Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_03g0026220 OGI:03068320 | 16/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr03:26213404-26220033
Gene Symbol -
DNA seq

accgctatagaatctgaagtccccggagtacctctgcccatcacctttccacttttctcctcctgaTtccttcctacccatcctgattCctgatatccaaatgggcatgctgAaaataggcaagaactgcagtgtttgcaaggagtggcaagaacactgctactGgagccatatggccgatgactgtaagcacttcttgacgtatatggttggggacttcaccgagagcatggtgagaaaatcaatcatctcaggcttccatttATATGTTCTTTTCTCATGTTCTTTCTCATTTTTTTTCTGTACACAATAAAAGGCGCCTAAGTGCAAATAAATCTCACTCCATAAGATTTCTTTTTCATGTATTCCCATGGTCTATATATTGATATCACTGAATAGATTGACTGACCTGTCATTTCTGCAGATCGTGCCTAGTAGATTTGCCAACAATTTCAACGGGCACATTTCAGAGGTCGTGAATCTGAAGTCACCTAGCGGCAAAACATGGAGCATTGGAGTAGCCAACAGTGACACCGGTGAACTAGTTCTTCGGTCAGGCTGGAAAGAGTTCGTGGATGCTAATGGCGTCCAGGAAAATGACTGCCTGCTCTTCAGGTACAGTGGCGTCTCCTCCTTCGATGTGCTCATCTTTGATCCGTCCGGCTGCGAGAAGGCGACGCCGCATTTCGTCGAGAACCGTGGATTTGGGAGAGAAGAGAAGTCTGCAGGAGCTGAAGGAGGAGGCAGAGATGGTGACAAGAATGGCCATCACCAACACCAGCTGGAGATGACACCCCACAAGAACAGCAGCAGGTGCAGGAGCATCCCCAGTGCATGTAAGCGCGGATTATTCAGTGATGAtgagataggtatgtatgtcacacaacacaacactgtgtaattTAttttttctttgataattgaaatcaatatatccagcccctgcatcatcgaaatgaaatgggtatgtcgcacagcactctaataaattTAttttcttggataatgCTctgtctGttttatattgtacgacgctttgatttttttttccagatcAaacttacttgttgaagttcagctaaatttattagaaagtttagcaacatcttcatcaccaaattagttttattaaatataTtttttctaaaaacttgatatgatcaaagcatcttataatatgaacggataGggtagaaatcaatccagactctgcatcattgacatgtatgcggccatgggcattattgttgtaacaactaatattggtacatacatgcatgaacgtgcttgccttgcagagcaagatcatcgcgaagagaagaaggAaggggacgatgaagacgaagacaaagatggagaggacaggtactacttctgcaggcacggcgggcgagtgaccgagtacaacctgagcaagggagacaaggaggagatctcgcgcgtccccgtgccggtggagcctggcaaCccggtgttggtgaaggtcatccacgccagccacctcctctccagccgctacagcacagtagtaagtgtgaggcatttctcgtcacatttttcagtgagattaatttcatggctgaaatataatggtgcatttcttttggtcagggcgtgtcgccggagttcgccggcaggtacctggggccggccatggcgagggaggtggtgatggagaggggaggaggaggaggaggaggggatcagtggcacgtccggttcgtgcgccgggagagcagccgcggcttccacggcaccgggtggcgtcggttcgcccgtgacaatggcctcctcgcccacgacgtctgcctcttcgagctcaggttggtggacggcgccggcgccggcgaccgcctgcgccgccggccgaggccgacgatggccgtgcacgtcctccggcgggtgcgcggccgcttcgtgctgattcgctgaccaaccatccatgtgcagctcaaactggtgaactgatctgagcccaacctggtcgcctctctgcttgctagctcttgcttgctgctggtcctggtgacaaccagtgcatctgtaatatctggtcatgctgtgtctaattcgtagtaccaagttgtgttaaattcggtgctacgttacaataattttaggatgaaGgaagtatgcacgtacgtacctggtgatgatcaagctttctggtctgattaatgtggacctctggtctgattatgtggtcagtggtctcGgggaacattaggcactctttgtttaggcttataagccaacttataagtcgaaaagtctaagctaaaataaacaagcagctttttcatttggcttttttaagccataagtcactctaacactattaagccaaaagctaggttggagaagcttttttttggcttatatgagatagatgtatgactctaccattaaacttaggacattaaatccactgcttataaatcatataagccaataagctgacttaaaagtctaggccaataagcctaagcctaaataaagagggccttagtatggaagttgttctccttatcttacttcataccaaaccagtttaaggtgcaaaacacaagattcatggttagcctagaacggacccatcgttttgcttattcgcggaataagtcaaacggcatatttgcaaataaatattaatttgtgaataaaacttttatatacatgttctgagcgatctaaaagcaaatgctgaaaaataaacttcgataaaaaaaacctcaaaatcagctccaaatttaagattcaaaatttaaattttggctaatAagcataagcataagcgaaaagataagacccttatttacaagttaattaatttgtaggtctataccagagccaactagactagtacactattacggagtaGggttgtcaacgagccgagctcaactagctcacgagcctcaagttttttttgggagccctacataggaggcgacccagctctatccaccaccgcctctcccctacctccttccccgccttaccgttgccggtgcgagttgcccaggaatcatggcaacaagccaggatgatcgtggtggggcaactgtttcgttcgccttcctgaacaccgaacggagagaaggatagtgatccagtgctcccttggccggatctagaggccaccggctaaagtggaggaggatggagaagcagaacagcggggcaaccttcgaggaggcgaggtcatgctacgtagggtggctaacctcgatagaattggggtgcggctggtgatggatacgttggcgtggccggcaggctagatcggcggaagatgctacgatcgacgaggctgaggatagtggtgccagaggctactgaggagatgggagtaagcaccccaggggcagctcatcctctttcctcatactttgctaccatgacaagaggtggagcctgacgacggttgcgaggttggaaggaatgatgaaggcggtcactgggtatgatggctgtcgatttttaggatcagcaatataatttctagggtgcacaacatcaaggagggatggtgacacaatcgtttatactggttcaggccctcaatgcgaggtaatacctagtccagttgtttgtggattgaatttgtgttggttgtgaatggtagaatacgtaggagtatggcgctagtcaaagtaataaagataatactccctcaatcaaaatataactacttctagttacAaatatagctgtattttaaaatagaggaaatacgaatttacaagagaagagaagagataatttcaaaggggtgagtgcatgcgcattgtgggtgtccgcatttgtattgtgtttctagAaaagagaagagttaaattattttaggatataaaataatcaataatgtagcttagagaaagagtgaattgttaatctagtctagcgagtaggaatgaagcttatctgactttattcaatttacagatttatcacattatcatcgcgtcaactatatattatatAaagtttggtttttcagtatgaggccgtctataatctaataatcccaagattcataaaagtagatttgacgtaactacatatcagttgagccgctgatatgtatatcctacttttcgccgggcatatttatatcctactttcctattgctgtcatatgtgtcacggctgaaatacacagcagctaagttaccgacacgttctcatcggaactatcgctgcagaacctcctgaagtccccggagtacctcttcccgtaacatttttccctttctcctatgagacctctgcctagtttctagatttcttcgtatccgtcctgatatccaaatgggcatgctgaaaataggcaagaactgcagcgtttgcaaggagtggcaagaacactgctactggagccatatggccgaccacagtaagcacttcttgaagcatatggttggggatttcaccgagagcatggtgagaaatcttctcacttacattttagatatatgatttttctcctcttttctgaaagtatctgaagctgggggcacatgagtcagtttgaataactaaaagggatgaaccatcaactgaatattcattcccctgaaaaaaatttgcaagctccatgcgagagtaagattttgcatttagccttctatggtgtacaggtactcaagccttttccagcctttttgaggggccatcaggccatgagaccatataaggctaaatgcaaaatcttaCTctctctctctctctctctctaagattatattttgcatgtctttccatggtaaactcaagcgctttttgtttttgaagtaaagtaaattcaagcacgaatctctctattcatatcactgtgtacctcagaaagaactgaagtatgaaaaaaaaaaaacctgaatcagtcaacctgctattgctgcagaccgtgcctgctagatttgcaaacaatttcaacgggcacatctcagaggaagtgaatctgagatctcctagcagcgaaacctggagcattggagtagccaacagcgacgccggtgaactagttcttcagcctggctggaaagagttcgtggatggcaacggcatcgaggaaggagactgcctgctcgtcaggtacagcggcgtctcctcctccttcgatgtgctcatctttgatccgtccggctgcgagaaggcgtcgccgcatttcgtcgggagccatggattcgggagagcggagaactccgccggagctgaacaaggaggcagaaacggccgccgcacgccgccgatcgtcgacggcgataatggccatcgccaccacctggagatgacgctccacaggaacagctgcaggagcatccccagagcatgcaaacgcagcttattcagtgatgaaacaggtatgacaacacaacatcaacactataataaactatagttcttgtttttttttcttcctgtaatgataactcaatccagcctgtgcatcgagatgtataaggccctgtttggtgagcttaagatgagaatccgctgtttggaagtcagcttctaagaatttggagaagctgggttttctagcttctggttctagtttattttctggattttacaactacgtattaggagaatctgggtaacaatgtggtagaatatgcagcagctaaaagctcccaaatcggcattgtaacttatatgcgtgtctgccacctgcagaagcgaaagaaaacgatggcgaagatgaagatgaagatgttgtcgcggccgcggaaggcgggcgctacggggagtactacttcagcaggcacggacgggtggccgagtacaacctgaggaaggaagacagggaggagatctcgcgcgtccccgtgccggttcagcccgggaacccggtgttcgtgcaggtcatccacagcagccacgtccgtagcagcaagtactgcattgtagtaagtgactcaccttcatcaaggttaaatctctggctatagctgccgctcgtgtctcctcctgcacacactgcacataccaaatggcattgcattgcaacattgcagtttcatttcttggctgaaatagggaaaatttAaattggtgctgcttttgttttgatgtcagggggtgtcgccggagttcgcgggtaagtatctgggggcggtggagagggaggtggtgctggagagggcgagcaggggaggggagtggcacgtcctgttcgtgcaccggcagaacacccgcggcttctacggcgccggctggcgtcagttcgccggcgacaatcgtctcgtcgcccacgacgtctgcctcttcgagctcacgatggtggacgccgcggccggcggcggcggaaaccgccggcgacgctggagccggcggccgacgatgaccgtgcatgtcctccgtcgggtgcgtggtcgcttcgtgcttctgcgctgacctcctcgggctacctgccgtatgtgtttggactttggactcgggagcagcacaactgaactgatgaactgaaccagctataacctggtggcctctgcttttgctcttgctggacctggtggcaaacagtgtatctatactggtatgtaattatgtatgtacgtatgtacctggttatatctatactagtatgtagtatatgtatgtacctggtgatggtcaagcttg

