Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_02g0009720 | OGI:02021140 | 15/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr02:7390694-7393576 | ||||||||
| Gene Symbol | RLCK70, OsRLCK70 | ||||||||||
| DNA seq | tcagacgaaacaggggaatcgtctccaccagcgggcacactggcggaggcgtcgaagaacagtctgcatggacggcctgcgctgcgggtccatcatggtgcactccacgccgagcttgaacacggccttcatctccttcaagtaccgtgccgcgtcagaggcgatatcgttgtcaaggacatcgtcggtgaataacttatcgtcgtagccgtgccgtgcccatgtattcaagtaggcttttgcccatgtcgtcagatggccgtgctgatcgttgactacttttcccgtgacgatctccagcaggacgacgccaaagctgtacacgtcgaccttctcgctcacttcggtgtccgtatactgcagcaaaattaaatggcagccagtcaatcctgaagtaacatgatcgttaactagtttaacgatttctgaattgggaacgtacgcattaattaattatgcggcctcacctggagcaaaatacccgaaggcccctgcatgaagacggacgtttcccaacagcgtgttgcggccggcaagattgatccgggcataactgaagccagagatcttggccttgaagttgccgtcaagtaggatgttggccggcttgatgtcgccgtgaatgatcggccttcgacaaccgtgatgcatgtagaggattgctccggcgacgtcaatgacgatggccagccgctttcgccagcccagcggcgggcgcaggcgcctctcgccggcctgcgtgttgtggtgtatccacttgtccaggctgccgttctccatgtcctcgtacagaatcacgatcatgtcgttcctccgaatgtagcctaacaggataatgatgttggggtggacgatcatgccgagcgtggtctcctccgtttggcgccggttctcgagttcggcgtccacactcctggtctcgttctgcatcttcttcacagttaatctcctgtaggtgtcgctgctgtcgtcaataacccccaaccggtacagtgggtctcctgtcgttgtgcctgtgctactgatcctgtttacgtccacagcgttgtggactagatgatcctccattttatcacttaaaactataggagtcatgtcgtcattgcgagccctgcatctgcaggatgcgacaacacatcctacggcaaagatgaccacgccaccagcgattacggagatgggcacgatgctgttggacaggttgagatgctgcatatctgaggacagcttgtcgatgtcgtcagggagtctgccggataattgattgttggataggtcaagtaactctaaagctgagcaagcgtatagcacagtggggaaatcaccggtgagattgttgtaagagaggtctatggaagtcaggttcttgaggctgtaaatggaggctggaattggtttggctatgtggaaacttgggaggaagagggcaatgacctggccgccagttgtacctaaaagcctaagctgatagggaaaggcggacaattcactttatacacttcaacactccccctcacgcgagaccccctcaagtaaaggcggacaattcactttatacacttcaacactccccctcaagtctcaagcgtggaatattggagtgggctacaattattttatttaattgcgcgtcagctaggattcgaactcgagacctctggctctgataccatattaagttacatgcaccagccagttgcacctaaaagcctaagctgataaggaaaggcgggcaattcactttatacacttcaacagtcggtgttgggctgcaccgtcgattgggagctggactttaaggggagaaacagtagtagtaagatggcgagaatgttgtagatagccaatttttgtgtgaagtatgttcattcttggatgctcaagacatggggtggggtggggtgagcttaaataggcactgccgaggaagacgaacccaattttttctccgatactccagtgaatgatactctgatgccaacttgccaaggcaaaaggaaaaaagatgctcgatctgatggaaacatgtgaattcagcactacgctatctagttttcatgagataacatcctatcagtgttgtctctatcattcccggtttaattaaacccggcactgataaagattatttcgtaccctccaaactcgtgtgcattctaaaaaacccgaccccgatcacatcagtgctggtttttaaaaaaactcggcaccgatggactaaatggagagaaaaaccggcatcaataggtggcggcgagaaaaaaattaactccggcctactccttttttgtcaatccccaagggtgtgtttgaggagaagatgattgaggagattggaaagatacgcaaaacgaggtgagccattagctcatgattaattgagtattaactattttaaattttaaaaatggattaatatgattttttaaaacaactttcctatagaaattttttttgcaaaaaacgcaccgtttagtagtttgaaaagcgtgcgcgtggaaaacgagactcaatctcccctgtctccccgacaaacagagcccaagtcttctagcctcatcctatctcctcgccctccccatctcctttttttgcgaatgccatcccaacatcttctcactgttcctcagatctctcctccaaggtctcccccggggacatcgctgctcctccacgctttgtccataacggtgcccgctcctccttgctacctccgagctctctctctggcggtgcactctcctcctcgccatttcctcgtcgccttcgggctttttctccgtagctgcgccggatccagtcacctggaggccgggaccaccggatttgttcttcttgaggccagggcttgccgaatccaaccgcctctgacctcaccgccat
