Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsCMeo_01g0027280 | OGI:01080540 | 16/16 | CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | Chr01:27285815-27315971 | ||||||||
| Gene Symbol | GELP18, OsGELP18, OsGELP18a, OsGELP18b, GELP19, OsGELP19, GELP20, OsGELP20, OsGELP20a, OsGELP20b, OsGELP20c, GELP21, OsGELP21, OsGELP21a, OsGELP21b, OsGELP21c | ||||||||||
| DNA seq | tctctccttttctccgttcatctcgagcagaggagaggaatggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcggtactctgctcgcggcgattttccgccccctcctcccctgcatcgattggtcgaccgatcgaacgacccgactaacctgagatttgaaatttgggtgcaccgcgccgcagcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggtatgttgatataatccctcctctctctctacccacctttgacgatgacattttcaactagcgatatgaaatcgtagcagtagactagtagtttggtgggggttaatgtcttgatgatgatgcgcatctggtgataaatagaatggtctgaatgtgacacatggagattggagaagcaaatcccaaacatgccacaaactgattagtagagtataagcacgcagactgacaggtactaaggcactgtctcaaccttttgtggctctcagaagacatggaaggtgggagttggctagaaagttgaagagaaaaaaaaaaaggaaaagtatgctatagcattttccttatggtgtggaacttatcctagtaccttctatgccatttcagaattggtgcaatggtatacaatatatattccttgattcctttttagtttttacttgtgctttaggacgttgacatggtttctaaagaatataactgcatcgaagtattttccacgatacactactaatgtcattttcacatattatatgtcacctgtggttacttggtttagacacAaaaaaatgtgcatccaaagaaaataacagcacaaggaaaataagaaaagcaattcatcattaccagaaatagtggggtttgtttgtggcttgaagattgacagcttttgttgattgctgctaggcagatggtccatttcaaaatccataaccgtcattgtcaaacaccttaagtccataactgatactgtattttctataaaaaggaaatattgtaaaaggagtcctcaaactttctgcagtttatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataaaatcacaccgcgaatccataacacattgttttccaaagaatacatcatcattagttgaaattaaaaattataaaaaatattttataaatggacaccatgtcactgctacatatgaactttgcccttgaattgatggcatacaacataaatcagaaatcaattaatacgccaaggggaagatcatgctgctacaaatctggtttttagtagaaatgacaagtagtaagcttcctgtgatcctttaaatgtttaactatgatataataaataagcaattgtgatatgcttaaaattattttcagctataatatcatatttacatactgattctaaacactagttattgcacaggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgtgagtaacgtgcctatgttacatcttttctgtgtaccttgagaccctgtatcaagaagcaatacaaaattacatggcttgtaatgcaacagcgttgagtttgcaggaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggaaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggtgagttcagttaattcattactgtttctactatgatttcttttcgaaagcttaacactactaattttagtttttaggttacaagaaaaatactctatatgtgttctcttaaattcgattaccttagtgcttctcaaacgaagcaaatctgtctgtatccttcatatgtttgtaaggttcagaagtttattttcatcatgtcacgtaatgcacccccacgccagacctctgttcagatatctgcattcttatcatggtatatatatatattatgtgtattacaaattattgcattcttaccatggtatagatacattatgtgtattacaaattaacatgacatcacttgtactgagtttaagactgaactaactagtcggtttcactagaaaaactgtctagaagccttaatatggaggaaagcgcatattatcaagaaaaagaacatttttttcttctgagtatagcttgtttaacatttccctaacctcggttcaggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttgtaattctgtaactatattttttttattatatagacaatacgtgtgattaaaagatgtaacgattgtggtatttttgcctcattacagaactgcagaactgttctacacagaatggctgttgcccaagtgattggctggctcttgttattccttctctgtttttagtcacgaccacaaggttttatttgtggatcgtttgattcttcgtaaatttttaagatttattatttcttatagggtatgtgtagtattattataatttagctccattgtttttcttctgtgtatagtgaaagggttaggggttacagggagacaactacattctttggtcaccttggctgcgtggctgatgtggccgtgatgtcgcttctcgtagaggcatttcttatgagcgatattgtataaagatcatgcaatccgatcgctttatctaatttttagtgagttccatgactcttatttgtatccacaatcatcagaagtgccatatagcttaaataaaaaaactgtcagtgtcaaacatgtacgggatattgtttaaagaaatcgaaataacgaaaacacttcaaatattagataatataaaaagcacaactaccagtatatatcaatcaggtcaattatgttgcaacatcattaattcactacctactctccttgcacctaacactcttaagagaagcgattatttacttaatactccctccgtcacaaaaaacgtaagctagtaaggaataaaataatctagtacaacgaatatatggataattgtactagattatcctatttcatacaaggttgagtatattttatagaggaagtaaaaaaaatattgtcattgtcgttggactacacttattttcccatttctatctcgagtcttatcacctgaaccattttgtgatttgttgctgcaagcctcattatcgttcgataagttgtttcaccatggcagaatgcgaacgacggggaaaaatattttcacttatgcttggttaaatatacatcgccgaaaaaaaaatcaatatatggatgtatcaaatcttttggtccaaagtaatgatatacaacaatctgtgtatctaaaagtgttaccttacgacttacgaaataaacgtacttgtaaacgcaactcaactggttagctttctcgtagtagaacgaagtccccttgattcaaatcctatacttgacatgagcatttgcatttacgggtaattattattttagcgatgagtgatatatagggatcaatgtgtacgtatcatgagcgcttagcatttatactacgttttcacagtgcatttagtggaggatggagcgtacctgtcaccgtctcatgtgtaataggctaacagcgaccagaggccctactgacctgtgggcattcgtcactcgagcccacttaacattaacgagccacgcttacgtttcttggagtatttgccttttttgggccaacgcgaaaaaacaccgcagagccaatcccagtggccgcttcgccttcgggcccgacgtcgagcagaagcaaacgaaagtgtaggaagaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttc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tgggatgactatcatccatcagaagctgtgtttaaggccattgcaattggcctgctacggggttcatacacacaagctccactcgcgtgcccacaaattacagagctcggttcttctgttgaatacaaggtcctctatgatttgtagttgtgactat
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| CDS seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcgcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggaaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttaactgcagaactgttctacacagaatggctgttgcccaaaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttcggggactcgctggcggacacgggcaacctgtggccaccctacggcgagaccttcttccaccgcgccaccggccggtgctccgacggccgcctcatcatcgacttcatcggtatgcctcatcatccatccatcctgcaggcctcgtctgcatcgattgatcgctcgatccctgaagcaatggggctgccgttcctgcggccgtactggggagggcagaccgcgggggacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcggcccggacttcttccgggagagaggggtgcccacggacgacggtgtcgtgcacctcgagatggagatggggtggttccgcgatctgctcgacatgctctgcgccggcgacatggacggttgcaagggtatgatgaatcaatctctctttttggtcggagaaatcggaggcaatgattacaactatcctcttatgagcggcgtgcccattgaaaagattcgcagcttcactcctagtgttattgccaaaatttcttccacaatcaccgaattgatcggacttggagccaagacactagttgttcctggtaacctcccaattggatgtattccaacatacctcatgcaatttgagagtgataagaaggaagattatgagccagagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaactttttatagatgaattggaaaacttgcgcaagcttcaccccgatgtggccatcatctatactgattactatggagctgccatggaaatttttctttcccctgaacaatttggaattgaggatcctttggtcgcttgctgtggtggaggaggaccttatggtgtatctgcatctgcaggctgtggatatggtgaatacaaagtgtgtgatgacccatcaaagtatgcatcgtgggatggctttcatccatcagaagctgcatacaagggcattgcaattggcctgctacagggcccatacactcaacctccaatcgctagcatcaccgattcttgtctacagatcattggcctcggttcttctgctgaacgcaaggtcatctatgacattggcggcttcgccttcgtgcccgacgaccacctcgagcagaaggaaacgaaagtgtag
