Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_01g0042110 | OGI:01114470 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:40205329-40207942 | ||||||||
| Gene Symbol | NAC75, ONAC075, ONAC75 | ||||||||||
| DNA seq | gcttgccccagctaagacgacGaggacgctgtccgtgtaccacaTgtatgcgagctcgatcgacctatcgatcgagcgattccgatcggttatattagagagatcaagcatccaagctgctgctgtgttgtgggtacGtagatgtatgtatagtatagataccgcagccaccaccaccactaccacctctgctttttctaccctcgatatatattgtgctagatactagcctctTAaccctttctctcttcttccgccgccgcgtcctcctccccAacttgaacActactactactcccccacggcgaGctcgcgttctccgggatcaactagccctagcgacggatgcatatgcGgagggggagagcggcgggcggcgAaggagaggcagctgcggtggtggtgatgaGCcggtacgacaacaacgggcatgcggcagcggcggcggcggctgcggtggcgggaggaggaggaggaggaggaggaGgagggaataaggcggcgggggaggtagatgggcatgaggatgacctgGtgatgcccgggttcaggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctcgacctctaccgctaCgacccctgggagctccccggtaattagttagttactctccgcctcgatcatatcaatcgattgatttaggaattgagcatctaattaacaagctcgatGggggtgcagcaatggcggcgataGgggagaagGAgtggttcttctacgtgcctcgggacaggaagtacaggaacggggaccggccgaaccgggtgacggcgtcggggtactggAaggcgacgggggccgaccggatgatccgagccgagaacAaccgccccATcgggctcaagaagacgctcgtcttctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacGAgtatcgccttccccccgccgacaccgaccgctaccacaaggtacccatccatccatgaatctactcgcgcttcgtcttcctcgatcgatctctccttctcatccaattaatttgtaggggattgaattctcagtactagggttagaGgagttcttgtgttgttgattctgcttgcttttagttgcactgctagctgGCgctcatggtttgcccatgaattctagcggtaGtatttaagagtgggtatgattagggtttcatgattcttctttctttGggtgatgaTtttttttggggtgttcgTcatgagtatgcataattgagtgatagaatatgcacctactcgatcacttcgatccctagatgctatatatcttgaatatatGggggcctagaatcctagattcctcaatcattctgagctgaatttctcacaaactttcagtaatcagtaagatgctaagatctgaactgaatttcagtgaaaaattaacccctatcctgatcttctcgcgtccatgaaattgcagactgaaatctcactatgccgcgtgtacaagcgcaccGgcatcgacgacggccatggccacgtctccacggcgcggtcgtcggcgcactcccgcggcggcggcgcggcaccGgtacaggacaacaagcaaggctcctcgtcgacgtccacgccgacgccgccTccaactccgtccaagctccAcctcctcagcagcgagtgcacgtcgccgcccgccatcgtcacggaccacgccgccatggcggcgcacaaggcaccgtcgccgcGgcaccatcagcagcagcagcagctccacgccgccaagccttgcggcggctacctgcagaattcctcgatggcttccgctgccggcggcgatcagcagcagcaatttcagcaagacttcgcggcggcattgtaccagcagtactccAagaacacgagcggtgccttcgcctccacgtactcgctgctcaacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctcgctggtgggccacggcacgccgtcctacattaaccccgcggccGgcagccacaactatagtcaattccttcacctgcctacgacgccgtcgtcgcatcaaccaacgccggcgccgctcGggacGacgacggcggcggcagcggcgacactgccgatgtcgctcgccgccttctccgacaggatctgggactggaataatccgatccccgaggccggaggtagggattacagcaccagtactggattcaagtgaatcagcaatagctacagttcatgcacgcgtgcatggcattctgatcagatggtaccaccatgtactacctctttctctctctctctctctctctgtcccactctctggttcacagttattaattctgatgaaacgatcagatcgagtacgtacgtatcagagtactatacccatgttaattctcaattaatccatagatcatgccttctaaactagtggtaagtatgatcaggagttcaggataggtaatttgtatttctctctgagtaatgatgaactgcatataataaccttcccttgatcgatgaggtcatagtcataacaa
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| CDS seq | atgcatatgcGgagggggagagcggcgggcggcgAaggagaggcagctgcggtggtggtgatgaGCcggtacgacaacaacgggcatgcggcagcggcggcggcggctgcggtggcgggaggaggaggaggaggaggaggaGgagggaataaggcggcgggggaggtagatgggcatgaggatgacctgGtgatgcccgggttcaggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctcgacctctaccgctaCgacccctgggagctccccgcaatggcggcgataGgggagaagGAgtggttcttctacgtgcctcgggacaggaagtacaggaacggggaccggccgaaccgggtgacggcgtcggggtactggAaggcgacgggggccgaccggatgatccgagccgagaacAaccgccccATcgggctcaagaagacgctcgtcttctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacGAgtatcgccttccccccgccgacaccgaccgctaccacaagactgaaatctcactatgccgcgtgtacaagcgcaccGgcatcgacgacggccatggccacgtctccacggcgcggtcgtcggcgcactcccgcggcggcggcgcggcaccGgtacaggacaacaagcaaggctcctcgtcgacgtccacgccgacgccgccTccaactccgtccaagctccAcctcctcagcagcgagtgcacgtcgccgcccgccatcgtcacggaccacgccgccatggcggcgcacaaggcaccgtcgccgcGgcaccatcagcagcagcagcagctccacgccgccaagccttgcggcggctacctgcagaattcctcgatggcttccgctgccggcggcgatcagcagcagcaatttcagcaagacttcgcggcggcattgtaccagcagtactccAagaacacgagcggtgccttcgcctccacgtactcgctgctcaacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctcgctggtgggccacggcacgccgtcctacattaaccccgcggccGgcagccacaactatagtcaattccttcacctgcctacgacgccgtcgtcgcatcaaccaacgccggcgccgctcGggacGacgacggcggcggcagcggcgacactgccgatgtcgctcgccgccttctccgacaggatctgggactggaataatccgatccccgaggccggaggtagggattacagcaccagtactggattcaagtga
