Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsGoSa_03g0027490 OGI:03070590 | 16/16 GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) Chr03:27662449-27664110
Gene Symbol PIDB, OsPIDb, PIDb
DNA seq

gaacgcgcaaacctccatccactacaaaacccccccaaaccaaccagccccggatccatctaacccaaccgctcgcccaccaagccacactcttccatggccgccgccgccgcgtcgcccacgtcgtcgtcttctctcccgcccaagcctcccaactccgccgccatgcttgtcgagcagcagccgctgtcctaccacgacgtggacgccgcctccacgcccagctccagcgtcagtagcagcagcacggcgagcgtcggtggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctccccgcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgccgctcggcccgcgggacttcaccctcgtccgccgcgtcggcgccggggacatcgggaccgtctacctctgccgcctcgacggaaaacgcggcgccggctcgccgtcgccgtgcgagtacgccatgaaggtggtggaccgccgcgcgctcgccaagaagggcaagctgggccgcgccgccgcggagaagcgcgtcctgcgccgactcgaccacccgttcctccccaccatgttcgccgacttcgacgccggccaggactactcctgcgtcgtcatggagttctgccccggcggcgacctccactcgctccgccaccgcgtgcccggccgccggttccccgtcgcgtccgccaggttctacgccgccgaggtgctcctcgcgctcgagtacctgcacatgatgggcatcgtgtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatcatgctcaccgacttcgacctgtcgctcgagtccacggcgtcgccggcgctcgaggacgcgaggaacggcgcggacgacgacccggcgacgccgacctgcctcccggaggtgcagctgttcaggctcaggaggtggaggcgccgcgccgcgccgcgccggcggccgcggttcgtggctgagccggtggacgcgcggtccagctcgttcgtcggcacgcacgagtacgtggcgccggaggtggcgcgcggcggtgggcacggcgccggcgtggactggtgggcgtacggcgtgttcctctacgagctgctctacggccgcacgccgttcgtcggcgccaccaacgaggccacgctccgcaacatcgtgcgccgcccgctcgagttccccccggacgccgccggcggcggctcgccgcacgacgccgcggcgcgggacctgatcgcgcggctcctggacaaggacccccggtcgcgcctcgggtcgcgccgcggcgccgcggacgtcaaatcccacgccttcttcaagggcctcaacttcgcgctgctccggtcgtcggcgccgcccgtcgtgccgccgccggcggtggcggcggcccagtgcagcaaggcggcggacgtgccgcagctgtttgatctcttctgagttctgactcctattcgatcagcgcgtcagaaggaggaTtttttttttgttgtgttaattaattcgaggcacgaattaaccagctagctggctagaatcatgttgactaattaattactccattagcactgctgtacaacactgtcaattaattaattaagtaattagtgaaattattac

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CDS seq

atggccgccgccgccgcgtcgcccacgtcgtcgtcttctctcccgcccaagcctcccaactccgccgccatgcttgtcgagcagcagccgctgtcctaccacgacgtggacgccgcctccacgcccagctccagcgtcagtagcagcagcacggcgagcgtcggtggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctccccgcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgccgctcggcccgcgggacttcaccctcgtccgccgcgtcggcgccggggacatcgggaccgtctacctctgccgcctcgacggaaaacgcggcgccggctcgccgtcgccgtgcgagtacgccatgaaggtggtggaccgccgcgcgctcgccaagaagggcaagctgggccgcgccgccgcggagaagcgcgtcctgcgccgactcgaccacccgttcctccccaccatgttcgccgacttcgacgccggccaggactactcctgcgtcgtcatggagttctgccccggcggcgacctccactcgctccgccaccgcgtgcccggccgccggttccccgtcgcgtccgccaggttctacgccgccgaggtgctcctcgcgctcgagtacctgcacatgatgggcatcgtgtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatcatgctcaccgacttcgacctgtcgctcgagtccacggcgtcgccggcgctcgaggacgcgaggaacggcgcggacgacgacccggcgacgccgacctgcctcccggaggtgcagctgttcaggctcaggaggtggaggcgccgcgccgcgccgcgccggcggccgcggttcgtggctgagccggtggacgcgcggtccagctcgttcgtcggcacgcacgagtacgtggcgccggaggtggcgcgcggcggtgggcacggcgccggcgtggactggtgggcgtacggcgtgttcctctacgagctgctctacggccgcacgccgttcgtcggcgccaccaacgaggccacgctccgcaacatcgtgcgccgcccgctcgagttccccccggacgccgccggcggcggctcgccgcacgacgccgcggcgcgggacctgatcgcgcggctcctggacaaggacccccggtcgcgcctcgggtcgcgccgcggcgccgcggacgtcaaatcccacgccttcttcaagggcctcaacttcgcgctgctccggtcgtcggcgccgcccgtcgtgccgccgccggcggtggcggcggcccagtgcagcaaggcggcggacgtgccgcagctgtttgatctcttctga

