Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLiXu_04g0018430 | OGI:04075080 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:26671323-26698382 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | gcccatgcaaaagaaacagaatagcaagccaaaccaccatgtgaccccaggcaaacgcagacaacgccttccccggtcgccgcctcgccaagggaccccatttccacggcacctcagaaccgaggagagatgccctgccaacctcctcgatcgtggcggtccgcggatccggcgctcgtttcgctcggtttcctgcagaaaacacgctgtccatctggagttctggacatctggtctgaactctgaacaccgatccgttctctataattaagtgacagcatatcacaatctcctgtacagttctaaacctgtttgctgtccaatcccattgccaccttgcttacaaccaagtaataacaggagcagtacctgctcagagaggtgatgggaagaaaaacagagatgattcagactaccccctgcgtcgcgctgctcttgctcgtcggcgttgcttttgctgctcgatcggcgtcggctatcaccgatggtaagagccttccatagtacatttgccagcttaagatcgtacgtgcgatttagacggttaatcagttgcacgataaatttgtgacgctcatttctgcttagatagtactgaaaatgacgaaagatcgctgatatgttattctgcttgctgcgtgtatttttcaggcctgctgccgaatggcaacttcgaggaggcgccggacaagtcgcagatgaacggcacgagggtgacgggtcgctacgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagcagggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggcttaccctgacgcggggaatgcactactccatcacattcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacgatcacccccgagtccggcgagatccccatccagacggtgtacaccagcagcggctgggactcctactcctgggccttcaaggccaagcacagcgtcgtgttgttcatcgtccacaaccccggtgtctctgatgacgaagcttgcggccccctcatcgactcgttcgccattaagaccctgaaccctcctcaaagaacgaaaggtaattaattaattgagccgggtgctaacctctccacaaagctgctatcagtgtgcatctctacaaaattgaatacaaggatgtgctcgcagtcatgaaacaatcgaacaaaatgaaccaggtaacatgctgaagaatgggggcttcgaggagggcccgtacatcttccccaacacgtcctggggcgtgcttgtgccgcccatggacgaggacgactactcgccgctgtccccgtggacgatcctgtcgaccaccaagtccgtcaagtacatcgacgcggcgcactacgctgtgccgggcggcgcccgcgcggttgagctggtgtccggcatggagacggcgatgctgcaggaggtgagcaccgtgcccgggcggtcgtacaggctggagttctccgtcggggacgccggcgacgggtgctccgggtccctgaccgtgcaggcgtacgcgtcgtgcgggagcgtgaaggtgacgtaccagtcgcagggcacgggcggctacaagcgcgggctgctcgagttcacggccacggagaaacggacgcgggtagtgttcgtcagcatggcctacaccacgaagtccgacggcacgctgtgtggtcccgtcatcgacgacgcgtcgctcgtcagtgtccgcagccaccgccggttccttctgtaatattattactatcgtcaacgtcactagaatttaaaatgacttaaagttgtcccatatgaaggaatatctcaattccttttatatgattcttatgccaaaagggtgagatgattttttttccgaggaaaaaaatgtgagatattatggatgcaattgatagaaaaccgggggtaattacataaccgtacatgcttattcgaatattgaatatgaccaggcccatgtttggatgcaaagaaacgaagtcagtagaaaagatgattgaatttgacttgtctcaactatcaagtcacaagtgtaatgtactcatttatgttagattattggaatcatattttaaggttgagatcaagctcttcattagtagtcccagaggtaagcttcacgtctactacatctattctaaaataaacaaacatactatatacaatactctcttcgtctcataatataaaaaagtaaaataaacaaacatactatatacaatactctctccatctcataatataaaaaagttttagagttatatacggttattAaaaaaataggtacaaataaatggtggagggttataattggatgagtagtagaggtaggtgtaaaaagtgaatggtggagggttttgattggttgggaagagaatgttgattgagaagttatattttgggataaatcatgaggactaaaaattgttatatttttgggacggagagggtattatgaatttagacaaactcttgtctatttgtaaactagaatacatcacatcttgtgctatatttgtatatttgtctattttagaacgaagggagtagtcaagatcattttaaattagactatggaataaacaattattccttctattaaaaaaacatttctagccctcaaactttattaaacaaaatttcatttctaccttcctacctacttattggttcacaaaatcaagaagtttattctttgcctacaacttatctattatagtactaataactacatttttaattaacaatggacactttggttgtttacactaaccattagtttataaaccgatgattagaaatagagtttttctgggtcggaaataatagacatgttgcaaggtcctttaaaaagtcaaatatatttgtggctagtaaactttttgtctgtgatatcttggtgcataaaaatctttaaaaatgtaaatccacaccgtttatgtttgcttaacgtaccatcactattccagaaatacaacgtatcatgttagagtataaaataggaaagtgttgttgaacatcctatatttttgcaaatactggacggtgttgcactatattatcacagaatgtttcacatattgcacaccacgatgAaaaatgtttcaacgaaaatgtttcatatgtttcattaattgaggaaaatattacatctttttaactgaaattcttgctttccgtcttgttgcttacaggtcctgcagtatcgtcatgtgtgattagtaatagcaacacaagccattagcatcaaatgaacgcattatcgtgtcaaaaaaagatcaacgcgttatagtgtggatctaaccagatttgggccacgacatttgtgtactacccagtgtgatagtgcgtcttaatcggtacggaagaaagtaaaatttttgggctagtgatttcggcctcatgggccagatcggcagaccaaaccacgtgtacacccaacacgaggcccgttttctcagccctagtcatccccacttgcccggatcaacgacgggagtcgccgcatcgggcggcgtgcaccagtaactacagtttgtcacctcctcgcaggtcgccgccacagatgcagggaagggcggagttttgtaatggcaggtggccatgcgaacgagaaagaagggaaaggaatggccatgtgacattgtgaccccaagccaaacaccgcaacacgcagtcgcgccttccccagtcaccaacacgccgaggaactccatttccaccgcatctcaggacggagagatgccctgccaaccgcctcgatcgtggcggcccgtgcatccggagcgagttttgctcggcttgccgtaggaagcaaggtgcccaacttgccagcactagctccatccaggttcttccgtcaaaaaaagctccatccaggttacatcctctctgagcacgcatctcctctataactacaagtgccaacacagcactgtgatgcagcactacttgtttccattaccaaaattctgcggcaacttgtttacagctgagtatcagatattcagagtatagggagtacttcttgtcccgaaggcagctgatgagaaggaaaacagagatggtgcggagcacctgctgcgtggtgctgctcttgctcctcagcgttgctgctcgatcggcttcggccatcatggacggtgagaacctgcaacaccatgctagcttaaacaattgtttaacacagttgtggTttttcatgataaatttctcatgctcatttctggtcaataatttggcgagtgacacttgatagaaactagctggtgcacgagcgagttcgctgacatgtgtgctctacgctgcgtgttcaggcctgctgccgaatggcaatttcgaggaggcgccggacaagtcgcagctgaacggcacgagggtgatcgggcgctacgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgcagggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggctcaccctgacgcggggaatgcactactccgtcaccttcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacggtcaccccggagatcggcgaggtccccatccagaccgtgtacaccagcagcggctgggactcctactcctgggcgttcaaggcgagacgcagcgacgtgtcgctcatcgttcacaaccctggcgtcaccgatgacgcggcctgcggccccctcatcgactcgttcgccatcaagactctgcaatctcctccaagcaccaaaggtaactaaagatcgatgtcactattgaagtttgctctaatgctgtaattgcatccttacatagtttaatacgttctccgtgaaacaaatcccgtcagataacttgctgaaga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gccgagttaccattgccgatgtgcgaccgttggggttctgcccaatagtcgagatcggtcccacttgtcaccaggctttaggagtggcgtcacgcccgaccgcttcccttgaagagggcgatcgtcctggcataacgccGggggctactgtcggtgacatgggaccgggagtaccatgactagaggcttgaggcagacacaatcgcccacgcggcttggcaccctcgggggacgtcgggcccgagggtgatgtgttcgccctcctcttagtctccccgaGggggtcgggccacttccgcctcggccctgaggggcgaagcgccccgacccctcgtgttttctcctccgcgtgtatgagttaggtaagcacagcgggtctcacctaaccgcatttattgcgttttggttgagcctgtcatgccgcatgtaacgcagtgcagtgcactcatttatccggtctgtgacaggtcacagaccggtcagatcgcggtcaggtggcgacaggcggtctgacgcacgcctcgccccatcctatcaagatgagggcttctaggcgctcgttcccagaaggagctagcgtgttacctcccagagatggcacgttagtcctgggtagatatatgccagacttcatcctaaccattacaggcaagatgttgtgtgaagaagggcaaacatgcatgttactaagctgacacgtggtggacaagaatgactgatttgtgaccagtctgacactgatcatgtcgtcagcagacagccgcgatcccacgtcgcgcctgcctccggcggaagtggaggtaggtatgtgccgtcccatcagaagattattgggacggcaactatacaaatctccgtccatttatgaagaaaaggcaagtccagtttggaaggggagagagggtgcatgtggtatccccttgagatataaaaggaggaccttgcccacctagaaaggggacggaactctgggagattggccacccagaacaagggagaggctgcttcattctttgtagcttcttcatacacagatccaccaaaaacacaggagtagggtattgcgcttcacagcggcccgaacctgtatacatcgcccgtgtcttgtgtgctctttcgactctggcgaacatttcacatacagagagcttagaatttcaccctgagcccccggccgaaccggcaaaggggggcctgcgcggtcttccggtgaggagccccacgctccgtcaggagggaataccgatcaatgtgaaagaagaaacgcaagatgtaggcctggtttagttctcaaTtttttttttcaaatttcaacttttccatcacatcaaaactttcctacagataaacttccaactttttcatcacatcgtttcaatttcaatcaaacttttaaTtttggtgtgaacaaaatactcctgtgaaggttttgacttttctagatgcatgaatgatatatttgactccggggcagaaggatagtagtactcctacattagtacatttgaatggataaaaaatctgaaaaatgccttcaacggtctgccgtgccggccagtgcgatcgacgaaaagttgaaaataaccaatagcaaagcactgcaggactgcagccgtgccgtactacaccgcgcacgaggtgataaaaaagttaaaaatttacatatatagaaaaattttaatgtgatagaaaagttaaaagtttaaagaaaaacttcgatctaactcggcctgagtcggaatctctcctgctactggtagtgccaatgcgttgaacagagcgtgtgccaCccaagctccacgtggctgcaggcggtcgctctgcgtctgcagcgtgccacgggcatcgacgaagatgcgtgctgtccctctagtacgtggcgtccggcccgcgagtgtcggcgtggtctcgcggccaaagctggggagctctcgtcggcgtgggagtccatctgcgatcatgacgaagggcgccacgcttttcatggagctgttcgtgctttgtcgtcggcgcgtctgctcgaccggttgttgatgttgttgacgacgagaactaggtag
