Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_05g0017360 | OGI:05055260 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr05:21371689-21374422 | ||||||||
| Gene Symbol | NAC87, ONAC087, ONAC87 | ||||||||||
| DNA seq | ttaattatttgttaagcatacggaatctatatatagaagatatgtttgctgatgataattaattgaactgagaatttatccttacagtacaatgtcctatatatatatattatcgtcaagtgttggtcatatatactactacttgacatatatggtatttctagagtggctgaagagtatatatatgtagcctacacactggtaattttcagaattaaccgtgaattaacagctaagaaaactggccactgttaaattctgaatatatatggctattgggattagcatctgcatcatcctgtcaggcctgcttaattaattttacttgggatcactaaaaccagaagaatcgtaatccctggccgtcgacgtgtcagggaccgagctccaatcccagagcctgtcggagacggcggccagcggcggcgagatcggcagcgtgccgagctgcggcatcagctgcgacggcggcaaggggaagtgatgatggcttccggcgacaatgtggttattaccgtaggcgccgccatggctgtggcccgcgagcagcgtgctgagctcgtcgatgtgcgtggagctactgccggcggcggcaagcagcgagtacgtggaggcggcggcgaggacggcggcgctctcggtcggcgccgccgccgccgacgtgtaggcggcggcgcacggcggccttgggggaggcggcggcatcagcagctgtgacgcattactgttgcgcgtcgtggccgatgctggcagcgacggcggcggcggcgccgccgccgccgccgccgagcactcgccttggagcagctggtggaaactggtgtgctgctgcgccgtcgtcgtcgacgacgacgacggtgacggcctatgccggcaagccggtaagccggcagcagtgttgttgccggagtgctgctccggcggcctcgccgccgccgacgacgacgacgcttgcacgttgccggcggggcgctggtggtggccgtggccgtcgtcgatgccggagcgcttgtagacgcggcagagcgagatctcagactgcatgatcatcagtagagagtagagacaatgtgatgagaattaataatggagattcatgcattggcctgctttaatttcttgcaaattaagaggaagaaattaagttaatgaaatattgaaatatcccctaatccaaagtaatttaagcaatgtctacaaaatttgtcagcagaagctttctcactggacatttcaaagccaaagaaaaacttaagaaattaccagcatcagatcgaaagagaaagatgcagtcacggataattgtagtgtagtaactatagcctagtaggattgtaattaagaagcagaaatgaagcgaagaggggctataaaatctaatgcttcaaactaagttcagatctgaataatttagcaattggggaagccaaaattttcagcttgcacatgcagaacaacaatatactttgcagaacaagacggaatcatgcatatgtaagtggtatctagctaggagaatttcaatagcatagctcttgccttttgctcatgtccatacatatgcccaaaaagaaccaaagggggacaaaaagcaaaccctagttcatagatctgataagaaaaaaggaactcacacaaatcatgcgaccatagtaaaagcaccgcacagatcgaaagatattgcagataaacaaatgattaacacaccaaatactaaatttacggcacacacacacactcagcaagcagctggacacacctcaatttgcaaactgaaaagAaaaaaaaagagatcaaagctggaataatgaatccaatcacaagagctagctagctctctgcaaaattgagctcgatcccaaaccctagctacacatgattaattcttctgaaaccaaattccacaatggtcccggttccaataatagttattaccttgtagaagagatcggcgtctgcggcgggcGgggggaggcggtactcgttcatgatccagctgctgcggacgcccttgggggccttgccggagtagaagacgagcgtcttcttgaggccgatggggcggctgttctcgccgcggatcatccggtcggcccccgtcgccttccagtaccccgacgccgtcacccggttcggccggtcgccgttccggtacttgcggtcccgcggcacgtagaagaaccactccttctccccaatcaccgccattgctgacgcacgcacaaccacagatcgatcgatcaccaaattaactaattatcagcttaatttaattagcttaattatgtgtgatgtgtgtaccggggagctcccatgggtcgaagcggtagaggtcgaggaaggtgatgagctcgacgttgaaccgccggccctccaccttccgccggaggtagaactcgatcagctcctcctccgtcgggtggaaccggaaccccggcatcaccaggtcgttctcgtgcgagtcgccggcgacagcggcggccgcctcctcctgatcggccgccgcttcctcccctgacccggcggcgcccgccgtgacgtcgtccctgctcatggctccctcctcctctccctcgcggtcgtcaccggcatagcgtgcgctgtggcgcggcggcggcagcgacggcgagctagctatagctggaaaagcaggaggagaagagaatttgggggggagcaaatgcaagtgggtggggaagagaggataagaggttggtgttttcacgcttgatat
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| CDS seq | atgagcagggacgacgtcacggcgggcgccgccgggtcaggggaggaagcggcggccgatcaggaggaggcggccgccgctgtcgccggcgactcgcacgagaacgacctggtgatgccggggttccggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggccggcggttcaacgtcgagctcatcaccttcctcgacctctaccgcttcgacccatgggagctccccgcaatggcggtgattggggagaaggagtggttcttctacgtgccgcgggaccgcaagtaccggaacggcgaccggccgaaccgggtgacggcgtcggggtactggaaggcgacgggggccgaccggatgatccgcggcgagaacagccgccccatcggcctcaagaagacgctcgtcttctactccggcaaggcccccaagggctctgagatctcgctctgccgcgtctacaagcgctccggcatcgacgacggccacggccaccaccagcgccccgccggcaacgtgcaagcgtcgtcgtcgtcggcggcggcgaggccgccggagcagcactccggcaacaacactgctgccggcttaccggcttgccggcataggccgtcaccgtcgtcgtcgtcgacgacgacggcgcagcagcacaccagtttccaccagctgctccaaggcgagtgctcggcggcggcggcggcggcgccgccgccgccgtcgctgccagcatcggccacgacgcgcaacagtaatgcgtcacagctgctgatgccgccgcctcccccaaggccgccgtgcgccgccgcctacacgtcggcggcggcggcgccgaccgagagcgccgccgtcctcgccgccgcctccacgtactcgctgcttgccgccgccggcagtagctccacgcacatcgacgagctcagcacgctgctcgcgggccacagccatggcggcgcctacggtaataaccacattgtcgccggaagccatcatcacttccccttgccgccgtcgcagctgatgccgcagctcggcacgctgccgatctcgccgccgctggccgccgtctccgacaggctctgggattggagctcggtccctgacacgtcgacggccagggattacgattcttctggttttagtgatcccaagtaa
