Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0017250 | OGI:02048470 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:17724272-17740601 | ||||||||
| Gene Symbol | OsXrn4-L, Xrn4-L | ||||||||||
| DNA seq | aggaagctagctagcccgaagttatcatcaaactgatatctcctcatccgatcctcttcttgcttcacctgctgccctctgctccggtcgatcgcttgcatattgcatatttgcatgcagagctgccatgggaataccttctttctacaggtggctcgtgaacagatacccaagcatcgtctccccggcaaagggagccgccctgcagatggcatcgtcgtctacgacaacctctacctcgacatgaatcaaatcatccattattccttccacccgcaggaccagatgaacgccggcacagatgtatgtatagcttaattagttagctactgcaaatttctaattaatctgcatatgaatctggccggtattgatatgagccacttggtcaggtgtgcgctccgacgacggtcagcgaggttttcgagtccatgttcgactacctggaccgcttgtttcgcatcgtcaggccgagaaggctccttacttggcagtgggttcgtcgtatatatacagcagatggatcgttggatcgattctctcgtcaaattacttagtaccatattgtcgtttcaagaattaatcatggatttgtttttgttggttggcttggcttcaattatttctgcagtttgtgtacttcttttattattctctcactgcacgctctcttttttttaaaaaaattggtttaattccatgtgcagatggggttgctccgtgcgccaaaatgaacggaatgcgaagaggacgacgttcgcttgggtagccagagtcagtcctttgcatttatttattttcttgcatgtcgatcagctagctagctgctgaagcaattgatcgatcgagaaaaaggcatccatgctttggttcaattttacaggcgagtgaagaggaggaatgcagaagatatcagaaggggtctctgaccccaatgtcatcacgccagggactgaattcatggagaagatatcgcaagcgctcacgtactacatccgtgccagattgaatagcagtgatccagggtggaaacacatcatggttaattaattttctcttgcacttcttcagtataaatgtacctcgtattcttcttaatttcccgTttttgttatccaaggagagtccatgcatgttcactcaatttcaacggtttcgcatttagatggCcataaggcctgcccggcacggcccggcccactagccatcgggccggcacggcccggttggcacttcgtgccgggccatgctggcccatgggctgcacctCCcgcccaggcacagcccaccagcagtcgggccgtgctgtgccggctcaaaggcacgggcggcccatcgtgtcttttttAaaataagtctattttctctctcttctctttgggctgttaCatatatatAtatagctaaaataagtctattttacatccctattctttcgaccatggcatataatatgtttttactccctattctttgtgtgtcgggCctggctgctggcccatcttgccgggccggcccaatgtgccggtggggggggggggggagggggaggcacggcctggcggtcagggccgtcgggccaggccatgccgtgcttgggccgggccaaaatgccatgccgtgggctgggccgtcggaccttatgaccatctatattctatagtttcgcatataattgctgggagtttaatgggcctctatcctcccttgctctaggagttttcatcgtttttttccttgtcctggaaatggcactttagccaatttgcgttgtttaactaaaactttgctttcttcaaatatattgatgtgcaattatttctgtgtgttcgcgaaaaaaagatgtatgtagtcgcaagatctacatgtatagtattgacaaattaactgttaatttacatgcatgcttttggttaccacaaagtacgatcttattatgctttccaatttgatgcaatacgtctattccgaaggtaatactctctgatgcaaatgttcctggagaaggagagcacaagatcatgtctttcatccgtgcacagcgcagcatggaaggctatgaccccaacacacgacattgcttgtttgggcatgtagggaaattaatataaatccgttttatgataatctcattatttcaaattaatcctagctctatagctcagattcagttcacccctgcctattatttttgtaatggaagctaactgtgaacggtttattgcaggatgcggatttgatcatgcttgctttggcatctcacgaagtccacttctctattttgcgtgaggtctgatgatctcttgttaacgttaaattcgtacttaaatagataaagtgaagtattaagcatgtgaccttatttttatatcatcatgtaacctactccctcgttccaaaagactgttattttaaatgtcaaaggcatatcaagaaagagaccaaaagactaccatgtcctccattaacgcagagagaaaatgagaaggagctagaagggagtactattagttggatggccaaactaagaaaaagttaagtggtatcaaaaggtctagggactcacagcttaaataaaaactcttttagataaatcctaaaactaaaattatgttttttaaggacgtacgaattggagtaagtatgtaaagtcttaacagtcgaagtaactagtcagcatttataatggtgcagttaataatactcttatgttaacttcaacaggataattcccagctaacagaagcggatccagagaaacaatatctgtcgtcctcaatcccagcccagataataatgccagtaattaatcgtttggttatgtgaataacaccatcttctttcagtttttgaacatatgggttctgagagagtacttggagattgaattaaagatactggacccagtttgtgagcctgatattgagaggctgattgatgacttcatcttcatttgtttcttgatgggaaacgatttcatccccacattccgtcgcttgagatgaaggaggtatgtgtttagagtatactccactatggattaggttcgtataatccgttattacttcagatagataggattagtttccatatatctctaggcttacttgagatctcagtcttgtactcctatatatatatatacatacatatatatatatatacatacatatatatatatatacatacataatatatatatacatatatatatacatatatatatatatatatatatatatatatatatatataatatacacatatatacatatatagatatatatatacatatatacatatatacacatatatacacatatacacatatataccatatacatatataccacatatacatatatacacatatactatatacatcatatatacatatatacatatacatacatatatatatacatatatatatatatatatataggatacccatatgggactacatggtgcccgggctacaaggtataaaacacaaattctctcaaatttaaaattttttcaaattgtgagtatatacctagctatatgaatttgattcatacaaatacctaacaacaaaacaactcaaactaaactttattttacaatcattattagatacctaacgaattatgtttggatgttatatacctagaaccaaaatctaacaaaaaaaagttcaaacttgttttgaaactaacatagtaaagaagttaatgttcatatctaaacattttaaaaaaTttcatactcattcaaattgggtatatactcaatttgaatcttggagcccatactccatgtagcaccagttaatttatatatatatatatatatATATAGaCacacacaccgcaccgtaaaactcaaaacaataagtctaatatttacagtatatctctctccctatactatttaacaatgtgcatgtgtacgccttaaacaaaagctcaagagaaagttaatctgttattagtatttatataaatcctttcacttaatttgttcatcaccgtgaaaacttacagctgtttattaatttcatctattccatgtaacagtatgcacttgatcttctcatcgaggtatacaagacaaccttcaacaaaatgggagggtatattgtcaacatagaaaaggtacctgacggattctatgaccgttaattatttttattaatgaaagattatcctttagattatgcccgtgatgcagttacgacactgctactgaaaacaggtaaaagataaacatgctgcatatctggaagtctcaaggttggatattttcatcaactgtccatgtatgaagagaaatttttctaaaacgatacgaactggaacaggtatgttttgcattctagtatagtatatactgtcatgcaaatggaacttattgtcattattgtcgatcgtttaatttggcctttaggaatccctgaagaagtcatgtcgcgatgtgttgcgtgaagcttcagaaagtgaaagattagagctgagccgaaaactagaggacctctttttaatgaagaacgtccatatgacaaagttagtgatatccagtttgataatatttctcatgcagtcccattacaatttttgacatatcgactactgaactactgcagctaagacttggattgccaggatggaagtcccggttctacagggaatatttcggtgtcgaaacttctaatgaaattggaaatcttcaaaacgacatggttatgttttccctttgtttatttacttatcctaatgaatccctttttccctttccttccccttccctccgtccaacaaagattgtcgttctactttatttagtaaaagttaaggttcaaaatgaaaatactattcgtgatgagtactccatccgtctcAaaaaaaagataaactctagcTAtatatttggacatgcatcgtccagatacatagccagagtttgcttttttttttttggacggagggagtaattgggagtgggacgatgcctaggggtagtatgtgaagaaatttaaatgggagttgattgataagatgggcaatatattctagtgtgacaatctttagagaaaatcttttcaaacgaagatagcattgcctattacttcctctatccataatataagggattatattttatttcttgcgaaaactaaagaagtagcaaaaggacaagtcaagctacaaaatgtagtatttgggggaataaactactagaaaaattggatataattttgaattaaatatatgatcgattgttagggctttatccaatatccaggataactaatactacattatattgaaatgtactcaattttaaaaatatcaaacatgcattttcgaaataaaaaaaatatggttgtcaaatttcacaccacattaacactacgcgggcataatccttcttggtttttcctttttttttttgaccgaatgaagcatcatccttatcattataatctccccctcctcttttctttctccctttgaatttaggctcagaagtatttagaaggactttgttggatgcttcaatactatcttgcggacgtaccatcatggagctggtaagaataataaaatgttgacatatactgaataacactggatcctatttaactaattaattctcatacataaatgcttcgactctgcatcttatggtacaaacttaattgctgcaggtactacccattctatgttgctcctttcgtatctgacctcaaaagtcattgtcggttcgagatatctttcaccgtagacaaaccactgcgaccatttgatcagctcatggcagttttaccactacgaaggcatgcactttcaccattcttactgcagtactcactaACacaatacccatttttccgggcagttgggttgattatcccgtacggtcacccggcccgcctgcagctcctcatctgaaaaaatcattattttcgcgtgcGggcgggccgaccgcacggaataatcgattatcccatgcggtcgggttatatggactgcatgggataatcgattatcccgtgcgatgcaataagaccgaccgcacgggataataggttatcccccacagctagcatgtgctagggcgactgcacgggataattcgtgccgtcgccctagcacatgctagccgtctgggataacctattatcccgtgcggtcggtataatttgaccgcacgggagaatagatgcgaaaattgaccgagctcagttacaaacatcaaattaaataaaattacatagaatatatagtgtttgtatattacaagtatcccccacgacaaataaaccttttagtccactacatgttccctctcccacttccataggttcctgaatgtggggtccgtagcaagttcgctatgaggatcgtggaactctcctagatggttactgatgtcgcgacgaatgaaccggcacaagtccgcgcacaagttgataagcgttttctgatcgaaccggcttgcgttataagggatgctcaggagctatggaaagtAaaagaaaattgatttgagttacaatcaacttaaatgaaatatgtgcaataccttaggagcatgatgacttacatctgtaaactcagttctgtatctcccacagaccctgagcatctcgcacacgtaataaccgcataggttcgtcaagctcggttgcttataacactgcatacatatgtggatacgtcagtagtaagaagtgacaatcgtgatgtacataccaaataaatgctgacataccggccagcatccccttatgtacagtttctctctacttggattctttacatacccgccgcgtttcttataatggctgtgtgctctacaaagataaaagtaattatttatgataaatcgacttattacaaatgatctttacataatgttgggggtttgtttcgaacttacaagttaagcaaacataggaactccatgtacgcgtccttgtcatagtctaccggatcaagaactaggacggtttggtccgtcggatagacgaggaatagTAtatagtgttggctgcgaaaacagattatgaaattacgcaaggcatattttcatgtgcggttattaatctatgaacggaaagatgtggaagttgcttacccaaagtgataggggatcatgatgaCtcatttgtcggagtgcgtgagaaatgaggtggccaagtaatttcccacatcggccatctttctcttatgcagacgttcgatgtactcttttttctcctcgggtgcttattctttagtaatgcactatcctccgatatccgcacagtgtgggccacgttgcaaaccatcattggatttacgtaagcgattgaggcccccgttctttgagcgtctacccattgtgaccagaggaaatttgaaagttagaataactaacatttttattggcacacattgggtAataacgaactacatggaaagcttacaggcagcacgcgccgatgagattgatatctattttatccatcttaaagaatgcgtggaggtccttgaaactgatggcgaagtttgcgttaggtccatccttgaaagcgtcttccgggacatgcaccgtaatcttcccgagacctaactcacttgccctcaagtaccagtcacttagacataactcacttgccctcattggccatggtagttcacacatcaagttgtacggcaagaacggcttaccatattcatactcatttagcacttcatcggaggtccaagattgcattttgtcagcaagacctactacgctcttctgtgcgtccaaatactgatcaggttcaactggctttagcggactgcctcgacccttgaaagactgcaaaaccatccgcgtctcatactctgccattttctccttgttgtatgtggaaaccataacaggtataagcttgcgggctcacaggtacttggctgctcctttgatgtatctggctggggaggtggcagatgctcctcatggggtggagcaagagatgattgccgagcaggggacggctgccgaggttggggagttGgggagttaggtgcggcatgttgtggaggtggagaaggacctctaagtggtgatacttgtgggagtggagatccgggtagggtaggggagatcggaggggatggcggtgcaggaggtgcagccgtaTttggcactgatggagttggggtcgtggacgtgcactgtcccgtgaggatgatgtctcgacgatgccagagtatgaactggttaaccgcatccccgagaagttcaatcccctttggtgttgggatatcaagctccaacgacatctggtcgccattaacacgtgccacctggacccttgcgtagtccatcggaattgggctgttatggaactgtctacccggtatcgccaattcgaacacaacctcctttgtttttcccgctctccctatcggaacgacaaggttgcatggtgtcggacTAGttatactatctaccggataggttgtattttctaccgacccgacagagcttgggatctgcgtcgactgcgatccttgaggaactaggtttgggaaggcttgaggatgttgtgcagcaagacagtagaactgttgggtgacttattgtgtgacttgatctgtgatttcctagcgcatcttcgccttataggcgccacgcttcttgtaattttgggcttctgtggaaaccctgccttccaattcgtcttgcacgactgtcctctaaccctaccggagtgttatgcagttcccaaagcttcggttagctcgtcatactaccatcgagggacaaactctccggtctgctccttctggatgatctgttggagaggcgtggtcaagttctggatgtcaagacagtccaacagcatctcaccctcttctgtcacttgctgcgatgcccacacccaatttctagttcatttatttaggggctgcaccatcaaaggtttgctttcagccgcaaacttatcctccgtagcttgccatttcttctcatgaccggcgtatccacttgaccctaacctgtgtggatatatgttcttcttcgccaggtccgacatcttcttcctcctatctagggcttcagacgttgtcattctggccacgaccctgtcccactcgaccatcgaaatggtgccccattcttcaaatggattcttattcttctgaacataatgggtgttcatgtctgacttccactgtcgctagcgatgggaaattttttgcagtgcaaatttcctgccaagtgcctctgaccccggcggataaatgaggtgcttctgcagaccttcccacattaagttcttgacgtgtatgctaatgttcttccactcgtgcacgttgagaggcccatgaagtcttgccagcgtgtcgcatgcggtgctaaacttcgtcctgacatgttgcggctcgacgggtttgccatcattgttgagagcagcaatatagtacgtctccttcggcattaggttcctgctcctctcgccacgttttttctttggacgtgctccagcactcgtcgtcgtgtcagttggctgtggtcccgaggtcgcggtgtccgactcaagtttagccttgacggcatttcgtttcgaccgacgacgggtagccatctgcacagttcaatttggcagctctttgggtgaagctcatgccttatgtccagcgattcacccaacgccagatctttctccttcaaccattcaagaaattttcgtttctattcattacaaatccaaatggccgttcttctagggttgcgggctcttatctcgttcatgttcctgaatgtaccgctcgacgatggcgagctattgcaaaacgctgctatgtgcttccgctacatctttgaagtcctcatcatagaaccttttcttgcctacgatccctgtcccagctaactggccctcgtgtaaaggggggttacaccgatgtgttcagcgtccttcatgtaatcaatgcaacattctaccacctcctcagttgtgtacccctctatcattgatccctccggatgagctcagttatggacatacccttttaggacggacatgtacctctcgtacgcccacatctggtgcaggtataggggaccaatctcaataatctgaggtacgatgtggacaatcatatgctccatcatgttgaagtaagctggagggaaaaacatctcaagctgacaagctgtctcgattgcaaatttttgaaggggtcctaactcttcaggatcaaaaaccttctgtgatacacgattgaaaaagtagcacatccttgttatcactaactgagtgtgaactggcttgaccgctcttatagaaatcggtaggaagactgttaacatcttgtgacagtcatgagcattgtacctagagatggttaaatctttcagagatacaagttttctgacgttcgctgagaaaccagtcaggaatttcacactatgcaagcatctacataatttttttctcttccggtattagtgagtagcaagcgggaggaatatcaatcttcccatttggcagCTctCTTTTGGGTGAAGAAAATGCCTTATGTCCAAATTGACGAGGTCAGTCCGGGACTTCAACCCATCTTTCGTCTTACTCGGGATGTCCAGTAAAGTGCCAATGGTGCTATCAAaacacattcttctcaagatgcattacgtcgatggcatgacgaacctccaggtctttccagtaatccagatacctgaaaatattgagtgcttcttaaaaggcaggttactttcctctacaggtgcatcagtattttcttgatccgtccgtttcttcctcttgacgggcttcttctttggcttgccgaacacaatcttaatgttctttgtcagctcgaagacagagccaccagttcgtgtttccggagctaaatcgttctctactgtattgtcgaataatctggccttcgcacgccacctatgcctctgaggtaataaccgacgatgacgcatgtAcacacccttggttgacgaggtgaggtacttgtacgacgtcttgtcgatacatatgagacatccaaacttcccttaaactagcccaagagcgaaaagtttgccagtaagtcgttgatcgtaatgaatatgatggcatgcagagtaaaatgttccctacggtactcgtcccacattcgtaacccttcctcccacagttcttgcatgtcctccatcaatggttccagaaacacatctatgttaatcccaggctatcttcgaccttgtataaggatagacaaaagaatatacttttgcttctgacaaatccatgtaggcaagttatacatggttagcagcactggccaggtgctgtgtgtgctgcttaagtcaccgaacgggttcattactgtccgtgctcaatgcaaacttacatttctcgggtcctttgcaaattccgggtgtagtgcatcaaagttcttccactgtcgagcatcggcggggtgtcggatcttaccgtcatttttcctaccctcctggtgccatctcatcaactcggcatcgccacggttggaatatagccgctttaggcgatctttcacaggcaggtaccacatcaccatcctaggaatgtttttgttcttaaccaccggtgcatcatctttgtcgaccacctctccatcggaggctccgttgcccgtcttgtactgactcgtcccacatgttgggcaagagtctaagtccgcgaattccttgcggtgcaatatacaatgattttcacatgcatggatcttctaaacacctagagacaatggacatatcaatttcttcacttcatatctgttcgtcggtaacaggttcggcttaggaagcataactctcaaaagatccatcaaatcattgaagctagtgtccgaccatatccatgtctggccttcaatctaagaagttcaagcaccgagtgcagcaccgaatagtccttgtcgcatcctttcgcttcgtcgtacagaagctccttcgctgctttttccaatgcttcccaattatccaaccctcgtcttgtactagttaggacctctggttcaacgtgccgcaacatatcttctagatcaaaatcaataccttcattgtctacaccagagctaccgcattccgggatgtttccctgtgacatgtcttcgattataaaattttctacaccatcaaagcagaaatcatccgtcactttgttacgaccgccgacttccccttgaaaattccatatctcgtagcccttcttaaatctttattctacgatgtgcgacaatacttcattcggatcttgcagcaaaaattcgttctacaaactttgcatgggcaaaaattgctcctcaaattctccctcacagcatatgcctttgcgagctcaacgaatttggctgcttccttcaagaacgttggatgagctcttttcttgttgtacatccatgtccgatccatgacctacaataaagtttgtcagtaatacatccatgcccgattcaaacacgaatgtacttaaattggagagaactaatcacatagtaaattaaagttttacagactatttaaacagccgcacaacaattttaagcattaatAaaatattgtccatttctaaaaaatgaaaaaaaatcgtcctttcatccgaatgaaaataaatttaatagaagcaaacccaacttttcaatttaggtactaaatacttttataaacatgtaacggaatcattatgtatttgctaaaaaaaTAaaaaaaagtgcctacactactccatttataaaagtgcaagtttcttcgtactgcaccgataaaaactgacaaaaatggaagcaaatgaaggaggagaacaacctctacaccttttatatggaactcaatcaaagatttgaggtcgaaaaccttcccccctaatttgtggaggtttaggagagagaaaacgctggaaatcctcccaacggtcgagttgggggcttatatgCcccccgaccatcgcaagcggtcgccttaagtgggccgcacgggataatcgattatcccgtgcggtccgcttaaggcaaccgcacgggataatttccatcgtcggcatcacccaaaacccataatcgattatcccgtgcggtccacagcccgacgctggcattcgcctggttccaggtggagccactgggccaaaaggggccggcgtctaggaaaatcgcttatgtagtagtgtactgcatgttgcttgctgggatttttatataatatatactctccctctgccccataatataagggatttggggaggatgtgacatatcctaatataagaaatatagacaaacagtctgtccagattaattgtcctaagatgtatcatatccacctaaaatcccttatatcatgggacggatggagtaagagttaattaaccgtttcctctttttttcagttcgtgtgctctcccagaatgttacagaaaagtaatgggccgtaaagaatttgaccatccgaagttgcaggctgacacaattggaaaacgtttcttgtggaaagtgagcaattcgttctgttgtttatactccctctggtttttgatatataatgtcattaacttttctaagatatatttgactattcatattacttaaaaaatatataattactccctccgtcccataaTAAAGCAACCTATGACCAGATAGGACATTTCATAGTCCAATAAATCTGGAAATGTCCAGATTTGTTGGACTATGAAATGTCCCATCTGGTTCTAGGTTGCTATATTATGGGATGGATAGAGTACTATTTATTtttattttgacttgatttattattaaatattgagtaaagtccatcaccggttcctaaacttgtacagttgtgtcatcccggtccctaaactcgcaaatcgaccgttcaggtcctcaaacttgttcgactgtgtcatcccggtccttaaacttatagatcacttgtttaggtcctctaacttatttagttgtgtcaccccggtccctaaacttggatttgaatattatctgggtcaaataggacgttctaaagactttatatttaaaaataattcataacttttttcatgttaactctaatgaagacaaactttatatcaaacttgtagccctcgacgcgagctacaactttgtagttgaattttttttattttaagtcattttttgtcccaagatgtaattttaaaattaaaatttcaaaatctataaacatgcaacaatattttgggatcctaaacagttttaattcaaaaacttttcaactataaagttgtaggtcgcgtcgagggctacaattttaaattttgtcttcattagagttcacatgaaaaagttgtgaattattttttgatataaagtttttataccgtcctgtttagggaccggggtaacacaattgaacaaattggaggacctaaatgagtgatatgcaagtttagagatcaggatgacacagtcgaataagtttgtggacctgaatggtcgatttatgagtttagggaccgggatgatacagcggtacaagtttagggaccgttaatggactttatcttaaatattatttaagaattacttatattttttcattttgtcaaaaaattgaatagagcaaacatacgttaaaagtcagcGAcgttgtaaattaaaaactgaagggggtttatgcaatagatcaacgaactgaatcagctgcaagtttagggaccgggatgacacagtcgaacaagtttgagggcctgaacggtcgatttgcgagtttagagaccgggatggcacaacagtataagtttagggaccggtgatgaactttactctaaagatcaacatataacatatactgctcaagtaatcaagtggccatgcactggggctaatctatattttataacatgtatatacccttgaggtgctatatttttattgatctataatcaaaacgggagtcagatgctaattttcaatgaaagaaattgtttcagtgtatctctgaggaagaactgcttcaggccaccaaagagttagataaagagctgtcggtacgtaaaaaaattgcttggctgcgttcatattacactaatttttactgctgttgcataatcataggtagtttgcccattgccttgctataaattagatgcatgagatgagacggaatactccccggcaagagaagatctttctgcagaggaactcaaatgctcaggcacttgccaaagttattgtgcaactgcaaacatcgtcatgttcgccggagcaaaagcttccaatagattcagctataaggtacgtaatgtaaagtctgaactgaaatgaagaatttttttgaagttggtatttaattcagagcaatggtctattttcttttttcatttttaattccatatagtggacttggaggctggttatcgcctgatggcttgagcaatggtttcttttgctcacccctacaaaatctgcaggacatcacgaatgatcaggcaatgtatgtgtttcctttctggcctttcactgtaccgaatttaaatcacatctttggttgggtgtacatgtgttcagatcagcgatgttcttcaaccctgaggcagggaatccaattccaagactacttagcaatgtcaaagtacctgacaaggttggatcaatttaacttatgttactcctaacttactacgattaagttgcttattccaattaatttacattggagcccttagctcatcatcttggaattcatgggatgctgcagacggttacggaagctgacatctcaaggaggctgctctggcacacgtacccgggctcgaggccgccaccgcccatgtaattaaactaactccatttctggcaccacaaattcttgcgatcgatcgatggatcggatcgccatctgtttctgatggagttgttgggcgctgcatgcagcgttgagaggccggacaccatctggaagccgatcagcaagccgtcggcgccacgggaggagcacaagaacgccggaaccgggtggatggggcgggggAgagggaacgccgcccttgccgccgccgagacgacgacgcagctcctcaccgccagcagcagcagcagcagcagctacgggcatggggctgcaggcagccgcactgccgccgagacgcaacggagcagcagcagcagcagctccaggagaggttcccgtcgtgcggacatggtggcgccgcaaagccgcaacagcaggtttgatgacagcgacggcggcgcatacggtttccgaccgcttgggattgggagtgcgccgtggacaggagacggcaGCggtggcggccatggccgcgggagtgcgcagccacgtggttggtaggacactgggc
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| CDS seq | atgcagagctgccatgggaataccttctttctacaggtggctcgtgaacagatacccaagcatcgtctccccggcaaagggagccgccctgcagatggcatcgtcgtctacgacaacctctacctcgacatgaatcaaatcatccattattccttccacccgcaggaccagatgaacgccggcacagatgtgtgcgctccgacgacggtcagcgaggttttcgagtccatgttcgactacctggaccgcttgtttcgcatcgtcaggccgagaaggctccttacttggcaatggggttgctccgtgcgccaaaatgaacggaatgcgaagaggacgacgttcgcttgggtagccagaaagatatcagaaggggtctctgaccccaatgtcatcacgccagggactgaattcatggagaagatatcgcaagcgctcacgtactacatccgtgccagattgaatagcagtgatccagggtggaaacacatcatggtaatactctctgatgcaaatgttcctggagaaggagagcacaagatcatgtctttcatccgtgcacagcgcagcatggaaggctatgaccccaacacacgacattgcttgtttgggcatgatgcggatttgatcatgcttgctttggcatctcacgaagtccacttctctattttgcgtgagtttttgaacatatgggttctgagagagtacttggagattgaattaaagatactggacccatatgcacttgatcttctcatcgaggtatacaagacaaccttcaacaaaatgggagggtatattgtcaacatagaaaaggaatccctgaagaagtcatgtcgcgatgtgttgcgtgaagcttcagaaagtgaaagattagagctgagccgaaaactagaggacctctttttaatgaagaacctaagacttggattgccaggatggaagtcccggttctacagggaatatttcggtgtcgaaacttctaatgaaattggaaatcttcaaaacgacatggctcagaagtatttagaaggactttgttggatgcttcaatactatcttgcggacgtaccatcatggagctggtactacccattctatgttgctcctttcgtatctgacctcaaaagtcattgtcggttcgagatatctttcacctgtatctctgaggaagaactgcttcaggccaccaaagagttagataaagagctgtcgatgcatgagatgagacggaatactccccggcaagagaagatctttctgcagaggaactcaaatgctcaggcacttgccaaagttattgtgcaactgcaaacatcgtcatgttcgccggagcaaaagcttccaatagattcagctataagtggacttggaggctggttatcgcctgatggcttgagcaatggtttcttttgctcacccctacaaaatctgcaggacatcacgaatgatcaggcaatatcagcgatgttcttcaaccctgaggcagggaatccaattccaagactacttagcaatgtcaaagtacctgacaagacggttacggaagctgacatctcaaggaggctgctctggcacacgtacccgggctcgaggccgccaccgcccatcgttgagaggccggacaccatctggaagccgatcagcaagccgtcggcgccacgggaggagcacaagaacgccggaaccgggtggatggggcgggggAgagggaacgccgcccttgccgccgccgagacgacgacgcagctcctcaccgccagcagcagcagcagcagcagctacgggcatggggctgcaggcagccgcactgccgccgagacgcaacggagcagcagcagcagcagctccaggagaggttcccgtcgtgcggacatggtggcgccgcaaagccgcaacagcaggtttgatgacagcgacggcggcgcatacggtttccgaccgcttgggattgggagtgcgccgtggacaggagacggcaGCggtggcggccatggccgcgggagtgcgcagccacgtggttggtag
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| Protein seq | MQSCHGNTFFLQVAREQIPKHRLPGKGSRPADGIVVYDNLYLDMNQIIHYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLTWQWGCSVRQNERNAKRTTFAWVARKISEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHDADLIMLALASHEVHFSILREFLNIWVLREYLEIELKILDPYALDLLIEVYKTTFNKMGGYIVNIEKESLKKSCRDVLREASESERLELSRKLEDLFLMKNLRLGLPGWKSRFYREYFGVETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSHCRFEISFTCISEEELLQATKELDKELSMHEMRRNTPRQEKIFLQRNSNAQALAKVIVQLQTSSCSPEQKLPIDSAISGLGGWLSPDGLSNGFFCSPLQNLQDITNDQAISAMFFNPEAGNPIPRLLSNVKVPDKTVTEADISRRLLWHTYPGSRPPPPIVERPDTIWKPISKPSAPREEHKNAGTGWMGRGRGNAALAAAETTTQLLTASSSSSSSYGHGAAGSRTAAETQRSSSSSSSRRGSRRADMVAPQSRNSRFDDSDGGAYGFRPLGIGSAPWTGDGSGGGHGRGSAQPRGW |
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| Function | 5'-3' exoribonuclease 4 [UniProtKB/Swiss-Prot:Q9FQ04] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0017250 | OsLiXu_02g0017250.03 | Chr02 | 17724272 | 17725102 | + | NAM | ||
| CDS seq | atgcagagctgccatgggaataccttctttctacaggtggctcgtgaacagatacccaagcatcgtctccccggcaaagggagccgccctgcagatggcatcgtcgtctacgacaacctctacctcgacatgaatcaaatcatccattattccttccacccgcaggaccagatgaacgccggcacagatgtgtgcgctccgacgacggtcagcgaggttttcgagtccatgttcgactacctggaccgcttgtttcgcatcgtcaggccgagaaggctccttacttggcaatggggttgctccgtgcgccaaaatgaacggaatgcgaagaggacgacgttcgcttgggtagccagagtcagtcctttgcatttatttattttcttgcatgtcgatcagctagctagctgctga
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| Protein seq | MQSCHGNTFFLQVAREQIPKHRLPGKGSRPADGIVVYDNLYLDMNQIIHYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLTWQWGCSVRQNERNAKRTTFAWVARVSPLHLFIFLHVDQLASC |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0017250 | OsLiXu_02g0017250.02 | Chr02 | 17724272 | 17740601 | + | NAM | ||
