Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLima_01g0001050 OGI:01002250 | 16/16 LIMA | Os127564RS1 | Gramene(+IsoSeq) Chr01:714233-742519
Gene Symbol RLCK5, OsRLCK5, RLCK7, OsRLCK7, RLCK10, OsRLCK10, Os8Tak2, YK21, OsRLCK12, RLCK12, RLCK13, OsRLCK13, RLCK16, OsRLCK16, RLCK18, OsRLCK18
DNA seq

aaaaatttaagtactagcactttcagccataattcagtactactttctcatggtagaaaatacaactttatcatatgcaaaaataaatagcataccacaagatcacattttcttgctcctgctttatactctgttattccctaaaacaagataacttccaaatttcaacaatgccaagggaacatatctgtttacaacaatatgtagcctcagcgttttacaacttacttaccacctttcctatttggcatcaaagcacatgcacaagcttcactcatcctcctctgagatttcagttagttcagaggagaaacggcaagaatccactagcaatggcaggggttcatcatcgcagaagaatggccttgaaggcagctgcagaccatcaacatcaccttcaagcatttctatgacctcactcatcgttggacgatcaggaggcttcatttgaatgcaatgtagaccaacaacacacaacttcttttccagctcatgcatattgaaggcattggcaatctcacccatcttttgttgaaccagctgattatacacccaagatggataatatgactggcttgagctcgacatatcctgcttagagttccttcgccctccagccatctccaacagaagcatcccaaagctataaacatcagatttgctagatatgacaccaaagctccgagatatcatctcaggagcaatataacctactgttcctcgtgcagcgctaactggcacaaaactgttatcctgtggatacagtttggcgaggccaaaatcggcaacttttgggacgaaattgctatcaagaaggatgttgtgcagcttgatatcaaaatgtagaatctgcatatcacacccctgatgtaagtagtttattcctctagcaatgcccaatgcgatctcattgagcttgtcccaagagagactcttgtcaggagagaagatgaacctgtcaagagatccatggggcatgtactcatacacaagtgctctcctcatttcctctgcacaataccccactagacgtactacattgacatgatggatactgccaatggtggatacctcgctgatgaattcttctccattacaattgtagttggccagcattttgatggcaacatggacatcaccaggcagtatcactcccttgaacacggatccatagccaccctggcccaacttgtctctaaaatggcttgtcattgcaatgatgtctgtataggcgtaccttgttggaccaagcattagctgcattcgtaaaaacttctcaactgcgtcgatttttattctagttttccaatacttgaaggcaaggaaggtcaatagtgtcaacggagctatcacgaacctgcataaaactgcataaaaaaacaagtttacataaacagtgataacctttagtaaatgtgtctttagacattggaacggtgcagtggtgattatgtactgtataattaagaagacagaatcgtagaagtaccagcaatccacttgaaaacaaacaaagcaaattgtacaatgaatccgccataaaattctatttttccacgaagcatccccatcatgtattgtggcatatcgaaataatctttcatgcccactcctctaattatgcaggaccagaaactaaagtcaataaaaagcatgtccacaatctgatccttgatggtttgattggacaatggttcttcatgaaatcccctgcaaggccgtgacatggtagagaaaagaatggcttagagagcgtaacaattgttttaagacaaatatgtactcaagtttatgtatgaatgcattctcgaaaaagtgtatgtatgaatgtaatggaacaacacccgaaactcaccgaatcgaccccatcagacaatccttgatgtgcccaatcctactccacctatgtattatgggaaaatgaacagcaaatccattcctcatggatctgacgatgtctgaaaagcttgcattatgtggcaatggcgagtcccaaccacccaagggaatcatggcaaggtagcgacatgaagtctcaaggtttccgatgattggaaaaacagatggaggcattatccaggaaccaaacacataaacaaacgaagagcttgtgctcaggcaatcaacaggaacgtacacactattgttccttactgcctgtgaacaattcacaaagctaacccatgtagctccaggtccagggtcaagggccaggtcccagccgccatgtgatccctggataccccccgaaacgaaaggaagctgatccgagcgaggaagagggcagctgctgtttgtatctttcaggctggcatccacaacccagaagacagaagtagtgtagttgatgctggttacatagtatgtccctgtgttgatcctaatggtagccttgctatcgctgcaatctaactcatatgacggaacaccgcacctttgtggatcacctcgccggcggaaaggatgggaaatgttctggagatgtccacaggagaaaggatagcacccttgccgcccctcgacatctcctgcaagagcaagaacagcaaagatgaaaacaaaggcttgcattgtggtagagaggggatgcatgctactcgctcagcccacaaggacaaggttggctaaccaagacaagtgcttatgttggctgctgcatatgatccgtgttccgtgattttgttgactaatccagaccatattgcaattagtcaatattaaattcttccacagtctctgatagagatggggcagggatggaccgaccgaagtatctgatagagtaaagccaaattcgtagtaccaaactttgactaactttcgctacaaaataggagtatatgattgattgccccccccccccccccccctgttattgtagcaaccggtgatcatacagccttcctgctctctctattctgtttgcagtcctcttcaccctaattttctatgcacctccggccgttgcagtacacacacagagagagagagagatgggtactgttctcgcaacagccttcctgctctctgttctcagccatggcacctactacatagccatggcttcttcatcttgggatgaccaagacttcttcaggcattgtccaccgtcccggtgcagcgacggtggaccagagatccggttccctcaccggctgcaatccagcaacacaccatcatcatgcgacagttcacacgccaagctaatatgctctggccaggacaccatcctacatcacccatttctgggcccttgcaaggtgactgccatagattacaagaaggctgtcatgaagatcatcccgtttgggggctcatcttctccatgcctgcttcacaagttcaattccacaaatctatcagctgatgtcaacgatcagaatcaattatacctcactgaacctgggagaatagtgcgttgttcaaaagagttcacaacaagtagagcttctatgatcgacggctacaaaactgttattgccgataaagttgtccgcttgatcccctgcctaagcgacaccacaagccacttctcatatttggtgtctacttggctgtacctgtatgcgcttccattggactgcatggtcgtctcaaaaggcaacattccaatccccagtccatacgctggtttaacgttcaagcaaatggcagaaaggataatcaactctgctgagatcactcttgatttgggtctcgggagcattccctacaattgcgtgcggtgtgaacggcaagggcaacactgcgcattcagctcacaaagaaatcaaacattctgcatgcatcacggtaccattctaacaatacccacccacacacatatagctttatttcctacaatagttaagctcttgcatttgatccacccatacagtactaccttttgaaacttctaggagatgagttgcaaaattattttgcaaactagtagtacaaaccatttgaatatgtgactgtaactatttaatcattctttacaattctcatagatatctcaaaaaagaagtggccaatggagaataatgtttgctcaactagcaacaatcagacacaatgattataaatttacatcttctcatagatatgcagctacaatcaacaccattgtactgctaatgaaaaggacccgaaagcaaaagtaacttaacttaagtaacaaaagactcctacaattagaaaatctaaaggttaagtaagcatacaacacaactaatcttacatgttctgatgataatcatgattctgctgtcttgagtacagaagactgcagttgatgatactgtgctgagcttttgcacaatcagatatacacacactaggagaagttatctatcacATatatatttgcataatcaaagtacagttgtaaccccaaaactaaaactctatgatatcccacagggtccatatttttctgcaatgtcgtaggtctatgctgggtttacattttttcaagagtaaatttctattttatctgtaaaccatcaaatagatcttattgtctgctttggtatttgcaggttcacgcgtcaaagtcattgcaggtactattgcaatccaaacctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgacagcaggagttctgctggatatattaagaaggagaagcaaagtgttcgagcaatagtcgttattacatggctaaataagccaactggaggaaggcaggattaagcaaacctatctttttattcacaagaaaaaaatgaaataaacaaagttatctgtagcagataaaatagttgttgatggctgctctaactacattcttctgataaaaagacactgcgttcttttatacccatcaagataagccactcactatgggataattttctgccctgatgcaaaatgctgatttcttattctatttactcagcaacatcagtagctgcatttgttgctgtttcattggtggtggctactgtgctctatctctccctgaagcaaaggtataatgaagaggtac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tgctgcattttcttttcaAGagtaaaaaaaaaagtgctgcatcatccagaagaggaaaaaaaATtAaaaataacaagggaagaaagctaagcAaagggattattaccaatgcagcgaggctcaggatggaaattgactaataatgtgggaaacggaggtggtgtgagggacttgagaagacgataccattgaagacatcgggcttatagattcgaccggatcttgacacggtagcaataacagatggcgtcatggcggcggtatgggcgacggcgaggcttggtctcgcatataccgggaggaaacggcaccttacccatctgtcgacggaggcgagaagcggcggcgtaggcagaccgccgcattaaccggagctctcgccgggaagagtggtgggggacggaggaaggagaagggagtaatttgttttttcttttctttcttttttttctttttttgagagagagaaagatggagaaggggatgattgctGggccactggggtggcccatctaaggccttgcttcacatgtggcccaattcacgagcaaatataatgctcaactcactagctagtaaaaaacacttgcttatttatagtactaccttcctttcaaattataagactttataacattacccacattcatatatatgtcaatgaatctagacATatatatgtgcctagATTCattaacatctatatgaatatggacaatgctagaaaatcttataacctgaaacagagggagtagtatatttcatacagaaaaaaagtttaagcataagtaaatatcaattgttggatccatgaatatagaataataacaaccattatttatgaaagctaattgctagctagatacatcattttcatcgcagcctagctactagctaatatattcagctattccatcgtcctcttctgaaattgcagtaagcttggaggagtgaaagtaagaatccatgacttgtggaggtggcatgccattgccaatgccatccccatcgcagaaaaatggtctcagaggcacttgcaacgcatccacatccccttcgagcatctctattgcctcgctcatcgtcggccgatcgtgtgatttcatctgaatgcaccacagcccaacaaggcatagcttcctctctagctcatgcatgttagcaacattggatatctcatcaacttgttgatctgctatcagctggtcatacacccatgctgggtagtatgccctgcttgcatttgagtttgcatttggatctgcattccttctatctccagccatctcaagCAAcaacattccaaagctataaacatcggatttgtcggatataacgccaaagctccgggataccatctcaggagccatataacctactgttccccgtaaagccctatctgacacaaagctcttctcccttgggtacagttttgcgaggccgaaatcagcaacctttggaacaaagttatcatcaagaaggatgttgtctggcttgatatcaaagtgtagaatctgcatttcgcaccccttatgcaggtagttgatccctctagcaatgcccagagcaatctcattgagcttgtcccatgagaagcttctctcggatgagaagatgtacttgtttagagatcctctaggcatgtactcataaaccagagctcttctcatttcttcagagcagaaccccacaagacgcaccacgttgatgtgatggatcctgcctatggtggcaacttcactgatgaagtcttctccgttgcaattggagttgccatccaacatcttgatggcgacatgaacaccactcggcagaaacacacccttgtacacagacccatatcctccttggcccagcttgtctcgaaaatggcttgtgattgctatgatgtccgtgtaggcgtacctcttggggcctagcatatcttgcatccggaggaacttctcgactgcatcaattgcaatccttgttttccagtacttgcgagtaagaaaaatcatcacagccaacggtgcgaacacaaacctgcatagcactgcatacggaaaggctaattaatttgcaatgcaatatGTGgtgtgaccagctttgatagtgtatactgtagaattgagtggaacaaaaatgcaaaagttaattaattaccagcaatccacttgacaagacacaaggtgtatattatgaagagcttatggtaaagagaatgatcaacgccgcggatcaagtcgctgatggaaagacgcatgtcgaggtaataccgtctggATatgcctatcatgcatccccagaaacggaggtcaatagaaaggatgtcaatgatcctgcctttgatgcctactctggatctgggtaatgccttgtcatcgctaccagctaagctgcaagaccatttacagcatgcattggaaagagttaattaaacgggattgaaggagaagaactaaacaaaatcggcccttttcatatgagaaagtaaaggtttcgagattataaggaattaaggcgctcacctaacagactcgttgaggcaatctttgatgagaccataccaagtagtccaaggtcctccatatgtaggaaatttgacggcaaatccacccctcatggattttacaaaatctgcataactagtgtattcggacagattaacgatgttcctgccatcgccgataggagtcatggccaagtatccacaagaaggttcgatgtctttgatagatggtactaaagaagtaccaaaatatgagagcatataataaacgaaggaagaagtcgtggtcaggcaattcacgggctggtatttgctactactgttcgtaattagttcctgcgaacaattgacaaagctaacccacagaatcccattagcaagggccaagttccagctgtcgtgtgatcctcggataccattaaggcaaggcagctggtccgagcgaggaagagggcagctgctgtttgcatcatcctgcaggttggcatccacaacccaaaagatggaagcagtgtagttgatgctactcaaatagtatttccctgtgttgatccgaatggtggccttgccatcgtcatcgctgcagtctagctcgtacgcccagacgccgcacctgcgagggtcgcctcgccggcgaaaaggatacgatacgttttggagatggccgcaggagaaaggttggcactgatgccgtcgtccttggacatggacgacatgatgatttgcatccgctaccacaagtgcgagcacacacaggAcggtcgacaaagcagctgcttccattgcgttgcatacc

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CDS seq

atggaagcagctgctttgtcgaccgTcctgtgtgtgctcgcacttgtggtagcggatgcaaatcatcatgtcgtccatgtccaaggacgacggcatcagtgccaacctttctcctgcggccatctccaaaacgtatcgtatccttttcgccggcgaggcgaccctcgcaggtgcggcgtctgggcgtacgagctagactgcagcgatgacgatggcaaggccaccattcggatcaacacagggaaatactatttgagtagcatcaactacactgcttccatcttttgggttgtggatgccaacctgcaggatgatgcaaacagcagctgccctcttcctcgctcggaccagctgccttgccttaatggtatccgaggatcacacgacagctggaacttggcccttgctaatgggattctgtgggttagctttgtcaattgttcgcaggaactaattacgaacagtagtagcaaataccagcccgtgaattgcctgaccacgacttcttccttcgtttattatatgctctcatattttggtacttctttagtaccatctatcaaagacatcgaaccttcttgtggatacttggccatgactcctatcggcgatggcaggaacatcgttaatctgtccgaatacactagttatgcagattttgtaaaatccatgaggggtggatttgccgtcaaatttcctacatatggaggaccttggactacttggtatggtctcatcaaagattgcctcaacgagtctgttagcttagctggtagcgatgacaaggcattacccagatccagagtaggcatcaaaggcaggatcattgacatcctttctattgacctccgtttctggggatgcatgataggcatATccagacggtattacctcgacatgcgtctttccatcagcgacttgatccgcggcgttgatcattctctttaccataagctcttcataatatacaccttgtgtcttgtcaagtggattgctgtgctatgcaggtttgtgttcgcaccgttggctgtgatgatttttcttactcgcaagtactggaaaacaaggattgcaattgatgcagtcgagaagttcctccggatgcaagatatgctaggccccaagaggtacgcctacacggacatcatagcaatcacaagccattttcgagacaagctgggccaaggaggatatgggtctgtgtacaagggtgtgtttctgccgagtggtgttcatgtcgccatcaagatgttggatggcaactccaattgcaacggagaagacttcatcagtgaagttgccaccataggcaggatccatcacatcaacgtggtgcgtcttgtggggttctgctctgaagaaatgagaagagctctggtttatgagtacatgcctagaggatctctaaacaagtacatcttctcatccgagagaagcttctcatgggacaagctcaatgagattgctctgggcattgctagagggatcaactacctgcataaggggtgcgaaatgcagattctacactttgatatcaagccagacaacatccttcttgatgataactttgttccaaaggttgctgatttcggcctcgcaaaactgtacccaagggagaagagctttgtgtcagatagggctttacggggaacagtaggttatatggctcctgagatggtatcccggagctttggcgttatatccgacaaatccgatgtttatagctttggaatgttgTTGcttgagatggctggagatagaaggaatgcagatccaaatgcaaactcaaatgcaagcagggcatactacccagcatgggtgtatgaccagctgatagcagatcaacaagttgatgagatatccaatgttgctaacatgcatgagctagagaggaagctatgccttgttgggctgtggtgcattcagatgaaatcacacgatcggccgacgatgagcgaggcaatagagatgctcgaaggggatgtggatgcgttgcaagtgcctctgagaccatttttctgcgatggggatggcattggcaatggcatgccacctccacaagtcatggattcttactttcactcctccaagcttactgcaatttcagaagaggacgatggaatagctgaatatattagctacactgggagtaaatatgacacgctgcgggatcgatctcttgtgttgaagggaatggagagcaaataccacaactttattgtggcgttcagcaaggatgatttgtggactagcagcaacgatggaataaggaaccaagaacagggtgatccaggatggtgtcttgtccagagcatgataattgcataccaggtgcaccgcatgatggaggttgtGTcgaaagacggaacggatgctgcaggtggccggcggcatcatcggcgccatgactgccctccgttcacatgcggccatctcagtgacgtgtcgttcccgttccgccggcgaggtgacccaccggagtgcggtgttcaatcctacgagctaacttgtgcagacgacaaggctacaattcagatcgacaaggagacatactctgtaagtgacatcaactatggtgattctaccttgtgggtcgtcgatgccagcttcttggattcatgtagcagttgccttcttcctcgctggaacccccttcttcgtgatcccaggctccaggccaagtcacaccatatcattgaattggcacctccagtaggggttacctgggctagctttgtcaattgttcgcaggaaataaggaacagcagttggatgtacatgcccgtcgcttgcctgagcaccagcagatccttcgtttacgtgtttactggccaacaatctgcttatATtcagaaccttgagccttcctgtgggtacctggccacgactcctttgggtggcagcaagttgaacagcacgtcggcgctgcagaatgtaagctatcaggatgttgtaaagctaatgatgactggatttgccgttcgatttcctttcacagttagtgggtggaacttcaaagaatgcctggcactgtcaatccgccagacaggtacagggagcaaggaaaggattgcgaattttgctatcattgacttctatttctggtcgtgcttcctgcttggagatagatcacataataacctcatctacacgtacatgatggtcgacacagttccaatagccctactgattttgaagtggactgctgtagtgtgcagattcgtattggccccattagcagtattcatcttccttgcccacaagtattggagaaataagataacaattgatgcagtagagaagttcctccagatgcaactaactctcggcccaacaaggtatgcctacactgacctcactgcaattacaggtcacttcggtgagaagcttggccaaggaggctacggctcggtatacaaaggtgttctcccaggttatgttaatgtggctgtcaaggtgctggaaaatgccaactgcaacggtgaagagttcatcagtgaggtctccaccattggtaggatccaccacgtcaatgtagttcgtcttgttggttttTgttcagaggaactgaggagggcacttgtgtacaagtacatgccacgaggatctctagacaagtacattttctcatccaagagaagtttctcatgggacaaactcaatgagatagctttgggtattgctaggggGatcaactatcttcatcaaggttgcgatatgcagatactgcactttgacatcaagccacacaacatccttcttgatgacaactttgttccaaaggttgctgatttcggcctcgccaaactgtacccaagggacaacagttttgtgccgctcaacgccttaaggggaacaataggttatattgctcctgaaatgatatctcggagctttggcgttatatcaagcaaatccgatgtctacagctttggaatgctgctgctggagatggctggaggaagaaggaactcagacatgcatgcagagaactcaagtcaggcctactacccgtcgtgggtgtatgaccggctaatagagcaacagatgaagtctcacgatcggccgacgatgagcgaggtcatagagatgcttgaaggtggcgttgttggcctgcagatgcctccaagaccattcttctgtgatgatgaatccatgtcacctatgatgaattcttaccaattctcctctgggctaactgaaatcttagaggaggatgagtga

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Protein seq

MEAAALSTVLCVLALVVADANHHVVHVQGRRHQCQPFSCGHLQNVSYPFRRRGDPRRCGVWAYELDCSDDDGKATIRINTGKYYLSSINYTASIFWVVDANLQDDANSSCPLPRSDQLPCLNGIRGSHDSWNLALANGILWVSFVNCSQELITNSSSKYQPVNCLTTTSSFVYYMLSYFGTSLVPSIKDIEPSCGYLAMTPIGDGRNIVNLSEYTSYADFVKSMRGGFAVKFPTYGGPWTTWYGLIKDCLNESVSLAGSDDKALPRSRVGIKGRIIDILSIDLRFWGCMIGISRRYYLDMRLSISDLIRGVDHSLYHKLFIIYTLCLVKWIAVLCRFVFAPLAVMIFLTRKYWKTRIAIDAVEKFLRMQDMLGPKRYAYTDIIAITSHFRDKLGQGGYGSVYKGVFLPSGVHVAIKMLDGNSNCNGEDFISEVATIGRIHHINVVRLVGFCSEEMRRALVYEYMPRGSLNKYIFSSERSFSWDKLNEIALGIARGINYLHKGCEMQILHFDIKPDNILLDDNFVPKVADFGLAKLYPREKSFVSDRALRGTVGYMAPEMVSRSFGVISDKSDVYSFGMLLLEMAGDRRNADPNANSNASRAYYPAWVYDQLIADQQVDEISNVANMHELERKLCLVGLWCIQMKSHDRPTMSEAIEMLEGDVDALQVPLRPFFCDGDGIGNGMPPPQVMDSYFHSSKLTAISEEDDGIAEYISYTGSKYDTLRDRSLVLKGMESKYHNFIVAFSKDDLWTSSNDGIRNQEQGDPGWCLVQSMIIAYQVHRMMEVVSKDGTDAAGGRRHHRRHDCPPFTCGHLSDVSFPFRRRGDPPECGVQSYELTCADDKATIQIDKETYSVSDINYGDSTLWVVDASFLDSCSSCLLPRWNPLLRDPRLQAKSHHIIELAPPVGVTWASFVNCSQEIRNSSWMYMPVACLSTSRSFVYVFTGQQSAYIQNLEPSCGYLATTPLGGSKLNSTSALQNVSYQDVVKLMMTGFAVRFPFTVSGWNFKECLALSIRQTGTGSKERIANFAIIDFYFWSCFLLGDRSHNNLIYTYMMVDTVPIALLILKWTAVVCRFVLAPLAVFIFLAHKYWRNKITIDAVEKFLQMQLTLGPTRYAYTDLTAITGHFGEKLGQGGYGSVYKGVLPGYVNVAVKVLENANCNGEEFISEVSTIGRIHHVNVVRLVGFCSEELRRALVYKYMPRGSLDKYIFSSKRSFSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDNSFVPLNALRGTIGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSDMHAENSSQAYYPSWVYDRLIEQQMKSHDRPTMSEVIEMLEGGVVGLQMPPRPFFCDDESMSPMMNSYQFSSGLTEILEEDE

Function Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLima_01g0001050 OsLima_01g0001050.02 Chr01 714233 732573 - NAM
CDS seq

atgctgaagctggaaatattaactgtaaacagtgggcggcggcatcatcagattcagattcagcctgcgtgtcctacgttcacctgtggcgcccatctcaggaacgtgtcgtacccgttccgccggcgaggtgacccgccggagtgcggcgttgcatcgtacgagctgacttgcaccgacgacaaggctattattcagatcgacaacggaacgtaccttgtgaggggcatcaactgcaccgatgctaccttcagtgtcgtggacgccaacatgttggattcaagtaacagtacttgccctcttcctcgctggaatcgcattccttattattaccgaaggtacgggGttgtcgaagactcaagccgcaacatcgtccaagagctggtgccatcttattcgatcataaccgctgcttttgtgacttgttcgcgggaagtaacgaacaatgggatgtacatgcctgtcgcttgcttaagcaccaacagctccttcgtttacgtgctaactggctggttcgctgattttTatatcaagaatctcgagccttcttgtgggtacctggccatgactcctttgagcattggcggcctaccagtaagagcattgaatgcaagctatgcggatgttgtcaaacttatgagaggtggattcgccattcagtttccttacaaaattgatcgtttcgactactgcaagttgaaagacttcatggcacaatcatttcagttcattttggcgcccttagtagtattgacctttctggtgcacaagtattggaagaggaggatgataatcgatgcagtcgagaagtttctccggatgcaactgatgattggtccgacgaggtatgcctacactgacatcactgcaatcacagggcatttcagggagaagctcggccaaggaggctatggctctgtatataaaggtgttctactcccaggcaatgtccatgtggctgtcaaggtgctgggaaactccaattgtaatggagaagagttcatcagtgaagtctccaccattggcaggattcaccatgtcaatgtggttcgtttagtagggttttgtgcagaggaaatgaggagggcactggtgtacgagcacatgcctaatggatctctcgacaagttcatcttttcacatgacatgagattttcctgggacaagctcaacgagatcgcattgggcattgccagaggaataaactatttgcatcaggggtgtgagatgcagattctacattttgatatcaagccgcacaacatccttcttgacagcaatttcattccaaaagttgctgattttggccttgccaaactgtacccacgggataatagttttgtgcctgttagcgctgcacgaggaacaataggttatattgctcctgagatgatatctcggagctttggtgccatatctagcaaatctgacgtgtatagctttggaatgcttctgttggagatggttggagggcgaaggaactctaagcaggatatgtcgagctcaagccaagcgtattatccatcatgggtgtataatcagctggttcaacaagagttgggtgagatggtcactgcctttaatatgcatgagttggaaaagaagttgtgcattgttgggctacattgcattcagatgaagtctcatgatcggccaacaatgagtgaggtcattgagatgcttgacggtggtgctgatggtctgcgattgccttctaggccattcttctgtgatgacgaGcctatgccacatttggtgggttcttaccatttatcctctgggctaactgaaatctcggaggaggatgacatgcatcccctctctaccacaatgcaagcctttgttttcatctttgctgttcttgctcttgcaggagatgtcgaggggcggcaagggtgctatcctttctcctgtggacatctccagaacatttcccatcctttccgccggcgaggtgatccacaaaggtgcggtgttccgtcatatgagttagattgcagcgatagcaaggctaccattaggatcaacacagggacatactatgtaaccagcatcaactacactacttctgtcttctgggttgtggatgccagcctgaaagatacaaacagcagctgccctcttcctcgctcggatcagcttcctttcgtttcggggggtatccagggatcacatggcggctgggacctggcccttgaccctggacctggagctacatgggttagctttgtgaattgttcacaggcagtaaggaacaatagtgtgtacgttcctgttgattgcctgagcacaagctcttcgtttgtttatgtgtttggttcctggataatgcctccatctgtttttccaatcatcggaaaccttgagacttcatgtcgctaccttgccatgattcccttgggtggttgggactcgccattgccacataatgcaagcttttcagacatcgtcagatccatgaggaatggatttgctgttcattttcccataatacataggtggagtaggattgggcacatcaaggattgtctgatggggtcgattcggggatttcatgaagaaccattgtccaatcaaaccatcaaggatcagattgtggacatgctttttattgactttagtttctggtcctgcataattagaggagtgggcatgaaagattatttcgatatgccacaatacatgatggggatgcttcgtggaaaaatagaattttatggcggattcattgtacaatttgctttgtttgttttcaagttcgtgatagctccgttgacactattgaccttccttgccttcaagtattggaaaactagaataaaaatcgacgcagttgagaagtttttacgaatgcagctaatgcttggtccaacaaggtacgcctatacagacatcattgcaatgacaagccattttagagacaagttgggccagggtggctatggatccgtgttcaagggagtgatactgcctggtgatgtccatgttgccatcaaaatgctggccaactacaattgtaatggagaagaattcatcagcgaggtatccaccattggcagtatccatcatgtcaatgtagtacgtctagtggggtattgtgcagaggaaatgaggagagcacttgtgtatgagtacatgccccatggatctcttgacaggttcatcttctctcctgacaagagtctctcttgggacaagctcaatgagatcgcattgggcattgctagaggaataaactacttacatcaggggtgtgatatgcagattctacattttgatatcaagctgcacaacatccttcttgatagcaatttcgtcccaaaagttgccgattttggcctcgccaaactgtatccacaggataacagttttgtgccagttagcgctgcacgaggaacagtaggttatattgctcctgagatgatatctcggagctttggtgtcatatctagcaaatctgatgtttatagctttgggatgcttctgttggagatggctggagggcgaaggaactctaagcaggatatgtcgagctcaagccagtcatattatccatcttgggtgtataatcagctggttcaacaaaagatgggtgagattgccaatgccttcaatatgcatgagctggaaaagaagttgtgtgttgttggtctacattgcattcaaatgaagcctcctgatcgtccaacgatgagtgaggtcatagaaatgcttgaaggtgatgttgatggtctgcagctgccttcaaggccattcttctgcgatgatgaacccctgccattgctagtggattcttgccgtttctcctctgaactaactgaaatctcagaggaggatgagtga

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Protein seq

MLKLEILTVNSGRRHHQIQIQPACPTFTCGAHLRNVSYPFRRRGDPPECGVASYELTCTDDKAIIQIDNGTYLVRGINCTDATFSVVDANMLDSSNSTCPLPRWNRIPYYYRRYGVVEDSSRNIVQELVPSYSIITAAFVTCSREVTNNGMYMPVACLSTNSSFVYVLTGWFADFYIKNLEPSCGYLAMTPLSIGGLPVRALNASYADVVKLMRGGFAIQFPYKIDRFDYCKLKDFMAQSFQFILAPLVVLTFLVHKYWKRRMIIDAVEKFLRMQLMIGPTRYAYTDITAITGHFREKLGQGGYGSVYKGVLLPGNVHVAVKVLGNSNCNGEEFISEVSTIGRIHHVNVVRLVGFCAEEMRRALVYEHMPNGSLDKFIFSHDMRFSWDKLNEIALGIARGINYLHQGCEMQILHFDIKPHNILLDSNFIPKVADFGLAKLYPRDNSFVPVSAARGTIGYIAPEMISRSFGAISSKSDVYSFGMLLLEMVGGRRNSKQDMSSSSQAYYPSWVYNQLVQQELGEMVTAFNMHELEKKLCIVGLHCIQMKSHDRPTMSEVIEMLDGGADGLRLPSRPFFCDDEPMPHLVGSYHLSSGLTEISEEDDMHPLSTTMQAFVFIFAVLALAGDVEGRQGCYPFSCGHLQNISHPFRRRGDPQRCGVPSYELDCSDSKATIRINTGTYYVTSINYTTSVFWVVDASLKDTNSSCPLPRSDQLPFVSGGIQGSHGGWDLALDPGPGATWVSFVNCSQAVRNNSVYVPVDCLSTSSSFVYVFGSWIMPPSVFPIIGNLETSCRYLAMIPLGGWDSPLPHNASFSDIVRSMRNGFAVHFPIIHRWSRIGHIKDCLMGSIRGFHEEPLSNQTIKDQIVDMLFIDFSFWSCIIRGVGMKDYFDMPQYMMGMLRGKIEFYGGFIVQFALFVFKFVIAPLTLLTFLAFKYWKTRIKIDAVEKFLRMQLMLGPTRYAYTDIIAMTSHFRDKLGQGGYGSVFKGVILPGDVHVAIKMLANYNCNGEEFISEVSTIGSIHHVNVVRLVGYCAEEMRRALVYEYMPHGSLDRFIFSPDKSLSWDKLNEIALGIARGINYLHQGCDMQILHFDIKLHNILLDSNFVPKVADFGLAKLYPQDNSFVPVSAARGTVGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSKQDMSSSSQSYYPSWVYNQLVQQKMGEIANAFNMHELEKKLCVVGLHCIQMKPPDRPTMSEVIEMLEGDVDGLQLPSRPFFCDDEPLPLLVDSCRFSSELTEISEEDE

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Gene Transcript Chromosome Start End Strand Source
OsLima_01g0001050 OsLima_01g0001050.01 Chr01 732425 742519 - NAM
CDS seq

atggaagcagctgctttgtcgaccgTcctgtgtgtgctcgcacttgtggtagcggatgcaaatcatcatgtcgtccatgtccaaggacgacggcatcagtgccaacctttctcctgcggccatctccaaaacgtatcgtatccttttcgccggcgaggcgaccctcgcaggtgcggcgtctgggcgtacgagctagactgcagcgatgacgatggcaaggccaccattcggatcaacacagggaaatactatttgagtagcatcaactacactgcttccatcttttgggttgtggatgccaacctgcaggatgatgcaaacagcagctgccctcttcctcgctcggaccagctgccttgccttaatggtatccgaggatcacacgacagctggaacttggcccttgctaatgggattctgtgggttagctttgtcaattgttcgcaggaactaattacgaacagtagtagcaaataccagcccgtgaattgcctgaccacgacttcttccttcgtttattatatgctctcatattttggtacttctttagtaccatctatcaaagacatcgaaccttcttgtggatacttggccatgactcctatcggcgatggcaggaacatcgttaatctgtccgaatacactagttatgcagattttgtaaaatccatgaggggtggatttgccgtcaaatttcctacatatggaggaccttggactacttggtatggtctcatcaaagattgcctcaacgagtctgttagcttagctggtagcgatgacaaggcattacccagatccagagtaggcatcaaaggcaggatcattgacatcctttctattgacctccgtttctggggatgcatgataggcatATccagacggtattacctcgacatgcgtctttccatcagcgacttgatccgcggcgttgatcattctctttaccataagctcttcataatatacaccttgtgtcttgtcaagtggattgctgtgctatgcaggtttgtgttcgcaccgttggctgtgatgatttttcttactcgcaagtactggaaaacaaggattgcaattgatgcagtcgagaagttcctccggatgcaagatatgctaggccccaagaggtacgcctacacggacatcatagcaatcacaagccattttcgagacaagctgggccaaggaggatatgggtctgtgtacaagggtgtgtttctgccgagtggtgttcatgtcgccatcaagatgttggatggcaactccaattgcaacggagaagacttcatcagtgaagttgccaccataggcaggatccatcacatcaacgtggtgcgtcttgtggggttctgctctgaagaaatgagaagagctctggtttatgagtacatgcctagaggatctctaaacaagtacatcttctcatccgagagaagcttctcatgggacaagctcaatgagattgctctgggcattgctagagggatcaactacctgcataaggggtgcgaaatgcagattctacactttgatatcaagccagacaacatccttcttgatgataactttgttccaaaggttgctgatttcggcctcgcaaaactgtacccaagggagaagagctttgtgtcagatagggctttacggggaacagtaggttatatggctcctgagatggtatcccggagctttggcgttatatccgacaaatccgatgtttatagctttggaatgttgTTGcttgagatggctggagatagaaggaatgcagatccaaatgcaaactcaaatgcaagcagggcatactacccagcatgggtgtatgaccagctgatagcagatcaacaagttgatgagatatccaatgttgctaacatgcatgagctagagaggaagctatgccttgttgggctgtggtgcattcagatgaaatcacacgatcggccgacgatgagcgaggcaatagagatgctcgaaggggatgtggatgcgttgcaagtgcctctgagaccatttttctgcgatggggatggcattggcaatggcatgccacctccacaagtcatggattcttactttcactcctccaagcttactgcaatttcagaagaggacgatggaatagctgaatatattagctacactgggagtaaatatgacacgctgcgggatcgatctcttgtgttgaagggaatggagagcaaataccacaactttattgtggcgttcagcaaggatgatttgtggactagcagcaacgatggaataaggaaccaagaacagggtgatccaggatggtgtcttgtccagagcatgataattgcataccaggtgcaccgcatgatggaggttgtGTcgaaagacggaacggatgctgcaggtggccggcggcatcatcggcgccatgactgccctccgttcacatgcggccatctcagtgacgtgtcgttcccgttccgccggcgaggtgacccaccggagtgcggtgttcaatcctacgagctaacttgtgcagacgacaaggctacaattcagatcgacaaggagacatactctgtaagtgacatcaactatggtgattctaccttgtgggtcgtcgatgccagcttcttggattcatgtagcagttgccttcttcctcgctggaacccccttcttcgtgatcccaggctccaggccaagtcacaccatatcattgaattggcacctccagtaggggttacctgggctagctttgtcaattgttcgcaggaaataaggaacagcagttggatgtacatgcccgtcgcttgcctgagcaccagcagatccttcgtttacgtgtttactggccaacaatctgcttatATtcagaaccttgagccttcctgtgggtacctggccacgactcctttgggtggcagcaagttgaacagcacgtcggcgctgcagaatgtaagctatcaggatgttgtaaagctaatgatgactggatttgccgttcgatttcctttcacagttagtgggtggaacttcaaagaatgcctggcactgtcaatccgccagacaggtacagggagcaaggaaaggattgcgaattttgctatcattgacttctatttctggtcgtgcttcctgcttggagatagatcacataataacctcatctacacgtacatgatggtcgacacagttccaatagccctactgattttgaagtggactgctgtagtgtgcagattcgtattggccccattagcagtattcatcttccttgcccacaagtattggagaaataagataacaattgatgcagtagagaagttcctccagatgcaactaactctcggcccaacaaggtatgcctacactgacctcactgcaattacaggtcacttcggtgagaagcttggccaaggaggctacggctcggtatacaaaggtgttctcccaggttatgttaatgtggctgtcaaggtgctggaaaatgccaactgcaacggtgaagagttcatcagtgaggtctccaccattggtaggatccaccacgtcaatgtagttcgtcttgttggttttTgttcagaggaactgaggagggcacttgtgtacaagtacatgccacgaggatctctagacaagtacattttctcatccaagagaagtttctcatgggacaaactcaatgagatagctttgggtattgctaggggGatcaactatcttcatcaaggttgcgatatgcagatactgcactttgacatcaagccacacaacatccttcttgatgacaactttgttccaaaggttgctgatttcggcctcgccaaactgtacccaagggacaacagttttgtgccgctcaacgccttaaggggaacaataggttatattgctcctgaaatgatatctcggagctttggcgttatatcaagcaaatccgatgtctacagctttggaatgctgctgctggagatggctggaggaagaaggaactcagacatgcatgcagagaactcaagtcaggcctactacccgtcgtgggtgtatgaccggctaatagagcaacagatgaagtctcacgatcggccgacgatgagcgaggtcatagagatgcttgaaggtggcgttgttggcctgcagatgcctccaagaccattcttctgtgatgatgaatccatgtcacctatgatgaattcttaccaattctcctctgggctaactgaaatcttagaggaggatgagtga

