Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLiXu_01g0001340 OGI:01002250 | 16/16 LIU XU | Os125827RS1 | Gramene(+IsoSeq) Chr01:932131-933893
Gene Symbol RLCK4, OsRLCK4, RLCK18, OsRLCK18
DNA seq

ttactggtagctttcgaacagacatatgctttcgtcgtcgtcgtcctcatgctcctcggagattgcagttagatcagatggcatattgtaggactccactccaggGaattgctcatcatcacagaagaatggccttggaggaacctgcagttcatcactaccaccttcaagcatctctatcacctcgctcatcgtcggtcgatcacacgacctcatctgaatgcaccataatccaacaatgcaaagcttcttctccagttcatgcatgtcagcaatgtcagaGatctcgcttgtttctcgccgagtcagctccctgtacacccgtgatggataatatgcttgacttgagtttgctgcatttggatccgcgttccttcttcctccagccatctccaaaagtagcattccgaagctataaacatcggatttgcttgatattacgccaaagctccgagagatcatctcaggagctatgtaacctatcgttcctcgtgcggcactcactggcacaaagctcttgtcccttgggtacagcttggcaagaccgaaatctgcaacttttgggacaaagttatcatcaagaaggatgttatgcggcttgatgtcaaagtgtagaatctgcatctcacacccctgatgcaaatagttgatccctcttgcaatgcccaaagcgatctcattcagcttatcccaggagaaactcttctctgacgagaagatgtacttgtcaagagaaccccgaggcatgtactcgtatacaagtgccctcctcatttcttcagagcaaaacccgaccagacgcaccacattgacatggtggatccttccaatggttgagacctcacgatgaactcatctccgttgcagctggagctaccagtcagcatcttgacggcaacatggacattacccgggagcaatacacctttatatacagagccgtagcctccttgtcctagcttgtctcgaaaatgggatgtgattgcaatgatgtctgtgtaggcgtacctcatcggaccaatcatctgttgcatccggaggaacttttctactgcgtcgattgtgatccttgttttccaatacttgtaggcgaggaagatgaatactgccaacgatgccaacagtaatctgcatataactttacagacaaaccaagagcccaagaagcaggcttagataatgaaagagtagatgacagtttcactcagaaagaacattacagctataatgattaagtgaaggtaattcaggagtaccaaaatggagcttgatgatagcaatggcagatactacgataaccacgagtgacattaactttgttgtgtaggcgtgatcagtagctctgcattctgcgaaaattgaacacgaaatcccttacttatgaatccaacgatatcagtgtaacttgcattctgtagtggtgttttgtcccgtatatgttgagtatcaaagggaatcatggccaggtgtcgacaagaaggttggagctctccaactatacagccaaatgacgagacgaagacaaaagaattgttggcaggcaggcaatcgacgggcatgtaccgtggcataatatctgctattggtctggaacaattcgcaaagcatgcccaagcaatgccataataagcagtagccagatcgataaagccataagaatcagctggagtatcccacacagaaagaggccagtcagtgttgggagtgtgatcggagcgaggtagagggcagctgcttgcgccgtttgtatcaccatccttcat

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CDS seq

atgaaggatggtgatacaaacggcgcaagcagctgccctctacctcgctccgatcacactcccaacactgactggcctctttctgtgtgggatactccagctgattcttatggctttatcgatctggctactgcttattatggcattgcttgggcatgctttgcgaattgttccagaccaatagcagatattatgccacgattactgttggcatcgttggcagtattcatcttcctcgcctacaagtattggaaaacaaggatcacaatcgacgcagtagaaaagttcctccggatgcaacagatgattggtccgatgaggtacgcctacacagacatcattgcaatcacatcccattttcgagacaagctaggacaaggaggctacggctctgtatataaaggtgtattgctcccgggtaatgtccatgttgccgtcaagatgctgactgaaatgaggagggcacttgtatacgagtacatgcctcggggttctcttgacaagtacatcttctcgtcagagaagagtttctcctgggataagctgaatgagatcgctttgggcattgcaagagggatcaactatttgcatcaggggtgtgagatgcagattctacactttgacatcaagccgcataacatccttcttgatgataactttgtcccaaaagttgcagatttcggtcttgccaagctgtacccaagggacaagagctttgtgccagtgagtgccgcacgaggaacgataggttacatagctcctgagatgatctctcggagctttggcgtaatatcaagcaaatccgatgtttatagcttcggaatgctacttttggagatggctggaggaagaaggaacgcggatccaaatgcagcaaactcaagtcaagcatattatccatcacgggtgtacagggagctgactcggcgagaaacaagcgagatCtctgacattgctgacatgcatgaactggagaagaagctttgcattgttggattatggtgcattcagatgaggtcgtgtgatcgaccgacgatgagcgaggtgatagagatgcttgaaggtggtagtgatgaactgcaggttcctccaaggccattcttctgtgatgatgagcaattCcctggagtggagtcctacaatatgccatctgatctaactgcaatctccgaggagcatgaggacgacgacgacgaaagcatatgtctgttcgaaagctaccagtaa

