Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_11g0019830 | OGI:11063750 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr11:25655919-25659366 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ctattgttcttttgataattcgttgtactcatctatcaccacactaatgttggaggaatcagcctttcgaatcttgcttgccagtcctttgatctgagagaccttctctttcgcatcttcaggtgcctggctgctaaaggtcagaaatacctgttggagacttgaaaggttttccaggccgtatacacactcaatgattctgaacctcagctcaagcctctgaagctctggcattgccccttcgaggaagctcaggggtggtagcactggtgctgtaaaacacagcaacctcagctttgtaaaccccccatctggcacaaagattttacctcctgactccaatgtattcttatgcacagttttgaggatatttgaaatatcctttgctgcatcaagtgaaaaaatgagagagaaaagctcaggaagcctactaagagtcaccaaagtatctgtcgtaagtgaagtcaaggacagagtaagcttctcaaggttgtgtaagcggtcaatccattctggcactttaaacaagctgccagaaagctcaagggtgtaaaggtgttctggttgtgcttgtgaagaactcagtgatctgttaaggaagcctgtgaaactgtcatcaattgcaagaaacttgagagaacaactgctcaaatgctcaatagcagagagcagcaattcatcatcttttgcttggaaattaacaagcctgtaaatggcaagtttcttaaggttggtgagcttctccaaagctgctagcggacgcaactgttttggcatatccaccttgctgccttccttatgggtaccttgcaagcctgtgatatctccatccttggcatcggtggttgaagcatctctgatgacttccataacttgtgcctgctccctagctgctttcttggttgaccttccagagatctcaatcccagacagtgtctgtatagttgtcatctttgtgattccttcagttaatctcaacgcccttcgcttggttttattgccagccaatagatggaccattcgttgaagcctctccactgatgcaggcaagtttgtgacatctgtgtcccttatgtcaagtacctccaaatactccagcctgcctattttcttcggtatcttgtggatttccgtcccacgcaagcttaggtacttcatctgatgcatattacatattttcttgagctggtttgatgacaagtccttgcatccttcaagatccaacacctgcagtatctggaatttgagcatagtagaatgaagagctttgaaactctccaatacagtcaaggatcggacatgcgataacttcatcctctctactagcacagtttcttgccgatcacttttatggacagacaaccgtcgcactttgtagcttggaaatggtgtctgccagtggctaccaataacagtgatgaaattctcatcaccagatttggagacaatgtactcaaggaccatgtcatgaatttgacagctcttcaccttcccattgctgctgttgttgataggccgaatcaagttcctgccaatgagttcattgaagttgtcttctgcaacttcctctgccgtctgcccatgtttctcagtaacaaatccttcagcaatccatcttcttatcaaacgtttcctgctaatattgcggcccttcggaaatgtactcaagtagagcaaacatgtcttaagatcaggtggcagatttttgtagcagtggttaattatctgcactacttctgtggtaagattgtttcccaactctgcacttaaagcctcatctacatcaaccaaatgctgatccaatgtcaggtcaatcttcgatttcagtttactagcaatcagccctgctactactacaatggccaaaggcagacctccacatatcctcatgataatgctaacgttaatgggtctactgggacacagatcattagcagatattatctgaagaaacaaattgtaggagttctctagatcgagctgtttgagcttgtgcacatgaccattttgacggcggcaggcttcagctacagagttaaacctggtagtcacaattacgcaactacccttatcattcttaggtaatgaatccctaatactttcccatgctgatacagaccatatgtcatcaatcaagatatggtacctgttcaagaattgtttagaagtaagtagttgtaaatagagtgatttcatggtacttgagaaggtaccgtaaagttaatctataaataacattctatactaccttcttcgtttaatatttcaacttaaaagaacgaagggagtagtattcatcccaggcacaaaacatattgtcaaaccttttcaacttgggtatcaatattttttttctattctgcataaagttattggattttataaatatatacaataaaatttctgttcaaaagttgcggtttgtagaccatttgtatccgaaacgactgttacctgtgaacagaggaagtaaccattatccaaatcagtaactatcataattcaaatttggtattgctatttcattactaaaaacttgtgaaggaatgaaataaatatgacaaagccaagatctatacctcttgccatgtagttgatcagctagcttcttcttgagcgcttcaactccccattcctcaattccgtggagagcatcctgagaagcactgacctgcttctgatggaactggctgactaggcttctcaaaactgttgggagatgaaacttctgcgacgcgagcatgaacgctctggaatcaaactcgtctccaaacttgcggtaaaatgacattgcgagtgtggttttgccaagcccacccgatccgacgatggcaaggtaactgatttgactctgctgctggccgttctgcttggagaccatgaaccatctttgaaggtcgttcatggcgtcgtccatgcctacaggttcaacggtgccaatcagccgggggagaggagctggatggtctctgggagagccggagttgttgttgctgccaccatttgcgtttgctgggaggttctccaccccgtaccttgtgcgccgttcgctgacatgctgcgcgcggcgcttgaggttgccgatgtcggcggcgatgcagcggcgctggtacagcgtggtgagcaggtaccacgtcctcttgagggagacaactgtgccggtcccgcggggctcgccgccgaggcggtggcggacgtcgtcgacgcagtcctcgatgtcgtaggcgacctcgcgcacctgcttcatccagtcctgacgctgctcgtcgtgggcgacgtcccgcttgagcctgctgaggaaggcctgcatgctggcgagctcgtcgttgatgtactggatgtcgtcgcggacgccggagatgagggtgtactcctgcgccaggaggctgcccagcttgctgacgagggacttcacggcgccgctcgacgcgccgaccaccagatccat
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| CDS seq | atggatctggtggtcggcgcgtcgagcggcgccgtgaagtccctcgtcagcaagctgggcagcctcctggcgcaggagtacaccctcatctccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcctcagcaggctcaagcgggacgtcgcccacgacgagcagcgtcaggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgacgtccgccaccgcctcggcggcgagccccgcgggaccggcacagttgtctccctcaagaggacgtggtacctgctcaccacgctgtaccagcgccgctgcatcgccgccgacatcggcaacctcaagcgccgcgcgcagcatgtcagcgaacggcgcacaaggtacggggtggagaacctcccagcaaacgcaaatggtggcagcaacaacaactccggctctcccagagaccatccagctcctctcccccggctgattggcaccgttgaacctgtaggcatggacgacgccatgaacgaccttcaaagatggttcatggtctccaagcagaacggccagcagcagagtcaaatcagttaccttgccatcgtcggatcgggtgggcttggcaaaaccacactcgcaatgtcattttaccgcaagtttggagacgagtttgattccagagcgttcatgctcgcgtcgcagaagtttcatctcccaacagttttgagaagcctagtcagccagttccatcagaagcaggtcagtgcttctcaggatgctctccacggaattgaggaatggggagttgaagcgctcaagaagaagctagctgatcaactacatggcaagaggtttaactctgtagctgaagcctgccgccgtcaaaatggtcatgtgcacaagctcaaacagctcgatctagagaactcctacaatttgtttcttcagataatatctgctaatgatctgtgtcccagtagacccattaacgttagcattatcatgaggatatgtggaggtctgcctttggccattgtagtagtagcagggctgattgctagtaaactgaaatcgaagattgacctgacattggatcagcatttggttgatgtagatgaggctttaagtgcagagttgggaaacaatcttaccacagaagtagtgcagataattaaccactgctacaaaaatctgccacctgatcttaagacatgtttgctctacttgagtacatttccgaagggccgcaatattagcaggaaacgtttgataagaagatggattgctgaaggatttgttactgagaaacatgggcagacggcagaggaagttgcagaagacaacttcaatgaactcattggcaggaacttgattcggcctatcaacaacagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattgtctccaaatctggtgatgagaatttcatcactgttattggtagccactggcagacaccatttccaagctacaaagtgcgacggttgtctgtccataaaagtgatcggcaagaaactgtgctagtagagaggatgaagttatcgcatgtccgatccttgactgtattggagagtttcaaagctcttcattctactatgctcaaattccagatactgcaggtgttggatcttgaaggatgcaaggacttgtcatcaaaccagctcaagaaaatatgtaatatgcatcagatgaagtacctaagcttgcgtgggacggaaatccacaagataccgaagaaaataggcaggctggagtatttggaggtacttgacataagggacacagatgtcacaaacttgcctgcatcagtggagaggcttcaacgaatggtccatctattggctggcaataaaaccaagcgaagggcgttgagattaactgaaggaatcacaaagatgacaactatacagacactgtctgggattgagatctctggaaggtcaaccaagaaagcagctagggagcaggcacaagttatggaagtcatcagagatgcttcaaccaccgatgccaaggatggagatatcacaggcttgcaaggtacccataaggaaggcagcaaggtggatatgccaaaacagttgcgtccgctagcagctttggagaagctcaccaaccttaagaaacttgccatttacaggcttgttaatttccaagcaaaagatgatgaattgctgctctctgctattgagcatttgagcagttgttctctcaagtttcttgcaattgatgacagtttcacaggcttccttaacagatcactgagttcttcacaagcacaaccagaacacctttacacccttgagctttctggcagcttgtttaaagtgccagaatggattgaccgcttacacaaccttgagaagcttactctgtccttgacttcacttacgacagatactttggtgactcttagtaggcttcctgagcttttctctctcattttttcacttgatgcagcaaaggatatttcaaatatcctcaaaactgtgcataagaatacattggagtcaggaggtaaaatctttgtgccagatggggggtttacaaagctgaggttgctgtgttttacagcaccagtgctaccacccctgagcttcctcgaaggggcaatgccagagcttcagaggcttgagctgaggttcagaatcattgagtgtgtatacggcctggaaaacctttcaagtctccaacaggtatttctgacctttagcagccaggcacctgaagatgcgaaagagaaggtctctcagatcaaaggactggcaagcaagattcgaaaggctgattcctccaacattagtgtggtgatagatgagtacaacgaattatcaaaagaacaatag
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| Protein seq | MDLVVGASSGAVKSLVSKLGSLLAQEYTLISGVRDDIQYINDELASMQAFLSRLKRDVAHDEQRQDWMKQVREVAYDIEDCVDDVRHRLGGEPRGTGTVVSLKRTWYLLTTLYQRRCIAADIGNLKRRAQHVSERRTRYGVENLPANANGGSNNNSGSPRDHPAPLPRLIGTVEPVGMDDAMNDLQRWFMVSKQNGQQQSQISYLAIVGSGGLGKTTLAMSFYRKFGDEFDSRAFMLASQKFHLPTVLRSLVSQFHQKQVSASQDALHGIEEWGVEALKKKLADQLHGKRFNSVAEACRRQNGHVHKLKQLDLENSYNLFLQIISANDLCPSRPINVSIIMRICGGLPLAIVVVAGLIASKLKSKIDLTLDQHLVDVDEALSAELGNNLTTEVVQIINHCYKNLPPDLKTCLLYLSTFPKGRNISRKRLIRRWIAEGFVTEKHGQTAEEVAEDNFNELIGRNLIRPINNSSNGKVKSCQIHDMVLEYIVSKSGDENFITVIGSHWQTPFPSYKVRRLSVHKSDRQETVLVERMKLSHVRSLTVLESFKALHSTMLKFQILQVLDLEGCKDLSSNQLKKICNMHQMKYLSLRGTEIHKIPKKIGRLEYLEVLDIRDTDVTNLPASVERLQRMVHLLAGNKTKRRALRLTEGITKMTTIQTLSGIEISGRSTKKAAREQAQVMEVIRDASTTDAKDGDITGLQGTHKEGSKVDMPKQLRPLAALEKLTNLKKLAIYRLVNFQAKDDELLLSAIEHLSSCSLKFLAIDDSFTGFLNRSLSSSQAQPEHLYTLELSGSLFKVPEWIDRLHNLEKLTLSLTSLTTDTLVTLSRLPELFSLIFSLDAAKDISNILKTVHKNTLESGGKIFVPDGGFTKLRLLCFTAPVLPPLSFLEGAMPELQRLELRFRIIECVYGLENLSSLQQVFLTFSSQAPEDAKEKVSQIKGLASKIRKADSSNISVVIDEYNELSKEQ |
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| Function | Disease resistance protein Piks-2 [UniProtKB/Swiss-Prot:P0DO10] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0019830 | OsLaMu_11g0019830.01 | Chr11 | 25655919 | 25659366 | - | NAM | ||