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CDS seq | atgggaagaaaaacagagatgattcagactaccccctgcgtcgcgctgctcttgctcgtcggcgttgcttttgctgctcgatcggcgtcggctatcaccgatggcctgctgccgaatggcaacttcgaggaggcgccggacaagtcgcagatgaacggcacgagggtgacgggtcgctacgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagcagggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggcttaccctgacgcggggaatgcactactccatcacattcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacgatcacccccgagtccggcgagatccccatccagacggtgtacaccagcagcggctgggactcctactcctgggccttcaaggccaagcacagcgtcgtgttgttcatcgtccacaaccccggtgtctctgatgacgaagcttgcggccccctcatcgactcgttcgccattaagaccctgaaccctcctcaaagaacgaaaggtaacatgctgaagaatgggggcttcgaggagggcccgtacatcttccccaacacgtcctggggcgtgcttgtgccgcccatggacgaggacgactactcgccgctgtccccgtggacgatcctgtcgaccaccaagtccgtcaagtacatcgacgcggcgcactacgctgtgccgggcggcgcccgcgcggttgagctggtgtccggcatggagacggcgatgctgcaggaggtgagcaccgtgcccgggcggtcgtacaggctggagttctccgtcggggacgccggcgacgggtgctccgggtccctgaccgtgcaggcgtacgcgtcgtgcgggagcgtgaaggtgacgtaccagtcgcagggcacgggcggctacaagcgcgggctgctcgagttcacggccacggagaaacggacgcgggtagtgttcgtcagcatggcctacaccacgaagtccgacggcacgctgtgtggtcccgtcatcgacgacgcgtcgctcgtcagtgtccgcagccaccgccggttccttctatattcagagtatagggagtacttcttgtcccgaaggcagctgatgagaaggaaaacagagatggtgcggagcacctgctgcgtggtgctgctcttgctcctcagcgttgctgctcgatcggcttcggccatcatggacggcctgctgccgaatggcaatttcgaggaggcgccggacaagtcgcagctgaacggcacgagggtgatcgggcgctacgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgcagggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggctcaccctgacgcggggaatgcactactccgtcaccttcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacggtcaccccggagatcggcgaggtccccatccagaccgtgtacaccagcagcggctgggactcctactcctgggcgttcaaggcgagacgcagcgacgtgtcgctcatcgttcacaaccctggcgtcaccgatgacgcggcctgcggccccctcatcgactcgttcgccatcaagactctgcaatctcctccaagcaccaaagataacttgctgaagaatgggggcttcgaggaaggcccgtacatcttcccaaacacgtcgtggggcgtgcttgtgccgccgatggacgaggacgactactcgccactgtcgccatggacgatcatgggatacaccaagtccgtcaagtacgtggacgcggcgcactacgccgttccagggggcgcacgcgcggtggagctggtggccggcatggaggcggcgctggtgcaggaggtgtgcaccgtgcccgggcggtcgtaccggctggagttctccgtcggggacgccggcgacgggtgcgtggggtccatgtccgtgcaggcgtacgtgtcgcacggcagcgtgaaggtgccgtacgagtcgcagggcaggggtgggtacaagcgcggggtgctcgagttcacggcgacggacaagcggacgcgggtggtgttcgtcagcatggcctacatcatgaagcccgacggcacgctctgtgggcccgtcgtcgacgacgcgtcggtcgtcggcgtccacaaccatcgccggcttcttctagtcggacgtcgggagcagccgagagctcgcgactcgcgagaagggagccacggtatgactgggagcgcgcgtagcgtcgtggcgctgctcttcttgctcgtcggctcggctgctcgggccgattcaaccgtcaccgatggcctgttgccaaatggcaacttcgaggacgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccataccgaactgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgatcctggcggtgccggagggcgcgcgcgccgtgcgattgggcaacgacgccaccattcggcagaggcttagcgtgacgcggcgcgcttactactccatcactttcagcgcggcgcgcacctgcgcccagaaggagaagctgaacgtgtccgtcacaccggagttcggcgtgctcccgatccagacggtttacaccagcagcggctgggactcctactcctgggccttcagggccaaacacagcgtcgtgtggctctccatccacaaccccggcgaggaggaggacccggcgtgcggcccgctcattgactccattgccatcaagaacctctaccctccgcgccgcaccaaaggaaacatgttgagaaacggagacctggaggaggggccgtacatcttcccggacgcgacgtggggcgtgctggtgccaccgatcttcgaggacgagcactcgccgctgccggggtggatgatcatgtcggacacgaaggtcatcaagtacgtggactcgccgcaccacagggtgccgcagggcgcgcgcgccgtggagcttgtggccggcagggagaccgcgctggtgcaggaggtggcgaccgtgcccgggcggtcgtacaggctgtcgttctccgtcggggacgcgggcaacgggtgcaaggattcgctggccgtggaggcgtacgcggcgcgggccacggccaaggtaccgtacgagtcgcagggcacgggcgggcacaagcgcgcccagctcgagttcgcggcggtcgcgaacctgacgcgcgtggtgttccagagcttcaactaccacacgaagccggacgggacgctgtgcgggcctctcgtcgatgacatctccctcgtcagcgtacgcaagcgcgctgctcgcctccggcgcgtctcgcggcgtcccggactcatcctccctgcacagatcacacaagttgtaataagcaacagctcttatatatgtgagctcgcgcactggcccctcgcgaatcgcgaagttcgagtgctggaccgagtgacgagagctcatgatcatggtcttggcgaagtgcacgctctgcctggctcttgtggtggtggtgctcgttggcgtggctgcaccggtggtcttctctgtcaccgatggccttctaccaaacggcaacttcgagcacgggccggacaagtcccagctgaaccgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcaggacatgatcctggcggtgccggagggcgcacgccgtgcgccttggcaacgacgcaaccatccggcagcggatcagcgtcacctcgccgcgcgcacctgcgcccaggccgagaagctgaacgtgtccgtcacgccggtgttcggcgtgctcccgatccagaccgtgtacaccagcaccggctgggagtcctactcctgggccttcaaggccgaacacagcgccgtgtggctctccatccacaaccccagcgtcgaggaggacccggcctgcggcccactcatcgacctcgtcgccatcaagactcttcctcctccccatcacaccaggggtggtacaatgctgaggaacggggacttcgaggagggcccgtacatcttcgccgacacgccgtggggtgtcctggtgccgccgatggacgaggacgtgcactcgccgctgcccgggtggatggtcatgtcgaccacgaaggtcgtcaagtacgtggactcggcgcgccacgcggtgccgagcggcgcgcacgccgtggagatggtggccgggagggagtgcgcgctggtgcaggaggtggcgaccgtgcccgggcggtggtacacgctgtcgttctccgtcggggacgccggcaacaagtgcatcgggtcccttgccgtggacgcgtacgcggcgcgggcgacgctgaaggtgtcgtacgagtcgcggggcactggcgggcacgagcgcgccgagctcgtgttcgcggcggtcgccaaccggacgcgcgtggtgttccacagctccaaccaccatatgaagtcggacggcacgctgtgcggtcctgtggtcgatgacgtctccctccgtgccacgggcatcgacgaagatgcgtgctgtccctctagtacgtggcgtccggcccgcgagtgtcggcgtggtctcgcggccaaagctggggagctctcgtcggcgtgggagtccatctgcgatcatgacgaagggcgccacgcttttcatggagctgttcgtgctttgtcgtcggcgcgtctgctcgaccggttgttgatgttgttgacgacgagaactaggtag
More
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Protein seq | MGRKTEMIQTTPCVALLLLVGVAFAARSASAITDGLLPNGNFEEAPDKSQMNGTRVTGRYAIPQWEISGFVEYIGSGQKQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSITFSAARTCAQSELLNITITPESGEIPIQTVYTSSGWDSYSWAFKAKHSVVLFIVHNPGVSDDEACGPLIDSFAIKTLNPPQRTKGNMLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTILSTTKSVKYIDAAHYAVPGGARAVELVSGMETAMLQEVSTVPGRSYRLEFSVGDAGDGCSGSLTVQAYASCGSVKVTYQSQGTGGYKRGLLEFTATEKRTRVVFVSMAYTTKSDGTLCGPVIDDASLVSVRSHRRFLLYSEYREYFLSRRQLMRRKTEMVRSTCCVVLLLLLSVAARSASAIMDGLLPNGNFEEAPDKSQLNGTRVIGRYAIPQWEISGFVEYIGSGQMQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSVTFSAARTCAQSELLNITVTPEIGEVPIQTVYTSSGWDSYSWAFKARRSDVSLIVHNPGVTDDAACGPLIDSFAIKTLQSPPSTKDNLLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTIMGYTKSVKYVDAAHYAVPGGARAVELVAGMEAALVQEVCTVPGRSYRLEFSVGDAGDGCVGSMSVQAYVSHGSVKVPYESQGRGGYKRGVLEFTATDKRTRVVFVSMAYIMKPDGTLCGPVVDDASVVGVHNHRRLLLVGRREQPRARDSREGSHGMTGSARSVVALLFLLVGSAARADSTVTDGLLPNGNFEDGPDKSQLNGTVVTGRYAIPNWEISGFVEYIESGHREQDMILAVPEGARAVRLGNDATIRQRLSVTRRAYYSITFSAARTCAQKEKLNVSVTPEFGVLPIQTVYTSSGWDSYSWAFRAKHSVVWLSIHNPGEEEDPACGPLIDSIAIKNLYPPRRTKGNMLRNGDLEEGPYIFPDATWGVLVPPIFEDEHSPLPGWMIMSDTKVIKYVDSPHHRVPQGARAVELVAGRETALVQEVATVPGRSYRLSFSVGDAGNGCKDSLAVEAYAARATAKVPYESQGTGGHKRAQLEFAAVANLTRVVFQSFNYHTKPDGTLCGPLVDDISLVSVRKRAARLRRVSRRPGLILPAQITQVVISNSSYICELAHWPLANREVRVLDRVTRAHDHGLGEVHALPGSCGGGARWRGCTGGLLCHRWPSTKRQLRARAGQVPAEPNWEISGFVEYIGSGHKEQDMILAVPEGARRAPWQRRNHPAADQRHLAARTCAQAEKLNVSVTPVFGVLPIQTVYTSTGWESYSWAFKAEHSAVWLSIHNPSVEEDPACGPLIDLVAIKTLPPPHHTRGGTMLRNGDFEEGPYIFADTPWGVLVPPMDEDVHSPLPGWMVMSTTKVVKYVDSARHAVPSGAHAVEMVAGRECALVQEVATVPGRWYTLSFSVGDAGNKCIGSLAVDAYAARATLKVSYESRGTGGHERAELVFAAVANRTRVVFHSSNHHMKSDGTLCGPVVDDVSLRATGIDEDACCPSSTWRPARECRRGLAAKAGELSSAWESICDHDEGRHAFHGAVRALSSARLLDRLLMLLTTRTR |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_04g0018430 | OsLiXu_04g0018430.01 | Chr04 | 26671323 | 26698382 | + | NAM | ||