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| Protein seq | MDSSSTSGRKGGGLLLSPPPAAVVVAVAVLLSAAEAATEEPCYPRLFSFGDSLTDTGNFAFIYGNDSREPALRPPYGETFFHRATGRFSDGRLVVDFIADALGLPFVRPYLSGRTAGDFACGANFAVGGATALSPAFFRARGVPMADIVHLDMEMKWFRDLLKLLCPGDLAGCTGMMNQSLFLVGEIGGNDYNLPLLSGVSITKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCVPNYLMIFKSGKKEDYEPETGCLRWMNEFSQYHNKLLIDELEKLRKLHPDVAIIYADYYGAAMEVFLSPEQFGIEDPLTACCGGGGPYGVSGTARCGYGEYKVCDDPQKFGSWDGFHPSEAAYKAIAIGLLRGSYTQPSFATTTNSCPQITELSSSVEYKVLYDLTAELFYTEWLLPKMVSSTSGGGAGLLSPPAVVLAVAVVLSAAAAAAQALAAPCYLRVFSFGDSLADTGNLWPPYGETFFHRATGRCSDGRLIIDFIGMPHHPSILQASSASIDRSIPEAMGLPFLRPYWGGQTAGDFASGANFAVGGATALGPDFFRERGVPTDDGVVHLEMEMGWFRDLLDMLCAGDMDGCKGMMNQSLFLVGEIGGNDYNYPLMSGVPIEKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCIPTYLMQFESDKKEDYEPEIGCLRWMNEFSQYHNKLFIDELENLRKLHPDVAIIYTDYYGAAMEIFLSPEQFGIEDPLVACCGGGGPYGVSASAGCGYGEYKVCDDPSKYASWDGFHPSEAAYKGIAIGLLQGPYTQPPIASITDSCLQIIGLGSSAERKVIYDIGGFAFVPDDHLEQKETKV |
||||||||||
| Function | GDSL esterase/lipase At1g28600 [UniProtKB/Swiss-Prot:Q94F40] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0027280 | OsCMeo_01g0027280.01 | Chr01 | 27285815 | 27289580 | + | NAM | ||
| CDS seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcgcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggaaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttgtaa
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| Protein seq | MDSSSTSGRKGGGLLLSPPPAAVVVAVAVLLSAAEAATEEPCYPRLFSFGDSLTDTGNFAFIYGNDSREPALRPPYGETFFHRATGRFSDGRLVVDFIADALGLPFVRPYLSGRTAGDFACGANFAVGGATALSPAFFRARGVPMADIVHLDMEMKWFRDLLKLLCPGDLAGCTGMMNQSLFLVGEIGGNDYNLPLLSGVSITKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCVPNYLMIFKSGKKEDYEPETGCLRWMNEFSQYHNKLLIDELEKLRKLHPDVAIIYADYYGAAMEVFLSPEQFGIEDPLTACCGGGGPYGVSGTARCGYGEYKVCDDPQKFGSWDGFHPSEAAYKAIAIGLLRGSYTQPSFATTTNSCPQITELSSSVEYKVLYDL
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0027280 | OsCMeo_01g0027280.03 | Chr01 | 27300624 | 27315971 | + | NAM | ||
| CDS seq | atggtctcctctacttccggaggactctcgccgccggcggttgtgctggccgtggcggttgtgctgtcggcggcggcgtcacgggcgctggcggcgccgtgctacccgcgcgtgttctgcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggccctcgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgctcctccaacggccgcctcatcatcgacttcatcgctgaagcgatggggctgccgttcgtgcggccgtactggggcgggcagaccgcggggaacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcagcccggacttcttccgggagagaggggtgcccatggacgacgacaccgtgcacctcgacatggagatggagtggttccgtgatctgctcggcatgctctgcaccggcggcgacatggacggttgcaagggcatgatgaatcaatctcttttcttggttggagaaatcggaggcaatgattacaaccttcctcttatgagcggcatgtccattgaaaagattcgcaacttcactcctagtgtcattgccaaaaattcttccataatcaccgaattgattggacttggggccaagacactagttgttcccggtaacatcccaattggatgtattccaatgtacctcatgcaatttgagagtgataagaaggaagattatgagccaaagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaacttcttgtagatgaattggaaaacttgcgcaagcttcatcttgatgtgaccatcatctatgccgattactatggagctgccatggaagttttcctttcccctgaacgatttggaattgaggatcctttggtcgcttgctgtggtggaagaggaccttatggtgtatctgcatctgtacgctgtggatatggcgaatacaaagtgtgtgatgacccagcaaaatatgcatcgtgggatggcttccatccatcagaagctgcatacaagggcattgcaattggcctgctacagggttcatacactcaacctccaattgttagcatcactaattcttgtccgcagataattggccttgctgacgcgctggggctgccattcgtgcggccgtactggagcgggcggaccgcgggggacttcgcccacggggccaacttcgcggtgggcggcgccacggcgctcagcccggatttctaccgggagagaggcgtgcacgtgcgcgacaccgtgcacctcgacatggagatgaactggttccgcgatctgctcggcctgctctgcccagacgatcttgccgattgcaacgacatgatgaatcaatctctgttcttagtcggagaaattggtggcaacgattacaaccatcctcttatctgtggggtatccattagaaagattcgcagcttcactccgagtgaattgatcaggcttggagccaagacgttagttgttcctggtaatctcccaattggatgtattccatactatctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgggttctcgcaataccacaacaaacttcttatggatgaactggaaaatttacggaagcttcatcctgataatcctttggcagcttgctgtggtggaggaggaccttatggtgtatctgaaactgcaagatgtggacatggtgaatacaaggtgtgcgatgaccctcaactgtatgggtcatgggatgactatcatccatcagaagctgtgtttaaggccattgcaattggcctgctacggggttcatacacacaagctccactcgcgtgcccacaaattacagagctcggttcttctgttgaatacaaggtcctctatgatttgtag
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| Protein seq | MVSSTSGGLSPPAVVLAVAVVLSAAASRALAAPCYPRVFCFGDSLTDTGNIAFLYGNDSRRPSLWPPYGETFFHRATGRSSNGRLIIDFIAEAMGLPFVRPYWGGQTAGNFASGANFAVGGATALSPDFFRERGVPMDDDTVHLDMEMEWFRDLLGMLCTGGDMDGCKGMMNQSLFLVGEIGGNDYNLPLMSGMSIEKIRNFTPSVIAKNSSIITELIGLGAKTLVVPGNIPIGCIPMYLMQFESDKKEDYEPKIGCLRWMNEFSQYHNKLLVDELENLRKLHLDVTIIYADYYGAAMEVFLSPERFGIEDPLVACCGGRGPYGVSASVRCGYGEYKVCDDPAKYASWDGFHPSEAAYKGIAIGLLQGSYTQPPIVSITNSCPQIIGLADALGLPFVRPYWSGRTAGDFAHGANFAVGGATALSPDFYRERGVHVRDTVHLDMEMNWFRDLLGLLCPDDLADCNDMMNQSLFLVGEIGGNDYNHPLICGVSIRKIRSFTPSELIRLGAKTLVVPGNLPIGCIPYYLMIFKSGKKEDYEPETGCLRWMNGFSQYHNKLLMDELENLRKLHPDNPLAACCGGGGPYGVSETARCGHGEYKVCDDPQLYGSWDDYHPSEAVFKAIAIGLLRGSYTQAPLACPQITELGSSVEYKVLYDL
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0027280 | OsCMeo_01g0027280.04 | Chr01 | 27300624 | 27315971 | + | NAM | ||
| CDS seq | atggtctcctctacttccggaggactctcgccgccggcggttgtgctggccgtggcggttgtgctgtcggcggcggcgtcacgggcgctggcggcgccgtgctacccgcgcgtgttctgcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggccctcgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgctcctccaacggccgcctcatcatcgacttcatcgctgaagcgatggggctgccgttcgtgcggccgtactggggcgggcagaccgcggggaacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcagcccggacttcttccgggagagaggggtgcccatggacgacgacaccgtgcacctcgacatggagatggagtggttccgtgatctgctcggcatgctctgcaccggcggcgacatggacggttgcaagggcatgatgaatcaatctcttttcttggttggagaaatcggaggcaatgattacaaccttcctcttatgagcggcatgtccattgaaaagattcgcaacttcactcctagaattgaggatcctttggtcgcttgctgtggtggaagaggaccttatggtgtatctgcatctgtacgctgtggatatggcgaatacaaagtgtgtgatgacccagcaaaatatgcatcgtgggatggcttccatccatcagaagctgcatacaagggcattgcaattggcctgctacagggttcatacactcaacctccaattgttagcatcactaattcttgtccgcagataattggccttgctgacgcgctggggctgccattcgtgcggccgtactggagcgggcggaccgcgggggacttcgcccacggggccaacttcgcggtgggcggcgccacggcgctcagcccggatttctaccgggagagaggcgtgcacgtgcgcgacaccgtgcacctcgacatggagatgaactggttccgcgatctgctcggcctgctctgcccagacgatcttgccgattgcaacgacatgatgaatcaatctctgttcttagtcggagaaattggtggcaacgattacaaccatcctcttatctgtggggtatccattagaaagattcgcagcttcactccgagtgaattgatcaggcttggagccaagacgttagttgttcctggtaatctcccaattggatgtattccatactatctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgggttctcgcaataccacaacaaacttcttatggatgaactggaaaatttacggaagcttcatcctgataatcctttggcagcttgctgtggtggaggaggaccttatggtgtatctgaaactgcaagatgtggacatggtgaatacaaggtgtgcgatgaccctcaactgtatgggtcatgggatgactatcatccatcagaagctgtgtttaaggccattgcaattggcctgctacggggttcatacacacaagctccactcgcgtgcccacaaattacagagctcggttcttctgttgaatacaaggtcctctatgatttgtag
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| Protein seq | MVSSTSGGLSPPAVVLAVAVVLSAAASRALAAPCYPRVFCFGDSLTDTGNIAFLYGNDSRRPSLWPPYGETFFHRATGRSSNGRLIIDFIAEAMGLPFVRPYWGGQTAGNFASGANFAVGGATALSPDFFRERGVPMDDDTVHLDMEMEWFRDLLGMLCTGGDMDGCKGMMNQSLFLVGEIGGNDYNLPLMSGMSIEKIRNFTPRIEDPLVACCGGRGPYGVSASVRCGYGEYKVCDDPAKYASWDGFHPSEAAYKGIAIGLLQGSYTQPPIVSITNSCPQIIGLADALGLPFVRPYWSGRTAGDFAHGANFAVGGATALSPDFYRERGVHVRDTVHLDMEMNWFRDLLGLLCPDDLADCNDMMNQSLFLVGEIGGNDYNHPLICGVSIRKIRSFTPSELIRLGAKTLVVPGNLPIGCIPYYLMIFKSGKKEDYEPETGCLRWMNGFSQYHNKLLMDELENLRKLHPDNPLAACCGGGGPYGVSETARCGHGEYKVCDDPQLYGSWDDYHPSEAVFKAIAIGLLRGSYTQAPLACPQITELGSSVEYKVLYDL
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0027280 | OsCMeo_01g0027280.06 | Chr01 | 27301051 | 27303125 | + | NAM | ||
| CDS seq | atggggctgccgttcgtgcggccgtactggggcgggcagaccgcggggaacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcagcccggacttcttccgggagagaggggtgcccatggacgacgacaccgtgcacctcgacatggagatggagtggttccgtgatctgctcggcatgctctgcaccggcggcgacatggacggttgcaagggcatgatgaatcaatctcttttcttggttggagaaatcggaggcaatgattacaaccttcctcttatgagcggcatgtccattgaaaagattcgcaacttcactcctagtgtcattgccaaaaattcttccataatcaccgaattgattggacttggggccaagacactagttgttcccggtaacatcccaattggatgtattccaatgtacctcatgcaatttgagagtgataagaaggaagattatgagccaaagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaacttcttgtagatgaattggaaaacttgcgcaagcttcatcttgatgtgaccatcatctatgccgattactatggagctgccatggaagttttcctttcccctgaacgatttggaattgaggatcctttggtcgcttgctgtggtggaagaggaccttatggtgtatctgcatctgtacgctgtggatatggcgaatacaaagtgtgtgatgacccagcaaaatatgcatcgtgggatggcttccatccatcagaagctgcatacaagggcattgcaattggcctgctacagggttcatacactcaacctccaattgttagcatcactaattcttgtccgcagataattggccttggttcctctgttgaacacaaggccatgtacgacttgtaa
More
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| Protein seq | MGLPFVRPYWGGQTAGNFASGANFAVGGATALSPDFFRERGVPMDDDTVHLDMEMEWFRDLLGMLCTGGDMDGCKGMMNQSLFLVGEIGGNDYNLPLMSGMSIEKIRNFTPSVIAKNSSIITELIGLGAKTLVVPGNIPIGCIPMYLMQFESDKKEDYEPKIGCLRWMNEFSQYHNKLLVDELENLRKLHLDVTIIYADYYGAAMEVFLSPERFGIEDPLVACCGGRGPYGVSASVRCGYGEYKVCDDPAKYASWDGFHPSEAAYKGIAIGLLQGSYTQPPIVSITNSCPQIIGLGSSVEHKAMYDL
More
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0027280 | OsCMeo_01g0027280.02 | Chr01 | 27285854 | 27309215 | + | NAM | ||
| CDS seq | atggattcctcctccacctccgggaggaagggaggaggactcctcctctcgccgccgccggcggcggtagttgtggcggtggcggtgctcctgtcggcggcagaggcggcgacggaggagccgtgctacccgcggctgttcagctttggggactcgctgacggacacgggcaacttcgccttcatctacggcaacgactcccgcgagccggcgctccgcccgccctacggcgagaccttcttccaccgcgccaccggaagattctccgacggccgcctcgtcgtcgatttcatcgcggacgcgctggggctgccgttcgtgcggccgtacttgagcgggcggaccgcgggggacttcgcatgcggggccaacttcgcggtgggcggcgccacggcgctcagcccggccttcttccgggcgagaggggtgcccatggctgacatcgtgcacctcgacatggagatgaagtggtttcgtgatctgctgaaactgctctgccccggcgacctggccggttgcacgggcatgatgaatcaatctcttttcctggtcggagaaattgggggcaatgattacaacctacctcttctcagcggggtgtccattacaaagattcgcagcttcactccgagtgtcattgccaaaatttcttctacaatcaccgaattgattgggcttggagccaagacgctggttgttcctggtaacctccccattggatgtgttccaaattacctcatgatattcaagagtggtaagaaggaagattatgagccagagacaggttgcctcaggtggatgaacgagttctcgcaataccacaacaaacttcttatagatgaattggaaaagttacgcaagcttcatcctgatgtggccatcatctatgctgattactatggagctgccatggaagttttcctttcccctgaacaatttggaatcgaagatcctttgacagcttgttgtggtggaggaggaccgtatggtgtatctggaactgcaagatgtggatatggtgaatacaaggtttgcgatgacccacaaaagtttgggtcatgggatggcttccatccatcagaagctgcatacaaggccattgcaattggactgctacgaggttcatatacacaaccttcatttgctaccaccactaattcgtgcccgcaaattactgagctcagttcttctgttgaatacaaggtcctctacgatttaactgcagaactgttctacacagaatggctgttgcccaaaatggtctcctccacttccggaggaggagcaggcctcctctcgccgccggcggtagtgctggcggtggcagttgtgctgtcggcggcggcggcggcggcacaggcgctggcggcgccgtgctacctgcgcgtgttcagcttcggggactcgctggcggacacgggcaacctgtggccaccctacggcgagaccttcttccaccgcgccaccggccggtgctccgacggccgcctcatcatcgacttcatcggtatgcctcatcatccatccatcctgcaggcctcgtctgcatcgattgatcgctcgatccctgaagcaatggggctgccgttcctgcggccgtactggggagggcagaccgcgggggacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcggcccggacttcttccgggagagaggggtgcccacggacgacggtgtcgtgcacctcgagatggagatggggtggttccgcgatctgctcgacatgctctgcgccggcgacatggacggttgcaagggtatgatgaatcaatctctctttttggtcggagaaatcggaggcaatgattacaactatcctcttatgagcggcgtgcccattgaaaagattcgcagcttcactcctagtgttattgccaaaatttcttccacaatcaccgaattgatcggacttggagccaagacactagttgttcctggtaacctcccaattggatgtattccaacatacctcatgcaatttgagagtgataagaaggaagattatgagccagagataggttgccttaggtggatgaatgagttctcgcaataccacaacaaactttttatagatgaattggaaaacttgcgcaagcttcaccccgatgtggccatcatctatactgattactatggagctgccatggaaatttttctttcccctgaacaatttggaattgaggatcctttggtcgcttgctgtggtggaggaggaccttatggtgtatctgcatctgcaggctgtggatatggtgaatacaaagtgtgtgatgacccatcaaagtatgcatcgtgggatggctttcatccatcagaagctgcatacaagggcattgcaattggcctgctacagggcccatacactcaacctccaatcgctagcatcaccgattcttgtctacagatcattggcctcggttcttctgctgaacgcaaggtcatctatgacattggcggcttcgccttcgtgcccgacgaccacctcgagcagaaggaaacgaaagtgtag