| CDS seq | atggatctggtggtcggcgcgtcgagcggcgccgtgaagtccctcgtcagcaagctgggcagcctcctggcgcaggagtacaccctcatctccggcgtccgcgacgacatccagtacatcaacgacgagctcgccagcatgcaggccttcctcagcaggctcaagcgggacgtcgcccacgacgagcagcgtcaggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgacgtccgccaccgcctcggcggcgagccccgcgggaccggcacagttgtctccctcaagaggacgtggtacctgctcaccacgctgtaccagcgccgctgcatcgccgccgacatcggcaacctcaagcgccgcgcgcagcatgtcagcgaacggcgcacaaggtacggggtggagaacctcccagcaaacgcaaatggtggcagcaacaacaactccggctctcccagagaccatccagctcctctcccccggctgattggcaccgttgaacctgtaggcatggacgacgccatgaacgaccttcaaagatggttcatggtctccaagcagaacggccagcagcagagtcaaatcagttaccttgccatcgtcggatcgggtgggcttggcaaaaccacactcgcaatgtcattttaccgcaagtttggagacgagtttgattccagagcgttcatgctcgcgtcgcagaagtttcatctcccaacagttttgagaagcctagtcagccagttccatcagaagcaggtcagtgcttctcaggatgctctccacggaattgaggaatggggagttgaagcgctcaagaagaagctagctgatcaactacatggcaagaggtttaactctgtagctgaagcctgccgccgtcaaaatggtcatgtgcacaagctcaaacagctcgatctagagaactcctacaatttgtttcttcagataatatctgctaatgatctgtgtcccagtagacccattaacgttagcattatcatgaggatatgtggaggtctgcctttggccattgtagtagtagcagggctgattgctagtaaactgaaatcgaagattgacctgacattggatcagcatttggttgatgtagatgaggctttaagtgcagagttgggaaacaatcttaccacagaagtagtgcagataattaaccactgctacaaaaatctgccacctgatcttaagacatgtttgctctacttgagtacatttccgaagggccgcaatattagcaggaaacgtttgataagaagatggattgctgaaggatttgttactgagaaacatgggcagacggcagaggaagttgcagaagacaacttcaatgaactcattggcaggaacttgattcggcctatcaacaacagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattgtctccaaatctggtgatgagaatttcatcactgttattggtagccactggcagacaccatttccaagctacaaagtgcgacggttgtctgtccataaaagtgatcggcaagaaactgtgctagtagagaggatgaagttatcgcatgtccgatccttgactgtattggagagtttcaaagctcttcattctactatgctcaaattccagatactgcaggtgttggatcttgaaggatgcaaggacttgtcatcaaaccagctcaagaaaatatgtaatatgcatcagatgaagtacctaagcttgcgtgggacggaaatccacaagataccgaagaaaataggcaggctggagtatttggaggtacttgacataagggacacagatgtcacaaacttgcctgcatcagtggagaggcttcaacgaatggtccatctattggctggcaataaaaccaagcgaagggcgttgagattaactgaaggaatcacaaagatgacaactatacagacactgtctgggattgagatctctggaaggtcaaccaagaaagcagctagggagcaggcacaagttatggaagtcatcagagatgcttcaaccaccgatgccaaggatggagatatcacaggcttgcaaggtacccataaggaaggcagcaaggtggatatgccaaaacagttgcgtccgctagcagctttggagaagctcaccaaccttaagaaacttgccatttacaggcttgttaatttccaagcaaaagatgatgaattgctgctctctgctattgagcatttgagcagttgttctctcaagtttcttgcaattgatgacagtttcacaggcttccttaacagatcactgagttcttcacaagcacaaccagaacacctttacacccttgagctttctggcagcttgtttaaagtgccagaatggattgaccgcttacacaaccttgagaagcttactctgtccttgacttcacttacgacagatactttggtgactcttagtaggcttcctgagcttttctctctcattttttcacttgatgcagcaaaggatatttcaaatatcctcaaaactgtgcataagaatacattggagtcaggaggtaaaatctttgtgccagatggggggtttacaaagctgaggttgctgtgttttacagcaccagtgctaccacccctgagcttcctcgaaggggcaatgccagagcttcagaggcttgagctgaggttcagaatcattgagtgtgtatacggcctggaaaacctttcaagtctccaacaggtatttctgacctttagcagccaggcacctgaagatgcgaaagagaaggtctctcagatcaaaggactggcaagcaagattcgaaaggctgattcctccaacattagtgtggtgatagatgagtacaacgaattatcaaaagaacaatag
