Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsGoSa_04g0018020 | OGI:04075080 | 16/16 | GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | Chr04:26809654-26826730 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gcccatgcaaaagaaacagaatagcaagccaaaccaccatgtgaccccaggcaaacgcagacaacgccttccccggtcgccgcctcgccaagggaccccatttccacggcacctcagaaccgaggagagatgccctgccaacctcctcgatcgtggcggtccgcggatccggcgctcgtttcgctcggtttcctgcagaaaacacgctgtccatctggagttctggacatctggtctgaactctgaacaccgatccgttctctataattaagtgacagcatatcacaatctcctgtacagttctaaacctgtttgctgtccaatcccattgccaccttgcttacaaccaagtaataacaggagcagtacctgctcagagaggtgatgagaagaaaaacagagatgattcagactaccccctgcgtcgcgctgctcttgctcgtcggcgttgcttttgctgctcgatcggcgtcggctatcaccgatggtaagagccttccatagtacatttgccagcttaagatcgtacgtgcgatttagacggttaatcagttgcacgataaatttgtgacgctcatttctgcttagatagtactgaaaatgacgaaagatcgctgatatgttattctgtttgctgcgtgtatttttcaggcctgctgccgaatggcaacttcgaggaggcgccggacaagtcgcagatgaacggcacgagggtgacgggtcgctacgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagcagggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggcttaccctgacgcggggaatgcactactccatcacattcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacgatcacccccgagtccggcgagatccccatccagacggtgtacaccagcagcggctgggactcctactcctgggccttcaaggccaagcacagcgtcgtgttgttcatcgtccacaaccccggtgtctctgatgacgaagcttgcggccccctcatcgactcgttcgccattaagaccctgaaccctcctcaaagaacgaaaggtaattaattaattgagccgggtgctaacctctccacaaagctgctatcagtgtgcatctctacaaaattgaatacaaggatgtgctcacagtcatgaaacaatcgaacaaaatgaaccaggtaacatgctgaagaatgggggcttcgaggagggcccgtacatcttccccaacacgtcctggggcgtgcttgtgccgcccatggacgaggacgactactcgccgctgtccccgtggacgatcctgtcgaccaccaagtccgtcaagtacatcgacgcggcgcactacgctgtgccgggcggcgcccgcgcggttgagctggtgtccggcatggagacggcgatgctgcaggaggtgagcaccgtgcccgggcggtcgtacaggctggagttctccgtcggggacgccggcgacgggtgctccgggtccctgaccgtgcaggcgtacgcgtcgcgcgggagcgtgaaggtgacgtaccagtcgcagggcacgggcggctacaagcgcgggctgctcgagttcacggccacggagAaacggacgcgggtagtgttcgtcagcatggcctacaccacgaagtccgacggcacgctgtgtggtcccgtcatcgacgacgcgtcgctcgtcagtgtccgcagccaccgccggttccttctgtaatattattactatcgtcaaagtcactagaatttaaaatgacttaaagttgtcccataTgaaggaatatctcaattccttttatatgattcttatgccaaaagggtgagatgatttttttccgaggaaaaaaatgtgagatatctattatataattaaaggaatagaaaaaggagcctccacgttcgttctcatggcctagaaattctcacattaatcggagaaaaagaaaaaacagagtccatatagaaatacatttagaaatagctgaaattcggaattaaaaaataaggaatattagaagaggagacaagagtccatatagaaatacactttagaaacagttgaaattcggaattaaaaaataaggaatattagaagaggagtatagagtccatatagaaatacaattaggaaataatagaaattcggaattaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaggaaaataatagaaactctgaattaaaaataaggaatattagaagtagaatatataatccatatagaaatacaattaagaaaaaaaaatagaaactcggaattaaaaaataagaaatattacatgtacagagtccatataggaattaaaaaaatagaaattcggaattaaaaataagaaatattagaagtagagtatggagtccatatagaaatacaattaaGaaaaaaatagaaatttggaattaaaaaataagaaatattagaagtagagtatagagttcatattggaatttaaaaccaactaaacttcggaataaaaaggagcctccacgttcgctctcatggcctataaattctcacattaatcagagaaaaagaaaaagcagagtccatatagaaatacaatttagaaatagctgaaattcagaattaaaaaataaggaatattagaagaggagactagagtagttattacacattagtagttttgaaaagttattgcaatatttaaatttatgttttcattgtaatatattttaataatataatgataaaacatatatatgctattatatgagagaaaatataatgatactagccgcgcaatctgcgcgggccaccatgctagttatggatgcaattgatagaaaaccgggggtaattacataaccgtacatgcttattcgaatattgaatatgaccaggcccatgtttggatgcaaagaaacgaagtcagtagaaaagatgattgaatttgacttgtctcaactatcaagtcacaagtgtaatgtactcatttatgttagattattggaatcatgttttaaggttgagatcaagctcttcattagtagtcccagaggtaagcttcacgtctactacatctattctaaaataaacaaacatactatatacaatactctctccgtctcataatataaaaaagtaaaataaacaaacatactatatacaatactctctccatctcataatataaaaaagttttagagttatatactgttattaaaaaaataggtacaaataaatggtggagggttatgattggatgagtagtagaggtaggtgtaaaaagtgaatggtggagggttttgattggttgggaaaagaatgttggttgagaagttatattttgggataaatcatgaggactaaaaattgttatattttttgggacggagagggtattatgaatttagacaaactcttgtctatttgtaaactagaatacatcacatcttgtgctatatttgtatatttgtctattttagaatgaagggagtagtcaagatcattttaaattagactatggaataaacaattattccttctattaaaaaaaacatttctagccctcaaactTTAttaaacaaaatttcatttctaccttcctacctacttattggttcacAaaatcaagaagtttattctttgcctacaacttatctattatagtactaataactacatttttaattaacaatggacactttggttgtttacactaaccattagtttataaaccgatgattagaaatagagtttttctgggtcggaaataatggacatgttgcaaggtcctttaaaaagtcaaatatatttgtggctagtaaactttttgtcatgtgatatcttggtgcataaaaatctttaaaaatgtaaatccacaccgtttatgtttgcttaacgtaccatcactattccagaaatacaacgtatcatgttagagtataaaataggaaagtgttgttgaacatcctatatttttgcaaatactggacggtgttgcactatattatcacagaatgtttcacatattgcacaccacgatgaaaaatatttcaacgaaaatgtttcatatgtttcattaattgaggaaaaatattacatctttttaactgaaattcttgctttccgtcttgttgcttacaggtcctgcagtatcgtcatgtgtgattagtaatagcaacacaagccattagcatcaaatgaacgcattatcgtgtcaaaaaaagatcaacgcgttatagtgtggatctaaccagatttgggccacgacatttgtgtactacccagtgtgatagtgtgtcttaatcggtacggcagaaagtaaaatttttgggctagtgatttcggcctcatgggccagatcggcagaccaaaccacgtgtacacccaacacgaggcccgttttctcagccctagtcatccccacttgcccggatcaacgacgggagtcgccgcatcgggcggcgtgcaccagtaactgcagtttgtcacctcctcgcaggtcgccgccacagatgcagggaagggcggagttttgtaatggcaggtggccatgcgaacgagaaagaagggaaaggaatggccatgtgacattgtgaccccaagccaaacaccgcaacacgcagtcgcgccttccccagtcaccaacacgccgaggaactccatttccaccgcatctcaggacggagagatgccctgccaaccgcctcgatcgtggcggcccgtgcatccggagcgagttttgctcggcttgccgtaggaagcaaggtgcccaacttgccagcactagctccatccaggttcttccgtcaaaaaaagctccatccaggttacatcctctctgagcacgcatctcctctataactacaagtgccaacacagcactgtgatgcagcac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| CDS seq | atgagaagaaaaacagagatgattcagactaccccctgcgtcgcgctgctcttgctcgtcggcgttgcttttgctgctcgatcggcgtcggctatcaccgatggcctgctgccgaatggcaacttcgaggaggcgccggacaagtcgcagatgaacggcacgagggtgacgggtcgctacgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagcagggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggcttaccctgacgcggggaatgcactactccatcacattcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacgatcacccccgagtccggcgagatccccatccagacggtgtacaccagcagcggctgggactcctactcctgggccttcaaggccaagcacagcgtcgtgttgttcatcgtccacaaccccggtgtctctgatgacgaagcttgcggccccctcatcgactcgttcgccattaagaccctgaaccctcctcaaagaacgaaaggtaacatgctgaagaatgggggcttcgaggagggcccgtacatcttccccaacacgtcctggggcgtgcttgtgccgcccatggacgaggacgactactcgccgctgtccccgtggacgatcctgtcgaccaccaagtccgtcaagtacatcgacgcggcgcactacgctgtgccgggcggcgcccgcgcggttgagctggtgtccggcatggagacggcgatgctgcaggaggtgagcaccgtgcccgggcggtcgtacaggctggagttctccgtcggggacgccggcgacgggtgctccgggtccctgaccgtgcaggcgtacgcgtcgcgcgggagcgtgaaggtgacgtaccagtcgcagggcacgggcggctacaagcgcgggctgctcgagttcacggccacggagAaacggacgcgggtagtgttcgtcagcatggcctacaccacgaagtccgacggcacgctgtgtggtcccgtcatcgacgacgcgtcgctcgtcagtgtccgcagccaccgccggttccttctatattcagagtatagggagtacttcttgtcccgaaggcagctgatgagaaggaaaacagagatggtgcggagcacctgctgcgtggtgctgctcttgctcctcagcgttgctgctcgatcggcttcggccatcatggacggcctgctgccgaatggcaatttcgaggaggcgccggacaagtcgcagctgaacggcacgagggtgatcgggcgctacgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgcagggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggctcaccctgacgcggggaatgcactactccgtcaccttcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacggtcaccccggagatcggcgaggtccccatccagaccgtgtacaccagcagcggctgggactcctactcctgggcgttcaaggcgagacgcagcgacgtgtcgctcatcgttcacaaccctggcgtcaccgatgacgcggcctgcggccccctcatcgactcgttcgccatcaagactctgcaatctcctccaagcaccaaagataacttgctgaagaatgggggcttcgaggaaggcccgtacatcttccccaacacgtcgtggggcgtgcttgtgccgccgatggacgaggacgactactcgccactgtcgccatggacgatcatgggatacaccaagtccgtcaagtacgtggacgcggcgcactacgccgttccaggcggcgcacgcgcggtggagctggtggccggcatggaggcggcgctggtgcaggaggtgtgcaccgtgcccgggcggtcgtaccggctggagttctccgtcggggacgccggcgacgggtgcgtggggtccatgtccgtgcaggcgtacgtgtcgcacggcagcgtgaaggtgccgtacgagtcgcagggcaggggtgggtacaagcgcggggtgctcgagttcacggcgacggacaagcggacgcgggtggtgtttgtcagcatggcctacatcatgaagcccgacggcacgctctgtgggcccgtcgtcgacgacgcgtcggtcgtcggcgtccacagccatcgccggcttcttctagtcggacgtcgggagcagccgagagctcgcgactcgcgagaagggagccacggtatgactgggagcgcgcgtagcgtcgtggcgctgctcttcttgctcgtcggctcggctgctcgggccgattcaaccgtcaccgatggcctgttgccaaatggcaacttcgaggacgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccataccgaactgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgatcCTGGcggtgccggagggcgcgcgcgccgtgcgaTtgggcaacgacgccaccatccggcagaggcttagcgtgacgcggcgcgcttactactccatcactttcagcgcggcgcgcacctgcgcccagaaggagaagctgaacgtgtccgtcacaccggagttcggcgtgctcccgatccagacggtttacaccagcagcggctgggactcctactcctgggccttcagggccaaacacagcgtcgtgtggctctccatccacaaccccggcgaggaggaggacccggcgtgcggcccgctcattgactccattgccatcaagaacctctaccctccgcgccgcaccaaaggaaacatgttgagaaacggagacctggaggaggggccgtacatcttcccggacgcgacgtggggcgtgctggtgccaccgatcttcgaggacgagcactcgccgctgccggggtggatgatcatgtcggacacgaaggtcatcaagtacgtggactcgccgcaccacagggtgccgcagggcgcgcgcgccgtggagcttgtggccggcagggagaccgcgctggtgcaggaggtggcgaccgtgcccgggcggtcgtacaggctgtcgttctccgtcggggacgcgggcaacgggtgcaaggattcgctggccgtggaggcgtacgcggcgcgggccacggccaaggtgccgtacgagtcgcagggcacgggcgggcacaagcgcgcccagctcgagttcgcggcggtcgcgaacctgacgcgcgtggtgttccagagcttcaactaccacacgaagccggacgggacgctgtgcgggcctctcgtcgatgacatctccctcgtcagcgtacgcaagcgcgctgctcgcctccggcgcgtctcgcggcgtcccggactcatcctccctgcacagatcacacaagttgtaataagcaacagctcttatatatgtgagctcgcgcactggcccctcgcgaatcgcgaagttcgagtgctggaccgagtgacgagagctcatgatcatggtcttggcgaagtgcacgcgctgcctggctcttgtggtggtggtgctcgttggcgtggctgcaccggtggtcttctctgtcaccgatggccttctaccaaacggcaacttcgagcacgggccggacaagtcccagctgaaccgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcaggacatgatcctggcggtgccggagggcgcacgccgtgcgccttggcaacgacgcaaccatccggcagcggatcagcgtcaccccgccgcgcgcacctgcgcccaggccgagaagctgaacgtgtccgtcacgccggtgttcggcgtgctcccgatccagaccgtgtacaccagcaccggctgggagtcctactcctgggccttcaaggccgaacacagcgccgtgtggctctccatccacaaccccagcgtcgaggaggacccggcctgcggcccactcatcgacctcgtcgccatcaagactcttcctcctccccatcacaccaggggtggtacaatgctgaggaacggggacttcgaggagggcccgtacatcttcgccgacacgccgtggggtgtcctggtgccgccgatggacgaggacgtgcactcgccgctgcccgggtggatggtcatgtcgaccacgaaggtcgtcaagtacgtggactcggcgcgccacgcggtgccgagcggcgcgcacgccgtggagatggtggccgggagggagtgcgcgctggtgcaggaggtggcgaccgtgcccgggcggtggtacacgctgtcgttctccgtcggggacgccggcaacgggtgcatcgggtcccttgccgtggacgcgtacgcggcgcgggcgacgctgaaggtgtcgtacgagtcgcggggcactggcgggcacgagcgcgccgagctcgtgttcgcggcggtcgccaaccggacgcgcgtggtgttccacagctccaaccaccatatgaagtcggacggcacgctgtgcggtcctgtggtcgatgacgtctccctcgtcagtgtggacaagcacacggttcgccggttgttgatgtag
More
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| Protein seq | MRRKTEMIQTTPCVALLLLVGVAFAARSASAITDGLLPNGNFEEAPDKSQMNGTRVTGRYAIPQWEISGFVEYIGSGQKQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSITFSAARTCAQSELLNITITPESGEIPIQTVYTSSGWDSYSWAFKAKHSVVLFIVHNPGVSDDEACGPLIDSFAIKTLNPPQRTKGNMLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTILSTTKSVKYIDAAHYAVPGGARAVELVSGMETAMLQEVSTVPGRSYRLEFSVGDAGDGCSGSLTVQAYASRGSVKVTYQSQGTGGYKRGLLEFTATEKRTRVVFVSMAYTTKSDGTLCGPVIDDASLVSVRSHRRFLLYSEYREYFLSRRQLMRRKTEMVRSTCCVVLLLLLSVAARSASAIMDGLLPNGNFEEAPDKSQLNGTRVIGRYAIPQWEISGFVEYIGSGQMQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSVTFSAARTCAQSELLNITVTPEIGEVPIQTVYTSSGWDSYSWAFKARRSDVSLIVHNPGVTDDAACGPLIDSFAIKTLQSPPSTKDNLLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTIMGYTKSVKYVDAAHYAVPGGARAVELVAGMEAALVQEVCTVPGRSYRLEFSVGDAGDGCVGSMSVQAYVSHGSVKVPYESQGRGGYKRGVLEFTATDKRTRVVFVSMAYIMKPDGTLCGPVVDDASVVGVHSHRRLLLVGRREQPRARDSREGSHGMTGSARSVVALLFLLVGSAARADSTVTDGLLPNGNFEDGPDKSQLNGTVVTGRYAIPNWEISGFVEYIESGHREQDMILAVPEGARAVRLGNDATIRQRLSVTRRAYYSITFSAARTCAQKEKLNVSVTPEFGVLPIQTVYTSSGWDSYSWAFRAKHSVVWLSIHNPGEEEDPACGPLIDSIAIKNLYPPRRTKGNMLRNGDLEEGPYIFPDATWGVLVPPIFEDEHSPLPGWMIMSDTKVIKYVDSPHHRVPQGARAVELVAGRETALVQEVATVPGRSYRLSFSVGDAGNGCKDSLAVEAYAARATAKVPYESQGTGGHKRAQLEFAAVANLTRVVFQSFNYHTKPDGTLCGPLVDDISLVSVRKRAARLRRVSRRPGLILPAQITQVVISNSSYICELAHWPLANREVRVLDRVTRAHDHGLGEVHALPGSCGGGARWRGCTGGLLCHRWPSTKRQLRARAGQVPAEPNWEISGFVEYIGSGHKEQDMILAVPEGARRAPWQRRNHPAADQRHPAARTCAQAEKLNVSVTPVFGVLPIQTVYTSTGWESYSWAFKAEHSAVWLSIHNPSVEEDPACGPLIDLVAIKTLPPPHHTRGGTMLRNGDFEEGPYIFADTPWGVLVPPMDEDVHSPLPGWMVMSTTKVVKYVDSARHAVPSGAHAVEMVAGRECALVQEVATVPGRWYTLSFSVGDAGNGCIGSLAVDAYAARATLKVSYESRGTGGHERAELVFAAVANRTRVVFHSSNHHMKSDGTLCGPVVDDVSLVSVDKHTVRRLLM |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_04g0018020 | OsGoSa_04g0018020.02 | Chr04 | 26814649 | 26826730 | + | NAM | ||