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CDS seq

atgggcatgctgAaaataggcaagaactgcagtgtttgcaaggagtggcaagaacactgctactGgagccatatggccgatgactgtaagcacttcttgacgtatatggttggggacttcaccgagagcatgATCGTGCCTAGTAGATTTGCCAACAATTTCAACGGGCACATTTCAGAGGTCGTGAATCTGAAGTCACCTAGCGGCAAAACATGGAGCATTGGAGTAGCCAACAGTGACACCGGTGAACTAGTTCTTCGGTCAGGCTGGAAAGAGTTCGTGGATGCTAATGGCGTCCAGGAAAATGACTGCCTGCTCTTCAGGTACAGTGGCGTCTCCTCCTTCGATGTGCTCATCTTTGATCCGTCCGGCTGCGAGAAGGCGACGCCGCATTTCGTCGAGAACCGTGGATTTGGGAGAGAAGAGAAGTCTGCAGGAGCTGAAGGAGGAGGCAGAGATGGTGACAAGAATGGCCATCACCAACACCAGCTGGAGATGACACCCCACAAGAACAGCAGCAGGTGCAGGAGCATCCCCAGTGCATGTAAGCGCGGATTATTCAGTGATGAtgagatagagcaagatcatcgcgaagagaagaaggAaggggacgatgaagacgaagacaaagatggagaggacaggtactacttctgcaggcacggcgggcgagtgaccgagtacaacctgagcaagggagacaaggaggagatctcgcgcgtccccgtgccggtggagcctggcaaCccggtgttggtgaaggtcatccacgccagccacctcctctccagccgctacagcacagtaggcgtgtcgccggagttcgccggcaggtacctggggccggccatggcgagggaggtggtgatggagaggggaggaggaggaggaggaggggatcagtggcacgtccggttcgtgcgccgggagagcagccgcggcttccacggcaccgggtggcgtcggttcgcccgtgacaatggcctcctcgcccacgacgtctgcctcttcgagctcaggttggtggacggcgccggcgccggcgaccgcctgcgccgccggccgaggccgacgatggccgtgcacgtcctccggcgggtgcgcggccgcttcaactgcagcgtttgcaaggagtggcaagaacactgctactggagccatatggccgaccacagtaagcacttcttgaagcatatggttggggatttcaccgagagcatgaccgtgcctgctagatttgcaaacaatttcaacgggcacatctcagaggaagtgaatctgagatctcctagcagcgaaacctggagcattggagtagccaacagcgacgccggtgaactagttcttcagcctggctggaaagagttcgtggatggcaacggcatcgaggaaggagactgcctgctcgtcaggtacagcggcgtctcctcctccttcgatgtgctcatctttgatccgtccggctgcgagaaggcgtcgccgcatttcgtcgggagccatggattcgggagagcggagaactccgccggagctgaacaaggaggcagaaacggccgccgcacgccgccgatcgtcgacggcgataatggccatcgccaccacctggagatgacgctccacaggaacagctgcaggagcatccccagagcatgcaaacgcagcttattcagtgatgaaacaggcgggcgctacggggagtactacttcagcaggcacggacgggtggccgagtacaacctgaggaaggaagacagggaggagatctcgcgcgtccccgtgccggttcagcccgggaacccggtgttcgtgcaggtcatccacagcagccacgtccgtagcagcaagtactgcattgtaggggtgtcgccggagttcgcgggtaagtatctgggggcggtggagagggaggtggtgctggagagggcgagcaggggaggggagtggcacgtcctgttcgtgcaccggcagaacacccgcggcttctacggcgccggctggcgtcagttcgccggcgacaatcgtctcgtcgcccacgacgtctgcctcttcgagctcacgatggtggacgccgcggccggcggcggcggaaaccgccggcgacgctggagccggcggccgacgatgaccgtgcatgtcctccgtcgggtgcgtggtcgcttcgtgcttctgcgctga