More
|
||||||||||
| CDS seq | atggcggtgaggtcagaggcggttggattcggcaagccctggcctcaagaagaacaaatccggtggtcccggcctccaggtgactggatccggcgcagctacggagaaaaagcccgaaggcgacgaggaaatggcgaggaggagagtgcaccgccagagagagagctcggaggtagcaaggaggagcgggcaccgttatggacaaagcgtggaggagcagcgatgtccccgggggagaccttggaggagagatctgaggaacacctcaagaacctgacttccatagacctctcttacaacaatctcaccggtgatttccccactgtgctatacgcttgctcagctttagagttacttgacctatccaacaatcaattatccggcagactccctgacgacatcgacaagctgtcctcagatatgcagcatctcaacctgtccaacagcatcgtgcccatctccgtaatcgctggtggcgtggtcatctttgccgtaggatgtgttgtcgcatcctgcagatgcagggctcgcaatgacgacatgactcctatagttttaagtgataaaatggaggatcatctagtccacaacgctgtggacgtaaacaggatcagtagcacaggcacaacgacaggagacccactgtaccggttgggggttattgacgacagcagcgacacctacaggagattaactgtgaagaagatgcagaacgagaccaggagtgtggacgccgaactcgagaaccggcgccaaacggaggagaccacgctcggcatgatcgtccaccccaacatcattatcctgttaggctacattcggaggaacgacatgatcgtgattctgtacgaggacatggagaacggcagcctggacaagtggatacaccacaacacgcaggccggcgagaggcgcctgcgcccgccgctgggctggcgaaagcggctggccatcgtcattgacgtcgccggagcaatcctctacatgcatcacggttgtcgaaggccgatcattcacggcgacatcaagccggccaacatcctacttgacggcaacttcaaggccaagatctctggcttcagttatgcccggatcaatcttgccggccgcaacacgctgttgggaaacgtccgtcttcatgcaggggccttcgggtattttgctccaggattgactggctgccatttaattttgctgcagtatacggacaccgaagtgagcgagaaggtcgacgtgtacagctttggcgtcgtcctgctggagatcgtcacgggaaaagtagtcaacgatcagcacggccatctgacgacatgggcaaaagcctacttgaatacatgggcacggcacggctacgacgataagttattcaccgacgatgtccttgacaacgatatcgcctctgacgcggcacggtacttgaaggagatgaaggccgtgttcaagctcggcgtggagtgcaccatgatggacccgcagcgcaggccgtccatgcagactgttcttcgacgcctccgccagtgtgcccgctggtggagacgattcccctgtttcgtctga
More
|
||||||||||
| Protein seq | MAVRSEAVGFGKPWPQEEQIRWSRPPGDWIRRSYGEKARRRRGNGEEESAPPERELGGSKEERAPLWTKRGGAAMSPGETLEERSEEHLKNLTSIDLSYNNLTGDFPTVLYACSALELLDLSNNQLSGRLPDDIDKLSSDMQHLNLSNSIVPISVIAGGVVIFAVGCVVASCRCRARNDDMTPIVLSDKMEDHLVHNAVDVNRISSTGTTTGDPLYRLGVIDDSSDTYRRLTVKKMQNETRSVDAELENRRQTEETTLGMIVHPNIIILLGYIRRNDMIVILYEDMENGSLDKWIHHNTQAGERRLRPPLGWRKRLAIVIDVAGAILYMHHGCRRPIIHGDIKPANILLDGNFKAKISGFSYARINLAGRNTLLGNVRLHAGAFGYFAPGLTGCHLILLQYTDTEVSEKVDVYSFGVVLLEIVTGKVVNDQHGHLTTWAKAYLNTWARHGYDDKLFTDDVLDNDIASDAARYLKEMKAVFKLGVECTMMDPQRRPSMQTVLRRLRQCARWWRRFPCFV |
||||||||||
| Function | Leucine-rich repeat receptor protein kinase EMS1 [UniProtKB/Swiss-Prot:Q9LYN8] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_02g0009720 | OsLiXu_02g0009720.01 | Chr02 | 7390694 | 7393576 | - | NAM | ||
| CDS seq | atggcggtgaggtcagaggcggttggattcggcaagccctggcctcaagaagaacaaatccggtggtcccggcctccaggtgactggatccggcgcagctacggagaaaaagcccgaaggcgacgaggaaatggcgaggaggagagtgcaccgccagagagagagctcggaggtagcaaggaggagcgggcaccgttatggacaaagcgtggaggagcagcgatgtccccgggggagaccttggaggagagatctgaggaacacctcaagaacctgacttccatagacctctcttacaacaatctcaccggtgatttccccactgtgctatacgcttgctcagctttagagttacttgacctatccaacaatcaattatccggcagactccctgacgacatcgacaagctgtcctcagatatgcagcatctcaacctgtccaacagcatcgtgcccatctccgtaatcgctggtggcgtggtcatctttgccgtaggatgtgttgtcgcatcctgcagatgcagggctcgcaatgacgacatgactcctatagttttaagtgataaaatggaggatcatctagtccacaacgctgtggacgtaaacaggatcagtagcacaggcacaacgacaggagacccactgtaccggttgggggttattgacgacagcagcgacacctacaggagattaactgtgaagaagatgcagaacgagaccaggagtgtggacgccgaactcgagaaccggcgccaaacggaggagaccacgctcggcatgatcgtccaccccaacatcattatcctgttaggctacattcggaggaacgacatgatcgtgattctgtacgaggacatggagaacggcagcctggacaagtggatacaccacaacacgcaggccggcgagaggcgcctgcgcccgccgctgggctggcgaaagcggctggccatcgtcattgacgtcgccggagcaatcctctacatgcatcacggttgtcgaaggccgatcattcacggcgacatcaagccggccaacatcctacttgacggcaacttcaaggccaagatctctggcttcagttatgcccggatcaatcttgccggccgcaacacgctgttgggaaacgtccgtcttcatgcaggggccttcgggtattttgctccaggattgactggctgccatttaattttgctgcagtatacggacaccgaagtgagcgagaaggtcgacgtgtacagctttggcgtcgtcctgctggagatcgtcacgggaaaagtagtcaacgatcagcacggccatctgacgacatgggcaaaagcctacttgaatacatgggcacggcacggctacgacgataagttattcaccgacgatgtccttgacaacgatatcgcctctgacgcggcacggtacttgaaggagatgaaggccgtgttcaagctcggcgtggagtgcaccatgatggacccgcagcgcaggccgtccatgcagactgttcttcgacgcctccgccagtgtgcccgctggtggagacgattcccctgtttcgtctga
More
|
|||||||
| Protein seq | MAVRSEAVGFGKPWPQEEQIRWSRPPGDWIRRSYGEKARRRRGNGEEESAPPERELGGSKEERAPLWTKRGGAAMSPGETLEERSEEHLKNLTSIDLSYNNLTGDFPTVLYACSALELLDLSNNQLSGRLPDDIDKLSSDMQHLNLSNSIVPISVIAGGVVIFAVGCVVASCRCRARNDDMTPIVLSDKMEDHLVHNAVDVNRISSTGTTTGDPLYRLGVIDDSSDTYRRLTVKKMQNETRSVDAELENRRQTEETTLGMIVHPNIIILLGYIRRNDMIVILYEDMENGSLDKWIHHNTQAGERRLRPPLGWRKRLAIVIDVAGAILYMHHGCRRPIIHGDIKPANILLDGNFKAKISGFSYARINLAGRNTLLGNVRLHAGAFGYFAPGLTGCHLILLQYTDTEVSEKVDVYSFGVVLLEIVTGKVVNDQHGHLTTWAKAYLNTWARHGYDDKLFTDDVLDNDIASDAARYLKEMKAVFKLGVECTMMDPQRRPSMQTVLRRLRQCARWWRRFPCFV
More
|
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0227500 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g13410 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0227500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0009570 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0009660 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0009520 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0009340 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0009480 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0119600 | RBH | 0 | 0 | 0.0145785 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0009290 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0122200 | RBH | 0.0089895 | 0 | 0.0063435 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0009740 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0009380 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0009710 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0009800 | SBH | 3.465631 | 0.668533 | 2.012019 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0009430 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G009640 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0009450 | RBH | 0.0 | 0.0 | 0.0 |