| CDS seq | atgagaaggaaaacagagatggtgcggagcacctgctgcgtggtgctgctcttgctcctcagcgttgctgctcgatcggcttcggccatcatggacggcctgctgccgaatggcaatttcgaggaggcgccggacaagtcgcagctgaacggcacgagggtgatcgggcgctacgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgcagggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggctcaccctgacgcggggaatgcactactccgtcaccttcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacggtcaccccggagatcggcgaggtccccatccagaccgtgtacaccagcagcggctgggactcctactcctgggcgttcaaggcgagacgcagcgacgtgtcgctcatcgttcacaaccctggcgtcaccgatgacgcggcctgcggccccctcatcgactcgttcgccatcaagactctgcaatctcctccaagcaccaaagataacttgctgaagaatgggggcttcgaggaaggcccgtacatcttccccaacacgtcgtggggcgtgcttgtgccgccgatggacgaggacgactactcgccactgtcgccatggacgatcatgggatacaccaagtccgtcaagtacgtggacgcggcgcactacgccgttccaggcggcgcacgcgcggtggagctggtggccggcatggaggcggcgctggtgcaggaggtgtgcaccgtgcccgggcggtcgtaccggctggagttctccgtcggggacgccggcgacgggtgcgtggggtccatgtccgtgcaggcgtacgtgtcgcacggcagcgtgaaggtgccgtacgagtcgcagggcaggggtgggtacaagcgcggggtgctcgagttcacggcgacggacaagcggacgcgggtggtgtttgtcagcatggcctacatcatgaagcccgacggcacgctctgtgggcccgtcgtcgacgacgcgtcggtcgtcggcgtccacagccatcgccggcttcttctagtcggacgtcgggagcagccgagagctcgcgactcgcgagaagggagccacggtatgactgggagcgcgcgtagcgtcgtggcgctgctcttcttgctcgtcggctcggctgctcgggccgattcaaccgtcaccgatggcctgttgccaaatggcaacttcgaggacgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccataccgaactgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgatcCTGGcggtgccggagggcgcgcgcgccgtgcgaTtgggcaacgacgccaccatccggcagaggcttagcgtgacgcggcgcgcttactactccatcactttcagcgcggcgcgcacctgcgcccagaaggagaagctgaacgtgtccgtcacaccggagttcggcgtgctcccgatccagacggtttacaccagcagcggctgggactcctactcctgggccttcagggccaaacacagcgtcgtgtggctctccatccacaaccccggcgaggaggaggacccggcgtgcggcccgctcattgactccattgccatcaagaacctctaccctccgcgccgcaccaaaggaaacatgttgagaaacggagacctggaggaggggccgtacatcttcccggacgcgacgtggggcgtgctggtgccaccgatcttcgaggacgagcactcgccgctgccggggtggatgatcatgtcggacacgaaggtcatcaagtacgtggactcgccgcaccacagggtgccgcagggcgcgcgcgccgtggagcttgtggccggcagggagaccgcgctggtgcaggaggtggcgaccgtgcccgggcggtcgtacaggctgtcgttctccgtcggggacgcgggcaacgggtgcaaggattcgctggccgtggaggcgtacgcggcgcgggccacggccaaggtgccgtacgagtcgcagggcacgggcgggcacaagcgcgcccagctcgagttcgcggcggtcgcgaacctgacgcgcgtggtgttccagagcttcaactaccacacgaagccggacgggacgctgtgcgggcctctcgtcgatgacatctccctcgtcagcgtacgcaagcgcgctgctcgcctccggcgcgtctcgcggcgtcccggactcatcctccctgcacagatcacacaagttgtaataagcaacagctcttatatatgtgagctcgcgcactggcccctcgcgaatcgcgaagttcgagtgctggaccgagtgacgagagctcatgatcatggtcttggcgaagtgcacgcgctgcctggctcttgtggtggtggtgctcgttggcgtggctgcaccggtggtcttctctgtcaccgatggccttctaccaaacggcaacttcgagcacgggccggacaagtcccagctgaaccgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcaggacatgatcctggcggtgccggagggcgcacgccgtgcgccttggcaacgacgcaaccatccggcagcggatcagcgtcaccccgccgcgcgcacctgcgcccaggccgagaagctgaacgtgtccgtcacgccggtgttcggcgtgctcccgatccagaccgtgtacaccagcaccggctgggagtcctactcctgggccttcaaggccgaacacagcgccgtgtggctctccatccacaaccccagcgtcgaggaggacccggcctgcggcccactcatcgacctcgtcgccatcaagactcttcctcctccccatcacaccaggggtggtacaatgctgaggaacggggacttcgaggagggcccgtacatcttcgccgacacgccgtggggtgtcctggtgccgccgatggacgaggacgtgcactcgccgctgcccgggtggatggtcatgtcgaccacgaaggtcgtcaagtacgtggactcggcgcgccacgcggtgccgagcggcgcgcacgccgtggagatggtggccgggagggagtgcgcgctggtgcaggaggtggcgaccgtgcccgggcggtggtacacgctgtcgttctccgtcggggacgccggcaacgggtgcatcgggtcccttgccgtggacgcgtacgcggcgcgggcgacgctgaaggtgtcgtacgagtcgcggggcactggcgggcacgagcgcgccgagctcgtgttcgcggcggtcgccaaccggacgcgcgtggtgttccacagctccaaccaccatatgaagtcggacggcacgctgtgcggtcctgtggtcgatgacgtctccctcgtcagtgtggacaagcacacggttcgccggttgttgatgtag
