Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_01g0028990 | OGI:01002250 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:30030700-30061030 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | gacccagattgtgactagtaccttatctcaggcatcatgcaaggccggaccaatcccaaactgtaacatccactaagtacatatccatatgtatcatcggtcatcaccactctaaacatcttatgtacattccctctgttctggtagcccaacaaacacatatgcacacatcaccagggaagcctggaaagtgggggaaaaaaggtctcgcacctctcatacaacaagcacacgcctcagcgtaatagcagtaacacacatattaagcctcggtggcaaatatactggtctaatctaataacccgctggtcactggctagtgttaggagtcgtctgcctgctatcccactgagcatgcaccgtgtcgggagataatggcgggtcaggtcccttcttgtctttgcctccatctttctccatcacgcataggtcctgtacccccttgagcccctcgagcacctccttgatcggcggcctcatctcgccgttctgctgcaggcaccggaaagccagctcggcgaccatggtcatcatcttcttcgtcgccgggtcggactcgtagccgagctcgaggtccacgagctcctcgagctggctcttctggatcctgttgatggccatgccggccaggttgatctcgttccgctgccgggtgatgtccaccgccggcttcgacgagatgagctccaccaggacgacgccgaagctgtacacatcgctcttgtcggtaagctggtagcattggtgatactccggatccacgtatctgcaaatgcacaagaacaaaattgaaaaaaagggcatattagttaggcgtaaaaatacgagaagctcttggacaaactagttgatgcatcgtatcatatcactgcgcctggaccggtgaggcgacgtggacgtgacacgctgaaacgtgactgcttaccctggggtgccctggggagcggtggagacgtgcgtgacgtcgagggggaagaggcgggagaggccaaagtcggcgaccttgacgtggaagtcggcgtcgaggaggatgttggtggtcttgacgtcgcggtgcacgatgggtggctcgatggcgtggaggtacgtgagcgcggcggccgactcgacggcgatgttgaggcggagcggccacgagagcgcgcgctcctgcgcgcggtggccgtgcaggtggtcggccaccgtgccgttggccacgaactcgtacaccaggagcagctccctgctctggctcgacgtgcacccgtagaacatcaccaggttcgggtgccgcagccgcgacaggatcgccgcctcgttcacgaactgctccacccgccggtagctgttgttgtacagccgcttcaccgccaccacgcgcccgtctcgaagtatccctacattgatacgtcaacattgacacattgttactttgtaagtaagcatcaaagcatgaaaaagatgttgccgttgtctgtcacaatgtatgtgtacctttgtagacggtgccgaagccgccatcaccgagctctctgttctcgttgaaggaatcggtggcctcctcgagctcctcgtagctgaagaggtgagtctgcaggtccttgacactgccggactccatgtcgccgcccatggagcgaggtgtcccgccggagccgctgtacttgaggagcttggaagatgagttcaccttcttgtgctttctcttgcgaacgaagaagacggtggctattaatccaagagcgaacaccgcagataatcccccgccaaccacacctgaaacagcagcgaaagaagttgtaaatcagttcaggctgtaattcctgtaaaccaaaatcaggatcagcattgttttgaggattttttgcacctaaattttcccccggtataattaataaacgttagttgtactgacaaaacagaatgaaaatgctcattaattgatctgtatgtgagttacctgctataatttttatcttcgggttcgatcctgcatataataagcaaaaaacaaaaaaaaaagatttgtcaggaaaataaaattataatgcaagctgaatgcctacttttggTtttttgatcaaataattatttgttttgcatctgctgctgatgtaaataatgtaatacaaattataaagaggcatttttgggaacttgaccatgttcgctgttttctcctggtaagactgtctataactctatatagcaacctacaaagactggaaaccttgcacataatttaagggatggctttataccttttgactacacgtttgcagctatgaactatgaaaatttcaaatttggtactaacataagaagaagatccatgatcttttctttttatcttttttcccttattttgttgAaaaaaaaactattttcttttgtgaggatatggtgcatcacgtcatgctagataaaaagattaggactttggaaaaaggttgtggcaaagggtacgtggttttcttgtaggtaagatatcaacatcagaaaagaacactgaagatcagtttcgagaatgAaaaaaaaaaagaacacagaagaagtcataaagccaagcaaggcatactcattgtacgctttacaggaacgatcaggaacatttcaccatgacgtcatagcattggaaaagcatccaaacaaaagatcaattttctgtgtaaagtcatggttcctgccaacatttccaggttttgagccttaaaagtcgcctggccttctcttaggttaggttaaaagatgagtagatcagctcgaaagaaacatgcatcccaaagaccgtacacaaacagtttgaaccatagattttttttctggtccaaagtaattgcatagccccatatctgaagcaagcagatgttaacttgtcaattgcaactcctaaacaaaagatactgcctgtggcttcggtgctcatgtaatgagtaatgtgaacaccggaagtgcaggtcacaacaatcaattcaggctttattaattgtttttttatgAaaaagaaaatcaattcaggcttacaggtattgtgcctttcgttctgaaagtgtgtgataagatgtcgacctccgaaattaacaagactgggactagcacacatcaacttttgctgtgtgtcgacaagtggaccgcaattcaccgcaccaaacccatttattcgtcggttagctcttgccgggaagcgttattgtacttaacagaaggagctggagtactgaactacaaactgttctaacactcgactaattatgtgtgttgagcccacgtagtattgtagcaccgaaactaataatcacggaacgttggcacaccagcaagatgcactcgaacactaaaaatggaatgattactagtagaagtgattggcacagcagaaagctgcactatagacaactaaaagcggtagtatgataagtagaaaagatcaatcaaaattctggtgtccacagatatagctatgtgcatatttagttggtgcagggctggaagttatactttctttgtaaataaagaaaaaaaatcaacagagctcaacggtttctgaattctgaaccggaatgtgcccccctttgaattggagaaaaaacaaaagaactgaaatcctatgctattttattcatgcctttgattcgtagaaatgagaaaagaaaaaaacgtagaaaactttcctattcctacgattctagaggaaaaacgtagaaaatttaatatccactctaatctcatggaaaacttccctcgagtctatctctctcatatgatttctgtgtttttcctgtggtccaatcaaacggtcattcatgtgttttttctatgttttacaatactctattttacacttgtatttttttatcccgcgattcaaagggccgctaaaactctgaagcaagtaaagctgcttgactgcttcgctgcgcatctagttaatctactccctattaatatttcttttccgcgtcaccgtacagaagcagatgtgatcgtcgtagctaaacgggattagcaaccgctaatcaaataatctccgggacctacggatcgtaatcaaggagatttatggagaaacggtgctattccaccatcagggcctttaatgcttcatagtgcgcctccgtcgagcgaagtgaggtacgcgagagtacgaactggactgacgcacttaataaacgctccggtccgtttcacacgctgatatttctcggcatgatctactcagaccatgactgcatgagtgcgatttttgtgtgaactgtggaggaggctatccgaatgtcgcgtggattaatctccaagcgacaggcaatgtgctaattaaccaagtaatgattcgcccggaaactcagcgtactagtacttatactaggcttggttttgatgaggaaaaaattaacggcttaccggccaagcgcagggtggagtcggatatcttgctgcaggcgtcgctgtccacgaggccattggcgcagaggcagcccaagaacttgccgttctggttgtagccgcacttgccgctggttagctcgcaccgggagcaccggtcgctccggtcccagctcatctggaaccccttgcggagcgacgcgatgtagccgtctttcctccacgcgggatcgttcgcgtcggacgggagggagccgccgagcacgggcacgccgtacaccgccgagcacccgctgtgccagaggtcgccgggaggcagggggctcgccgggagcaggaacgactgcgtgggcgcgtcctcggagttctcgccgcaggtgagcgggtggatgctcggcggcttgggtggggcattggctgccggcccgaaggcgcagcggaagaagaagatgagcatgccgacggtgtcggccaggtgcagcgacgagggtgccggtgggatggtcacgttatggctgactacggggcaggtgccgttggcgacgtcggcgtcggcgagggagacggtgaggctggcgtagtcaatgcgcgacaccgtgtagctgtcgttgcccagcatcatgacggccttgccgccg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ggaccctgtactggtgtgtccggaaggggagaatcagagtggtgttgtccacgcagcggaggccgaggccggggtagccacagcccaaggtggatgagttgtcgatcagccagaacgggtaggcgacgggaacgtcgccgcaggtggcgttgcggcaggcggagggggaggcatcggcgtcggcgaagaggacgagcacgacggggaggaggaggaggaggagcggaggaggcatggttgtgtgcaggggtgtcgtgtgcgtgtgtggaggaagggagaggcagaagatcgagctcccgattttcccggtgaaactgtgtgcgtgagagtc