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Protein seq

MGMLKIGKNCSVCKEWQEHCYWSHMADDCKHFLTYMVGDFTESMIVPSRFANNFNGHISEVVNLKSPSGKTWSIGVANSDTGELVLRSGWKEFVDANGVQENDCLLFRYSGVSSFDVLIFDPSGCEKATPHFVENRGFGREEKSAGAEGGGRDGDKNGHHQHQLEMTPHKNSSRCRSIPSACKRGLFSDDEIEQDHREEKKEGDDEDEDKDGEDRYYFCRHGGRVTEYNLSKGDKEEISRVPVPVEPGNPVLVKVIHASHLLSSRYSTVGVSPEFAGRYLGPAMAREVVMERGGGGGGGDQWHVRFVRRESSRGFHGTGWRRFARDNGLLAHDVCLFELRLVDGAGAGDRLRRRPRPTMAVHVLRRVRGRFNCSVCKEWQEHCYWSHMADHSKHFLKHMVGDFTESMTVPARFANNFNGHISEEVNLRSPSSETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCLLVRYSGVSSSFDVLIFDPSGCEKASPHFVGSHGFGRAENSAGAEQGGRNGRRTPPIVDGDNGHRHHLEMTLHRNSCRSIPRACKRSLFSDETGGRYGEYYFSRHGRVAEYNLRKEDREEISRVPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLERASRGGEWHVLFVHRQNTRGFYGAGWRQFAGDNRLVAHDVCLFELTMVDAAAGGGGNRRRRWSRRPTMTVHVLRRVRGRFVLLR

Function B3 domain-containing protein Os03g0622100 [UniProtKB/Swiss-Prot:Q10GM4]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_03g0026220 OsLiXu_03g0026220.01 Chr03 26213404 26220033 + NAM
CDS seq

