Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_01g0023600 | OGI:01013090 | 16/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:25279184-25282321 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | atgggtccatcttcatcctggtgcctggtgctcatcacgatgatcaccgtagccatgatcactgccacctcctacgtcCAcgctcagcgcggatctggcggcggcggcaagtgcatcgcggcagagagggccgcgcgcgctgctctccttcaaagccggcatcacgagcgacccggcgaagctgctgaaatcatggcgcggcgatgactgctgcagctggagcggcgtcaggtgcggcaacgagaccggccatgtcgtcgggctcgacctccgcgccgccttcttcttgagcaacgagaccttcgtttggtgcttctccggcgtagcacctgacgggatgctcggcgagataagctcctctttgcttgctctgaagcacttgaagcatctcgatcttagtgggaactaccttggtggcgtaggcgtgccgatgcctagtttcttgggctctttcaagagcttgacgtatttgaaccttgcctgcatgaactttgatggtagattgccgcctcagcttggaaacctctccagattgcaacatctcaaccttgcaacttaccaagaaaacaccatgcgtcctggtgatgtatcatggttacggcacctcggtttgctccgatttctcgacatgagtggattgaacctcacttccaatggcgactgggTtcggttagtgaccagcctttcttatttgaaggtccttcaactcggtggctgtGggcttagtttaccacatgaaccaacagcacattcAaatataagttcacttgaaattcttgacctatcaagtaacagagtcgacacaattaatccagcctattggttttgggatgtccgGaccatcaggGAactgcaacTtggaagaaatcaaattactggtccatttccagctgcaatcGgaagcatgacatcacttgaggtacttactctaGgtggcaattacatcacaGgtgtgaagtctgaaatgatgaaaaacttctgcaacttgcggtggctagagctgtggtcgaatgagattAatcaagatatggcagaatttatggagggattgcctcGgtgtacaaagagttctttacaaaccttagatctatctgctaccaatatcactggaggcatcccgagctggatcaaccactGgagcaatttacgttctcttcaactctcggctaataagcttgaaggaTtaatacctttggaaattggtaagaTGactaatctctccacattgtatctagacAacaAccagctcaacggttcagtgtcagaggaacattttgcaagtttagcgtcattGgaagatatagacttgtcttacaattcaatacacattacgatcaactcagaTtgggttcccccaTttagcctatatcaGgctttatttgcacgtagcaaaatgggacctcattttccactgtggcttaaaGggcagagtaatgtttacttccttgacatttctgatgccggcataactgacaatcttccagactggtttggactgtattttcgaatgttcaatatttgaacatctcttgtaatcaaataagtggcacactgccagcAactcttgaatttatgacttcagcaatgacacttgacctcAactcgaacaggctaacaggtttactgccacagctaccacaatatttgggaacattggacatctccaacaattctttgtcaGgaccactaccgctaatctttggagctccaatgcttacAcaactagtactgtccataaataaaatcaacggcaccattccatcttatAtttgtgaattgaagtatttagaggtaTtagacctgtcagataactttctagttggaaaacttcctcgatgctccaacggttcagaggctaagcaagaacttaacatgtcccctgattctacacaaatgcaactgtctgctttgattttgtacaacAatgacctgtcaggcaaatttcctgaatttttgcaacattgccaagagttgactcttcttcacctcgcccacaataaaTttgttggagagttgccaatatggatagcaGagaaattaccccGtttgtcatatcttcaaTtgcggtacaatttgttctctggctctattccagttcagctaacaaaacttgaaaatctccgatatttGgaccttgcatataacaggATatcaGgaagtatacctcctattttaggaGgtttaaaagcaatgattcaaggtaatagtacaaaatatactaatcccttggtgtggaattactataggccaagaaatccaaacgacttcaatgatgggtactacataaaatatcataatagcctactggttgtggtaaaaggtcaggaactttattacaccagtacactcatatatatggttggtcttgatttttcctgcaacaatttaggaggagatatcccagaggaaataacatctcttgttggactgaagaacttgaacttctcccataaccatttaacaggaaacattccagagaagattggtctcctaagatatgtggagtctcttgacctatcattcaacatgatatcaggcgaaatcccttcaagtctctcagacatggtttcactgagctacttgaacctgtcattcaacAatttgtccGgaagaataccatcagggAatcagctacagacacTtggtgatccagatttcatatacatcggcaattattatctctgtggacctcctctttcaaggaattgttctggaccggaggtaactacaggccttcttgaagggcattcaacagagaaaacatactttcaccttgggctggctgtaggatttgtgatgggactttggttagtctttattggcttattatttctgAagacctgcagatttcgctactttcaactgtctgacaaactgcaggacagcatacaaacatctgtgtggaaaacatctgcagagtggtttcacaaatcacagaggattcaaaacaagagggacaaggccaggcatctgtctctgaagacacatgAatttagaactctcttccttttcatctcgttgtttgttcttcagatttaccccttttgcacgagtaGtttggcaacagaatcttcAacAaaactaatactattggtgtgtccaaGtctcatgttcatgttctttcaggttaccccatAa