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| CDS seq | atgcctcctccgctcctcctcctcctcctccccgtcgtgctcgtcctcttcgccgacgccgatgcctccccctccgcctgccgcaacgccacctgcggcgacgttcccgtcgcctacccgttctggctgatcgacaactcatccaccttgggctgtggctaccccggcctcggcctccgctgcgtggacaacaccactctgattctccccttccggacacaccagtacagggtcctggacatcgagtacgggaagcacaccatctccctcaccgacgccgacatggcacaccccgacacaaacagcagctgcccgcacctacacgccaacctcaccatcgacgacaactcctggctgcagctcgcgtcctccgactccaacatcaccttcctctacaactgcaagagcaactcctccttgctgtcctcgacctccgccgtgaagctaactggatgtggagctggaccggagcacatcggtagttcgtacgtgttcctggatggctggatcacgggtgaagcgtacgattacgagtgcgagacggtggtggtggcgccggtgatcgatgcgcacaagaaggccatggtggacgcgcacgggggtcttcctcccgcggacggatcatttggcgaggtgctgagcgctgggttcgagctgacatacagcgctcactccgacaagtgcggcaaatgcgagcgaaccaagggGtggtgcggctaccggcacaacgagacgtccaccaccatggatttcacctgtttctgcgacgaaggcccgaccaagagccattgcggatcgaacccgaagataaaaattatagcaggtgtggttggcgggggattatctgcggtgttcgctcttggattaatagccaccgtcttcttcgttcgcaagagaaagcacaagaaggtgaactcatcttccaagctcctcaagtacagcggctccggcgggacacctcgctccatgggcggcgacatggagtccggcagtgtcaaggacctgcagactcacctcttcagctacgaggagctcgaggaggccaccgattccttcaacgagaacagagagctcggtgatggcggcttcggcaccgtctacaaagggatacttcgagacgggcgcgtggtggcggtgaagcggctgtacaacaacagctaccggcgggtggagcagttcgtgaacgaggcggcgatcctgtcgcggctgcggcacccgaacctggtgatgttctacgggtgcacgtcgagccagagcagggagctgctcctggtgtacgagttcgtggccaacggcacggtggccgaccacctgcacggccaccgcgcgcaggagcgcgcgctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacctccacgccatcgagccacccatcgtgcaccgcgacgtcaagaccaccaacatcctcctcgacgccgacttccacgtcaaggtcgccgactttggcctctcccgcctcttccccctcgacgtcacgcacgtctccaccgctccccagggcaccccaggatacgtggatccggagtatcaccaatgctaccagcttaccgacaagagcgatgtgtacagcttcggcgtcgtcctggtggagctcatctcgtcgaagccggcggtggacatcacccggcagcggaacgagatcaacctggccggcatggccatcaacaggatccagaagagccagctcgaggagctcgtggacctcgagctcggctacgagtccgacccggcgacgaagaagatgatgaccatggtcgccgagctggctttccggtgcctgcagcagaacggcgagatgaggccgccgatcaaggaggtgctcgaggggctcaagggggtacaggacctatgcgtgatggagaaagatggaggcaaagacaagaagggacctgacccgccattatctcccgacacggtgcatgctcagtgggatagcaggcagacgactcctaacactagccagtga
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| Protein seq | MPPPLLLLLLPVVLVLFADADASPSACRNATCGDVPVAYPFWLIDNSSTLGCGYPGLGLRCVDNTTLILPFRTHQYRVLDIEYGKHTISLTDADMAHPDTNSSCPHLHANLTIDDNSWLQLASSDSNITFLYNCKSNSSLLSSTSAVKLTGCGAGPEHIGSSYVFLDGWITGEAYDYECETVVVAPVIDAHKKAMVDAHGGLPPADGSFGEVLSAGFELTYSAHSDKCGKCERTKGWCGYRHNETSTTMDFTCFCDEGPTKSHCGSNPKIKIIAGVVGGGLSAVFALGLIATVFFVRKRKHKKVNSSSKLLKYSGSGGTPRSMGGDMESGSVKDLQTHLFSYEELEEATDSFNENRELGDGGFGTVYKGILRDGRVVAVKRLYNNSYRRVEQFVNEAAILSRLRHPNLVMFYGCTSSQSRELLLVYEFVANGTVADHLHGHRAQERALSWPLRLNIAVESAAALTYLHAIEPPIVHRDVKTTNILLDADFHVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLVELISSKPAVDITRQRNEINLAGMAINRIQKSQLEELVDLELGYESDPATKKMMTMVAELAFRCLQQNGEMRPPIKEVLEGLKGVQDLCVMEKDGGKDKKGPDPPLSPDTVHAQWDSRQTTPNTSQ |
