Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0024370 | OGI:04087580 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:31633405-31637128 | ||||||||
| Gene Symbol | RLCK158, OsRLCK158 | ||||||||||
| DNA seq | ggaatcatgctgggcctgggctaagtagcaagaactgaacatgttacacgatacgaacaagttacaagaacaagaaagtcgtgcaactctgctacactttttacatacggcaacaaaccaaatcatcgcgcggcggctcggctcgcggtacgaccgtacgaagcgtacaactctctgctatactcacctcccggtgatggaagtggatgtcatggagcagaaactgagctgccctccggtgaacagcacgccgacgtgcggcagctcgatctcctgccgcttgccgtcgggaggccaaacaaacgcaggcttctcgaacggtggctccggcgcaggggctccgccgaccagcacctgcacggccgtcctcatggacggcctctccctcgggctggggtggcagcacgccagcgccagcctcgccgcgcgctccacctgagcctcgtcgtacgcgccaccgagcaccgcgtcggccgcctccaggaccgtcccgtcgccgtagtgcctccacatccagtccacgatgtacatcggctggcggcggccgtcgtggtcatgctcctgctggcggttgtggtacgtcacggagctgctcgggctcctcccggtgagcacctccatgacgaacaccccgaacgcgtacacgtccgtgtcgaggctggcgcgtccggtgaagaagcactcgtacgccatgtagccgcgggtgcccgccacggcctgcgtcgagtggtgcgtcacctcgtcgaggtggatgacacgggcgaggccgaagtcgccgaggcgcgcgctgtactcctcgtcgagcatgacgttgctcgccttgacgtccctgtggaggatccggctgctgctcccgtggtgcaggtactccagcgcggacgccacgccgcagattatcttgtaccgtcgctcccaggtcagctcagccggtctagcgccgccatacaggagcttgtccaggctacccatggggaagtactcgtagacgaggagcagctcgcctccctcgtggcaccacccgatcagcttcacgaggttgcggtgcgagagcttgctgatcgtgttcacctccgcgacgaactcctgctctcctcggttggaactggatttgttgttcgctgccacccgcttgacggccacctccatgttcatgctgctcaggtagccgtggtacacggtgccgaagccacctctgccgagcttgcgcgaggagctgaagttggcagtcgcacgcctgagctccttgagcttaaatttgacagggccatgggcgtcgatcatcttctcgaggttgcggtaggcgagccttctcttccgcgtcgaccttctccacaccaagaacacaagaaacgaagacatagcaaatagtatgaaggcaacgagaggcagaagcacctttctcccatgccttcttccggtcgtgatatcgtcgtcgattgtggcaaagttccaagactttatttggttcagctcggtgaaatcacctgttgaacctgcaaatcccacatatacgtcgtcgaatagaaattgtgatagatcgacggaccaagctttggaaccatagtgcgccccagtcgtgtcgaactggattaaaattgccaccagtacttgctctgtactattgtaagtgatcctgacctgtacatcagcaccactcgagaggattaatgaaacattgcttagagggtacggatccaaagatccgatgctgttgatgtcgagcccaacgtgattgccgtcagtttcgttgacgctcatcctcgtgtcgaattccacggctacaattcggttcttcggatcgccatctgtccggttgttgcaaatgccgagccactgcccgctgctgtcggtaggcagttccgggttattcgtcaggatgaaagccattccttctcctgtctgattccgtggaaggatgttgggcacgaactccgtcctgaacgatgtcagcgccgatcgccggctgttccacagcttgagcgtctcccttgcgtagagcactcttcccgatcggtggctgatgtcgccggtgctcggtgtgatcaccagggatccatttgctattccggagcctgcgctgaagttgaaatcggccttgttgggagtgccaaagcttgggtaagtgaactgtaagcagctacacgttctgtcaagtatgataagtgcaagggaagctacaaaggaaaagcaaaaggtggtagagtggaggattgccatggctagcaaaatggttcttggtgttttctggtaggcatcggcaagaaggcagaagagatgaattcatagtagtcatagcttctctgtgatgcagtaatgctatgccttcaaaacaaagttttggtgaaaggaatttgtggccaaattggaacttggaacttcgaagagtcagtcaacggcataagattgtctagctgcaagggactaaccatcgcaaaacatgtgtgcactaaacaacgaagttgaacatagaaaatactcaggtagaggaatcgacgttcacatgaagtttagagaaattaagaatgccatttaagaattttgaagtgtagtagtaaactagtaatcccctataaaataggacatccattgatccatatacaaaggacgaggactcaaggagaagaagataatgttcagtgacatatcgctattgccaagtctgaactctgaaggactggagaagaaattattgaagctaaacaatttcttatagaccaagattcgtcatcaatgcggaaatggtctcccgatcactaaggtgttgttcttttctactgaagatgaagacgaagattaagatttttacgcaaaacgatgtggtattaacgtatgattgattgagttttaattattacaaacttgaaaaatagatttatatgatattttagagcaactttcatatagaaagttttcgcacgaaacgcatcgtttagcagtttgaaaaagtgtgccacgaaaatcttaatcttcatcaaattctcgttggagaaaagaacgatacctaatttgaaactgatgaagatgaggattaaattggtgtatgtgaaacaagaaaactatcagcacataattaattaagttttaattattacaaacttgacaaatggatatatttgatattttaaagcaatttctatatataaagtttttacacataacacaacatttattagtttgaaaagcatgctaacgaaaaccaagataaaatatatatattaatgagaaaaaaaagtcgcattagtgattcaagtataataatttgtgggaactactccatttctcgtaatataaatgatttctcgtcatagaaatggagagcaatgtctttgcctggtggatagccacaagaaaaactctaattgaaccgtagagaaggaaaatggacacggtggtgataaactgataattgtgtcatggcaaatttaaaaggagcgaaaagagcgtatcttctaagcgatggcacactcaccttctgaagtccttaactgataattgtgtcatggcggaaccgggggctggatgacagagccaaggaggactgcgtcggcttggcctcacggcagcggaggacgaggggagcggcggtggctcggcctcgcgatggctcgtcgcggtgggcctcggcgagagcgatggccttgtcggctatggcggccctgtctattgcttgtcctcttcaccctcacggtcactagcttggtctccgacgacggctctgaccacc
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| CDS seq | atggctttcatcctgacgaataacccggaactgcctaccgacagcagcgggcagtggctcggcatttgcaacaaccggacagatggcgatccgaagaaccgaattgtagccgtggaattcgacacgaggatgagcgtcaacgaaactgacggcaatcacgttgggctcgacatcaacagcatcggatctttggatccgtaccctctaagcaatgtttcattaatcctctcgagtggtgctgatgtacaggtcaggatcacttacaatagtacagagcaagtactggtggcaattttaatccagttcgacacgactggggcgcactatggttccaaagcttggtccgtcgatctatcacaatttctattcgacgacgtatatgtgggatttgcaggttcaacaggtgatttcaccgagctgaaccaaataaagtcttggaactttgccacaatcgacgacgatatcacgaccggaagaaggcatgggagaaaggtgcttctgcctctcgttgccttcatactatttgctatgtcttcgtttcttgtgttcttggtgtggagaaggtcgacgcggaagagaaggctcgcctaccgcaacctcgagaagatgatcgacgcccatggccctgtcaaatttaagctcaaggagctcaggcgtgcgactgccaacttcagctcctcgcgcaagctcggcagaggtggcttcggcaccgtgtaccacggctacctgagcagcatgaacatggaggtggccgtcaagcgggtggcagcgaacaacaaatccagttccaaccgaggagagcaggagttcgtcgcggaggtgaacacgatcagcaagctctcgcaccgcaacctcgtgaagctgatcgggtggtgccacgagggaggcgagctgctcctcgtctacgagtacttccccatgggtagcctggacaagctcctcctcgacacggacgtgtacgcgttcggggtgttcgtcatggaggtgctcaccgggaggagcccgagcagctccgtgacgtaccacaaccgccagcaggagcatgaccacgacggccgccgccagccgatgtacatcgtggactggatgtggaggcactacggcgacgggacggtcctggaggcggccgacgcggtgctcggtggcgcgtacgacgaggctcaggtggagcgcgcggcgaggctggcgctggcgtgctgccaccccagcccgagggagaggccgtccatgaggacggccgtgcaggtgctggtcggcggagcccctgcgccggagccaccgttcgagaagcctgcgtttgtttggcctcccgacggcaagcggcaggagatcgagctgccgcacgtcggcgtgctgttcaccggagggcagctcagtttctgctccatgacatccacttccatcaccgggaggtga
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| Protein seq | MAFILTNNPELPTDSSGQWLGICNNRTDGDPKNRIVAVEFDTRMSVNETDGNHVGLDINSIGSLDPYPLSNVSLILSSGADVQVRITYNSTEQVLVAILIQFDTTGAHYGSKAWSVDLSQFLFDDVYVGFAGSTGDFTELNQIKSWNFATIDDDITTGRRHGRKVLLPLVAFILFAMSSFLVFLVWRRSTRKRRLAYRNLEKMIDAHGPVKFKLKELRRATANFSSSRKLGRGGFGTVYHGYLSSMNMEVAVKRVAANNKSSSNRGEQEFVAEVNTISKLSHRNLVKLIGWCHEGGELLLVYEYFPMGSLDKLLLDTDVYAFGVFVMEVLTGRSPSSSVTYHNRQQEHDHDGRRQPMYIVDWMWRHYGDGTVLEAADAVLGGAYDEAQVERAARLALACCHPSPRERPSMRTAVQVLVGGAPAPEPPFEKPAFVWPPDGKRQEIELPHVGVLFTGGQLSFCSMTSTSITGR |
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| Function | Probable L-type lectin-domain containing receptor kinase S.5 [UniProtKB/Swiss-Prot:Q9FG33] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0024370 | OsLiXu_04g0024370.01 | Chr04 | 31633405 | 31637128 | - | NAM | ||