atgggcatgctgAaaataggcaagaactgcagtgtttgcaaggagtggcaagaacactgctactGgagccatatggccgatgactgtaagcacttcttgacgtatatggttggggacttcaccgagagcatgATCGTGCCTAGTAGATTTGCCAACAATTTCAACGGGCACATTTCAGAGGTCGTGAATCTGAAGTCACCTAGCGGCAAAACATGGAGCATTGGAGTAGCCAACAGTGACACCGGTGAACTAGTTCTTCGGTCAGGCTGGAAAGAGTTCGTGGATGCTAATGGCGTCCAGGAAAATGACTGCCTGCTCTTCAGGTACAGTGGCGTCTCCTCCTTCGATGTGCTCATCTTTGATCCGTCCGGCTGCGAGAAGGCGACGCCGCATTTCGTCGAGAACCGTGGATTTGGGAGAGAAGAGAAGTCTGCAGGAGCTGAAGGAGGAGGCAGAGATGGTGACAAGAATGGCCATCACCAACACCAGCTGGAGATGACACCCCACAAGAACAGCAGCAGGTGCAGGAGCATCCCCAGTGCATGTAAGCGCGGATTATTCAGTGATGAtgagatagagcaagatcatcgcgaagagaagaaggAaggggacgatgaagacgaagacaaagatggagaggacaggtactacttctgcaggcacggcgggcgagtgaccgagtacaacctgagcaagggagacaaggaggagatctcgcgcgtccccgtgccggtggagcctggcaaCccggtgttggtgaaggtcatccacgccagccacctcctctccagccgctacagcacagtaggcgtgtcgccggagttcgccggcaggtacctggggccggccatggcgagggaggtggtgatggagaggggaggaggaggaggaggaggggatcagtggcacgtccggttcgtgcgccgggagagcagccgcggcttccacggcaccgggtggcgtcggttcgcccgtgacaatggcctcctcgcccacgacgtctgcctcttcgagctcaggttggtggacggcgccggcgccggcgaccgcctgcgccgccggccgaggccgacgatggccgtgcacgtcctccggcgggtgcgcggccgcttcaactgcagcgtttgcaaggagtggcaagaacactgctactggagccatatggccgaccacagtaagcacttcttgaagcatatggttggggatttcaccgagagcatgaccgtgcctgctagatttgcaaacaatttcaacgggcacatctcagaggaagtgaatctgagatctcctagcagcgaaacctggagcattggagtagccaacagcgacgccggtgaactagttcttcagcctggctggaaagagttcgtggatggcaacggcatcgaggaaggagactgcctgctcgtcaggtacagcggcgtctcctcctccttcgatgtgctcatctttgatccgtccggctgcgagaaggcgtcgccgcatttcgtcgggagccatggattcgggagagcggagaactccgccggagctgaacaaggaggcagaaacggccgccgcacgccgccgatcgtcgacggcgataatggccatcgccaccacctggagatgacgctccacaggaacagctgcaggagcatccccagagcatgcaaacgcagcttattcagtgatgaaacaggcgggcgctacggggagtactacttcagcaggcacggacgggtggccgagtacaacctgaggaaggaagacagggaggagatctcgcgcgtccccgtgccggttcagcccgggaacccggtgttcgtgcaggtcatccacagcagccacgtccgtagcagcaagtactgcattgtaggggtgtcgccggagttcgcgggtaagtatctgggggcggtggagagggaggtggtgctggagagggcgagcaggggaggggagtggcacgtcctgttcgtgcaccggcagaacacccgcggcttctacggcgccggctggcgtcagttcgccggcgacaatcgtctcgtcgcccacgacgtctgcctcttcgagctcacgatggtggacgccgcggccggcggcggcggaaaccgccggcgacgctggagccggcggccgacgatgaccgtgcatgtcctccgtcgggtgcgtggtcgcttcgtgcttctgcgctga

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Protein seq

MGMLKIGKNCSVCKEWQEHCYWSHMADDCKHFLTYMVGDFTESMIVPSRFANNFNGHISEVVNLKSPSGKTWSIGVANSDTGELVLRSGWKEFVDANGVQENDCLLFRYSGVSSFDVLIFDPSGCEKATPHFVENRGFGREEKSAGAEGGGRDGDKNGHHQHQLEMTPHKNSSRCRSIPSACKRGLFSDDEIEQDHREEKKEGDDEDEDKDGEDRYYFCRHGGRVTEYNLSKGDKEEISRVPVPVEPGNPVLVKVIHASHLLSSRYSTVGVSPEFAGRYLGPAMAREVVMERGGGGGGGDQWHVRFVRRESSRGFHGTGWRRFARDNGLLAHDVCLFELRLVDGAGAGDRLRRRPRPTMAVHVLRRVRGRFNCSVCKEWQEHCYWSHMADHSKHFLKHMVGDFTESMTVPARFANNFNGHISEEVNLRSPSSETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCLLVRYSGVSSSFDVLIFDPSGCEKASPHFVGSHGFGRAENSAGAEQGGRNGRRTPPIVDGDNGHRHHLEMTLHRNSCRSIPRACKRSLFSDETGGRYGEYYFSRHGRVAEYNLRKEDREEISRVPVPVQPGNPVFVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLERASRGGEWHVLFVHRQNTRGFYGAGWRQFAGDNRLVAHDVCLFELTMVDAAAGGGGNRRRRWSRRPTMTVHVLRRVRGRFVLLR

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.000000 0.000000 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0622100 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g42420 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os03g0622200 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0026700 RBH 0.0 0.0 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0026430 RBH 0.0 0.299294 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0026490 RBH 0.000000 0.0 0.164040
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0026510 RBH 0.000000 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0026310 RBH 0.000000 0.000000 0.000000
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0416900 RBH 0.1102895 0.203004 0.5228245
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0026090 RBH 0.0 0.000000 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0420300 RBH 0.152193 0.0114235 2.4075465
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0026350 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0026370 RBH 0.0 0.000000 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0026470 RBH 0.000000 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_03g0026140 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G026170 RBH 0.000000 0.000000 0.000000
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0026120 RBH 0.0 0.0 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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