgcagcgcggccgtcttcgccggcgtcgacgacagcggcggcgccagcgccagcgaggccagcacacctgcctgcagctccagcgatggtgccgcctcgccgtcgccggtgagctccccggagacggtcatcagcgacgtcgacgtggactacagcttgctcgccgacatcgaggcgttcttccagtctcccaagtgcatggagtacgccatgatggacccgtgcagcgcgttcttcgcgccgccgccgccgccggcgatggcgatggaggaggagtgcggctgggaggaggaaggcgacattgcgctctggagcttctcctctctggactga
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| Protein seq | MVKTAASNGAAAARRVGGGGDGKRAAYKGVRMRSWGSWVSEIRAPSQKTRIWLGSYSTAEAAARAYDAALLCLKGSAAADLNFPVRLPFDLPAAAMSPKSIQRVAAAAAANANANASSSCSAAVFAGVDDSGGASASEASTPACSSSDGAASPSPVSSPETVISDVDVDYSLLADIEAFFQSPKCMEYAMMDPCSAFFAPPPPPAMAMEEECGWEEEGDIALWSFSSLD |
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| Function | Ethylene-responsive transcription factor ERF012 [UniProtKB/Swiss-Prot:Q9SFE4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_06g0007550 | OsLiXu_06g0007550.01 | Chr06 | 5582620 | 5583309 | + | NAM | ||
| CDS seq | atggtgaagacggcggcgagcaatggcgcggcggcggcgaggcgcgtcggcggcggcggtgatgggaagagggcggcgtacaagggggtgaggatgaggagctgggggtcgtgggtgtcggagatcagggcgccgagccagaagacgcggatatggctgggatcctactccaccgccgaggcggcggcgcgcgcctacgacgccgcgctgctctgcctcaagggctccgccgccgccgacctcaacttccccgtccgcctcccgttcgacctccccgccgccgccatgtcgcccaagtccatccagcgcgtcgccgccgccgccgccgccaatgccaacgccaacgccagcagcagctgcagcgcggccgtcttcgccggcgtcgacgacagcggcggcgccagcgccagcgaggccagcacacctgcctgcagctccagcgatggtgccgcctcgccgtcgccggtgagctccccggagacggtcatcagcgacgtcgacgtggactacagcttgctcgccgacatcgaggcgttcttccagtctcccaagtgcatggagtacgccatgatggacccgtgcagcgcgttcttcgcgccgccgccgccgccggcgatggcgatggaggaggagtgcggctgggaggaggaaggcgacattgcgctctggagcttctcctctctggactga
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| Protein seq | MVKTAASNGAAAARRVGGGGDGKRAAYKGVRMRSWGSWVSEIRAPSQKTRIWLGSYSTAEAAARAYDAALLCLKGSAAADLNFPVRLPFDLPAAAMSPKSIQRVAAAAAANANANASSSCSAAVFAGVDDSGGASASEASTPACSSSDGAASPSPVSSPETVISDVDVDYSLLADIEAFFQSPKCMEYAMMDPCSAFFAPPPPPAMAMEEECGWEEEGDIALWSFSSLD
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0166400 | SBH | 0.692589 | 1.494779 | 1.926731 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g10780 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0166400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0007580 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_06g0007420 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0007430 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0007500 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0007420 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0093700 | RBH | 0.237466 | 4.0570745 | 0.1138435 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0007210 | RBH | 0.0 | 0.144763 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0093800 | RBH | 0.7159035 | 1.095759 | 0.282781 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0007600 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0007480 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0007530 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0028720 | RBH | 0.000000 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0007390 | RBH | 0.0 | 1.208803 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G007290 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0007570 | RBH | 0.0 | 4.169880 | 0.0 |