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Protein seq

MAAAAASPTSSSSLPPKPPNSAAMLVEQQPLSYHDVDAASTPSSSVSSSSTASVGGRSSTFSLDSAATATPTSSPPRPHRAADVAWAPIRAAAAPLGPRDFTLVRRVGAGDIGTVYLCRLDGKRGAGSPSPCEYAMKVVDRRALAKKGKLGRAAAEKRVLRRLDHPFLPTMFADFDAGQDYSCVVMEFCPGGDLHSLRHRVPGRRFPVASARFYAAEVLLALEYLHMMGIVYRDLKPENVLIRADGHIMLTDFDLSLESTASPALEDARNGADDDPATPTCLPEVQLFRLRRWRRRAAPRRRPRFVAEPVDARSSSFVGTHEYVAPEVARGGGHGAGVDWWAYGVFLYELLYGRTPFVGATNEATLRNIVRRPLEFPPDAAGGGSPHDAAARDLIARLLDKDPRSRLGSRRGAADVKSHAFFKGLNFALLRSSAPPVVPPPAVAAAQCSKAADVPQLFDLF

Function Protein kinase PINOID [UniProtKB/Swiss-Prot:Q2QM77]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsGoSa_03g0027490 OsGoSa_03g0027490.01 Chr03 27662449 27664110 + NAM
CDS seq

atggccgccgccgccgcgtcgcccacgtcgtcgtcttctctcccgcccaagcctcccaactccgccgccatgcttgtcgagcagcagccgctgtcctaccacgacgtggacgccgcctccacgcccagctccagcgtcagtagcagcagcacggcgagcgtcggtggccgctcctccacgttctcgctcgactcggccgccaccgccacgcccacctcctccccgcctcgcccgcaccgcgcggccgacgtcgcctgggcgcccatccgcgccgccgccgcgccgctcggcccgcgggacttcaccctcgtccgccgcgtcggcgccggggacatcgggaccgtctacctctgccgcctcgacggaaaacgcggcgccggctcgccgtcgccgtgcgagtacgccatgaaggtggtggaccgccgcgcgctcgccaagaagggcaagctgggccgcgccgccgcggagaagcgcgtcctgcgccgactcgaccacccgttcctccccaccatgttcgccgacttcgacgccggccaggactactcctgcgtcgtcatggagttctgccccggcggcgacctccactcgctccgccaccgcgtgcccggccgccggttccccgtcgcgtccgccaggttctacgccgccgaggtgctcctcgcgctcgagtacctgcacatgatgggcatcgtgtaccgcgacctcaagccggagaacgtgctcatacgcgccgacggccacatcatgctcaccgacttcgacctgtcgctcgagtccacggcgtcgccggcgctcgaggacgcgaggaacggcgcggacgacgacccggcgacgccgacctgcctcccggaggtgcagctgttcaggctcaggaggtggaggcgccgcgccgcgccgcgccggcggccgcggttcgtggctgagccggtggacgcgcggtccagctcgttcgtcggcacgcacgagtacgtggcgccggaggtggcgcgcggcggtgggcacggcgccggcgtggactggtgggcgtacggcgtgttcctctacgagctgctctacggccgcacgccgttcgtcggcgccaccaacgaggccacgctccgcaacatcgtgcgccgcccgctcgagttccccccggacgccgccggcggcggctcgccgcacgacgccgcggcgcgggacctgatcgcgcggctcctggacaaggacccccggtcgcgcctcgggtcgcgccgcggcgccgcggacgtcaaatcccacgccttcttcaagggcctcaacttcgcgctgctccggtcgtcggcgccgcccgtcgtgccgccgccggcggtggcggcggcccagtgcagcaaggcggcggacgtgccgcagctgtttgatctcttctga

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Protein seq

MAAAAASPTSSSSLPPKPPNSAAMLVEQQPLSYHDVDAASTPSSSVSSSSTASVGGRSSTFSLDSAATATPTSSPPRPHRAADVAWAPIRAAAAPLGPRDFTLVRRVGAGDIGTVYLCRLDGKRGAGSPSPCEYAMKVVDRRALAKKGKLGRAAAEKRVLRRLDHPFLPTMFADFDAGQDYSCVVMEFCPGGDLHSLRHRVPGRRFPVASARFYAAEVLLALEYLHMMGIVYRDLKPENVLIRADGHIMLTDFDLSLESTASPALEDARNGADDDPATPTCLPEVQLFRLRRWRRRAAPRRRPRFVAEPVDARSSSFVGTHEYVAPEVARGGGHGAGVDWWAYGVFLYELLYGRTPFVGATNEATLRNIVRRPLEFPPDAAGGGSPHDAAARDLIARLLDKDPRSRLGSRRGAADVKSHAFFKGLNFALLRSSAPPVVPPPAVAAAQCSKAADVPQLFDLF

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0642300 RBH 0.0 0.078584 1.175898
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g44020 RBH 0.0 0.046942 0.268843
Nipponbare | IRGSP 1.0 | RAP-db Os03g0642300 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0027730 RBH 0.0 0.0 0.190796
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0027470 RBH 0.0 0.323526 0.191962
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0027540 RBH 0.0 1.341435 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0027560 RBH 0.0 0.106121 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0027330 RBH 0.0 0.000000 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0431700 RBH 0.683626 6.631504 0.12009
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0027100 RBH 0.0 0.267156 0.067034
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0434000 RBH 1.221402 2.802096 0.22099
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0027360 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0027400 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_12g0020430 RBH 0.0 5.410662 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0013010 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0027190 RBH 0.0 4.160634 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G027180 RBH 0.0 1.604657 1.067454
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0027180 RBH 0.0 6.406443 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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