Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| Os04g0440300 | OGI:04067100 | 16/16 | Nipponbare | IRGSP 1.0 | RAP-db | Chr04:21912154-21914363 | ||||||||
| Gene Symbol | OsFbox186, Os_F0322, OsFbox210, OsFbox211, Os_F0331, OsFbox212, Os_F0238, OsFbox213, Os_F0422, OsFbox214, Os_F0430, OsFbox215, Os_F0110 | ||||||||||
| DNA seq | GAACATGCTCTATAGTAAGAAATTGGTCTGTTCATAGCCATAAGTATCAATCGCTATCACTTCATTAACCTAGCATCACAGCGCGCAAGAACACATGCAATAGCTAACAGAACAGAGCAGTCTTAAACCGATTAGACAAGTCAAAAGATAGGTGCATTTCAACTACACAACTGACAGTGCATCGGAAGACAGACAAGACATGTGAATTCAGGAGAGGCCTAAGAATCGGTCATCACAAAAGAGGGCCTGAACTAACCATACTAACGATCAACTTTGCTGAGTTTTATGTTGTTCTTAGGAAGATTTGCTGAATCGTTCAGCAAAAGCCCGACCAGTTGGAGGACATCATCAGCATCGTAGATGATTTCAGTAAGCTTTAGGTTCTCACACCGGATATCCACCAAACGTGTTTTCTTCGCCTTGGCCTTCCCTTTCCTTTTCTTAGAATCCTTTGGCAGCTGTTGGCAGTATAGTAAAGGATGTCCAATAATGAGCCAAATTTAATTATGTAAGAATGTTAAGGCCAAAATAAGAGCATGAATACCTCGCAAAGCCGCAACGTGAGCTTCTCCAAATTAGGCGAGTTCTGCAGAAAGTGCTTCAATAACTGGAAGTTGTCACTAAGATCACACTTGTCAAGGGATAAGATCTTGAGGTTCTTGAATTCTGGTAACTCAACCGGTTCCTCAGGTATAATCTGAAATATATAATGCTGAAATGGCACCACAAGGTAAACGTATAGAAGAAGCAAGTCTGTGAAGACAGAATACATACCATTGTCTGAAAACCTGACAGCTCTAAAGTTGTCACATTACAGAGGCTACCAAGAAACTTGCTTTGATTGTGTTGGAAGTTCTTTCCGTCGTAGGTGGCTGAAACAAGAATGGATGCTTTCGAAAGGAATGGCATTTCATTTACAATGAGACCGCCGGGGAAAAACCACAATTTCACAATAAGGCACAGGGAGGCAATGGCAGGAGCCGTGACAACCAGTTTGGAAGGACAAAGCTTGCTGTCGCAGCTGTCGATCACCAAGCTCTTCAGTGAGTGGGACGTGATCTCATTGAATGCAAATCTGCATCCTTTGAGATTCAAATCCTCCAGAGAGCAGCACATTGAGCTAATGTGCTTTGCGAACAGATCATCCACACAAATGTTAGAAAGATGTAGTCTTTTGAGGCTCCAAGAACTGCAGCTCAATCCCGGGCGAGGAATGCCAGGAACCTTGGTGTTATACTTGATGCTGCGACGAATCCACCTAGATGCATGTTGACCCCAACGATACACATTATTAACATGCAGCTGGAACGTATCCAGGTGTGCAATCTGGTGATGAAGCATCAGGTTGTCCGCAAAATCCTCAAAATTCTGCCACACCTCATTGTCGCCCTGTGCAGCTTCACCTGTGCTTTGGAACTCCCGATGATCTACATCGAGGCACGGCACGGTGCGCCAGAGGTGCTCCCACCTCTTGGACAGCATGCACGTCTGCACCACCTGCCTGGCCTTCATGAAGGACATGATGACATGGAGGAGGCAGTCCGGCAACGCGCTGAGCCGATCGACGGCGACGCCACTTTCACGGGGCCGCTTTCGTGTGGTGTCCAGATCCATGGAGACCTGGAGAGCTCTGCTCTCGGAGCAATTCCACTGCAGTCTACAAGAGTGCCAAAAATATTGCATCAACCACAGTAATCCCCATTTCCATATATATAGCGAATTCACAAAATCAGCTTAAGCTTGAAAAGGAGATGCAACTAGCAGATCATAGTGGCTGATGCAGGATTTCAATTATAAAAAACCCTCTTTTTTTTTCCTGGTAACGGCTTATTATCCCCAATCCCCTCCAATCTCCACGGGATATATAAGGGATTAGACGAACAAAAGCCCTATAAATTCTCCACTTCCATTTCTTACCTGAACCCACACAATCACCAAACTTAAAAACGGGAGATCCTTTGCTACATCAGTAACTGAATCAAGAATTTTCCAACCAAACTCAAAGCATTACTCCAGTACATTGGACTCGACCGAACATAAATAAACATTAGAGAGGTTTGAAGAGATGCAGGAAAAAAAATAAACCGTCGGAGAGATGGGATCGCCGGGGACTAACGTCGGAGCAGCCGGCCGTCGCTGCACAAGGCCCAGCCGCGTCGCCGGAGCCTCGGAGATAGCGCGCAAGACCGATGGAGTCGAGACCCACGGAC