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| Protein seq | MDLVVGASSGAVKSLVSKLGSLLAQEYTLISGVRDDIQYINDELASMQAFLSRLKRDVAHDEQRQDWMKQVREVAYDIEDCVDDVRHRLGGEPRGTGTVVSLKRTWYLLTTLYQRRCIAADIGNLKRRAQHVSERRTRYGVENLPANANGGSNNNSGSPRDHPAPLPRLIGTVEPVGMDDAMNDLQRWFMVSKQNGQQQSQISYLAIVGSGGLGKTTLAMSFYRKFGDEFDSRAFMLASQKFHLPTVLRSLVSQFHQKQVSASQDALHGIEEWGVEALKKKLADQLHGKRFNSVAEACRRQNGHVHKLKQLDLENSYNLFLQIISANDLCPSRPINVSIIMRICGGLPLAIVVVAGLIASKLKSKIDLTLDQHLVDVDEALSAELGNNLTTEVVQIINHCYKNLPPDLKTCLLYLSTFPKGRNISRKRLIRRWIAEGFVTEKHGQTAEEVAEDNFNELIGRNLIRPINNSSNGKVKSCQIHDMVLEYIVSKSGDENFITVIGSHWQTPFPSYKVRRLSVHKSDRQETVLVERMKLSHVRSLTVLESFKALHSTMLKFQILQVLDLEGCKDLSSNQLKKICNMHQMKYLSLRGTEIHKIPKKIGRLEYLEVLDIRDTDVTNLPASVERLQRMVHLLAGNKTKRRALRLTEGITKMTTIQTLSGIEISGRSTKKAAREQAQVMEVIRDASTTDAKDGDITGLQGTHKEGSKVDMPKQLRPLAALEKLTNLKKLAIYRLVNFQAKDDELLLSAIEHLSSCSLKFLAIDDSFTGFLNRSLSSSQAQPEHLYTLELSGSLFKVPEWIDRLHNLEKLTLSLTSLTTDTLVTLSRLPELFSLIFSLDAAKDISNILKTVHKNTLESGGKIFVPDGGFTKLRLLCFTAPVLPPLSFLEGAMPELQRLELRFRIIECVYGLENLSSLQQVFLTFSSQAPEDAKEKVSQIKGLASKIRKADSSNISVVIDEYNELSKEQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 2.938492 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0606500 | RBH | 1.490915 | 1.616948 | 0.182259 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g39320 | RBH | 0.968592 | 1.189013 | 0.135217 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0606500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0019980 | RBH | 0.060425 | 0.575372 | 0.355788 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0020130 | RBH | 0.192725 | 0.349838 | 1.851197 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0019900 | RBH | 0.503698 | 2.298413 | 5.397541 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0019280 | SBH | 0.000000 | 0.042257 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0019820 | SBH | 1.352501 | 0.997465 | 2.008775 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0359000 | RBH | 3.631289 | 6.2978845 | 3.2944695 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0020440 | RBH | 0.177432 | 0.000000 | 0.338771 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0374200 | RBH | 1.109171 | 2.394498 | 0.3459235 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0020270 | RBH | 0.134517 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0020290 | SBH | 0.023861 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0019910 | RBH | 0.000000 | 9.613651 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0019720 | RBH | 0.872202 | 0.0 | 0.743476 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0019540 | RBH | 0.633373 | 2.948855 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G019760 | RBH | 0.053878 | 0.764113 | 0.759471 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0020150 | RBH | 0.750866 | 5.503851 | 2.506739 |