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Protein seq

MKDGDTNGASSCPLPRSDHTPNTDWPLSVWDTPADSYGFIDLATAYYGIAWACFANCSRPIADIMPRLLLASLAVFIFLAYKYWKTRITIDAVEKFLRMQQMIGPMRYAYTDIIAITSHFRDKLGQGGYGSVYKGVLLPGNVHVAVKMLTEMRRALVYEYMPRGSLDKYIFSSEKSFSWDKLNEIALGIARGINYLHQGCEMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDKSFVPVSAARGTIGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNADPNAANSSQAYYPSRVYRELTRRETSEISDIADMHELEKKLCIVGLWCIQMRSCDRPTMSEVIEMLEGGSDELQVPPRPFFCDDEQFPGVESYNMPSDLTAISEEHEDDDDESICLFESYQ

Function Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLiXu_01g0001340 OsLiXu_01g0001340.01 Chr01 932131 933893 - NAM
CDS seq

atgaaggatggtgatacaaacggcgcaagcagctgccctctacctcgctccgatcacactcccaacactgactggcctctttctgtgtgggatactccagctgattcttatggctttatcgatctggctactgcttattatggcattgcttgggcatgctttgcgaattgttccagaccaatagcagatattatgccacgattactgttggcatcgttggcagtattcatcttcctcgcctacaagtattggaaaacaaggatcacaatcgacgcagtagaaaagttcctccggatgcaacagatgattggtccgatgaggtacgcctacacagacatcattgcaatcacatcccattttcgagacaagctaggacaaggaggctacggctctgtatataaaggtgtattgctcccgggtaatgtccatgttgccgtcaagatgctgactgaaatgaggagggcacttgtatacgagtacatgcctcggggttctcttgacaagtacatcttctcgtcagagaagagtttctcctgggataagctgaatgagatcgctttgggcattgcaagagggatcaactatttgcatcaggggtgtgagatgcagattctacactttgacatcaagccgcataacatccttcttgatgataactttgtcccaaaagttgcagatttcggtcttgccaagctgtacccaagggacaagagctttgtgccagtgagtgccgcacgaggaacgataggttacatagctcctgagatgatctctcggagctttggcgtaatatcaagcaaatccgatgtttatagcttcggaatgctacttttggagatggctggaggaagaaggaacgcggatccaaatgcagcaaactcaagtcaagcatattatccatcacgggtgtacagggagctgactcggcgagaaacaagcgagatCtctgacattgctgacatgcatgaactggagaagaagctttgcattgttggattatggtgcattcagatgaggtcgtgtgatcgaccgacgatgagcgaggtgatagagatgcttgaaggtggtagtgatgaactgcaggttcctccaaggccattcttctgtgatgatgagcaattCcctggagtggagtcctacaatatgccatctgatctaactgcaatctccgaggagcatgaggacgacgacgacgaaagcatatgtctgttcgaaagctaccagtaa

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Protein seq

MKDGDTNGASSCPLPRSDHTPNTDWPLSVWDTPADSYGFIDLATAYYGIAWACFANCSRPIADIMPRLLLASLAVFIFLAYKYWKTRITIDAVEKFLRMQQMIGPMRYAYTDIIAITSHFRDKLGQGGYGSVYKGVLLPGNVHVAVKMLTEMRRALVYEYMPRGSLDKYIFSSEKSFSWDKLNEIALGIARGINYLHQGCEMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDKSFVPVSAARGTIGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNADPNAANSSQAYYPSRVYRELTRRETSEISDIADMHELEKKLCIVGLWCIQMRSCDRPTMSEVIEMLEGGSDELQVPPRPFFCDDEQFPGVESYNMPSDLTAISEEHEDDDDESICLFESYQ

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.148235 0.000000 0.000000

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0117400 RBH 0.000000 0.000000 0.000000
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g02830 SBH 0.528440 0.476056 0.715927
Nipponbare | IRGSP 1.0 | RAP-db Os01g0117400 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0001280 SBH 0.000000 0.000000 0.436553
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0001070 SBH 0.160955 0.171025 0.792215
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0001230 SBH 0.875923 0.000000 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0001170 RBH 0.015936 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0001270 SBH 1.961982 3.915113 3.093100
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0016000 SBH 1.6942795 5.724617 3.7314985
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0001250 SBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0015200 SBH 1.617323 0.890693 1.779883
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0001050 SBH 0.235434 0.054611 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0001400 SBH 0.000000 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0001250 SBH 2.477113 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_Ung0073050 RBH 0.143638 0.0 0.039886
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0001260 SBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G001240 SBH 0.900158 1.196784 0.692669
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0001140 SBH 3.493958 2.049984 1.707907
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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