| CDS seq | atggctttcatcctgacgaataacccggaactgcctaccgacagcagcgggcagtggctcggcatttgcaacaaccggacagatggcgatccgaagaaccgaattgtagccgtggaattcgacacgaggatgagcgtcaacgaaactgacggcaatcacgttgggctcgacatcaacagcatcggatctttggatccgtaccctctaagcaatgtttcattaatcctctcgagtggtgctgatgtacaggtcaggatcacttacaatagtacagagcaagtactggtggcaattttaatccagttcgacacgactggggcgcactatggttccaaagcttggtccgtcgatctatcacaatttctattcgacgacgtatatgtgggatttgcaggttcaacaggtgatttcaccgagctgaaccaaataaagtcttggaactttgccacaatcgacgacgatatcacgaccggaagaaggcatgggagaaaggtgcttctgcctctcgttgccttcatactatttgctatgtcttcgtttcttgtgttcttggtgtggagaaggtcgacgcggaagagaaggctcgcctaccgcaacctcgagaagatgatcgacgcccatggccctgtcaaatttaagctcaaggagctcaggcgtgcgactgccaacttcagctcctcgcgcaagctcggcagaggtggcttcggcaccgtgtaccacggctacctgagcagcatgaacatggaggtggccgtcaagcgggtggcagcgaacaacaaatccagttccaaccgaggagagcaggagttcgtcgcggaggtgaacacgatcagcaagctctcgcaccgcaacctcgtgaagctgatcgggtggtgccacgagggaggcgagctgctcctcgtctacgagtacttccccatgggtagcctggacaagctcctcctcgacacggacgtgtacgcgttcggggtgttcgtcatggaggtgctcaccgggaggagcccgagcagctccgtgacgtaccacaaccgccagcaggagcatgaccacgacggccgccgccagccgatgtacatcgtggactggatgtggaggcactacggcgacgggacggtcctggaggcggccgacgcggtgctcggtggcgcgtacgacgaggctcaggtggagcgcgcggcgaggctggcgctggcgtgctgccaccccagcccgagggagaggccgtccatgaggacggccgtgcaggtgctggtcggcggagcccctgcgccggagccaccgttcgagaagcctgcgtttgtttggcctcccgacggcaagcggcaggagatcgagctgccgcacgtcggcgtgctgttcaccggagggcagctcagtttctgctccatgacatccacttccatcaccgggaggtga
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| Protein seq | MAFILTNNPELPTDSSGQWLGICNNRTDGDPKNRIVAVEFDTRMSVNETDGNHVGLDINSIGSLDPYPLSNVSLILSSGADVQVRITYNSTEQVLVAILIQFDTTGAHYGSKAWSVDLSQFLFDDVYVGFAGSTGDFTELNQIKSWNFATIDDDITTGRRHGRKVLLPLVAFILFAMSSFLVFLVWRRSTRKRRLAYRNLEKMIDAHGPVKFKLKELRRATANFSSSRKLGRGGFGTVYHGYLSSMNMEVAVKRVAANNKSSSNRGEQEFVAEVNTISKLSHRNLVKLIGWCHEGGELLLVYEYFPMGSLDKLLLDTDVYAFGVFVMEVLTGRSPSSSVTYHNRQQEHDHDGRRQPMYIVDWMWRHYGDGTVLEAADAVLGGAYDEAQVERAARLALACCHPSPRERPSMRTAVQVLVGGAPAPEPPFEKPAFVWPPDGKRQEIELPHVGVLFTGGQLSFCSMTSTSITGR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.406179 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0584100 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g49460 | RBH | 0.0 | 0.0 | 0.079952 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0584100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0024380 | RBH | 0.0 | 0.934626 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0025130 | RBH | 0.000000 | 0.0 | 0.155951 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0024820 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0024600 | RBH | 0.0 | 0.028929 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0024790 | RBH | 0.416505 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0465800 | RBH | 0.360952 | 2.5640425 | 0.6171 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0023560 | RBH | 0.0 | 0.314399 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0468800 | RBH | 0.638508 | 0.4256345 | 0.0134695 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0024040 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0023840 | RBH | 0.0 | 1.481629 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0023970 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0026210 | SBH | 1.749138 | 0.0 | 0.104665 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0024570 | RBH | 0.0 | 1.371406 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G023820 | RBH | 0.0 | 0.0 | 0.160468 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0023730 | RBH | 0.0 | 2.065338 | 0.410092 |