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| Protein seq | MDSSSTSGRKGGGLLLSPPPAAVVVAVAVLLSAAEAATEEPCYPRLFSFGDSLTDTGNFAFIYGNDSREPALRPPYGETFFHRATGRFSDGRLVVDFIADALGLPFVRPYLSGRTAGDFACGANFAVGGATALSPAFFRARGVPMADIVHLDMEMKWFRDLLKLLCPGDLAGCTGMMNQSLFLVGEIGGNDYNLPLLSGVSITKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCVPNYLMIFKSGKKEDYEPETGCLRWMNEFSQYHNKLLIDELEKLRKLHPDVAIIYADYYGAAMEVFLSPEQFGIEDPLTACCGGGGPYGVSGTARCGYGEYKVCDDPQKFGSWDGFHPSEAAYKAIAIGLLRGSYTQPSFATTTNSCPQITELSSSVEYKVLYDLTAELFYTEWLLPKMVSSTSGGGAGLLSPPAVVLAVAVVLSAAAAAAQALAAPCYLRVFSFGDSLADTGNLWPPYGETFFHRATGRCSDGRLIIDFIGMPHHPSILQASSASIDRSIPEAMGLPFLRPYWGGQTAGDFASGANFAVGGATALGPDFFRERGVPTDDGVVHLEMEMGWFRDLLDMLCAGDMDGCKGMMNQSLFLVGEIGGNDYNYPLMSGVPIEKIRSFTPSVIAKISSTITELIGLGAKTLVVPGNLPIGCIPTYLMQFESDKKEDYEPEIGCLRWMNEFSQYHNKLFIDELENLRKLHPDVAIIYTDYYGAAMEIFLSPEQFGIEDPLVACCGGGGPYGVSASAGCGYGEYKVCDDPSKYASWDGFHPSEAAYKGIAIGLLQGPYTQPPIASITDSCLQIIGLGSSAERKVIYDIGGFAFVPDDHLEQKETKV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0027280 | OsCMeo_01g0027280.05 | Chr01 | 27300626 | 27303082 | + | NAM | ||
| CDS seq | atggtctcctctacttccggaggactctcgccgccggcggttgtgctggccgtggcggttgtgctgtcggcggcggcgtcacgggcgctggcggcgccgtgctacccgcgcgtgttctgcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggccctcgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgctcctccaacggccgcctcatcatcgacttcatcgctgaagcgatggggctgccgttcgtgcggccgtactggggcgggcagaccgcggggaacttcgccagcggggccaacttcgcggtgggcggcgccacggcgctcagcccggacttcttccgggagagaggggtgcccatggacgacgacaccgtgcacctcgacatggagatggagtggttccgtgatctgctcggcatgctctgcaccggcggcgacatggacggttgcaagggcatgatgaatcaatctcttttcttggttggagaaatcggaggcaatgattacaaccttcctcttatgagcggcatgtccattgaaaagattcgcaacttcactcctagtgtcattgccaaaaattcttccataatcaccgaattgaggatcctttggtcgcttgctgtggtggaagaggaccttatggtgtatctgcatctgtacgctgtggatatggcgaatacaaagtgtgtgatgacccagcaaaatatgcatcgtgggatggcttccatccatcagaagctgcatacaagggcattgcaattggcctgctacagggttcatacactcaacctccaattgttagcatcactaattcttgtccgcagataa
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| Protein seq | MVSSTSGGLSPPAVVLAVAVVLSAAASRALAAPCYPRVFCFGDSLTDTGNIAFLYGNDSRRPSLWPPYGETFFHRATGRSSNGRLIIDFIAEAMGLPFVRPYWGGQTAGNFASGANFAVGGATALSPDFFRERGVPMDDDTVHLDMEMEWFRDLLGMLCTGGDMDGCKGMMNQSLFLVGEIGGNDYNLPLMSGMSIEKIRNFTPSVIAKNSSIITELRILWSLAVVEEDLMVYLHLYAVDMANTKCVMTQQNMHRGMASIHQKLHTRALQLACYRVHTLNLQLLASLILVRR
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsCMeo_01g0027280 | OsCMeo_01g0027280.07 | Chr01 | 27308765 | 27309904 | + | IsoSeq | ||
