Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_04g0014640 | OGI:04067170 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr04:23778778-23780919 | ||||||||
| Gene Symbol | OsFbox211, Os_F0331 | ||||||||||
| DNA seq | ctagagagggagcatatggtgaaacatcagaaggttggtggtgaaatccagcactttcccccatttctcgttgggtccccaatactcgatggatcccgggaactcccggggtttggaggttgaggcaaggcatggagcgccagaggtgtacccacctcttggagagcacgcaggtctgcacggcttgccgggcgcggggaggaaggacatgacggcgtggaggaggccatccggcagggcgctcagccgatcgccggcggcggacccgcctccgcccgcacgggacggccgcttggcgacgggctccatggcggaagtcctgcagttctgcacgggcgcgtggcacgtgcggcaaggagctgtgcagaggagagggttttgggggcgagaaatttggaagagaaggggataacggcaacagtgtagaactgtagatacgtggatgggtaattcgtgtattttttttcgactcctcggaacaggtagaatagcaggctataaaccagctataaacatatttcgaggagataaaagataagagaaaatagtagtgggctagatttgtaaatagtactgactttaaggtgtatgtgtgtatgacagataggaccagatattagttatgagaatagtagtgggccagatttgtaaccggctgtagtactaactttaaggtgtatgtgtgtatgacagatgagaccagatattagttatatagtatatgtttataggtaactattgtatgagttggtcattaagtcgactatagatgattctctttttgatgtaaaattttaacaaaatgccattctaaaaacctaatatattaacagctccaactttacgaattaaaatttaaagtaacattatttttcataattttgcatacacacatgtttttaaaatatttacgaaaatatgcatttcctgcgagttggggccataccaccagcgatgctggaagatgtgggactgaggggagggggtggtggcgcggagcaaacacacgcgaccgcattggtcctgcgcagcacatacgcgctgtcatgaatgtggcatggaggcggtcggtctcgcgtgaccaatccgtaggaacacgtgcggttgagcgtgaccaatttgctggaccgtccctgtcgtcactttcactcctttcccgctgcacttacggagcagtggcccgacttcaacccatgggcaatgtgtatttccatacatatttcaaaaatttaattcccgcctttcaagatattattttgggactaagaaaacataggttaaaaaaaagttggaggacattttgggactgtgattaataaaacatagcttaaaaaaatttggagccgggacaaacagagcccaaatcatacatggaacataaacacttttgtaaaggcaaattaaagtagtacttccataattccagcaaactaggggcgccttacctttgcctgtataccttcgagctcaaggtcgtcacatttaccatgccggcgagaagcacggcttcaacccccgtcggcaacgcgcgccgccgccgccgccgccccaccctgatcgacgcctccacgagcgaatccgccgtggagccatcgaacgaaacgccatgcctgcacgcgtacgacgtgatcttcacgcgcacggaggcgaggcgcggcgcgctgatcaccagcgtctcctcctcctcctcctcgtcgccgccgccggcgtcgccgccaccacagcccgtgtagtggagcacgagcgtcctcagcgagccgcaccggatgcggcggaaccccggcgccatggcgcacctgcggagcgccaggtcctcgaggagagggcagccgtcgccgagctgctcgccgaagccgccgtccagccacgcgtgggacaggtgcaatctcgtgaggcgccgccatgcgcgggaggtgatgatcagatccggcatggtgtagccgtcgtagtggccggggggatacgagggggtgacgacgttgatctcgagcaccgtggccggagcccggcggcggcgcggacccatctctcgacggattcacgccgggcggcgccgaggtgatccacgaagaggcggaacgagtccacggccgtctcgtcgcgggatctgagcctgagcagggtggtgacgaaggcgtccat
More
|
||||||||||
| CDS seq | atggacgccttcgtcaccaccctgctcaggctcagatcccgcgacgagacggccgtggactcgttccgcctcttcgtggatcacctcggcgccgcccggcagatgggtccgcgccgccgccgggctccggccacggtgctcgagatcaacgtcgtcaccccctcgtatccccccggccactacgacggctacaccatgccggatctgatcatcacctcccgcgcatggcggcgcctcacgagattgcacctgtcccacgcgtggctggacggcggcttcggcgagcagctcggcgacggctgccctctcctcgaggacctggcgctccgcaggtgcgccatggcgccggggttccgccgcatccggtgcggctcgctgaggacgctcgtgctccactacacgggctgtggtggcggcgacgccggcggcggcgacgaggaggaggaggaggagacgctggtgatcagcgcgccgcgcctcgcctccgtgcgcgtgaagatcacgtcgtacgcgtgcaggcatggcgtttcgttcgatggctccacggcggattcgctcgtggaggcgtcgatcagggtggggcggcggcggcggcggcgcgcgttgccgacgggggttgaagccgtgcttctcgccggcatggtaaatgtgacgaccttgagctcgaagcccgtcgccaagcggccgtcccgtgcgggcggaggcgggtccgccgccggcgatcggctgagcgccctgccggatggcctcctccacgccgtcatgtccttcctccccgcgcccggcaagccgtgcagacctgcgtgctctccaagaggtgggtacacctctggcgctccatgccttgcctcaacctccaaaccccgggagttcccgggatccatcgagtattggggacccaacgagaaatgggggaaagtgctggatttcaccaccaaccttctgatgtttcaccatatgctccctctctag