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Protein seq

MEAAALSTVLCVLALVVADANHHVVHVQGRRHQCQPFSCGHLQNVSYPFRRRGDPRRCGVWAYELDCSDDDGKATIRINTGKYYLSSINYTASIFWVVDANLQDDANSSCPLPRSDQLPCLNGIRGSHDSWNLALANGILWVSFVNCSQELITNSSSKYQPVNCLTTTSSFVYYMLSYFGTSLVPSIKDIEPSCGYLAMTPIGDGRNIVNLSEYTSYADFVKSMRGGFAVKFPTYGGPWTTWYGLIKDCLNESVSLAGSDDKALPRSRVGIKGRIIDILSIDLRFWGCMIGISRRYYLDMRLSISDLIRGVDHSLYHKLFIIYTLCLVKWIAVLCRFVFAPLAVMIFLTRKYWKTRIAIDAVEKFLRMQDMLGPKRYAYTDIIAITSHFRDKLGQGGYGSVYKGVFLPSGVHVAIKMLDGNSNCNGEDFISEVATIGRIHHINVVRLVGFCSEEMRRALVYEYMPRGSLNKYIFSSERSFSWDKLNEIALGIARGINYLHKGCEMQILHFDIKPDNILLDDNFVPKVADFGLAKLYPREKSFVSDRALRGTVGYMAPEMVSRSFGVISDKSDVYSFGMLLLEMAGDRRNADPNANSNASRAYYPAWVYDQLIADQQVDEISNVANMHELERKLCLVGLWCIQMKSHDRPTMSEAIEMLEGDVDALQVPLRPFFCDGDGIGNGMPPPQVMDSYFHSSKLTAISEEDDGIAEYISYTGSKYDTLRDRSLVLKGMESKYHNFIVAFSKDDLWTSSNDGIRNQEQGDPGWCLVQSMIIAYQVHRMMEVVSKDGTDAAGGRRHHRRHDCPPFTCGHLSDVSFPFRRRGDPPECGVQSYELTCADDKATIQIDKETYSVSDINYGDSTLWVVDASFLDSCSSCLLPRWNPLLRDPRLQAKSHHIIELAPPVGVTWASFVNCSQEIRNSSWMYMPVACLSTSRSFVYVFTGQQSAYIQNLEPSCGYLATTPLGGSKLNSTSALQNVSYQDVVKLMMTGFAVRFPFTVSGWNFKECLALSIRQTGTGSKERIANFAIIDFYFWSCFLLGDRSHNNLIYTYMMVDTVPIALLILKWTAVVCRFVLAPLAVFIFLAHKYWRNKITIDAVEKFLQMQLTLGPTRYAYTDLTAITGHFGEKLGQGGYGSVYKGVLPGYVNVAVKVLENANCNGEEFISEVSTIGRIHHVNVVRLVGFCSEELRRALVYKYMPRGSLDKYIFSSKRSFSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDNSFVPLNALRGTIGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSDMHAENSSQAYYPSWVYDRLIEQQMKSHDRPTMSEVIEMLEGGVVGLQMPPRPFFCDDESMSPMMNSYQFSSGLTEILEEDE

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.235434 0.054611 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_01g0114100 RBH 0.327124 0.000000 1.199296
Nipponbare | IRGSP 1.0 | MSU LOC_Os01g02680 RBH 0.0 0.000000 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os01g0114100 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_01g0001210 SBH 0.048626 0.000000 0.000000
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_01g0001070 RBH 0.160955 0.171025 0.792215
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_01g0001230 SBH 0.875923 0.000000 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_01g0001110 SBH 0.051644 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_01g0001240 RBH 11.364197 1.983415 9.245715
Minghui 63 | MH63RS3 | HZAU OsMH63_01G0014900 RBH 0 0 0
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_01g0001080 RBH 0.000000 0.000000 0.000000
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_01G0013800 SBH 4.878753 11.655432 16.026512
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_01g0001110 RBH 0.0 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_01g0001130 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_01g0001130 RBH 0.287462 2.850632 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_01g0001250 RBH 0.333055 0.141762 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_01g0001160 RBH 0.084394 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_01G001240 RBH 0.900158 1.196784 0.692669
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_01g0001160 SBH 0.000000 0.000000 0.000000
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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