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| Protein seq | MSRDDVTAGAAGSGEEAAADQEEAAAAVAGDSHENDLVMPGFRFHPTEEELIEFYLRRKVEGRRFNVELITFLDLYRFDPWELPAMAVIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSGKAPKGSEISLCRVYKRSGIDDGHGHHQRPAGNVQASSSSAAARPPEQHSGNNTAAGLPACRHRPSPSSSSTTTAQQHTSFHQLLQGECSAAAAAAPPPPSLPASATTRNSNASQLLMPPPPPRPPCAAAYTSAAAAPTESAAVLAAASTYSLLAAAGSSSTHIDELSTLLAGHSHGGAYGNNHIVAGSHHHFPLPPSQLMPQLGTLPISPPLAAVSDRLWDWSSVPDTSTARDYDSSGFSDPK |
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| Function | NAC domain-containing protein 35 [UniProtKB/Swiss-Prot:Q9ZVP8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_05g0017360 | OsLiXu_05g0017360.01 | Chr05 | 21371689 | 21374422 | - | NAM | ||
| CDS seq | atgagcagggacgacgtcacggcgggcgccgccgggtcaggggaggaagcggcggccgatcaggaggaggcggccgccgctgtcgccggcgactcgcacgagaacgacctggtgatgccggggttccggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggccggcggttcaacgtcgagctcatcaccttcctcgacctctaccgcttcgacccatgggagctccccgcaatggcggtgattggggagaaggagtggttcttctacgtgccgcgggaccgcaagtaccggaacggcgaccggccgaaccgggtgacggcgtcggggtactggaaggcgacgggggccgaccggatgatccgcggcgagaacagccgccccatcggcctcaagaagacgctcgtcttctactccggcaaggcccccaagggctctgagatctcgctctgccgcgtctacaagcgctccggcatcgacgacggccacggccaccaccagcgccccgccggcaacgtgcaagcgtcgtcgtcgtcggcggcggcgaggccgccggagcagcactccggcaacaacactgctgccggcttaccggcttgccggcataggccgtcaccgtcgtcgtcgtcgacgacgacggcgcagcagcacaccagtttccaccagctgctccaaggcgagtgctcggcggcggcggcggcggcgccgccgccgccgtcgctgccagcatcggccacgacgcgcaacagtaatgcgtcacagctgctgatgccgccgcctcccccaaggccgccgtgcgccgccgcctacacgtcggcggcggcggcgccgaccgagagcgccgccgtcctcgccgccgcctccacgtactcgctgcttgccgccgccggcagtagctccacgcacatcgacgagctcagcacgctgctcgcgggccacagccatggcggcgcctacggtaataaccacattgtcgccggaagccatcatcacttccccttgccgccgtcgcagctgatgccgcagctcggcacgctgccgatctcgccgccgctggccgccgtctccgacaggctctgggattggagctcggtccctgacacgtcgacggccagggattacgattcttctggttttagtgatcccaagtaa
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| Protein seq | MSRDDVTAGAAGSGEEAAADQEEAAAAVAGDSHENDLVMPGFRFHPTEEELIEFYLRRKVEGRRFNVELITFLDLYRFDPWELPAMAVIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRGENSRPIGLKKTLVFYSGKAPKGSEISLCRVYKRSGIDDGHGHHQRPAGNVQASSSSAAARPPEQHSGNNTAAGLPACRHRPSPSSSSTTTAQQHTSFHQLLQGECSAAAAAAPPPPSLPASATTRNSNASQLLMPPPPPRPPCAAAYTSAAAAPTESAAVLAAASTYSLLAAAGSSSTHIDELSTLLAGHSHGGAYGNNHIVAGSHHHFPLPPSQLMPQLGTLPISPPLAAVSDRLWDWSSVPDTSTARDYDSSGFSDPK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.550189 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_05g0418800 | RBH | 1.207844 | 2.416721 | 0.395700 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os05g34600 | RBH | 0.338722 | 0.482108 | 0.090039 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os05g0418800 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_05g0017430 | RBH | 0.140990 | 0.0 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_05g0017430 | RBH | 0.228722 | 0.0 | 0.185759 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_05g0017260 | RBH | 0.729694 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_05g0017270 | RBH | 0.084104 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_05g0017480 | RBH | 1.876051 | 0.0 | 0.675481 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_05G0313900 | RBH | 2.536085 | 1.9821005 | 0.30377 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_05g0016970 | RBH | 0.038241 | 0.0 | 0.146372 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_05G0323700 | RBH | 3.0393905 | 1.7317855 | 0.4857455 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_05g0017320 | RBH | 0.182476 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_05g0017210 | RBH | 0.107636 | 3.565465 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_05g0017340 | RBH | 1.407245 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0042110 | RBH | 0.361711 | 0.0 | 0.092479 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_05g0017410 | RBH | 0.000000 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_05G016900 | RBH | 0.066223 | 0.0 | 0.418742 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_05g0017210 | RBH | 0.561758 | 0.0 | 0.0 |