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| CDS seq | CCGTGGGTCTCGACTCCATCGGTCTTGCGCGCTATCTCCGAGGCTCCGGCGACGCGGCTGGGCCTTGTGCAGCGACGGCCGGCTGCTCCGACACTGCAGTGGAATTGCTCCGAGAGCAGAGCTCTCCAGGTCTCCATGGATCTGGACACCACACGAAAGCGGCCCCGTGAAAGTGGCGTCGCCGTCGATCGGCTCAGCGCGTTGCCGGACTGCCTCCTCCATGTCATCATGTCCTTCATGAAGGCCAGGCAGGTGGTGCAGACGTGCATGCTGTCCAAGAGGTGGGAGCACCTCTGGCGCACCGTGCCGTGCCTCGATGTAGATCATCGGGAGTTCCAAAGCACAGGTGAAGCTGCACAGGGCGACAATGAGGTGTGGCAGAATTTTGAGGATTTTGCGGACAACCTGATGCTTCATCACCAGATTGCACACCTGGATACGTTCCAGCTGCATGTTAATAATGTGTATCGTTGGGGTCAACATGCATCTAGGTGGATTCGTCGCAGCATCAAGTATAACACCAAGGTTCCTGGCATTCCTCGCCCGGGATTGAGCTGCAGTTCTTGGAGCCTCAAAAGACTACATCTTTCTAACATTTGTGTGGATGATCTGTTCGCAAAGCACATTAGCTCAATGTGCTGCTCTCTGGAGGATTTGAATCTCAAAGGATGCAGATTTGCATTCAATGAGATCACGTCCCACTCACTGAAGAGCTTGGTGATCGACAGCTGCGACAGCAAGCTTTGTCCTTCCAAACTGGTTGTCACGGCTCCTGCCATTGCCTCCCTGTGCCTTATTGTGAAATTGTGGTTTTTCCCCGGCGGTCTCATTGTAAATGAAATGCCATTCCTTTCGAAAGCATCCATTCTTGTTTCAGCCACCTACGACGGAAAGAACTTCCAACACAATCAAAGCAAGTTTCTTGGTAGCCTCTGTAATGTGACAACTTTAGAGCTGTCAGGTTTTCAGACAATGATTATACCTGAGGAACCGGTTGAGTTACCAGAATTCAAGAACCTCAAGATCTTATCCCTTGACAAGTGTGATCTTAGTGACAACTTCCAGTTATTGAAGCACTTTCTGCAGAACTCGCCTAATTTGGAGAAGCTCACGTTGCGGCTTTGCGAGCTGCCAAAGGATTCTAAGAAAAGGAAAGGGAAGGCCAAGGCGAAGAAAACACGTTTGGTGGATATCCGGTGTGAGAACCTAAAGCTTACTGAAATCATCTACGATGCTGATGATGTCCTCCAACTGGTCGGGCTTTTGCTGAACGATTCAGCAAATCTTCCTAAGAACAACATAAAACTCAGCAAAGTTGATCGTTAG
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| Protein seq | PWVSTPSVLRAISEAPATRLGLVQRRPAAPTLQWNCSESRALQVSMDLDTTRKRPRESGVAVDRLSALPDCLLHVIMSFMKARQVVQTCMLSKRWEHLWRTVPCLDVDHREFQSTGEAAQGDNEVWQNFEDFADNLMLHHQIAHLDTFQLHVNNVYRWGQHASRWIRRSIKYNTKVPGIPRPGLSCSSWSLKRLHLSNICVDDLFAKHISSMCCSLEDLNLKGCRFAFNEITSHSLKSLVIDSCDSKLCPSKLVVTAPAIASLCLIVKLWFFPGGLIVNEMPFLSKASILVSATYDGKNFQHNQSKFLGSLCNVTTLELSGFQTMIIPEEPVELPEFKNLKILSLDKCDLSDNFQLLKHFLQNSPNLEKLTLRLCELPKDSKKRKGKAKAKKTRLVDIRCENLKLTEIIYDADDVLQLVGLLLNDSANLPKNNIKLSKVDR |
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| Function | MEIOTIC F-BOX protein MOF [UniProtKB/Swiss-Prot:Q7X7A4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| Os04g0440300 | Os04t0440300-01 | Chr04 | 21912154 | 21914363 | - | irgsp1_rep | ||
| CDS seq | CCGTGGGTCTCGACTCCATCGGTCTTGCGCGCTATCTCCGAGGCTCCGGCGACGCGGCTGGGCCTTGTGCAGCGACGGCCGGCTGCTCCGACACTGCAGTGGAATTGCTCCGAGAGCAGAGCTCTCCAGGTCTCCATGGATCTGGACACCACACGAAAGCGGCCCCGTGAAAGTGGCGTCGCCGTCGATCGGCTCAGCGCGTTGCCGGACTGCCTCCTCCATGTCATCATGTCCTTCATGAAGGCCAGGCAGGTGGTGCAGACGTGCATGCTGTCCAAGAGGTGGGAGCACCTCTGGCGCACCGTGCCGTGCCTCGATGTAGATCATCGGGAGTTCCAAAGCACAGGTGAAGCTGCACAGGGCGACAATGAGGTGTGGCAGAATTTTGAGGATTTTGCGGACAACCTGATGCTTCATCACCAGATTGCACACCTGGATACGTTCCAGCTGCATGTTAATAATGTGTATCGTTGGGGTCAACATGCATCTAGGTGGATTCGTCGCAGCATCAAGTATAACACCAAGGTTCCTGGCATTCCTCGCCCGGGATTGAGCTGCAGTTCTTGGAGCCTCAAAAGACTACATCTTTCTAACATTTGTGTGGATGATCTGTTCGCAAAGCACATTAGCTCAATGTGCTGCTCTCTGGAGGATTTGAATCTCAAAGGATGCAGATTTGCATTCAATGAGATCACGTCCCACTCACTGAAGAGCTTGGTGATCGACAGCTGCGACAGCAAGCTTTGTCCTTCCAAACTGGTTGTCACGGCTCCTGCCATTGCCTCCCTGTGCCTTATTGTGAAATTGTGGTTTTTCCCCGGCGGTCTCATTGTAAATGAAATGCCATTCCTTTCGAAAGCATCCATTCTTGTTTCAGCCACCTACGACGGAAAGAACTTCCAACACAATCAAAGCAAGTTTCTTGGTAGCCTCTGTAATGTGACAACTTTAGAGCTGTCAGGTTTTCAGACAATGATTATACCTGAGGAACCGGTTGAGTTACCAGAATTCAAGAACCTCAAGATCTTATCCCTTGACAAGTGTGATCTTAGTGACAACTTCCAGTTATTGAAGCACTTTCTGCAGAACTCGCCTAATTTGGAGAAGCTCACGTTGCGGCTTTGCGAGCTGCCAAAGGATTCTAAGAAAAGGAAAGGGAAGGCCAAGGCGAAGAAAACACGTTTGGTGGATATCCGGTGTGAGAACCTAAAGCTTACTGAAATCATCTACGATGCTGATGATGTCCTCCAACTGGTCGGGCTTTTGCTGAACGATTCAGCAAATCTTCCTAAGAACAACATAAAACTCAGCAAAGTTGATCGTTAG
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| Protein seq | PWVSTPSVLRAISEAPATRLGLVQRRPAAPTLQWNCSESRALQVSMDLDTTRKRPRESGVAVDRLSALPDCLLHVIMSFMKARQVVQTCMLSKRWEHLWRTVPCLDVDHREFQSTGEAAQGDNEVWQNFEDFADNLMLHHQIAHLDTFQLHVNNVYRWGQHASRWIRRSIKYNTKVPGIPRPGLSCSSWSLKRLHLSNICVDDLFAKHISSMCCSLEDLNLKGCRFAFNEITSHSLKSLVIDSCDSKLCPSKLVVTAPAIASLCLIVKLWFFPGGLIVNEMPFLSKASILVSATYDGKNFQHNQSKFLGSLCNVTTLELSGFQTMIIPEEPVELPEFKNLKILSLDKCDLSDNFQLLKHFLQNSPNLEKLTLRLCELPKDSKKRKGKAKAKKTRLVDIRCENLKLTEIIYDADDVLQLVGLLLNDSANLPKNNIKLSKVDR
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | None | None | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0440300 | RBH | 0.0 | 0.0 | 0.375766 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g35940 | RBH | 0.0 | 0.0 | 0.093777 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0440400 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0014270 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0015120 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0014860 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0014450 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0014770 | RBH | 0.0 | 1.394399 | 3.529621 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0342200 | RBH | 0.79592 | 5.417677 | 14.5450275 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0013690 | RBH | 0.000000 | 0.122254 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0338500 | RBH | 0.7668175 | 3.542084 | 12.279178 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0014230 | RBH | 0.0 | 0.072619 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0014010 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0013980 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0014600 | RBH | 0.0 | 0.0 | 0.548284 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0014800 | RBH | 0.0 | 1.691060 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G013860 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0013880 | RBH | 0.0 | 0.000000 | 3.250405 |