| CDS seq | atgcagagctgccatgggaataccttctttctacaggtggctcgtgaacagatacccaagcatcgtctccccggcaaagggagccgccctgcagatggcatcgtcgtctacgacaacctctacctcgacatgaatcaaatcatccattattccttccacccgcaggaccagatgaacgccggcacagatgtgtgcgctccgacgacggtcagcgaggttttcgagtccatgttcgactacctggaccgcttgtttcgcatcgtcaggccgagaaggctccttacttggcaatggggttgctccgtgcgccaaaatgaacggaatgcgaagaggacgacgttcgcttgggtagccagaaagatatcagaaggggtctctgaccccaatgtcatcacgccagggactgaattcatggagaagatatcgcaagcgctcacgtactacatccgtgccagattgaatagcagtgatccagggtggaaacacatcatggtaatactctctgatgcaaatgttcctggagaaggagagcacaagatcatgtctttcatccgtgcacagcgcagcatggaaggctatgaccccaacacacgacattgcttgtttgggcatgatgcggatttgatcatgcttgctttggcatctcacgaagtccacttctctattttgcgtgagtttttgaacatatgggttctgagagagtacttggagattgaattaaagatactggacccatatgcacttgatcttctcatcgaggtatacaagacaaccttcaacaaaatgggagggtatattgtcaacatagaaaaggaatccctgaagaagtcatgtcgcgatgtgttgcgtgaagcttcagaaagtgaaagattagagctgagccgaaaactagaggacctctttttaatgaagaacctaagacttggattgccaggatggaagtcccggttctacagggaatatttcggtgtcgaaacttctaatgaaattggaaatcttcaaaacgacatggctcagaagtatttagaaggactttgttggatgcttcaatactatcttgcggacgtaccatcatggagctggtactacccattctatgttgctcctttcgtatctgacctcaaaagtcattgtcggttcgagatatctttcacctgtatctctgaggaagaactgcttcaggccaccaaagagttagataaagagctgtcgatgcatgagatgagacggaatactccccggcaagagaagatctttctgcagaggaactcaaatgctcaggcacttgccaaagttattgtgcaactgcaaacatcgtcatgttcgccggagcaaaagcttccaatagattcagctataagtggacttggaggctggttatcgcctgatggcttgagcaatggtttcttttgctcacccctacaaaatctgcaggacatcacgaatgatcaggcaatatcagcgatgttcttcaaccctgaggcagggaatccaattccaagactacttagcaatgtcaaagtacctgacaagacggttacggaagctgacatctcaaggaggctgctctggcacacgtacccgggctcgaggccgccaccgcccatcgttgagaggccggacaccatctggaagccgatcagcaagccgtcggcgccacgggaggagcacaagaacgccggaaccgggtggatggggcgggggAgagggaacgccgcccttgccgccgccgagacgacgacgcagctcctcaccgccagcagcagcagcagcagcagctacgggcatggggctgcaggcagccgcactgccgccgagacgcaacggagcagcagcagcagcagctccaggagaggttcccgtcgtgcggacatggtggcgccgcaaagccgcaacagcaggtttgatgacagcgacggcggcgcatacggtttccgaccgcttgggattgggagtgcgccgtggacaggagacggcaGCggtggcggccatggccgcgggagtgcgcagccacgtggttggtag
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| Protein seq | MQSCHGNTFFLQVAREQIPKHRLPGKGSRPADGIVVYDNLYLDMNQIIHYSFHPQDQMNAGTDVCAPTTVSEVFESMFDYLDRLFRIVRPRRLLTWQWGCSVRQNERNAKRTTFAWVARKISEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHDADLIMLALASHEVHFSILREFLNIWVLREYLEIELKILDPYALDLLIEVYKTTFNKMGGYIVNIEKESLKKSCRDVLREASESERLELSRKLEDLFLMKNLRLGLPGWKSRFYREYFGVETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSHCRFEISFTCISEEELLQATKELDKELSMHEMRRNTPRQEKIFLQRNSNAQALAKVIVQLQTSSCSPEQKLPIDSAISGLGGWLSPDGLSNGFFCSPLQNLQDITNDQAISAMFFNPEAGNPIPRLLSNVKVPDKTVTEADISRRLLWHTYPGSRPPPPIVERPDTIWKPISKPSAPREEHKNAGTGWMGRGRGNAALAAAETTTQLLTASSSSSSSYGHGAAGSRTAAETQRSSSSSSSRRGSRRADMVAPQSRNSRFDDSDGGAYGFRPLGIGSAPWTGDGSGGGHGRGSAQPRGW
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0017250 | OsLiXu_02g0017250.01 | Chr02 | 17724272 | 17740601 | + | NAM | ||
| CDS seq | atgcagaagatatcagaaggggtctctgaccccaatgtcatcacgccagggactgaattcatggagaagatatcgcaagcgctcacgtactacatccgtgccagattgaatagcagtgatccagggtggaaacacatcatggtaatactctctgatgcaaatgttcctggagaaggagagcacaagatcatgtctttcatccgtgcacagcgcagcatggaaggctatgaccccaacacacgacattgcttgtttgggcatgatgcggatttgatcatgcttgctttggcatctcacgaagtccacttctctattttgcgtgagtttttgaacatatgggttctgagagagtacttggagattgaattaaagatactggacccatatgcacttgatcttctcatcgaggtatacaagacaaccttcaacaaaatgggagggtatattgtcaacatagaaaaggaatccctgaagaagtcatgtcgcgatgtgttgcgtgaagcttcagaaagtgaaagattagagctgagccgaaaactagaggacctctttttaatgaagaacctaagacttggattgccaggatggaagtcccggttctacagggaatatttcggtgtcgaaacttctaatgaaattggaaatcttcaaaacgacatggctcagaagtatttagaaggactttgttggatgcttcaatactatcttgcggacgtaccatcatggagctggtactacccattctatgttgctcctttcgtatctgacctcaaaagtcattgtcggttcgagatatctttcacctgtatctctgaggaagaactgcttcaggccaccaaagagttagataaagagctgtcgatgcatgagatgagacggaatactccccggcaagagaagatctttctgcagaggaactcaaatgctcaggcacttgccaaagttattgtgcaactgcaaacatcgtcatgttcgccggagcaaaagcttccaatagattcagctataagtggacttggaggctggttatcgcctgatggcttgagcaatggtttcttttgctcacccctacaaaatctgcaggacatcacgaatgatcaggcaatatcagcgatgttcttcaaccctgaggcagggaatccaattccaagactacttagcaatgtcaaagtacctgacaagacggttacggaagctgacatctcaaggaggctgctctggcacacgtacccgggctcgaggccgccaccgcccatcgttgagaggccggacaccatctggaagccgatcagcaagccgtcggcgccacgggaggagcacaagaacgccggaaccgggtggatggggcgggggAgagggaacgccgcccttgccgccgccgagacgacgacgcagctcctcaccgccagcagcagcagcagcagcagctacgggcatggggctgcaggcagccgcactgccgccgagacgcaacggagcagcagcagcagcagctccaggagaggttcccgtcgtgcggacatggtggcgccgcaaagccgcaacagcaggtttgatgacagcgacggcggcgcatacggtttccgaccgcttgggattgggagtgcgccgtggacaggagacggcaGCggtggcggccatggccgcgggagtgcgcagccacgtggttggtag
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| Protein seq | MQKISEGVSDPNVITPGTEFMEKISQALTYYIRARLNSSDPGWKHIMVILSDANVPGEGEHKIMSFIRAQRSMEGYDPNTRHCLFGHDADLIMLALASHEVHFSILREFLNIWVLREYLEIELKILDPYALDLLIEVYKTTFNKMGGYIVNIEKESLKKSCRDVLREASESERLELSRKLEDLFLMKNLRLGLPGWKSRFYREYFGVETSNEIGNLQNDMAQKYLEGLCWMLQYYLADVPSWSWYYPFYVAPFVSDLKSHCRFEISFTCISEEELLQATKELDKELSMHEMRRNTPRQEKIFLQRNSNAQALAKVIVQLQTSSCSPEQKLPIDSAISGLGGWLSPDGLSNGFFCSPLQNLQDITNDQAISAMFFNPEAGNPIPRLLSNVKVPDKTVTEADISRRLLWHTYPGSRPPPPIVERPDTIWKPISKPSAPREEHKNAGTGWMGRGRGNAALAAAETTTQLLTASSSSSSSYGHGAAGSRTAAETQRSSSSSSSRRGSRRADMVAPQSRNSRFDDSDGGAYGFRPLGIGSAPWTGDGSGGGHGRGSAQPRGW
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 17725045 | 17725178 | + | OsLiXu_02g0017250.01 | OsLiXu_02g0017250.02,OsLiXu_02g0017250.01 | All |
| A5 | Chr02 | 17724764 | 17724979 | + | OsLiXu_02g0017250.01 | OsLiXu_02g0017250.03,OsLiXu_02g0017250.02,OsLiXu_02g0017250.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.215542 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0481900 | RBH | 1.860863 | 2.046525 | 0.689718 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g28074 | RBH | 1.222871 | 1.361350 | 0.190694 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0481900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0017260 | RBH | 0.448953 | 5.108694 | 5.710034 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0017360 | RBH | 0.236665 | 0.229460 | 1.344258 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0017250 | RBH | 0.609962 | 0.0 | 8.311603 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0017170 | RBH | 0.229231 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0017040 | RBH | 1.098463 | 6.515878 | 9.034083 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0277400 | RBH | 3.66252 | 17.5818395 | 0.321642 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0016810 | RBH | 0.293059 | 0.233150 | 0.338620 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0296600 | RBH | 6.910584 | 52.595951 | 4.7683605 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0017350 | RBH | 0.099767 | 0.117287 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0016920 | RBH | 0.140850 | 5.237320 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0017460 | RBH | 5.457151 | 17.649994 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0009160 | RBH | 0.537017 | 0.0 | 0.987254 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0016950 | RBH | 0.306084 | 0.731550 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G017400 | RBH | 0.033274 | 0.000000 | 1.685649 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0017120 | RBH | 2.585562 | 13.053576 | 2.464780 |