More
|
||||||||||
| Protein seq | MDAFVTTLLRLRSRDETAVDSFRLFVDHLGAARQMGPRRRRAPATVLEINVVTPSYPPGHYDGYTMPDLIITSRAWRRLTRLHLSHAWLDGGFGEQLGDGCPLLEDLALRRCAMAPGFRRIRCGSLRTLVLHYTGCGGGDAGGGDEEEEEETLVISAPRLASVRVKITSYACRHGVSFDGSTADSLVEASIRVGRRRRRRALPTGVEAVLLAGMVNVTTLSSKPVAKRPSRAGGGGSAAGDRLSALPDGLLHAVMSFLPAPGKPCRPACSPRGGYTSGAPCLASTSKPREFPGSIEYWGPNEKWGKVLDFTTNLLMFHHMLPL |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_04g0014640 | OsLiXu_04g0014640.01 | Chr04 | 23778778 | 23780919 | - | NAM | ||
| CDS seq | atggacgccttcgtcaccaccctgctcaggctcagatcccgcgacgagacggccgtggactcgttccgcctcttcgtggatcacctcggcgccgcccggcagatgggtccgcgccgccgccgggctccggccacggtgctcgagatcaacgtcgtcaccccctcgtatccccccggccactacgacggctacaccatgccggatctgatcatcacctcccgcgcatggcggcgcctcacgagattgcacctgtcccacgcgtggctggacggcggcttcggcgagcagctcggcgacggctgccctctcctcgaggacctggcgctccgcaggtgcgccatggcgccggggttccgccgcatccggtgcggctcgctgaggacgctcgtgctccactacacgggctgtggtggcggcgacgccggcggcggcgacgaggaggaggaggaggagacgctggtgatcagcgcgccgcgcctcgcctccgtgcgcgtgaagatcacgtcgtacgcgtgcaggcatggcgtttcgttcgatggctccacggcggattcgctcgtggaggcgtcgatcagggtggggcggcggcggcggcggcgcgcgttgccgacgggggttgaagccgtgcttctcgccggcatggtaaatgtgacgaccttgagctcgaagcccgtcgccaagcggccgtcccgtgcgggcggaggcgggtccgccgccggcgatcggctgagcgccctgccggatggcctcctccacgccgtcatgtccttcctccccgcgcccggcaagccgtgcagacctgcgtgctctccaagaggtgggtacacctctggcgctccatgccttgcctcaacctccaaaccccgggagttcccgggatccatcgagtattggggacccaacgagaaatgggggaaagtgctggatttcaccaccaaccttctgatgtttcaccatatgctccctctctag
More
|
|||||||
| Protein seq | MDAFVTTLLRLRSRDETAVDSFRLFVDHLGAARQMGPRRRRAPATVLEINVVTPSYPPGHYDGYTMPDLIITSRAWRRLTRLHLSHAWLDGGFGEQLGDGCPLLEDLALRRCAMAPGFRRIRCGSLRTLVLHYTGCGGGDAGGGDEEEEEETLVISAPRLASVRVKITSYACRHGVSFDGSTADSLVEASIRVGRRRRRRALPTGVEAVLLAGMVNVTTLSSKPVAKRPSRAGGGGSAAGDRLSALPDGLLHAVMSFLPAPGKPCRPACSPRGGYTSGAPCLASTSKPREFPGSIEYWGPNEKWGKVLDFTTNLLMFHHMLPL
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0440300 | SBH | 0.0 | 0.0 | 0.375766 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g36010 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0440300 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0014320 | SBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0015160 | RBH | 0.0 | 0.0 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0014910 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0014480 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0014810 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0342400 | SBH | 0.010292 | 0 | 0.0111235 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0013740 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0338700 | SBH | 0.009455 | 0.013374 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0014270 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0014060 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0014020 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0014850 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G013900 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0013920 | RBH | 0.0 | 0.0 | 0.0 |