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| Function | LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.2 [UniProtKB/Swiss-Prot:P0C5E2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0028990 | OsLiXu_01g0028990.01 | Chr01 | 30030700 | 30061030 | - | NAM | ||
| CDS seq | atgcctcctccgctcctcctcctcctcctccccgtcgtgctcgtcctcttcgccgacgccgatgcctccccctccgcctgccgcaacgccacctgcggcgacgttcccgtcgcctacccgttctggctgatcgacaactcatccaccttgggctgtggctaccccggcctcggcctccgctgcgtggacaacaccactctgattctccccttccggacacaccagtacagggtcctggacatcgagtacgggaagcacaccatctccctcaccgacgccgacatggcacaccccgacacaaacagcagctgcccgcacctacacgccaacctcaccatcgacgacaactcctggctgcagctcgcgtcctccgactccaacatcaccttcctctacaactgcaagagcaactcctccttgctgtcctcgacctccgccgtgaagctaactggatgtggagctggaccggagcacatcggtagttcgtacgtgttcctggatggctggatcacgggtgaagcgtacgattacgagtgcgagacggtggtggtggcgccggtgatcgatgcgcacaagaaggccatggtggacgcgcacgggggtcttcctcccgcggacggatcatttggcgaggtgctgagcgctgggttcgagctgacatacagcgctcactccgacaagtgcggcaaatgcgagcgaaccaagggGtggtgcggctaccggcacaacgagacgtccaccaccatggatttcacctgtttctgcgacgaaggcccgaccaagagccattgcggatcgaacccgaagataaaaattatagcaggtgtggttggcgggggattatctgcggtgttcgctcttggattaatagccaccgtcttcttcgttcgcaagagaaagcacaagaaggtgaactcatcttccaagctcctcaagtacagcggctccggcgggacacctcgctccatgggcggcgacatggagtccggcagtgtcaaggacctgcagactcacctcttcagctacgaggagctcgaggaggccaccgattccttcaacgagaacagagagctcggtgatggcggcttcggcaccgtctacaaagggatacttcgagacgggcgcgtggtggcggtgaagcggctgtacaacaacagctaccggcgggtggagcagttcgtgaacgaggcggcgatcctgtcgcggctgcggcacccgaacctggtgatgttctacgggtgcacgtcgagccagagcagggagctgctcctggtgtacgagttcgtggccaacggcacggtggccgaccacctgcacggccaccgcgcgcaggagcgcgcgctctcgtggccgctccgcctcaacatcgccgtcgagtcggccgccgcgctcacgtacctccacgccatcgagccacccatcgtgcaccgcgacgtcaagaccaccaacatcctcctcgacgccgacttccacgtcaaggtcgccgactttggcctctcccgcctcttccccctcgacgtcacgcacgtctccaccgctccccagggcaccccaggatacgtggatccggagtatcaccaatgctaccagcttaccgacaagagcgatgtgtacagcttcggcgtcgtcctggtggagctcatctcgtcgaagccggcggtggacatcacccggcagcggaacgagatcaacctggccggcatggccatcaacaggatccagaagagccagctcgaggagctcgtggacctcgagctcggctacgagtccgacccggcgacgaagaagatgatgaccatggtcgccgagctggctttccggtgcctgcagcagaacggcgagatgaggccgccgatcaaggaggtgctcgaggggctcaagggggtacaggacctatgcgtgatggagaaagatggaggcaaagacaagaagggacctgacccgccattatctcccgacacggtgcatgctcagtgggatagcaggcagacgactcctaacactagccagtga
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| Protein seq | MPPPLLLLLLPVVLVLFADADASPSACRNATCGDVPVAYPFWLIDNSSTLGCGYPGLGLRCVDNTTLILPFRTHQYRVLDIEYGKHTISLTDADMAHPDTNSSCPHLHANLTIDDNSWLQLASSDSNITFLYNCKSNSSLLSSTSAVKLTGCGAGPEHIGSSYVFLDGWITGEAYDYECETVVVAPVIDAHKKAMVDAHGGLPPADGSFGEVLSAGFELTYSAHSDKCGKCERTKGWCGYRHNETSTTMDFTCFCDEGPTKSHCGSNPKIKIIAGVVGGGLSAVFALGLIATVFFVRKRKHKKVNSSSKLLKYSGSGGTPRSMGGDMESGSVKDLQTHLFSYEELEEATDSFNENRELGDGGFGTVYKGILRDGRVVAVKRLYNNSYRRVEQFVNEAAILSRLRHPNLVMFYGCTSSQSRELLLVYEFVANGTVADHLHGHRAQERALSWPLRLNIAVESAAALTYLHAIEPPIVHRDVKTTNILLDADFHVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHQCYQLTDKSDVYSFGVVLVELISSKPAVDITRQRNEINLAGMAINRIQKSQLEELVDLELGYESDPATKKMMTMVAELAFRCLQQNGEMRPPIKEVLEGLKGVQDLCVMEKDGGKDKKGPDPPLSPDTVHAQWDSRQTTPNTSQ
