Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLiXu_01g0001020 | OGI:01002200 | 4/16 | LIU XU | Os125827RS1 | Gramene(+IsoSeq) | Chr01:672168-672515 | ||||||||
| Gene Symbol | RLCK9, OsRLCK9 | ||||||||||
| DNA seq | atgacagcatcgaagaaggggactgaggagacgatggggaacaaccagatgattatacaccaaagccgggtggcttctccttgctgcgtgttggtccgggaatcaaaatgaggtttatattccgcagtggatatttgagaaaataatcactgggcaagaactggaagcaaccagggaaaagactcaataaaactggccattgtggcgttatggtgcatacagtggaaccccaagaatcagccatccatgaaaaaggcggtcaacatgttaacaggaagcttgaagagtttagccatgccccctaaaccttttgtttcatctctgggccaccctaggccacaaatctag |
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| CDS seq | atgacagcatcgaagaaggggactgaggagacgatggggaacaaccagatgattatacaccaaagccggtggaaccccaagaatcagccatccatgaaaaaggcggtcaacatgttaacaggaagcttgaagagtttagccatgccccctaaaccttttgtttcatctctgggccaccctaggccacaaatctag |
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| Protein seq | MTASKKGTEETMGNNQMIIHQSRWNPKNQPSMKKAVNMLTGSLKSLAMPPKPFVSSLGHPRPQI |
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| Function | Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLiXu_01g0001020 | OsLiXu_01g0001020.01 | Chr01 | 672168 | 672515 | + | NAM | ||
| CDS seq | atgacagcatcgaagaaggggactgaggagacgatggggaacaaccagatgattatacaccaaagccggtggaaccccaagaatcagccatccatgaaaaaggcggtcaacatgttaacaggaagcttgaagagtttagccatgccccctaaaccttttgtttcatctctgggccaccctaggccacaaatctag |
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| Protein seq | MTASKKGTEETMGNNQMIIHQSRWNPKNQPSMKKAVNMLTGSLKSLAMPPKPFVSSLGHPRPQI |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0114900 | SBH | 0.000000 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g02460 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0114900 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0001370 | SBH | 0.0 | 0.0 | 0.664108 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0001030 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0001270 | SBH | 0.045626 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0001020 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0016900 | SBH | 0 | 0 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0001240 | SBH | 0.065420 | 0.0 | 0.109484 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0014500 | SBH | 0.0265545 | 0.0553125 | 0.153599 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0001420 | SBH | 0.074193 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0001010 | RBH | 0.0 | 19.521416 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_Ung0073300 | SBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0000990 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G001430 | SBH | 0.000000 | 0.000000 | 0.208976 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0001270 | SBH | 0.0 | 0.0 | 0.0 |