| CDS seq | ggagcagagagaaagaatggcttcctctacctccgggagaagaggagagctgcggcggtggtgctggcggccgtggctgtgctgctctcggcgtcacaggcactggcggcgccgtgctatccgcgcgtgttcagcttcggggactcgcttacagacaccggcaacatcgctttcctctacggcaacgactcccgccggcccacgctgtggccaccctacggcgagaccttcttccaccgcgccaccggccgcgcctccaacggccgcctcatcatcgacttcattgctgacgcgctggggctgccattcgtgcggccgtactggagcgggcggaccgcgggggacttcgcccacggggccaacttcgcggtgggcggcgccacggcgctcagcccggatttctaccgggagagaggcgtgcacgtgcgcgacaccgtgcacctcgacatggagatgaactggttccgcgatctgctcggcctgctctgcccagacgatcttgccggttatccgcattttatcctccactgc
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| Protein seq | GAERKNGFLYLREKRRAAAVVLAAVAVLLSASQALAAPCYPRVFSFGDSLTDTGNIAFLYGNDSRRPTLWPPYGETFFHRATGRASNGRLIIDFIADALGLPFVRPYWSGRTAGDFAHGANFAVGGATALSPDFYRERGVHVRDTVHLDMEMNWFRDLLGLLCPDDLAGYPHFILHC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr01 | 27301990 | 27302699 | + | OsCMeo_01g0027280.03,OsCMeo_01g0027280.06 | OsCMeo_01g0027280.05,OsCMeo_01g0027280.03,OsCMeo_01g0027280.06 | All |
| A5 | Chr01 | 27301958 | 27302699 | + | OsCMeo_01g0027280.05 | OsCMeo_01g0027280.05,OsCMeo_01g0027280.04 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 2.658433 | 63.496506 | 4.767119 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0649400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g46120 | RBH | 0.000000 | 0.353778 | 0.213710 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0649400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0027340 | SBH | 0.260041 | 20.908525 | 2.336586 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0026830 | RBH | 0.203569 | 1.455687 | 0.704922 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0027300 | RBH | 0.436857 | 0.0 | 7.933193 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0026520 | RBH | 0.043311 | 0.177659 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0026290 | SBH | 3.381404 | 0.000000 | 7.553514 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0440200 | RBH | 0 | 0.1429665 | 0.0246645 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0025950 | RBH | 0.065240 | 0.747979 | 0.342313 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0429100 | SBH | 4.1148525 | 1.4302605 | 2.271668 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0026200 | SBH | 0.029404 | 0.114749 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0026120 | RBH | 0.460061 | 39.808311 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0026450 | RBH | 3.212515 | 6.024920 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0026500 | RBH | 0.617375 | 1.078523 | 1.113019 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0026350 | RBH | 1.150223 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G026700 | RBH | 0.270716 | 2.074466 | 2.093035 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0026500 | RBH | 1.870623 | 9.602602 | 11.271278 |