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| CDS seq | atgggtccatcttcatcctggtgcctggtgctcatcacgatgatcaccgtagccatgatcactgccacctcctacgtcCAcgctcagcgcggatctggcggcggcggcaactggagcggcgtcaggtgcggcaacgagaccggccatgtcgtcgggctcgacctccgcgccgccttcttcttgagcaacgagaccttcgtttggtgcttctccggcgtagcacctgacgggatgctcggcgagataagctcctctttgcttgctctgaagcacttgaagcatctcgatcttagtgggaactaccttggtggcgtaggcgtgccgatgcctagtttcttgggctctttcaagagcttgacgtatttgaaccttgcctgcatgaactttgatggtagattgccgcctcagcttggaaacctctccagattgcaacatctcaaccttgcaacttaccaagaaaacaccatgcgtcctggtgatgtatcatggttacggcacctcggtttgctccgatttctcgacatgagtggattgaacctcacttccaatggcgactgggTtcggttagtgaccagcctttcttatttgaaggtccttcaactcggtggctgtGggcttagtttaccacatgaaccaacagcacattcAaatataagttcacttgaaattcttgacctatcaagtaacagagtcgacacaattaatccagcctattggttttgggatgtccgGaccatcaggGAactgcaacTtggaagaaatcaaattactggtccatttccagctgcaatcGgaagcatgacatcacttgaggtacttactctaGgtggcaattacatcacaGgtgtgaagtctgaaatgatgaaaaacttctgcaacttgcggtggctagagctgtggtcgaatgagattAatcaagatatggcagaatttatggagggattgcctcGgtgtacaaagagttctttacaaaccttagatctatctgctaccaatatcactggaggcatcccgagctggatcaaccactGgagcaatttacgttctcttcaactctcggctaataagcttgaaggaTtaatacctttggaaattggtaagaTGactaatctctccacattgtatctagacAacaAccagctcaacggttcagtgtcagaggaacattttgcaagtttagcgtcattGgaagatatagacttgtcttacaattcaatacacattacgatcaactcagaTtgggttcccccaTttagcctatatcaGgctttatttgcacgtagcaaaatgggacctcattttccactgtggcttaaaGggcagagtaatgtttacttccttgacatttctgatgccggcataactgacaatcttccagactggctaacaggtttactgccacagctaccacaatatttgggaacattggacatctccaacaattctttgtcaGgaccactaccgctaatctttggagctccaatgcttacAcaactagtactgtccataaataaaatcaacggcaccattccatcttatAtttgtgaattgaagtatttagaggtaTtagacctgtcagataactttctagttggaaaacttcctcgatgctccaacggttcagaggctaagcaagaacttaacatgtcccctgattctacacaaatgcaactgtctgctttgattttgtacaacAatgacctgtcaggcaaatttcctgaatttttgcaacattgccaagagttgactcttcttcacctcgcccacaataaaTttgttggagagttgccaatatggatagcaGagaaattaccccGtttgtcatatcttcaaTtgcggtacaatttgttctctggctctattccagttcagctaacaaaacttgaaaatctccgatatttGgaccttgcatataacaggATatcaGgaagtatacctcctattttaggaGgtttaaaagcaatgattcaaggaggagatatcccagaggaaataacatctcttgttggactgaagaacttgaacttctcccataaccatttaacaggaaacattccagagaagattggtctcctaagatatgtggagtctcttgacctatcattcaacatgatatcaggcgaaatcccttcaagtctctcagacatggtttcactgagctacttgaacctgtcattcaacAatttgtccGgaagaataccatcagggAatcagctacagacacTtggtgatccagatttcatatacatcggcaattattatctctgtggacctcctctttcaaggaattgttctggaccggagatttaccccttttgcacgagtaGtttggcaacagaatcttcAacAaaactaatactattggttaccccatAa