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0028990 | OsLiXu_01g0028990.02 | Chr01 | 30030784 | 30036030 | - | IsoSeq | ||
| CDS seq | atgctaccagcttaccgacaagagcgatgtgtacagcttcggcgtcgtcctggtggagctcatctcgtcgaagccggcggtggacatcacccggcagcggaacgagatcaacctggccggcatggccatcaacaggatccagaagagccagctcgaggagctcgtggacctcgagctcggctacgagtccgacccggcgacgaagaagatgatgaccatggtcgccgagctggctttccggtgcctgcagcagaacggcgagatgaggccgccgatcaaggaggtgctcgaggggctcaagggggtacaggacctatgcgtgatggagaaagatggaggcaaagacaagaaggg
More
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| Protein seq | MLPAYRQERCVQLRRRPGGAHLVEAGGGHHPAAERDQPGRHGHQQDPEEPARGARGPRARLRVRPGDEEDDDHGRRAGFPVPAAERRDEAADQGGARGAQGGTGPMRDGERWRQRQEG |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| AF | Chr01 | 30032668 | 30061030 | - | OsLiXu_01g0028990.02 | OsLiXu_01g0028990.01,OsLiXu_01g0028990.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 3.220644 | 1.130993 | 5.344409 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0690200 | SBH | 0.269421 | 0.347245 | 0.880302 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g49560 | RBH | 0.000000 | 0.216516 | 0.025338 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0690200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0029770 | SBH | 0.298769 | 4.239184 | 5.291976 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0029360 | SBH | 0.307023 | 0.0 | 2.280102 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0029740 | RBH | 4.002054 | 5.486942 | 21.173508 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0028960 | RBH | 0.449745 | 0.255920 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0028680 | SBH | 6.758313 | 0.000000 | 4.838424 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0473000 | SBH | 7.9262455 | 23.30296 | 4.5420245 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0028390 | SBH | 0.000000 | 0.0 | 1.241875 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0462100 | SBH | 7.9808155 | 28.5183305 | 2.645286 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0028660 | RBH | 1.023462 | 0.534226 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0028540 | SBH | 2.147745 | 25.319962 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0028830 | RBH | 4.765199 | 4.223144 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_05g0025750 | SBH | 0.067618 | 0.350297 | 0.275000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0028800 | RBH | 0.838764 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G029260 | RBH | 0.407451 | 0.0 | 1.253664 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0028920 | RBH | 2.098474 | 5.345009 | 11.444468 |