CDS seq | atgggaagaaaaacagagatgattcagactaccccctgcgtcgcgctgctcttgctcgtcggcgttgcttttgctgctcgatcggcgtcggctatcaccgatggcctgctgccgaatggcaacttcgaggaggcgccggacaagtcgcagatgaacggcacgagggtgacgggtcgctacgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagcagggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggcttaccctgacgcggggaatgcactactccatcacattcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacgatcacccccgagtccggcgagatccccatccagacggtgtacaccagcagcggctgggactcctactcctgggccttcaaggccaagcacagcgtcgtgttgttcatcgtccacaaccccggtgtctctgatgacgaagcttgcggccccctcatcgactcgttcgccattaagaccctgaaccctcctcaaagaacgaaaggtaacatgctgaagaatgggggcttcgaggagggcccgtacatcttccccaacacgtcctggggcgtgcttgtgccgcccatggacgaggacgactactcgccgctgtccccgtggacgatcctgtcgaccaccaagtccgtcaagtacatcgacgcggcgcactacgctgtgccgggcggcgcccgcgcggttgagctggtgtccggcatggagacggcgatgctgcaggaggtgagcaccgtgcccgggcggtcgtacaggctggagttctccgtcggggacgccggcgacgggtgctccgggtccctgaccgtgcaggcgtacgcgtcgtgcgggagcgtgaaggtgacgtaccagtcgcagggcacgggcggctacaagcgcgggctgctcgagttcacggccacggagaaacggacgcgggtagtgttcgtcagcatggcctacaccacgaagtccgacggcacgctgtgtggtcccgtcatcgacgacgcgtcgctcgtcagtgtccgcagccaccgccggttccttctatattcagagtatagggagtacttcttgtcccgaaggcagctgatgagaaggaaaacagagatggtgcggagcacctgctgcgtggtgctgctcttgctcctcagcgttgctgctcgatcggcttcggccatcatggacggcctgctgccgaatggcaatttcgaggaggcgccggacaagtcgcagctgaacggcacgagggtgatcgggcgctacgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgcagggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggctcaccctgacgcggggaatgcactactccgtcaccttcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacggtcaccccggagatcggcgaggtccccatccagaccgtgtacaccagcagcggctgggactcctactcctgggcgttcaaggcgagacgcagcgacgtgtcgctcatcgttcacaaccctggcgtcaccgatgacgcggcctgcggccccctcatcgactcgttcgccatcaagactctgcaatctcctccaagcaccaaagataacttgctgaagaatgggggcttcgaggaaggcccgtacatcttcccaaacacgtcgtggggcgtgcttgtgccgccgatggacgaggacgactactcgccactgtcgccatggacgatcatgggatacaccaagtccgtcaagtacgtggacgcggcgcactacgccgttccagggggcgcacgcgcggtggagctggtggccggcatggaggcggcgctggtgcaggaggtgtgcaccgtgcccgggcggtcgtaccggctggagttctccgtcggggacgccggcgacgggtgcgtggggtccatgtccgtgcaggcgtacgtgtcgcacggcagcgtgaaggtgccgtacgagtcgcagggcaggggtgggtacaagcgcggggtgctcgagttcacggcgacggacaagcggacgcgggtggtgttcgtcagcatggcctacatcatgaagcccgacggcacgctctgtgggcccgtcgtcgacgacgcgtcggtcgtcggcgtccacaaccatcgccggcttcttctagtcggacgtcgggagcagccgagagctcgcgactcgcgagaagggagccacggtatgactgggagcgcgcgtagcgtcgtggcgctgctcttcttgctcgtcggctcggctgctcgggccgattcaaccgtcaccgatggcctgttgccaaatggcaacttcgaggacgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccataccgaactgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgatcctggcggtgccggagggcgcgcgcgccgtgcgattgggcaacgacgccaccattcggcagaggcttagcgtgacgcggcgcgcttactactccatcactttcagcgcggcgcgcacctgcgcccagaaggagaagctgaacgtgtccgtcacaccggagttcggcgtgctcccgatccagacggtttacaccagcagcggctgggactcctactcctgggccttcagggccaaacacagcgtcgtgtggctctccatccacaaccccggcgaggaggaggacccggcgtgcggcccgctcattgactccattgccatcaagaacctctaccctccgcgccgcaccaaaggaaacatgttgagaaacggagacctggaggaggggccgtacatcttcccggacgcgacgtggggcgtgctggtgccaccgatcttcgaggacgagcactcgccgctgccggggtggatgatcatgtcggacacgaaggtcatcaagtacgtggactcgccgcaccacagggtgccgcagggcgcgcgcgccgtggagcttgtggccggcagggagaccgcgctggtgcaggaggtggcgaccgtgcccgggcggtcgtacaggctgtcgttctccgtcggggacgcgggcaacgggtgcaaggattcgctggccgtggaggcgtacgcggcgcgggccacggccaaggtaccgtacgagtcgcagggcacgggcgggcacaagcgcgcccagctcgagttcgcggcggtcgcgaacctgacgcgcgtggtgttccagagcttcaactaccacacgaagccggacgggacgctgtgcgggcctctcgtcgatgacatctccctcgtcagcgtacgcaagcgcgctgctcgcctccggcgcgtctcgcggcgtcccggactcatcctccctgcacagatcacacaagttgtaataagcaacagctcttatatatgtgagctcgcgcactggcccctcgcgaatcgcgaagttcgagtgctggaccgagtgacgagagctcatgatcatggtcttggcgaagtgcacgctctgcctggctcttgtggtggtggtgctcgttggcgtggctgcaccggtggtcttctctgtcaccgatggccttctaccaaacggcaacttcgagcacgggccggacaagtcccagctgaaccgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcaggacatgatcctggcggtgccggagggcgcacgccgtgcgccttggcaacgacgcaaccatccggcagcggatcagcgtcacctcgccgcgcgcacctgcgcccaggccgagaagctgaacgtgtccgtcacgccggtgttcggcgtgctcccgatccagaccgtgtacaccagcaccggctgggagtcctactcctgggccttcaaggccgaacacagcgccgtgtggctctccatccacaaccccagcgtcgaggaggacccggcctgcggcccactcatcgacctcgtcgccatcaagactcttcctcctccccatcacaccaggggtggtacaatgctgaggaacggggacttcgaggagggcccgtacatcttcgccgacacgccgtggggtgtcctggtgccgccgatggacgaggacgtgcactcgccgctgcccgggtggatggtcatgtcgaccacgaaggtcgtcaagtacgtggactcggcgcgccacgcggtgccgagcggcgcgcacgccgtggagatggtggccgggagggagtgcgcgctggtgcaggaggtggcgaccgtgcccgggcggtggtacacgctgtcgttctccgtcggggacgccggcaacaagtgcatcgggtcccttgccgtggacgcgtacgcggcgcgggcgacgctgaaggtgtcgtacgagtcgcggggcactggcgggcacgagcgcgccgagctcgtgttcgcggcggtcgccaaccggacgcgcgtggtgttccacagctccaaccaccatatgaagtcggacggcacgctgtgcggtcctgtggtcgatgacgtctccctccgtgccacgggcatcgacgaagatgcgtgctgtccctctagtacgtggcgtccggcccgcgagtgtcggcgtggtctcgcggccaaagctggggagctctcgtcggcgtgggagtccatctgcgatcatgacgaagggcgccacgcttttcatggagctgttcgtgctttgtcgtcggcgcgtctgctcgaccggttgttgatgttgttgacgacgagaactaggtag
More
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Protein seq | MGRKTEMIQTTPCVALLLLVGVAFAARSASAITDGLLPNGNFEEAPDKSQMNGTRVTGRYAIPQWEISGFVEYIGSGQKQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSITFSAARTCAQSELLNITITPESGEIPIQTVYTSSGWDSYSWAFKAKHSVVLFIVHNPGVSDDEACGPLIDSFAIKTLNPPQRTKGNMLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTILSTTKSVKYIDAAHYAVPGGARAVELVSGMETAMLQEVSTVPGRSYRLEFSVGDAGDGCSGSLTVQAYASCGSVKVTYQSQGTGGYKRGLLEFTATEKRTRVVFVSMAYTTKSDGTLCGPVIDDASLVSVRSHRRFLLYSEYREYFLSRRQLMRRKTEMVRSTCCVVLLLLLSVAARSASAIMDGLLPNGNFEEAPDKSQLNGTRVIGRYAIPQWEISGFVEYIGSGQMQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSVTFSAARTCAQSELLNITVTPEIGEVPIQTVYTSSGWDSYSWAFKARRSDVSLIVHNPGVTDDAACGPLIDSFAIKTLQSPPSTKDNLLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTIMGYTKSVKYVDAAHYAVPGGARAVELVAGMEAALVQEVCTVPGRSYRLEFSVGDAGDGCVGSMSVQAYVSHGSVKVPYESQGRGGYKRGVLEFTATDKRTRVVFVSMAYIMKPDGTLCGPVVDDASVVGVHNHRRLLLVGRREQPRARDSREGSHGMTGSARSVVALLFLLVGSAARADSTVTDGLLPNGNFEDGPDKSQLNGTVVTGRYAIPNWEISGFVEYIESGHREQDMILAVPEGARAVRLGNDATIRQRLSVTRRAYYSITFSAARTCAQKEKLNVSVTPEFGVLPIQTVYTSSGWDSYSWAFRAKHSVVWLSIHNPGEEEDPACGPLIDSIAIKNLYPPRRTKGNMLRNGDLEEGPYIFPDATWGVLVPPIFEDEHSPLPGWMIMSDTKVIKYVDSPHHRVPQGARAVELVAGRETALVQEVATVPGRSYRLSFSVGDAGNGCKDSLAVEAYAARATAKVPYESQGTGGHKRAQLEFAAVANLTRVVFQSFNYHTKPDGTLCGPLVDDISLVSVRKRAARLRRVSRRPGLILPAQITQVVISNSSYICELAHWPLANREVRVLDRVTRAHDHGLGEVHALPGSCGGGARWRGCTGGLLCHRWPSTKRQLRARAGQVPAEPNWEISGFVEYIGSGHKEQDMILAVPEGARRAPWQRRNHPAADQRHLAARTCAQAEKLNVSVTPVFGVLPIQTVYTSTGWESYSWAFKAEHSAVWLSIHNPSVEEDPACGPLIDLVAIKTLPPPHHTRGGTMLRNGDFEEGPYIFADTPWGVLVPPMDEDVHSPLPGWMVMSTTKVVKYVDSARHAVPSGAHAVEMVAGRECALVQEVATVPGRWYTLSFSVGDAGNKCIGSLAVDAYAARATLKVSYESRGTGGHERAELVFAAVANRTRVVFHSSNHHMKSDGTLCGPVVDDVSLRATGIDEDACCPSSTWRPARECRRGLAAKAGELSSAWESICDHDEGRHAFHGAVRALSSARLLDRLLMLLTTRTR