More
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| Protein seq | MRRKTEMVRSTCCVVLLLLLSVAARSASAIMDGLLPNGNFEEAPDKSQLNGTRVIGRYAIPQWEISGFVEYIGSGQMQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSVTFSAARTCAQSELLNITVTPEIGEVPIQTVYTSSGWDSYSWAFKARRSDVSLIVHNPGVTDDAACGPLIDSFAIKTLQSPPSTKDNLLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTIMGYTKSVKYVDAAHYAVPGGARAVELVAGMEAALVQEVCTVPGRSYRLEFSVGDAGDGCVGSMSVQAYVSHGSVKVPYESQGRGGYKRGVLEFTATDKRTRVVFVSMAYIMKPDGTLCGPVVDDASVVGVHSHRRLLLVGRREQPRARDSREGSHGMTGSARSVVALLFLLVGSAARADSTVTDGLLPNGNFEDGPDKSQLNGTVVTGRYAIPNWEISGFVEYIESGHREQDMILAVPEGARAVRLGNDATIRQRLSVTRRAYYSITFSAARTCAQKEKLNVSVTPEFGVLPIQTVYTSSGWDSYSWAFRAKHSVVWLSIHNPGEEEDPACGPLIDSIAIKNLYPPRRTKGNMLRNGDLEEGPYIFPDATWGVLVPPIFEDEHSPLPGWMIMSDTKVIKYVDSPHHRVPQGARAVELVAGRETALVQEVATVPGRSYRLSFSVGDAGNGCKDSLAVEAYAARATAKVPYESQGTGGHKRAQLEFAAVANLTRVVFQSFNYHTKPDGTLCGPLVDDISLVSVRKRAARLRRVSRRPGLILPAQITQVVISNSSYICELAHWPLANREVRVLDRVTRAHDHGLGEVHALPGSCGGGARWRGCTGGLLCHRWPSTKRQLRARAGQVPAEPNWEISGFVEYIGSGHKEQDMILAVPEGARRAPWQRRNHPAADQRHPAARTCAQAEKLNVSVTPVFGVLPIQTVYTSTGWESYSWAFKAEHSAVWLSIHNPSVEEDPACGPLIDLVAIKTLPPPHHTRGGTMLRNGDFEEGPYIFADTPWGVLVPPMDEDVHSPLPGWMVMSTTKVVKYVDSARHAVPSGAHAVEMVAGRECALVQEVATVPGRWYTLSFSVGDAGNGCIGSLAVDAYAARATLKVSYESRGTGGHERAELVFAAVANRTRVVFHSSNHHMKSDGTLCGPVVDDVSLVSVDKHTVRRLLM
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsGoSa_04g0018020 | OsGoSa_04g0018020.01 | Chr04 | 26809654 | 26826730 | + | NAM | ||
| CDS seq | atgagaagaaaaacagagatgattcagactaccccctgcgtcgcgctgctcttgctcgtcggcgttgcttttgctgctcgatcggcgtcggctatcaccgatggcctgctgccgaatggcaacttcgaggaggcgccggacaagtcgcagatgaacggcacgagggtgacgggtcgctacgcgatacctcagtgggagatctccgggttcgtggagtacatcgggtcgggccagaagcagggagacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggcttaccctgacgcggggaatgcactactccatcacattcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacgatcacccccgagtccggcgagatccccatccagacggtgtacaccagcagcggctgggactcctactcctgggccttcaaggccaagcacagcgtcgtgttgttcatcgtccacaaccccggtgtctctgatgacgaagcttgcggccccctcatcgactcgttcgccattaagaccctgaaccctcctcaaagaacgaaaggtaacatgctgaagaatgggggcttcgaggagggcccgtacatcttccccaacacgtcctggggcgtgcttgtgccgcccatggacgaggacgactactcgccgctgtccccgtggacgatcctgtcgaccaccaagtccgtcaagtacatcgacgcggcgcactacgctgtgccgggcggcgcccgcgcggttgagctggtgtccggcatggagacggcgatgctgcaggaggtgagcaccgtgcccgggcggtcgtacaggctggagttctccgtcggggacgccggcgacgggtgctccgggtccctgaccgtgcaggcgtacgcgtcgcgcgggagcgtgaaggtgacgtaccagtcgcagggcacgggcggctacaagcgcgggctgctcgagttcacggccacggagAaacggacgcgggtagtgttcgtcagcatggcctacaccacgaagtccgacggcacgctgtgtggtcccgtcatcgacgacgcgtcgctcgtcagtgtccgcagccaccgccggttccttctatattcagagtatagggagtacttcttgtcccgaaggcagctgatgagaaggaaaacagagatggtgcggagcacctgctgcgtggtgctgctcttgctcctcagcgttgctgctcgatcggcttcggccatcatggacggcctgctgccgaatggcaatttcgaggaggcgccggacaagtcgcagctgaacggcacgagggtgatcgggcgctacgcgataccgcagtgggagatctccgggttcgtggagtacatcgggtcgggccagatgcagggtgacatgctcctgccggtgccggagggcgcgtacgccgtgcggctgggcaacgaggcctccatccagcagcggctcaccctgacgcggggaatgcactactccgtcaccttcagcgcggcgcgcacctgcgcccagtccgagctcctcaacatcacggtcaccccggagatcggcgaggtccccatccagaccgtgtacaccagcagcggctgggactcctactcctgggcgttcaaggcgagacgcagcgacgtgtcgctcatcgttcacaaccctggcgtcaccgatgacgcggcctgcggccccctcatcgactcgttcgccatcaagactctgcaatctcctccaagcaccaaagataacttgctgaagaatgggggcttcgaggaaggcccgtacatcttccccaacacgtcgtggggcgtgcttgtgccgccgatggacgaggacgactactcgccactgtcgccatggacgatcatgggatacaccaagtccgtcaagtacgtggacgcggcgcactacgccgttccaggcggcgcacgcgcggtggagctggtggccggcatggaggcggcgctggtgcaggaggtgtgcaccgtgcccgggcggtcgtaccggctggagttctccgtcggggacgccggcgacgggtgcgtggggtccatgtccgtgcaggcgtacgtgtcgcacggcagcgtgaaggtgccgtacgagtcgcagggcaggggtgggtacaagcgcggggtgctcgagttcacggcgacggacaagcggacgcgggtggtgtttgtcagcatggcctacatcatgaagcccgacggcacgctctgtgggcccgtcgtcgacgacgcgtcggtcgtcggcgtccacagccatcgccggcttcttctagtcggacgtcgggagcagccgagagctcgcgactcgcgagaagggagccacggtatgactgggagcgcgcgtagcgtcgtggcgctgctcttcttgctcgtcggctcggctgctcgggccgattcaaccgtcaccgatggcctgttgccaaatggcaacttcgaggacgggccggacaagtcccagctgaacggcacggtggtgacgggtcgatacgccataccgaactgggagatctcggggttcgtggagtacatcgagtccgggcacagggagcaggacatgatcCTGGcggtgccggagggcgcgcgcgccgtgcgaTtgggcaacgacgccaccatccggcagaggcttagcgtgacgcggcgcgcttactactccatcactttcagcgcggcgcgcacctgcgcccagaaggagaagctgaacgtgtccgtcacaccggagttcggcgtgctcccgatccagacggtttacaccagcagcggctgggactcctactcctgggccttcagggccaaacacagcgtcgtgtggctctccatccacaaccccggcgaggaggaggacccggcgtgcggcccgctcattgactccattgccatcaagaacctctaccctccgcgccgcaccaaaggaaacatgttgagaaacggagacctggaggaggggccgtacatcttcccggacgcgacgtggggcgtgctggtgccaccgatcttcgaggacgagcactcgccgctgccggggtggatgatcatgtcggacacgaaggtcatcaagtacgtggactcgccgcaccacagggtgccgcagggcgcgcgcgccgtggagcttgtggccggcagggagaccgcgctggtgcaggaggtggcgaccgtgcccgggcggtcgtacaggctgtcgttctccgtcggggacgcgggcaacgggtgcaaggattcgctggccgtggaggcgtacgcggcgcgggccacggccaaggtgccgtacgagtcgcagggcacgggcgggcacaagcgcgcccagctcgagttcgcggcggtcgcgaacctgacgcgcgtggtgttccagagcttcaactaccacacgaagccggacgggacgctgtgcgggcctctcgtcgatgacatctccctcgtcagcgtacgcaagcgcgctgctcgcctccggcgcgtctcgcggcgtcccggactcatcctccctgcacagatcacacaagttgtaataagcaacagctcttatatatgtgagctcgcgcactggcccctcgcgaatcgcgaagttcgagtgctggaccgagtgacgagagctcatgatcatggtcttggcgaagtgcacgcgctgcctggctcttgtggtggtggtgctcgttggcgtggctgcaccggtggtcttctctgtcaccgatggccttctaccaaacggcaacttcgagcacgggccggacaagtcccagctgaaccgaactgggagatctctgggttcgtggagtacatcgggtccgggcacaaggagcaggacatgatcctggcggtgccggagggcgcacgccgtgcgccttggcaacgacgcaaccatccggcagcggatcagcgtcaccccgccgcgcgcacctgcgcccaggccgagaagctgaacgtgtccgtcacgccggtgttcggcgtgctcccgatccagaccgtgtacaccagcaccggctgggagtcctactcctgggccttcaaggccgaacacagcgccgtgtggctctccatccacaaccccagcgtcgaggaggacccggcctgcggcccactcatcgacctcgtcgccatcaagactcttcctcctccccatcacaccaggggtggtacaatgctgaggaacggggacttcgaggagggcccgtacatcttcgccgacacgccgtggggtgtcctggtgccgccgatggacgaggacgtgcactcgccgctgcccgggtggatggtcatgtcgaccacgaaggtcgtcaagtacgtggactcggcgcgccacgcggtgccgagcggcgcgcacgccgtggagatggtggccgggagggagtgcgcgctggtgcaggaggtggcgaccgtgcccgggcggtggtacacgctgtcgttctccgtcggggacgccggcaacgggtgcatcgggtcccttgccgtggacgcgtacgcggcgcgggcgacgctgaaggtgtcgtacgagtcgcggggcactggcgggcacgagcgcgccgagctcgtgttcgcggcggtcgccaaccggacgcgcgtggtgttccacagctccaaccaccatatgaagtcggacggcacgctgtgcggtcctgtggtcgatgacgtctccctcgtcagtgtggacaagcacacggttcgccggttgttgatgtag