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| Protein seq | MGPSSSWCLVLITMITVAMITATSYVHAQRGSGGGGNWSGVRCGNETGHVVGLDLRAAFFLSNETFVWCFSGVAPDGMLGEISSSLLALKHLKHLDLSGNYLGGVGVPMPSFLGSFKSLTYLNLACMNFDGRLPPQLGNLSRLQHLNLATYQENTMRPGDVSWLRHLGLLRFLDMSGLNLTSNGDWVRLVTSLSYLKVLQLGGCGLSLPHEPTAHSNISSLEILDLSSNRVDTINPAYWFWDVRTIRELQLGRNQITGPFPAAIGSMTSLEVLTLGGNYITGVKSEMMKNFCNLRWLELWSNEINQDMAEFMEGLPRCTKSSLQTLDLSATNITGGIPSWINHWSNLRSLQLSANKLEGLIPLEIGKMTNLSTLYLDNNQLNGSVSEEHFASLASLEDIDLSYNSIHITINSDWVPPFSLYQALFARSKMGPHFPLWLKGQSNVYFLDISDAGITDNLPDWLTGLLPQLPQYLGTLDISNNSLSGPLPLIFGAPMLTQLVLSINKINGTIPSYICELKYLEVLDLSDNFLVGKLPRCSNGSEAKQELNMSPDSTQMQLSALILYNNDLSGKFPEFLQHCQELTLLHLAHNKFVGELPIWIAEKLPRLSYLQLRYNLFSGSIPVQLTKLENLRYLDLAYNRISGSIPPILGGLKAMIQGGDIPEEITSLVGLKNLNFSHNHLTGNIPEKIGLLRYVESLDLSFNMISGEIPSSLSDMVSLSYLNLSFNNLSGRIPSGNQLQTLGDPDFIYIGNYYLCGPPLSRNCSGPEIYPFCTSSLATESSTKLILLVTP |
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| Function | Receptor-like protein EIX1 [UniProtKB/Swiss-Prot:Q6JN47] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0023600 | OsLiXu_01g0023600.01 | Chr01 | 25279184 | 25282321 | + | NAM | ||
| CDS seq | atgggtccatcttcatcctggtgcctggtgctcatcacgatgatcaccgtagccatgatcactgccacctcctacgtcCAcgctcagcgcggatctggcggcggcggcaactggagcggcgtcaggtgcggcaacgagaccggccatgtcgtcgggctcgacctccgcgccgccttcttcttgagcaacgagaccttcgtttggtgcttctccggcgtagcacctgacgggatgctcggcgagataagctcctctttgcttgctctgaagcacttgaagcatctcgatcttagtgggaactaccttggtggcgtaggcgtgccgatgcctagtttcttgggctctttcaagagcttgacgtatttgaaccttgcctgcatgaactttgatggtagattgccgcctcagcttggaaacctctccagattgcaacatctcaaccttgcaacttaccaagaaaacaccatgcgtcctggtgatgtatcatggttacggcacctcggtttgctccgatttctcgacatgagtggattgaacctcacttccaatggcgactgggTtcggttagtgaccagcctttcttatttgaaggtccttcaactcggtggctgtGggcttagtttaccacatgaaccaacagcacattcAaatataagttcacttgaaattcttgacctatcaagtaacagagtcgacacaattaatccagcctattggttttgggatgtccgGaccatcaggGAactgcaacTtggaagaaatcaaattactggtccatttccagctgcaatcGgaagcatgacatcacttgaggtacttactctaGgtggcaattacatcacaGgtgtgaagtctgaaatgatgaaaaacttctgcaacttgcggtggctagagctgtggtcgaatgagattAatcaagatatggcagaatttatggagggattgcctcGgtgtacaaagagttctttacaaaccttagatctatctgctaccaatatcactggaggcatcccgagctggatcaaccactGgagcaatttacgttctcttcaactctcggctaataagcttgaaggaTtaatacctttggaaattggtaagaTGactaatctctccacattgtatctagacAacaAccagctcaacggttcagtgtcagaggaacattttgcaagtttagcgtcattGgaagatatagacttgtcttacaattcaatacacattacgatcaactcagaTtgggttcccccaTttagcctatatcaGgctttatttgcacgtagcaaaatgggacctcattttccactgtggcttaaaGggcagagtaatgtttacttccttgacatttctgatgccggcataactgacaatcttccagactggctaacaggtttactgccacagctaccacaatatttgggaacattggacatctccaacaattctttgtcaGgaccactaccgctaatctttggagctccaatgcttacAcaactagtactgtccataaataaaatcaacggcaccattccatcttatAtttgtgaattgaagtatttagaggtaTtagacctgtcagataactttctagttggaaaacttcctcgatgctccaacggttcagaggctaagcaagaacttaacatgtcccctgattctacacaaatgcaactgtctgctttgattttgtacaacAatgacctgtcaggcaaatttcctgaatttttgcaacattgccaagagttgactcttcttcacctcgcccacaataaaTttgttggagagttgccaatatggatagcaGagaaattaccccGtttgtcatatcttcaaTtgcggtacaatttgttctctggctctattccagttcagctaacaaaacttgaaaatctccgatatttGgaccttgcatataacaggATatcaGgaagtatacctcctattttaggaGgtttaaaagcaatgattcaaggaggagatatcccagaggaaataacatctcttgttggactgaagaacttgaacttctcccataaccatttaacaggaaacattccagagaagattggtctcctaagatatgtggagtctcttgacctatcattcaacatgatatcaggcgaaatcccttcaagtctctcagacatggtttcactgagctacttgaacctgtcattcaacAatttgtccGgaagaataccatcagggAatcagctacagacacTtggtgatccagatttcatatacatcggcaattattatctctgtggacctcctctttcaaggaattgttctggaccggagatttaccccttttgcacgagtaGtttggcaacagaatcttcAacAaaactaatactattggttaccccatAa
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| Protein seq | MGPSSSWCLVLITMITVAMITATSYVHAQRGSGGGGNWSGVRCGNETGHVVGLDLRAAFFLSNETFVWCFSGVAPDGMLGEISSSLLALKHLKHLDLSGNYLGGVGVPMPSFLGSFKSLTYLNLACMNFDGRLPPQLGNLSRLQHLNLATYQENTMRPGDVSWLRHLGLLRFLDMSGLNLTSNGDWVRLVTSLSYLKVLQLGGCGLSLPHEPTAHSNISSLEILDLSSNRVDTINPAYWFWDVRTIRELQLGRNQITGPFPAAIGSMTSLEVLTLGGNYITGVKSEMMKNFCNLRWLELWSNEINQDMAEFMEGLPRCTKSSLQTLDLSATNITGGIPSWINHWSNLRSLQLSANKLEGLIPLEIGKMTNLSTLYLDNNQLNGSVSEEHFASLASLEDIDLSYNSIHITINSDWVPPFSLYQALFARSKMGPHFPLWLKGQSNVYFLDISDAGITDNLPDWLTGLLPQLPQYLGTLDISNNSLSGPLPLIFGAPMLTQLVLSINKINGTIPSYICELKYLEVLDLSDNFLVGKLPRCSNGSEAKQELNMSPDSTQMQLSALILYNNDLSGKFPEFLQHCQELTLLHLAHNKFVGELPIWIAEKLPRLSYLQLRYNLFSGSIPVQLTKLENLRYLDLAYNRISGSIPPILGGLKAMIQGGDIPEEITSLVGLKNLNFSHNHLTGNIPEKIGLLRYVESLDLSFNMISGEIPSSLSDMVSLSYLNLSFNNLSGRIPSGNQLQTLGDPDFIYIGNYYLCGPPLSRNCSGPEIYPFCTSSLATESSTKLILLVTP
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.155156 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0603500 | SBH | 0.348528 | 1.047418 | 0.851845 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g41910 | RBH | 0.220099 | 0.356444 | 0.196075 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0603500 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0024430 | RBH | 0.793975 | 0.798093 | 0.961234 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0024050 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0024360 | SBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0023680 | RBH | 0.180688 | 0.154439 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0023440 | SBH | 2.775532 | 0.472948 | 3.969628 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0397400 | RBH | 0.3300925 | 0.0101955 | 0.0058265 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0023240 | SBH | 0.015733 | 0.067010 | 0.040080 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0386200 | RBH | 1.230185 | 0.1296265 | 0.663053 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0023380 | RBH | 0.048732 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0023340 | SBH | 0.000000 | 0.000000 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0023590 | SBH | 0.000000 | 1.506554 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0023510 | SBH | 0.042830 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G023710 | SBH | 0.588999 | 0.462985 | 2.210793 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0023420 | RBH | 0.877057 | 0.810886 | 3.737909 |
