Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_03g0027200 | OGI:03070590 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr03:27319219-27320142 | ||||||||
| Gene Symbol | PIDB, OsPIDb, PIDb | ||||||||||
| DNA seq | atggccgccgccgccgcgtcgCccacgtcgtcgtcttctctcccgcccaagcctcccaactccgccgccatgcttgtcgagcagcagccgctgtcctaccacgacgtggacgccgcctccacgcccagctccagcgtcagtagcagcagcacggcgagcgtcggtggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctccccGcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgcgccgctcggcccgcggacttcaccctcgtccgccgcgtcggcgccggggacatcggaccgtctacctctgccgcctcgacggaaaacgcggcgccggctcgccgtcgccgtgcgagtacgccatgaaggtggtggacccgcgcgcgctcgccaagaaggcaagctggccgcgcgccgccgcggagaagcgcgtcctgcgccgactcgaccacccttcctccccaccatgttcgccgacttcgacgccggccaggactactcctgcgtcgtcatggagttctgccccggcggcgacctccactcgctccgccaccgcgtgcccggccgccggttccccgtcgcgtccgccaggttttctacgccgccgaggtgctcctcgcgctcgagtacctgcacatgatgggcatcggtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatcatgctcaccgacttcgacctgtcgctcgagtccacggcgtcgccggcgctcgaggacgcgaggaacggcgcggacgacgacccggcgacgccgacctgctcctccggagtgcagctgttcaggctcaggaggtggaggcgccgcgccgcgccgcgccggcggcccgcggttcgtggctga
More
|
||||||||||
| CDS seq | atggccgccgccgccgcgtcgCccacgtcgtcgtcttctctcccgcccaagcctcccaactccgccgccatgcttgtcgagcagcagccgctgtcctaccacgacgtggacgccgcctccacgcccagctccagcgtcagtagcagcagcacggcgagcgtcggtggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctccccGcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgcgccgctcggcccgcggacttcaccctcgtccgccgcgtcggcgccggggacatcggaccgtctacctctgccgcctcgacggaaaacgcggcgccggctcgccgtcgccgtgcgagtacgccatgaaggtggtggacccgcgcgcgctcgccaagaaggcaagctggccgcgcgccgccgcggagaagcgcgtcctgcgccgactcgaccacccttcctccccaccatgttcgccgacttcgacgccggccaggactactcctgcgtcgtcatggagttctgccccggcggcgacctccactcgctccgccaccgcgtgcccggccgccggttccccgtcgcgtccgccaggttttctacgccgccgaggtgctcctcgcgctcgagtacctgcacatgatgggcatcggtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatcatgctcaccgacttcgacctgtcgctcgagtccacggcgtcgccggcgctcgaggacgcgaggaacggcgcggacgacgacccggcgacgccgacctgctcctccggagtgcagctgttcaggctcaggaggtggaggcgccgcgccgcgccgcgccggcggcccgcggttcgtggctga
More
|
||||||||||
| Protein seq | MAAAAASPTSSSSLPPKPPNSAAMLVEQQPLSYHDVDAASTPSSSVSSSSTASVGGRSSTFSLDSAATATPTSSPPRPHRAADVAWAPIRAAAARRSARGLHPRPPRRRRGHRTVYLCRLDGKRGAGSPSPCEYAMKVVDPRALAKKASWPRAAAEKRVLRRLDHPSSPPCSPTSTPARTTPASSWSSAPAATSTRSATACPAAGSPSRPPGFLRRRGAPRARVPAHDGHRYRDLKPENVLIRADGHIMLTDFDLSLESTASPALEDARNGADDDPATPTCSSGVQLFRLRRWRRRAAPRRRPAVRG |
||||||||||
| Function | Protein kinase PINOID [UniProtKB/Swiss-Prot:Q2QM77] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_03g0027200 | OsLiXu_03g0027200.01 | Chr03 | 27319219 | 27320142 | + | NAM | ||
| CDS seq | atggccgccgccgccgcgtcgCccacgtcgtcgtcttctctcccgcccaagcctcccaactccgccgccatgcttgtcgagcagcagccgctgtcctaccacgacgtggacgccgcctccacgcccagctccagcgtcagtagcagcagcacggcgagcgtcggtggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctccccGcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgcgccgctcggcccgcggacttcaccctcgtccgccgcgtcggcgccggggacatcggaccgtctacctctgccgcctcgacggaaaacgcggcgccggctcgccgtcgccgtgcgagtacgccatgaaggtggtggacccgcgcgcgctcgccaagaaggcaagctggccgcgcgccgccgcggagaagcgcgtcctgcgccgactcgaccacccttcctccccaccatgttcgccgacttcgacgccggccaggactactcctgcgtcgtcatggagttctgccccggcggcgacctccactcgctccgccaccgcgtgcccggccgccggttccccgtcgcgtccgccaggttttctacgccgccgaggtgctcctcgcgctcgagtacctgcacatgatgggcatcggtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatcatgctcaccgacttcgacctgtcgctcgagtccacggcgtcgccggcgctcgaggacgcgaggaacggcgcggacgacgacccggcgacgccgacctgctcctccggagtgcagctgttcaggctcaggaggtggaggcgccgcgccgcgccgcgccggcggcccgcggttcgtggctga
More
|
|||||||
| Protein seq | MAAAAASPTSSSSLPPKPPNSAAMLVEQQPLSYHDVDAASTPSSSVSSSSTASVGGRSSTFSLDSAATATPTSSPPRPHRAADVAWAPIRAAAARRSARGLHPRPPRRRRGHRTVYLCRLDGKRGAGSPSPCEYAMKVVDPRALAKKASWPRAAAEKRVLRRLDHPSSPPCSPTSTPARTTPASSWSSAPAATSTRSATACPAAGSPSRPPGFLRRRGAPRARVPAHDGHRYRDLKPENVLIRADGHIMLTDFDLSLESTASPALEDARNGADDDPATPTCSSGVQLFRLRRWRRRAAPRRRPAVRG
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_03g0642300 | RBH | 0.0 | 0.078584 | 1.175898 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os03g44020 | RBH | 0.0 | 0.046942 | 0.268843 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os03g0642300 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_03g0027730 | SBH | 0.0 | 0.0 | 0.190796 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0027470 | SBH | 0.0 | 0.323526 | 0.191962 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_03g0027540 | SBH | 0.0 | 1.341435 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_03g0027560 | SBH | 0.0 | 0.106121 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_03g0027330 | SBH | 0.0 | 0.000000 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_03G0431700 | RBH | 0.683626 | 6.631504 | 0.12009 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_03g0027100 | SBH | 0.0 | 0.267156 | 0.067034 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_03G0434000 | RBH | 1.221402 | 2.802096 | 0.22099 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_03g0027360 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_03g0027400 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_03g0027490 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0013010 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_03g0027190 | SBH | 0.0 | 4.160634 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_03G027180 | SBH | 0.0 | 1.604657 | 1.067454 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_03g0027180 | SBH | 0.0 | 6.406443 | 0.000000 |