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| Protein seq | MRRKTEMIQTTPCVALLLLVGVAFAARSASAITDGLLPNGNFEEAPDKSQMNGTRVTGRYAIPQWEISGFVEYIGSGQKQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSITFSAARTCAQSELLNITITPESGEIPIQTVYTSSGWDSYSWAFKAKHSVVLFIVHNPGVSDDEACGPLIDSFAIKTLNPPQRTKGNMLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTILSTTKSVKYIDAAHYAVPGGARAVELVSGMETAMLQEVSTVPGRSYRLEFSVGDAGDGCSGSLTVQAYASRGSVKVTYQSQGTGGYKRGLLEFTATEKRTRVVFVSMAYTTKSDGTLCGPVIDDASLVSVRSHRRFLLYSEYREYFLSRRQLMRRKTEMVRSTCCVVLLLLLSVAARSASAIMDGLLPNGNFEEAPDKSQLNGTRVIGRYAIPQWEISGFVEYIGSGQMQGDMLLPVPEGAYAVRLGNEASIQQRLTLTRGMHYSVTFSAARTCAQSELLNITVTPEIGEVPIQTVYTSSGWDSYSWAFKARRSDVSLIVHNPGVTDDAACGPLIDSFAIKTLQSPPSTKDNLLKNGGFEEGPYIFPNTSWGVLVPPMDEDDYSPLSPWTIMGYTKSVKYVDAAHYAVPGGARAVELVAGMEAALVQEVCTVPGRSYRLEFSVGDAGDGCVGSMSVQAYVSHGSVKVPYESQGRGGYKRGVLEFTATDKRTRVVFVSMAYIMKPDGTLCGPVVDDASVVGVHSHRRLLLVGRREQPRARDSREGSHGMTGSARSVVALLFLLVGSAARADSTVTDGLLPNGNFEDGPDKSQLNGTVVTGRYAIPNWEISGFVEYIESGHREQDMILAVPEGARAVRLGNDATIRQRLSVTRRAYYSITFSAARTCAQKEKLNVSVTPEFGVLPIQTVYTSSGWDSYSWAFRAKHSVVWLSIHNPGEEEDPACGPLIDSIAIKNLYPPRRTKGNMLRNGDLEEGPYIFPDATWGVLVPPIFEDEHSPLPGWMIMSDTKVIKYVDSPHHRVPQGARAVELVAGRETALVQEVATVPGRSYRLSFSVGDAGNGCKDSLAVEAYAARATAKVPYESQGTGGHKRAQLEFAAVANLTRVVFQSFNYHTKPDGTLCGPLVDDISLVSVRKRAARLRRVSRRPGLILPAQITQVVISNSSYICELAHWPLANREVRVLDRVTRAHDHGLGEVHALPGSCGGGARWRGCTGGLLCHRWPSTKRQLRARAGQVPAEPNWEISGFVEYIGSGHKEQDMILAVPEGARRAPWQRRNHPAADQRHPAARTCAQAEKLNVSVTPVFGVLPIQTVYTSTGWESYSWAFKAEHSAVWLSIHNPSVEEDPACGPLIDLVAIKTLPPPHHTRGGTMLRNGDFEEGPYIFADTPWGVLVPPMDEDVHSPLPGWMVMSTTKVVKYVDSARHAVPSGAHAVEMVAGRECALVQEVATVPGRWYTLSFSVGDAGNGCIGSLAVDAYAARATLKVSYESRGTGGHERAELVFAAVANRTRVVFHSSNHHMKSDGTLCGPVVDDVSLVSVDKHTVRRLLM
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0495000 | RBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g41710 | RBH | 0.0 | 0.0 | 0.238897 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0495000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0018360 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0019140 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0018850 | SBH | 0.0 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0018560 | SBH | 0.0 | 0.263228 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0018800 | RBH | 0.0 | 2.256930 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0386400 | RBH | 0.014882 | 0.30196 | 0.0147495 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0017570 | RBH | 0.0 | 0.446388 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0386300 | RBH | 0.0188665 | 0 | 0.0310115 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0018080 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0017920 | RBH | 0.0 | 6.262282 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0018010 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0018420 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0018590 | SBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G017860 | RBH | 0.0 | 1.205952 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0017810 | RBH | 0.0 | 0.0 | 0.0 |