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLiXu_04g0018430 | OsLiXu_04g0018430.02 | Chr04 | 26675340 | 26698382 | + | NAM | ||
CDS seq | atgagaaggaaaacagagatggtgcggagcacctgctgcgtggtgctgctcttgctcctcagcgttgctgctcgatcggcttcggccatcatggacggcctgctgccgaatggcaatttcgaggaggcgccggacaagtcgcagctgaacggcacgagggtgatcgggcgctacgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgcagggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggctcaccctgacgcggggaatgcactactccgtcaccttcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacggtcaccccggagatcggcgaggtccccatccagaccgtgtacaccagcagcggctgggactcctactcctgggcgttcaaggcgagacgcagcgacgtgtcgctcatcgttcacaaccctggcgtcaccgatgacgcggcctgcggccccctcatcgactcgttcgccatcaagactctgcaatctcctccaagcaccaaagataacttgctgaagaatgggggcttcgaggaaggcccgtacatcttcccaaacacgtcgtggggcgtgcttgtgccgccgatggacgaggacgactactcgccactgtcgccatggacgatcatgggatacaccaagtccgtcaagtacgtggacgcggcgcactacgccgttccagggggcgcacgcgcggtggagctggtggccggcatggaggcggcgctggtgcaggaggtgtgcaccgtgcccgggcggtcgtaccggctggagttctccgtcggggacgccggcgacgggtgcgtggggtccatgtccgtgcaggcgtacgtgtcgcacggcagcgtgaaggtgccgtacgagtcgcagggcaggggtgggtacaagcgcggggtgctcgagttcacggcgacggacaagcggacgcgggtggtgttcgtcagcatggcctacatcatgaagcccgacggcacgctctgtgggcccgtcgtcgacgacgcgtcggtcgtcggcgtccacaaccatcgccggcttcttctagtcggacgtcgggagcagccgagagctcgcgactcgcgagaagggagccacggtatgactgggagcgcgcgtagcgtcgtggcgctgctcttcttgctcgtcggctcggctgctcgggccgattcaaccgtcaccgatggcctgttgccaaatggcaacttcgaggacgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccataccgaactgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgatcctggcggtgccggagggcgcgcgcgccgtgcgattgggcaacgacgccaccattcggcagaggcttagcgtgacgcggcgcgcttactactccatcactttcagcgcggcgcgcacctgcgcccagaaggagaagctgaacgtgtccgtcacaccggagttcggcgtgctcccgatccagacggtttacaccagcagcggctgggactcctactcctgggccttcagggccaaacacagcgtcgtgtggctctccatccacaaccccggcgaggaggaggacccggcgtgcggcccgctcattgactccattgccatcaagaacctctaccctccgcgccgcaccaaaggaaacatgttgagaaacggagacctggaggaggggccgtacatcttcccggacgcgacgtggggcgtgctggtgccaccgatcttcgaggacgagcactcgccgctgccggggtggatgatcatgtcggacacgaaggtcatcaagtacgtggactcgccgcaccacagggtgccgcagggcgcgcgcgccgtggagcttgtggccggcagggagaccgcgctggtgcaggaggtggcgaccgtgcccgggcggtcgtacaggctgtcgttctccgtcggggacgcgggcaacgggtgcaaggattcgctggccgtggaggcgtacgcggcgcgggccacggccaaggtaccgtacgagtcgcagggcacgggcgggcacaagcgcgcccagctcgagttcgcggcggtcgcgaacctgacgcgcgtggtgttccagagcttcaactaccacacgaagccggacgggacgctgtgcgggcctctcgtcgatgacatctccctcgtcagcgtacgcaagcgcgctgctcgcctccggcgcgtctcgcggcgtcccggactcatcctccctgcacagatcacacaagttgtaataagcaacagctcttatatatgtgagctcgcgcactggcccctcgcgaatcgcgaagttcgagtgctggaccgagtgacgagagctcatgatcatggtcttggcgaagtgcacgctctgcctggctcttgtggtggtggtgctcgttggcgtggctgcaccggtggtcttctctgtcaccgatggccttctaccaaacggcaacttcgagcacgggccggacaagtcccagctgaaccgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcaggacatgatcctggcggtgccggagggcgcacgccgtgcgccttggcaacgacgcaaccatccggcagcggatcagcgtcacctcgccgcgcgcacctgcgcccaggccgagaagctgaacgtgtccgtcacgccggtgttcggcgtgctcccgatccagaccgtgtacaccagcaccggctgggagtcctactcctgggccttcaaggccgaacacagcgccgtgtggctctccatccacaaccccagcgtcgaggaggacccggcctgcggcccactcatcgacctcgtcgccatcaagactcttcctcctccccatcacaccaggggtggtacaatgctgaggaacggggacttcgaggagggcccgtacatcttcgccgacacgccgtggggtgtcctggtgccgccgatggacgaggacgtgcactcgccgctgcccgggtggatggtcatgtcgaccacgaaggtcgtcaagtacgtggactcggcgcgccacgcggtgccgagcggcgcgcacgccgtggagatggtggccgggagggagtgcgcgctggtgcaggaggtggcgaccgtgcccgggcggtggtacacgctgtcgttctccgtcggggacgccggcaacaagtgcatcgggtcccttgccgtggacgcgtacgcggcgcgggcgacgctgaaggtgtcgtacgagtcgcggggcactggcgggcacgagcgcgccgagctcgtgttcgcggcggtcgccaaccggacgcgcgtggtgttccacagctccaaccaccatatgaagtcggacggcacgctgtgcggtcctgtggtcgatgacgtctccctccgtgccacgggcatcgacgaagatgcgtgctgtccctctagtacgtggcgtccggcccgcgagtgtcggcgtggtctcgcggccaaagctggggagctctcgtcggcgtgggagtccatctgcgatcatgacgaagggcgccacgcttttcatggagctgttcgtgctttgtcgtcggcgcgtctgctcgaccggttgttgatgttgttgacgacgagaactaggtag
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Protein seq | MRRKTEMVRSTCCVVLLLLLSVAARSASAIMDGLLPNGNFEEAPDKSQLNGTRVIGRYAIPQWEISGFVEYIGSGQMQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSVTFSAARTCAQSELLNITVTPEIGEVPIQTVYTSSGWDSYSWAFKARRSDVSLIVHNPGVTDDAACGPLIDSFAIKTLQSPPSTKDNLLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTIMGYTKSVKYVDAAHYAVPGGARAVELVAGMEAALVQEVCTVPGRSYRLEFSVGDAGDGCVGSMSVQAYVSHGSVKVPYESQGRGGYKRGVLEFTATDKRTRVVFVSMAYIMKPDGTLCGPVVDDASVVGVHNHRRLLLVGRREQPRARDSREGSHGMTGSARSVVALLFLLVGSAARADSTVTDGLLPNGNFEDGPDKSQLNGTVVTGRYAIPNWEISGFVEYIESGHREQDMILAVPEGARAVRLGNDATIRQRLSVTRRAYYSITFSAARTCAQKEKLNVSVTPEFGVLPIQTVYTSSGWDSYSWAFRAKHSVVWLSIHNPGEEEDPACGPLIDSIAIKNLYPPRRTKGNMLRNGDLEEGPYIFPDATWGVLVPPIFEDEHSPLPGWMIMSDTKVIKYVDSPHHRVPQGARAVELVAGRETALVQEVATVPGRSYRLSFSVGDAGNGCKDSLAVEAYAARATAKVPYESQGTGGHKRAQLEFAAVANLTRVVFQSFNYHTKPDGTLCGPLVDDISLVSVRKRAARLRRVSRRPGLILPAQITQVVISNSSYICELAHWPLANREVRVLDRVTRAHDHGLGEVHALPGSCGGGARWRGCTGGLLCHRWPSTKRQLRARAGQVPAEPNWEISGFVEYIGSGHKEQDMILAVPEGARRAPWQRRNHPAADQRHLAARTCAQAEKLNVSVTPVFGVLPIQTVYTSTGWESYSWAFKAEHSAVWLSIHNPSVEEDPACGPLIDLVAIKTLPPPHHTRGGTMLRNGDFEEGPYIFADTPWGVLVPPMDEDVHSPLPGWMVMSTTKVVKYVDSARHAVPSGAHAVEMVAGRECALVQEVATVPGRWYTLSFSVGDAGNKCIGSLAVDAYAARATLKVSYESRGTGGHERAELVFAAVANRTRVVFHSSNHHMKSDGTLCGPVVDDVSLRATGIDEDACCPSSTWRPARECRRGLAAKAGELSSAWESICDHDEGRHAFHGAVRALSSARLLDRLLMLLTTRTR
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.0 | 0.089713 | 0.0 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0495000 | RBH | 0.000000 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g41770 | RBH | 0.000000 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os04g0494900 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0018360 | SBH | 0.0 | 0.0 | 0.0 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0019140 | RBH | 0.0 | 0.0 | 0.0 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0018860 | RBH | 0.0 | 0.858136 | 0.0 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0018570 | SBH | 0.0 | 0.048770 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0018810 | RBH | 0.0 | 0.0 | 0.0 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0386100 | SBH | 0 | 0.260809 | 0 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0017590 | SBH | 0.0 | 0.0 | 0.0 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0386600 | SBH | 0.0355415 | 0.003324 | 0.0298035 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0018070 | RBH | 0.0 | 0.0 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0017930 | SBH | 0.0 | 0.000000 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0018020 | SBH | 0.0 | 0.0 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0018420 | RBH | 0.0 | 0.0 | 0.0 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0018580 | SBH | 0.0 | 4.092752 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G017860 | SBH | 0.0 | 1.205952 | 0.0 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0017820 | RBH | 0.0 | 0.0 | 0.0 |