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| Protein seq | MHMRRGRAAGGEGEAAAVVVMSRYDNNGHAAAAAAAAVAGGGGGGGGGGNKAAGEVDGHEDDLVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRLPPADTDRYHKTEISLCRVYKRTGIDDGHGHVSTARSSAHSRGGGAAPVQDNKQGSSSTSTPTPPPTPSKLHLLSSECTSPPAIVTDHAAMAAHKAPSPRHHQQQQQLHAAKPCGGYLQNSSMASAAGGDQQQQFQQDFAAALYQQYSKNTSGAFASTYSLLNLVNAASMGSSAAAIDELSSLVGHGTPSYINPAAGSHNYSQFLHLPTTPSSHQPTPAPLGTTTAAAAATLPMSLAAFSDRIWDWNNPIPEAGGRDYSTSTGFK |
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| Function | NAC domain-containing protein 35 [UniProtKB/Swiss-Prot:Q9ZVP8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0042110 | OsLiXu_01g0042110.01 | Chr01 | 40205329 | 40207942 | + | NAM | ||
| CDS seq | atgcatatgcGgagggggagagcggcgggcggcgAaggagaggcagctgcggtggtggtgatgaGCcggtacgacaacaacgggcatgcggcagcggcggcggcggctgcggtggcgggaggaggaggaggaggaggaggaGgagggaataaggcggcgggggaggtagatgggcatgaggatgacctgGtgatgcccgggttcaggttccacccgacggaggaggagctgatcgagttctacctccggcggaaggtggagggcaagcgcttcaacgtcgagctcatcaccttcctcgacctctaccgctaCgacccctgggagctccccgcaatggcggcgataGgggagaagGAgtggttcttctacgtgcctcgggacaggaagtacaggaacggggaccggccgaaccgggtgacggcgtcggggtactggAaggcgacgggggccgaccggatgatccgagccgagaacAaccgccccATcgggctcaagaagacgctcgtcttctactccggcaaggcccccaagggcgtccgcagcagctggatcatgaacGAgtatcgccttccccccgccgacaccgaccgctaccacaagactgaaatctcactatgccgcgtgtacaagcgcaccGgcatcgacgacggccatggccacgtctccacggcgcggtcgtcggcgcactcccgcggcggcggcgcggcaccGgtacaggacaacaagcaaggctcctcgtcgacgtccacgccgacgccgccTccaactccgtccaagctccAcctcctcagcagcgagtgcacgtcgccgcccgccatcgtcacggaccacgccgccatggcggcgcacaaggcaccgtcgccgcGgcaccatcagcagcagcagcagctccacgccgccaagccttgcggcggctacctgcagaattcctcgatggcttccgctgccggcggcgatcagcagcagcaatttcagcaagacttcgcggcggcattgtaccagcagtactccAagaacacgagcggtgccttcgcctccacgtactcgctgctcaacctcgtcaacgcggcatccatgggcagctccgccgctgccattgatgagctgagctcgctggtgggccacggcacgccgtcctacattaaccccgcggccGgcagccacaactatagtcaattccttcacctgcctacgacgccgtcgtcgcatcaaccaacgccggcgccgctcGggacGacgacggcggcggcagcggcgacactgccgatgtcgctcgccgccttctccgacaggatctgggactggaataatccgatccccgaggccggaggtagggattacagcaccagtactggattcaagtga
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| Protein seq | MHMRRGRAAGGEGEAAAVVVMSRYDNNGHAAAAAAAAVAGGGGGGGGGGNKAAGEVDGHEDDLVMPGFRFHPTEEELIEFYLRRKVEGKRFNVELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTASGYWKATGADRMIRAENNRPIGLKKTLVFYSGKAPKGVRSSWIMNEYRLPPADTDRYHKTEISLCRVYKRTGIDDGHGHVSTARSSAHSRGGGAAPVQDNKQGSSSTSTPTPPPTPSKLHLLSSECTSPPAIVTDHAAMAAHKAPSPRHHQQQQQLHAAKPCGGYLQNSSMASAAGGDQQQQFQQDFAAALYQQYSKNTSGAFASTYSLLNLVNAASMGSSAAAIDELSSLVGHGTPSYINPAAGSHNYSQFLHLPTTPSSHQPTPAPLGTTTAAAAATLPMSLAAFSDRIWDWNNPIPEAGGRDYSTSTGFK
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.361711 | 0.0 | 0.092479 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0888300 | RBH | 0.570356 | 2.094893 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g66490 | RBH | 0.322295 | 1.415578 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0888300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0043000 | RBH | 0.185816 | 0.000000 | 1.373569 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0042570 | RBH | 0.062950 | 0.526963 | 0.348889 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0042910 | RBH | 0.0 | 1.096098 | 1.437986 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0042370 | RBH | 0.052040 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0041980 | RBH | 0.441789 | 0.0 | 1.839075 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0635800 | RBH | 2.678769 | 2.6427085 | 0.586967 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0041610 | RBH | 0.0 | 0.000000 | 0.060214 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0636500 | RBH | 2.708034 | 1.2279765 | 0.75608 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0041950 | RBH | 0.040321 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0041900 | RBH | 0.181044 | 1.479628 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0042180 | RBH | 2.894015 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0017360 | RBH | 0.550189 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0041990 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G042380 | RBH | 0.192043 | 0.0 | 0.325263 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0042060 | RBH | 0.935798 | 0.0 | 1.016238 |
