Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_01g0026500 | OGI:01080540 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:27854169-27884136 | ||||||||
| Gene Symbol | GELP18, OsGELP18, OsGELP18a, OsGELP18b, GELP19, OsGELP19, GELP20, OsGELP20, OsGELP20a, OsGELP20b, OsGELP20c, GELP21, OsGELP21, OsGELP21a, OsGELP21b, OsGELP21c | ||||||||||
| DNA seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcggtactctgctcgcggcgattttccgccccctcctcccctgcatcgattggtcgaccgatcgaacgacccaactaacctgagatttgaaatttgggtgcaccgcgccgcagcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggtatgttgatataatccctcctctctctctacccacctttgacgatgacattttcaactagcgatatgaaatcgtagcagtagactagtagtttggtGggggttaatgtcttgatgatgatgcgcatctggtgataaatagaatggtctgaatgtgacacatggagattggagaagcaaatcccAaacatgccacAaactgattagtagagtataagcacgcagactgacaggtactaaggcactgtctcaaccttttgtggctctcagaagacatggaaggtgggagttggctagaaagttgaagagAaaaaaaaaaaggaaaagtatgctatagcattttccttatggtgtggaacttatcctagtaccttctatgccatttcagaattggtgcaatggtatacaatatatattccttgattcctttttagtttttacttgtgctttaggacgttgacatggtttctaaagaatataactgcatcgaagtattttccacgatacactactaatgtcattttcacatattatatgtcacctgtggttacttggtttagacacAaaaaaatgtgcatccaaagaaaataacagcacaaggaaaataagaaaagcaattcatcattaccagAaatagtggggtttgtttgtggcttgaagattgacagcttttgttgattgctgctaggcagatggtccatttcaaaatccatAaccgtcattgtcaaacaccttaagtccataactgatactgtattttctatAaaaaggaaatattgtaaaaggagtcctcaaactttctgcagtttatatatatatatatatatatatatatataTaaaatcacaccgcgaatccataacacattgttttccaaagaatacatcatcattagttgaaattaaaaattataaaaaatattttataaatggacaccatgtcactgctacatatgaactttgcccttgaattgatggcatacaacataaatcagaaatcaattaatacgccaaggggaagatcatgctgctacaaatctggtttttagtagaaatgacaagtagtaagcttcctgtgatcctttaaatgtttaactatgatataataaataagcaattgtgatatgcttaaaattattttcagctataatatcatatttacatactgattctaaacactagttattgcacaggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgtgagtaacgtgcctatgttacatcttttctgtgtaccttgagaccctgtatcaagaagcaatacAaaattacatggcttgtaatgcaacagcgttgagtttgcaggaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggAaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggtgagttcagttaattcattactgtttctactatgatttcttttcgaaagcttaacactactaattttagtttttaggttacaagaaaaatactctatatgtgttctcttaaattcgattaccttagtgcttctcaaacgaagcaaatctgtctgtatccttcatatgtttgtaaggttcagaagtttattttcatcatgtcacgtaatgcacccccacgccagacctctgttcagatatctgcattcttatcatggtatatatatatattatgtgtattacaaattattgcattcttaccatggtatagatacattatgtgtattacaaattaacatgacatcacttgtactgagtttaagactgaactaactagtcggtttcactagaaaaactgtctagaagccttaatatggaggaaagcgcatattatcaagaaaaagaacatttttttcttctgagtatagcttgtttaacatttccctaacctcggttcaggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttgtaattctgtaactatattttttttattatatagacaatacgtgtgattaaaagatgtaacgattgtggtatttttgcctcattacagaactgcagaactgttctacacagaatggctgttgcccaagtgattggctggctcttgttattCcttctctgtttttagtcacgaccacaaggttttatttgtggatcgtttgattcttcgtaaatttttaagatttattatttcttatagggtatgtgtagtattattataatttagctccattgtttttcttctgtgtatagtgaaagggttaggggttacagggagacaactacattctttggtcaccttggctgcgtggctgatgtggccgtgatgtcgcttctcgtagaggcatttcttatgagcgatattgtataaagatcatgcaatccgatcgctttatctaatttttagtgagttccatgactcttatttgtatccacaatcatcagaagtgccatatagcttaaatAaaaaaactgtcagtgtcaaacatgtacgggatattgtttaaagaaatcgaaataacgaaaacacttcaaatattagataatataaaaagcacaactaccagtatatatcaatcaggtcaattatgttgcaacatcattaattcactaCctactctccttgcacctaacactcttaagagaagcgattatttacttaatactccctccgtcacaaaaaaacgtaagctagtaaggaataaaataatctagtacaacgaatatatggataattgtactagattatcctatttcatacaaggttgagtatattttatagaggaagtaaaaaaaatattgtcattgtcgttggactacacttattttcccatttctatctcgagtcttatcacctgaaccattttgtgatttgttgctgcaagcctcattatcgttcgataagttgtttcaccatggcagaatgcgaacgacGgggaaaaatattttcacttatgcttggttaaatatacatcgccgaaaaaaaaatcaatatatggatgtatcaaatcttttggtccaaagtaatgatatacaacaatctgtgtatctaaaagtgttaccttacgacttacgaaataaacgtacttgtaaacgcaactcaactggttagctttctcgtagtagaacgaagtccccttgattcaaatcctatacttgacatgagcatttgcatttacgggtaattattattttagcgatgagtgatatatagggatcaatgtgtacgtatcatgagcgcttagcatttatactacgttttcacagtgcatttagtggaggatggagcgtacctgtcaccgtctcatgtgtaataggctaacagcgaccagaggccctactgacctgtgggcattcgtcactcgagcccacttaacattaacgagccacgcttacgtttcttggagtatttgccttttttgggccaacgcgaaaaaacaccgcagagccaatcccagtggccgcttcgccttcgggcccgacgtcgagcagaagcaaacgaaagtgtaggaagaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttcggggactcgctggcggacacgggcaacgtcgctttcctctccggcaacgacctcgcagctgtggccaccctacggcgagaccttcttccaccgcgccaccggccggtgctccgacggccgcctcatcatcgacttcatcggtatgcctcatcatccatccatcctgcaggcctcgtctgcatcg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| CDS seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcgcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggAaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttaactgcagaactgttctacacagaatggctgttgcccaaaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttcggggactcgctggcggacacgggcaacctgtggccaccctacggcgagaccttcttccaccgcgccaccggccggtgctccgacggccgcctcatcatcgacttcatcggtatgcctcatcatccatccatcctgcaggcctcgtctgcatcgattgatcgctcgatccctgaagcaatggggctgccgttcctgcggccgtactggggagggcagaccgcgggggacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcggCccggacttcttccGggagagaggggtgcccacggacgacggtgtcgtgcacctcgagatggagatggggtggttccgcgatctgctcgacatgctctgcgccggcgacatggacggttgcaagggtatgatgaatcaatctctctttttggtcggagaaatcggaggcaatgattacaactatcctcttatgagcggcgtgcccattgaaaagattcgcagcttcactcctagtgttattgccaaaatttcttccacaatcaccgaattgatcggacttggagccaagacactagttgttcctggtaacctcccaattggatgtattccaacatacctcatgcaatttgagagtgataagaaggaagattatgagccagagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaactttttatagatgaattggaaaacttgcgcaagcttcaccccgatgtggccatcatctatactgattactatggagctgccatggaaatttttctttcccctgaacaatttggaattgaggatcctttggtcgcttgctgtggtggaggaggaccttatggtgtatctgcatctgcaggctgtggatatggtgaatacaaagtgtgtgatgacccatcaaagtatgcatcgtgggatggctttcatccatcagaagctgcatacaagggcattgcaattggcctgctacagggcccatacactcaacctccaatcgctagcatcaccgattcttgtctacagatcattggcctcggttcttctgctgaacgcaaggtcatctatgacatgatggtctcctctacttccggaggactctcgccgccggcggttgtgctggccgtggcggttgtgctgtcggcggcggcgtcacgggcgctggcggcgccgtgctacccgcgcgtgttctgcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggccctcgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgctcctccaacggccgcctcatcatcgacttcatcgctgaagcgatggggctgccgttcgtgcggccgtactggggcgggcagaccgcggggaacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcagcccggacttcttccgggagagaGgggtgcccatggacgacgacaccgtgcacctcgacatggagatggagtggttccgtgatctgctcggcatgctctgcaccggcggcgacatggacggttgcaagggcatgatgaatcaatctcttttcttggttggagaaatcggaggcaatgattacaaccttcctcttatgagcggcatgtccattgaaaagattcgcaacttcactcctagtgtcattgccaaaatttcttccataatcaccgaattgattggacttggggccaagacactagttgttcccggtaacatcccaattggatgtattccaatgtacctcatgcaatttgagagtgataagaaggaagattatgagccaaagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaacttcttgtagatgaattggaaaacttgcgcaagcttcatcttgatgtgaccatcatctatgccgattactatggagctgccatggaagttttcctttcccctgaacgatttggaattgaggatcctttggtcgcttgctgtggtggaagaggaccttatggtgtatctgcatctgtacgctgtggatatggcgaatacaaagtgtgtgatgacccagcaaaatatgcatcgtgggatggcttccatccatcagaagctgcatacaagggcattgcaattggcctgctacagggttcatacactcaacctccaattgttagcatcactaattcttgtccgcagataattggccttggttcctctgttgaacacaaggccatgtacgacttaggtaaccggcagatggccaccgagagaaagaatggcttcctctacctccgggagaagaggagagctgcggcggtggtgctggcggccgtggctgtgctgctctcggcgtcacaggcactggcggcgccgtgctatccgcgcgtgttcagcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggcccacgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgcgcctccaacggccgcctcatcatcgacttcattgatttggaaatcgcgcgcgttgcgctggccgcagctgacgcgctggggctgccattcgtgcggccgtactggagcgggcggaccgcgggggacttcgcccacggggccaacttcgcggtgggcggcgccacggcgctcagcccggatttctaccGggagagaggcgtgcacgtgcgcgacaccgtgcacctcgacatggagatgaactggttccgcgatctgctcggcctgctctgcccagacgatcttgccgattgcaacgacatgatgaatcaatctctgttcttagtcggagaaattggtggcaacgattacaaccatcctcttatctgtggggaattgatcaggcttggagccaagacgttagttgttcctggtaatctcccaattggatgtattccatactatctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggaattgagaatcctttggcagcttgctgtggtggaggaggaccttatggtgtatctgaaactgcaagatgtggacatggtgaatacaaggtgtgcgatgaccctcaactgtatgggtcatgggatgactatcatccatcagaagctgtgtttaaggccattgcaattggcctgctacggggttcatacacacaagctccactcgcgtgcccacaaattacagagctcggttcttctgttgaatacaaggtcctctatgatttgtag
More
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| Protein seq | MDSSSTSGRKGGGLLLSPPPAAVVVAVAVLLSAAEAATEEPCYPRLFSFGDSLTDTGNFAFIYGNDSREPALRPPYGETFFHRATGRFSDGRLVVDFIADALGLPFVRPYLSGRTAGDFACGANFAVGGATALSPAFFRARGVPMADIVHLDMEMKWFRDLLKLLCPGDLAGCTGMMNQSLFLVGEIGGNDYNLPLLSGVSITKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCVPNYLMIFKSGKKEDYEPETGCLRWMNEFSQYHNKLLIDELEKLRKLHPDVAIIYADYYGAAMEVFLSPEQFGIEDPLTACCGGGGPYGVSGTARCGYGEYKVCDDPQKFGSWDGFHPSEAAYKAIAIGLLRGSYTQPSFATTTNSCPQITELSSSVEYKVLYDLTAELFYTEWLLPKMVSSTSGGGAGLLSPPAVVLAVAVVLSAAAAAAQALAAPCYLRVFSFGDSLADTGNLWPPYGETFFHRATGRCSDGRLIIDFIGMPHHPSILQASSASIDRSIPEAMGLPFLRPYWGGQTAGDFASGANFAVGGATALGPDFFRERGVPTDDGVVHLEMEMGWFRDLLDMLCAGDMDGCKGMMNQSLFLVGEIGGNDYNYPLMSGVPIEKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCIPTYLMQFESDKKEDYEPEIGCLRWMNEFSQYHNKLFIDELENLRKLHPDVAIIYTDYYGAAMEIFLSPEQFGIEDPLVACCGGGGPYGVSASAGCGYGEYKVCDDPSKYASWDGFHPSEAAYKGIAIGLLQGPYTQPPIASITDSCLQIIGLGSSAERKVIYDMMVSSTSGGLSPPAVVLAVAVVLSAAASRALAAPCYPRVFCFGDSLTDTGNIAFLYGNDSRRPSLWPPYGETFFHRATGRSSNGRLIIDFIAEAMGLPFVRPYWGGQTAGNFASGANFAVGGATALSPDFFRERGVPMDDDTVHLDMEMEWFRDLLGMLCTGGDMDGCKGMMNQSLFLVGEIGGNDYNLPLMSGMSIEKIRNFTPSVIAKISSIITELIGLGAKTLVVPGNIPIGCIPMYLMQFESDKKEDYEPKIGCLRWMNEFSQYHNKLLVDELENLRKLHLDVTIIYADYYGAAMEVFLSPERFGIEDPLVACCGGRGPYGVSASVRCGYGEYKVCDDPAKYASWDGFHPSEAAYKGIAIGLLQGSYTQPPIVSITNSCPQIIGLGSSVEHKAMYDLGNRQMATERKNGFLYLREKRRAAAVVLAAVAVLLSASQALAAPCYPRVFSFGDSLTDTGNIAFLYGNDSRRPTLWPPYGETFFHRATGRASNGRLIIDFIDLEIARVALAAADALGLPFVRPYWSGRTAGDFAHGANFAVGGATALSPDFYRERGVHVRDTVHLDMEMNWFRDLLGLLCPDDLADCNDMMNQSLFLVGEIGGNDYNHPLICGELIRLGAKTLVVPGNLPIGCIPYYLMIFKSGKKEDYEPETGIENPLAACCGGGGPYGVSETARCGHGEYKVCDDPQLYGSWDDYHPSEAVFKAIAIGLLRGSYTQAPLACPQITELGSSVEYKVLYDL |
||||||||||
| Function | GDSL esterase/lipase At1g28600 [UniProtKB/Swiss-Prot:Q94F40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0026500 | OsLiXu_01g0026500.01 | Chr01 | 27854169 | 27884136 | + | NAM | ||
| CDS seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcgcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggAaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttaactgcagaactgttctacacagaatggctgttgcccaaaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttcggggactcgctggcggacacgggcaacctgtggccaccctacggcgagaccttcttccaccgcgccaccggccggtgctccgacggccgcctcatcatcgacttcatcggtatgcctcatcatccatccatcctgcaggcctcgtctgcatcgattgatcgctcgatccctgaagcaatggggctgccgttcctgcggccgtactggggagggcagaccgcgggggacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcggCccggacttcttccGggagagaggggtgcccacggacgacggtgtcgtgcacctcgagatggagatggggtggttccgcgatctgctcgacatgctctgcgccggcgacatggacggttgcaagggtatgatgaatcaatctctctttttggtcggagaaatcggaggcaatgattacaactatcctcttatgagcggcgtgcccattgaaaagattcgcagcttcactcctagtgttattgccaaaatttcttccacaatcaccgaattgatcggacttggagccaagacactagttgttcctggtaacctcccaattggatgtattccaacatacctcatgcaatttgagagtgataagaaggaagattatgagccagagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaactttttatagatgaattggaaaacttgcgcaagcttcaccccgatgtggccatcatctatactgattactatggagctgccatggaaatttttctttcccctgaacaatttggaattgaggatcctttggtcgcttgctgtggtggaggaggaccttatggtgtatctgcatctgcaggctgtggatatggtgaatacaaagtgtgtgatgacccatcaaagtatgcatcgtgggatggctttcatccatcagaagctgcatacaagggcattgcaattggcctgctacagggcccatacactcaacctccaatcgctagcatcaccgattcttgtctacagatcattggcctcggttcttctgctgaacgcaaggtcatctatgacatgatggtctcctctacttccggaggactctcgccgccggcggttgtgctggccgtggcggttgtgctgtcggcggcggcgtcacgggcgctggcggcgccgtgctacccgcgcgtgttctgcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggccctcgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgctcctccaacggccgcctcatcatcgacttcatcgctgaagcgatggggctgccgttcgtgcggccgtactggggcgggcagaccgcggggaacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcagcccggacttcttccgggagagaGgggtgcccatggacgacgacaccgtgcacctcgacatggagatggagtggttccgtgatctgctcggcatgctctgcaccggcggcgacatggacggttgcaagggcatgatgaatcaatctcttttcttggttggagaaatcggaggcaatgattacaaccttcctcttatgagcggcatgtccattgaaaagattcgcaacttcactcctagtgtcattgccaaaatttcttccataatcaccgaattgattggacttggggccaagacactagttgttcccggtaacatcccaattggatgtattccaatgtacctcatgcaatttgagagtgataagaaggaagattatgagccaaagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaacttcttgtagatgaattggaaaacttgcgcaagcttcatcttgatgtgaccatcatctatgccgattactatggagctgccatggaagttttcctttcccctgaacgatttggaattgaggatcctttggtcgcttgctgtggtggaagaggaccttatggtgtatctgcatctgtacgctgtggatatggcgaatacaaagtgtgtgatgacccagcaaaatatgcatcgtgggatggcttccatccatcagaagctgcatacaagggcattgcaattggcctgctacagggttcatacactcaacctccaattgttagcatcactaattcttgtccgcagataattggccttggttcctctgttgaacacaaggccatgtacgacttaggtaaccggcagatggccaccgagagaaagaatggcttcctctacctccgggagaagaggagagctgcggcggtggtgctggcggccgtggctgtgctgctctcggcgtcacaggcactggcggcgccgtgctatccgcgcgtgttcagcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggcccacgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgcgcctccaacggccgcctcatcatcgacttcattgatttggaaatcgcgcgcgttgcgctggccgcagctgacgcgctggggctgccattcgtgcggccgtactggagcgggcggaccgcgggggacttcgcccacggggccaacttcgcggtgggcggcgccacggcgctcagcccggatttctaccGggagagaggcgtgcacgtgcgcgacaccgtgcacctcgacatggagatgaactggttccgcgatctgctcggcctgctctgcccagacgatcttgccgattgcaacgacatgatgaatcaatctctgttcttagtcggagaaattggtggcaacgattacaaccatcctcttatctgtggggaattgatcaggcttggagccaagacgttagttgttcctggtaatctcccaattggatgtattccatactatctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggaattgagaatcctttggcagcttgctgtggtggaggaggaccttatggtgtatctgaaactgcaagatgtggacatggtgaatacaaggtgtgcgatgaccctcaactgtatgggtcatgggatgactatcatccatcagaagctgtgtttaaggccattgcaattggcctgctacggggttcatacacacaagctccactcgcgtgcccacaaattacagagctcggttcttctgttgaatacaaggtcctctatgatttgtag
More
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| Protein seq | MDSSSTSGRKGGGLLLSPPPAAVVVAVAVLLSAAEAATEEPCYPRLFSFGDSLTDTGNFAFIYGNDSREPALRPPYGETFFHRATGRFSDGRLVVDFIADALGLPFVRPYLSGRTAGDFACGANFAVGGATALSPAFFRARGVPMADIVHLDMEMKWFRDLLKLLCPGDLAGCTGMMNQSLFLVGEIGGNDYNLPLLSGVSITKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCVPNYLMIFKSGKKEDYEPETGCLRWMNEFSQYHNKLLIDELEKLRKLHPDVAIIYADYYGAAMEVFLSPEQFGIEDPLTACCGGGGPYGVSGTARCGYGEYKVCDDPQKFGSWDGFHPSEAAYKAIAIGLLRGSYTQPSFATTTNSCPQITELSSSVEYKVLYDLTAELFYTEWLLPKMVSSTSGGGAGLLSPPAVVLAVAVVLSAAAAAAQALAAPCYLRVFSFGDSLADTGNLWPPYGETFFHRATGRCSDGRLIIDFIGMPHHPSILQASSASIDRSIPEAMGLPFLRPYWGGQTAGDFASGANFAVGGATALGPDFFRERGVPTDDGVVHLEMEMGWFRDLLDMLCAGDMDGCKGMMNQSLFLVGEIGGNDYNYPLMSGVPIEKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCIPTYLMQFESDKKEDYEPEIGCLRWMNEFSQYHNKLFIDELENLRKLHPDVAIIYTDYYGAAMEIFLSPEQFGIEDPLVACCGGGGPYGVSASAGCGYGEYKVCDDPSKYASWDGFHPSEAAYKGIAIGLLQGPYTQPPIASITDSCLQIIGLGSSAERKVIYDMMVSSTSGGLSPPAVVLAVAVVLSAAASRALAAPCYPRVFCFGDSLTDTGNIAFLYGNDSRRPSLWPPYGETFFHRATGRSSNGRLIIDFIAEAMGLPFVRPYWGGQTAGNFASGANFAVGGATALSPDFFRERGVPMDDDTVHLDMEMEWFRDLLGMLCTGGDMDGCKGMMNQSLFLVGEIGGNDYNLPLMSGMSIEKIRNFTPSVIAKISSIITELIGLGAKTLVVPGNIPIGCIPMYLMQFESDKKEDYEPKIGCLRWMNEFSQYHNKLLVDELENLRKLHLDVTIIYADYYGAAMEVFLSPERFGIEDPLVACCGGRGPYGVSASVRCGYGEYKVCDDPAKYASWDGFHPSEAAYKGIAIGLLQGSYTQPPIVSITNSCPQIIGLGSSVEHKAMYDLGNRQMATERKNGFLYLREKRRAAAVVLAAVAVLLSASQALAAPCYPRVFSFGDSLTDTGNIAFLYGNDSRRPTLWPPYGETFFHRATGRASNGRLIIDFIDLEIARVALAAADALGLPFVRPYWSGRTAGDFAHGANFAVGGATALSPDFYRERGVHVRDTVHLDMEMNWFRDLLGLLCPDDLADCNDMMNQSLFLVGEIGGNDYNHPLICGELIRLGAKTLVVPGNLPIGCIPYYLMIFKSGKKEDYEPETGIENPLAACCGGGGPYGVSETARCGHGEYKVCDDPQLYGSWDDYHPSEAVFKAIAIGLLRGSYTQAPLACPQITELGSSVEYKVLYDL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0026500 | OsLiXu_01g0026500.02 | Chr01 | 27857271 | 27857416 | + | IsoSeq | ||
| CDS seq | acaaggtcctctacgatttgtaattctgtaactatattttttttattatatagacaatac |
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| Protein seq | TRSSTICNSVTIFFLLYRQY |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.617375 | 1.078523 | 1.113019 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0649400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g46120 | RBH | 0.000000 | 0.353778 | 0.213710 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0649400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0027360 | RBH | 0.0 | 0.0 | 1.586856 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0026840 | RBH | 0.259659 | 0.0 | 1.883463 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0027280 | RBH | 2.658433 | 63.496506 | 4.767119 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0026520 | RBH | 0.043311 | 0.177659 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0026290 | RBH | 3.381404 | 0.000000 | 7.553514 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0440200 | RBH | 0 | 0.1429665 | 0.0246645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0025960 | RBH | 0.0 | 0.000000 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0429400 | RBH | 2.9684775 | 18.6802625 | 0.033515 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0026210 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0026140 | RBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0026470 | RBH | 0.000000 | 19.097023 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0026520 | RBH | 0.451044 | 0.267637 | 0.974783 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0026340 | RBH | 0.542584 | 2.516270 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G026720 | RBH | 0.280848 | 0.000000 | 0.649896 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0026470 | RBH | 0.277112 | 18.012470 | 5.902811 |
