Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_11g0007980 | OGI:11019820 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr11:6877254-6886954 | ||||||||
| Gene Symbol | rNBS17, YR5, - | ||||||||||
| DNA seq | ccaaacagagagattaatatattggcaacagtacatgcaaataaggtcttataaaaaaatggatgtgctcttacatacaatgaatatcaaagtaaatgaaactacacataatgtacagaggcaccgcgaacgcaaaaaagctaggaatgataggcaactcatcggaaatcgacacctgctgcaaacagagggggaaaaaaactacaaacggcaccagccagccgcatctaaagttctaaacacgaatctctggaacatgctgcatcttctgatgcattctgtttttgtgccattgagttttgaagtccctgtgcaggtacagaagccagagcttcttcagggtccgaagggactcaatgccctcagggactatatccagctttgagagtgacacaacgtacaaaccttcaatggatggaagtgccccatccatgatctttagctggttcacattgggcatgtgctttaagacaagtgtcttcaggtggggaaaagactgtgtagaaagaaccaaaatgtttgcactatgcatgttgttcagtctcaaataagtgaggttcggcaaatgcgaagcgagcatccctagtggatcttcaccaagatgacaccaacttagagctagatatttaagatttgtgccgttcccgtgaaatattgggcaatcaagtgtacccttagcccatcgccctctgatgattagtctgtggagttctgttgaccttggcctaagagcctcgaagcagagttcctcattttcgtcttttgcagaaagaagcaagctggaaagaaatggcatgcttgacaatgtagcgaaaatatttgcacaatcagcagaacttatgttgtcaatccacacacttcttagttgcatcaatttcttcagttgctcagccaggtctttgctagactccacagtttctagagtctgcagctcttgcaagttggaaagttctttaggggcatgcattccaacaaagtaccggaaatctgactgcctctcatcaacgtatctatcggctataaggtgtcttagcttcttgatcttaacaatacttcgtggtagcttctcaattttggtttgcttgatgtcaagcgtgtggaggttagataactttccaatagactccggaagtgatttgactttggtgcgtcgtaagccaatgtaatgtagattaaacatattcccaatagaagttggcacttcagtaatctctgagtcttgcagctcaagaactgtaaggtagctagatccacacaaaattgaggataacatctcaaggggcaatgaggttgtcgaaagtgagatcagggtccgaaggcgcatgaatttaactgttgatacagtatcatcactccatccacatgttgacaagcgacgaacttccttatccataagcaacattgtgccaagatcattggctgaaccaaacctctcctctttagcaatagaaagagccaatacacgcacaatgtcatgcatcttacaggagtttaccctgccaatctcatcattgtccacaacttccagcatattccggtggatcagttccataaggtttccctctgcgacatcctctagcgtgttcttttctttgcctagcacaaagccttctgcaacccacaacctcagaaggctctcccgtgtcattgtgtagtcttcagggaacaagctacagtacaagaagcaatttctgaggtctcctgataggtcatggtagctcaaatttagaattgctcggacatgatcattgtttgctagctcagtccgaagctgtttgtatattttattccaaacaaattctgctgctggtcttgaagacagaaggcttcctatcgttacaattgctagtggtaggccatgacacctatccactatagaattagcaaccttctctagctccttggggcatttgtggcccttgttatagaaagcccttctacagaagagttcaaatgcatcagcgccattcaaaggctggaggttgagacggcgcgttgaggtagcaagggctgcaacatcattctctcgagttgtgatgatgactcgagttgcttgaagattctggaatgcatcttgcatctgaaagtacacttttttgtcccagacatcatccagcacaatcaaacatttgctatcttcaatctttttcttaatttcttctttcaggtcatgtgcatccatattgttcaagctatcaagtgacagttcagtagacccaatctttctaaggagctttcttaatagagcttccacattgtaggtctgggagacaacaatccatgcatgagcagcaaagttgaccttttcacgctcataaacatttgtgactaatgtggtttttcccaacccacctataccagatactgttatcactgctctatctggctcatcagagtacaaccatccagccagcaatctcttgtggtcttcaatccccacaagatcttcatctttgacaagatatgggaagttgtcgtgagaccgtggtctgccactctcagcaagctggttgggattgagctgggaagggtgcaaccactgctctttaagctttataacttgctggatttgcttctctaacttgactacctcctcagcaatatcactaaataccacgacgtaatgagaacctttaatgaagtacttcttcaagaaaccttcttcctcaagttgaatagcatgatatgagtacttgtccattacgtcctcaacatggtaggctaactttctcacctctgcaatccaattctttacaactatatcagtgaggtatgaggtgcctatctgtagtataacactgttcatgattgtcagttgcttccttatttcttcgaccttctctggcagctccttcaaattagtaaccttttcagacaccttggcaatgacagccttggcagcttcatctgctaacacgttgccaacctttttgacagcaaggagcactgcctcagccatttgttctgaaagaacacacaccatcatgttacaaaagagaacaacaagtggcttgcgatttctagtctccaatttaacttatatatcaaagaaaatttttatttattgatgcctttaattatcactattttcctggagaaatgtgtgctttcattgaacagaactccaatggtttctgcatgaaatgtgtggcactgttcagacttggataataatggtccactgtgagaaaagaaataatggtactcatgcaccgtgtccatagagtaattcttttaccacaagcatctatgatctcataaaacgttttatgagaagttaatggcatctcataagatacaactcagcaaataaatgacaagctttatttgatttgcttgttgggcacagagtaggattccaaatcagaatggcaaacagtatcatatatgaaggccagtgctaagttatattttattaattgacttggaacaTtttttttttgacaccttactttggagttcggaaatcggctacgagattttctggacaaactatgctttcggaagagctctcctgcttggctcagtaaaagaaacattgctataatgttatacatcatgaagtacagctattctgtatgtagttgtttactttaatttgagtatgcatttattacatttcaccaacatacatgtgtttagttcctgaaattggggagaagtttggagaaagttggtagtttggaaaaaaagttgggagtttatgtgtgtaggaaagttttggatgtgacgtgatgtgatggaaagttgggagttggggggaagtttggtgtgaactaaacacaccctatacagcttcagctgaagcaacttgtgggctgaacatagttcatacatattcaaagaaaataactggttcatcaacaagacagtgagcagaaagactatacattagacaagcaagtttagcagcattacctggaacattagactaacaactatgaagaacaaaaaaatgatccatagaacagaacacacaacaaatacactgccatactgagtagtgatttatatgcttgctcacctgctggaagaccagagaacagggctggagcgcaggtgctgtacggtcagtgtgcagaaccctgcaggatcaaacaagagagaatgagaacgcagtcagcaaagcagttcgtgatcgtgcacaaccggggacaagatttggccaaaaaaaaaaaagcgccgcgcgcaggccgcggaaccacaccagacgaaggcgtggcggcctcccttcgccggatgcgtcggcgcgcagcgtgcctagactcgcggtcgggaacgcgcattccgacgaacacttggcgggcgccgcaaagggggggacactgggtgttcatcccaaagggggagatgatcaatccttgcaaagtcaactcgcgtaccaatccgtcaacggaatgcggatcgaaatcgagagaaggaggagttcttcgcgatcttcgggtgatactaaagtcgccgagcacgagcaaatcgagagagacaacaaaaaatgctcagcggcgaaacggctctgcagcatgaactactactaatcgctcccaagctccatggattctgcaagtgaagggatgcacgcacctgatgatgaatcgatcgcacgggagctcgccgacgagagaggaggagaccttgacccgctcggagctcttgagtcttgagccagctgcctgcagcttggttcttcttcttttcttttcttttctttttttttcccttatttctgtctgggtcaagtcgtcgctgtctttttcgtctcctaaaataatttctgggaattagcgtgggtttagttcgtgaaaattgttcgatgtcacataggacactgtatatcagaaaagattttcggacacgaatgaaaaaactaatttcataactcgcctggaaaccgcaagatgaatttattaagtctaattaatccgtcattagcatatatgggttattgtagcacttatggctaatcatggactaattagactcaaaagattcgtctcgcgatttccatgcaaactgtgcaattaggttttttctatatttaatactctatatatgtgtctaaagattcgatgtgatatttttggacaaaattttttaagaactaaggcattgtttagttggagaaaatttttaagtttggttgtcacatcggatatacggacacacatttgaagtattaaacgtagtgtaataacaaaataatacgagatgaatttattaagtctaattaatttgtcattagcaaatatataccgtagctccacgttgtcaaaacatgaagcgatatcttctctcaaatttaggtgggcccaccactaatttttttcctaggctgccctaccacgaaaatcgctcccctcagtcatctctgtgggtccgcatttgacttatttcctaataaatcaaaacagcttattagaaaataaaaataaatttatagatgaaacttttataaatgtgttcttggtaacttaaaagccaatgttgtaaaagaaactacgttaaaaatatctcaatctcaaaattaagtttaaaaattcaaaatttggttttttttttttttttggtgattagccatccgatgggagccttccctgagcaaatctcccgcaccaacctcctcaacctccgccactccttccccttctctctctctctcctatcctatccatctttccgttctctcccaggggggcgagccgaccccccacccccctcctctcctcccaccggtagcacaaatctggcagtggccctcctttcctaagccggcaccgcttgggagaagatatggcgacgacgagtgccgtatcttcttccgcttgggagggcaagtgcgggggctcgagcggcggcaaaaagagaggagagaaagagaagagatgggggtggcgtggtgaggatggggctcggctctcctcttattggcggcgtgagcttggcgggacgcggcgagctggcggctaggcaccgcgaatccgggcatagccggctagctgctacggcgagcggatgacgatgcggtggcgcggcgacgtgatgacgatggtgacggcgcgacgtcatgggaggcggcgatggaacgcgaggtgacgcgcggggagcgggtttggcgacgggacaatggtgacgcgcgacggacggcggctacggccgggaatcgagcggtagggttcttctcagagcgaggggacgcgagcggcgtcatgcggtggtggcaacgcgacgcgagagagagagataggcgcgggctcggcggcttcccgggaggagacgggcgacaaggcgcggtgtgacaagtggagagggcgcgcgtccgcgggagcccgggataggacggcgtggcgtcacgaggaggtggcgacgggacgacgcggcgccgtgtctcccggagagaaaccggagcgagggatgggatgtgattcccactgggatatgcggcttggcagggcgcggctttggcgcgatgcggtcctggcacggcgcgcggcgcatgggagggcggctcggtgcgtcagcactgcaacgactcagtgctcgggcgagacatttcgtcgaacatgtggtgcgcgcgcgcgaccggtcggaggaggaagacaaacagcggtgggctgggccggtgcgggaaggccatgggccggcctgctcggggagagagaggagaggaaagggagttgggctgagggaagaaaaaggaaaaaaagaggcccaaatgaatagtgacctttgacctttcacattttctctaggatttggaatttgaaattttggggagtttttggaggaatctaatttgaattttgtcctagggttttgacaacaactcgaggggatttctaagagaggatttgagacctatttggcacaaaatcaaataagaaccaaatttatactcaaaatgtttaaatgacaagatttttaaataaatgaaaaattcaagggtgctacaaaattacaaagagcctctttaaggtaaagaaagcatgcaacttctagacacatatttctgcaacatgcagcatcttcttgtgcatctcattaccattccattggattttgaagtctttatgcaggttcgacagggagagcttcttcagggagttaagggactcaatgccttgagggaccttgtccagcttcggcagcaacacaatgtacaagccttcaatgcatggaagggcgccatccatgatctttatctgcttgacatcaggcatctgcctcaagacaagagtctttagtttggggaatgcctttgcacgaagaactaatgttgctgcactctgcatgttgttcagttttagataagtgaggtccgacaagttcgacgcaagcatccccagtggatcttccccgagatgacaccaacttagggataaatatttgagatgtgtactgtggctacggaatatcgggtagtccaatgtactcttggcccattgccctctgacaattaacctgtggagttctgtggaacttggcttgagagcctcaaaagagagtggctcattctcattccttgcagaaagaagcaaactggaaagtagcggcatatttgacagtgtagcaaaaatattatcacaatcagcagagcttatgttgtcaatccatacactttttagttgtatgagtttcttcaactgctcagctaagtccttgctggcttcaacagtctccagagtttgtagttctttcaggttggatagatctttaggtgcctgcattcctacaaagtatcggaactccgactgcttctcgtcaacacatctatcagcaaacaagtgtcttagcttcttgattttagtgattcctcgtggtagcttctctatctttgtttgcttcatgtccagagtgtggaggttcagcaacttttcaatggagtctgggagtgacttaaccttggtcctccgtaagccaatgtaacgtagattaaacaaattccctatagatggtggaacttgagtgatttctgaatcttgaagctcaagaacagtaaggtagcttgattcaaaaattgaggacaacatgtctcgggaagatgaaattgcctcaagtgatactagggttcgaagacgtggaagttttggtgcagtaccagcactatgtttccattcataagatgatagacgacgaacatctttatcaatatgtatcattgtgcccaaatcatttgcagagccaaacttctcctctttagcaacagaaagggccaggtctcgcacaatatcatgcattgtacaggtagacaccctacctagctcatcattctccttaacttgaagcatattccgatatatcagttccatgagattttcctcggctaccacctctggtgtgttgctctctttgctttggacaaagccttctgcaatccacagtcgcacaaggctctcacgggaaatcgggtagtcttctgggaataagctgcagtacagaaaacagtttctgagttctcctgataggtcatggtagctcatatttaaaattgctcgaacatgattgttctttgatagctcacttctaagctgtttgtatgtttgattccaaacatagtgtgtccgtggtcttgaagacaagaggctgcctattgagacaatggctagtggtaggccctgacagcgttctactatagatgtggcaactttcacaagctcattgggacactcatggtccttgttgctataaaatgcccgtctgcagaatagataaaaggcttgagtatcacccagtggctgcagatcaaggcgacatgttgaggaagcaagagctgcaacatgattcttccgtgtagtgataatcacacgacttgcttggttgccctcgattgcatcacgtatcttgaagtatgcttcttggtcccagacatcatccagtacaatcaagcatttcctatctttgagtgttcgctttatttcctctttcaaatcatatgcatccttttcatcaacgttaccagtgtaaccaacttttctaagcagctttctcaacaagacttccacagtgtaggtttgagacacgaccatccacgcatgagcagagaagttgatcttttcacgttcataaatatttgtgaccagtgtggttttccccagtccacccatacctgacaccgttatcaccttgttgcccatgtcattagagtacagccattcagtcagcagtctcctgttgtcttcaatccccacaagatcttcatctttcacaagttctgggaagctgtcttgggacctctgtctttccatctcagtgagcgggtcagaaacaagctgggatggatgcaaccactgatccttcagttctataacttgtttgatttccttctctatcttgactacctcattagcaatttcagtgaaaacaataacataatgtgatgctttgatgaagtattttttaaggaaccattcttccgccatttgcacagagtagtacgagtatttgtccatgacatcctcaacacggtaggccaccttcctcacctccccaatccaacccttgacgacttcatcagtgaggtatgccgtgcctatctgcaataaaacgttgttcattgttgtcacttgcttcctcatttgctcaatcttctcatccagatccttcagattattaaccttttcagacagtttggcaatcaattctttagcgatttcatttgctaaagcatcaccgatcttcgttagagcaaggaggaccgcctctgccat
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| CDS seq | atggcagaggcggtcctccttgctctaacgaagatcggtgatgctttagcaaatgaaatcgctaaagaattgattgccaaactgtctgaaaaggttaataatctgaaggatctggatgagaagattgagcaaatgaggaagcaagtgacaacaatgaacaacgttttattgcagataggcacggcatacctcactgatgaagtcgtcaagggttggattggggaggtgaggaaggtggcctaccgtgttgaggatgtcatggacaaatactcgtactactctgtgcaaatggcggaagaatggttccttaaaaaatacttcatcaaagcatcacattatgttattgttttcactgaaattgctaatgaggtagtcaagatagagaaggaaatcaaacaagttatagaactgaaggatcagtggttgcatccatcccagcttgtttctgacccgctcactgagatggaaagacagaggtcccaagacagcttcccagaacttgtgaaagatgaagatcttgtggggattgaagacaacaggagactgctgactgaatggctgtactctaatgacatgggcaacaaggtgataacggtgtcaggtatgggtggactggggaaaaccacactggtcacaaatatttatgaacgtgaaaagatcaacttctctgctcatgcgtggatggtcgtgtctcaaacctacactgtggaagtcttgttgagaaagctgcttagaaaagttggttacactggtaacgttgatgaaaaggatgcatatgatttgaaagaggaaataaagcgaacactcaaagataggaaatgcttgattgtactggatgatgtctgggaccaagaagcatacttcaagatacgtgatgcaatcgagggcaaccaagcaagtcgtgtgattatcactacacggaagaatcatgttgcagctcttgcttcctcaacatgtcgccttgatctgcagccactgggtgatactcaagccttttatctattctgcagacgggcattttatagcaacaaggaccatgagtgtcccaatgagcttgtgaaagttgccacatctatagtagaacgctgtcagggcctaccactagccattgtctcaataggcagcctcttcttattcccagaagactacccgatttcccgtgagagccttgtgcgactgtggattgcagaaggctttgtccaaagcaaagagagcaacacaccagaggtggtagccgaggaaaatctcatggaactgatatatcggaatatgcttcaagttaaggagaatgatgagctaggtagggtgtctacctgtacaatgcatgatattgtgcgagacctggccctttctgttgctaaagaggagaagtttggctctgcaaatgatttgggcacaatgatacatattgataaagatgttcgtcgtctatcatcttatgaatggaaacatagtgctggtactgcaccaaaacttccacgtcttcgaaccctagtatcacttgaggcaatttcatcttcccgagacatgttgtcctcaatttttgaatcaagctaccttactgttcttgagcttcaagattcagaaatcactcaagttccaccatctatagggaatttgtttaatctacgttacattggcttacggaggaccaaggttaagtcactcccagactccattgaaaagttgctgaacctccacactctggacatgaagcaaacaaagatagagaagctaccacgaggaatcactaaaatcaagaagctaagacacttgtttgctgatagatgtgttgacgagaagcagtcggagttccgatactttgtaggaatgcaggcacctaaagatctatccaacctgaaagaactacaaactctggagactgttgaagccagcaaggacttagctgagcagttgaagaaactcatacaactaaaaagtgtatggattgacaacataagctctgctgattgtgataatatttttgctacactgtcaaatatgccgctactttccagtttgcttctttctgcaaggaatgagaatgagccactctcttttgaggctctcaagccaagttccacagaactccacaggttaattgtcagagggcaatgggccaagagtacattggactacccgatattccgtagccacagtacacatctcaaatatttatccctaagttggtgtcatctcggggaagatccactggggatgcttgcgtcgaacttgtcggacctcacttatctaaaactgaacaacatgcagagtgcagcaacattagttcttcgtgcaaaggcattccccaaactaaagactcttgtcttgaggcagatgcctgatgtcaagcagataaagatcatggatggcgcccttccatgcattgaaggcttgtacattgtgttgctgccgaagctggacaaggtccctcaaggcattgagtcccttaactccctgaagaagctctccctgtcgaacctgcataaagacttcaaaatccaatggaatggtaatgagatgcacaagaagatgctgcatgcagctggctcaagactcaagagctccgagcgggtcaaggtctcctcctctctcgtcggcgagctcccgtgcgatcgattcatcatcagggttctgcacactgaccgtacagcacctgcgctccagccctgttctctggtcttccagcaggcagtgctccttgctgtcaaaaaggttggcaacgtgttagcagatgaagctgccaaggctgtcattgccaaggtgtctgaaaaggttactaatttgaaggagctgccagagaaggtcgaagaaataaggaagcaactgacaatcatgaacagtgttatactacagataggcacctcatacctcactgatatagttgtaaagaattggattgcagaggtgagaaagttagcctaccatgttgaggacgtaatggacaagtactcatatcatgctattcaacttgaggaagaaggtttcttgaagaagtacttcattaaaggttctcattacgtcgtggtatttagtgatattgctgaggaggtagtcaagttagagaagcaaatccagcaagttataaagcttaaagagcagtggttgcacccttcccagctcaatcccaaccagcttgctgagagtggcagaccacggtctcacgacaacttcccatatcttgtcaaagatgaagatcttgtggggattgaagaccacaagagattgctggctggatggttgtactctgatgagccagatagagcagtgataacagtatctggtataggtgggttgggaaaaaccacattagtcacaaatgtttatgagcgtgaaaaggtcaactttgctgctcatgcatggattgttgtctcccagacctacaatgtggaagctctattaagaaagctccttagaaagattgggtctactgaactgtcacttgatagcttgaacaatatggatgcacatgacctgaaagaagaaattaagaaaaagattgaagatagcaaatgtttgattgtgctggatgatgtctgggacaaaaaagtgtactttcagatgcaagatgcattccagaatcttcaagcaactcgagtcatcatcacaactcgagagaatgatgttgcagcccttgctacctcaacgcgccgtctcaacctccagcctttgaatggcgctgatgcatttgaactcttctgtagaagggctttctataacaagggccacaaatgccccaaggagctagagaaggttgctaattctatagtggataggtgtcatggcctaccactagcaattgtaacgataggaagccttctgtcttcaagaccagcagcagaatttgtttggaataaaatatacaaacagcttcggactgagctagcaaacaatgatcatgtccgagcaattctaaatttgagctaccatgacctatcaggagacctcagaaattgcttcttgtactgtagcttgttccctgaagactacacaatgacacgggagagccttctgaggttgtgggttgcagaaggctttgtgctaggcaaagaaaagaacacgctagaggatgtcgcagagggaaaccttatggaactgatccaccggaatatgctggaagttgtggacaatgatgagattggcagggtaaactcctgtaagatgcatgacattgtgcgtgtattggctctttctattgctaaagaggagaggtttggttcagccaatgatcttggcacaatgttgcttatggataaggaagttcgtcgcttgtcaacatgtggatggagtgatgatactgtatcaacagttaaattcatgcgccttcggaccctgatctcactttcgacaacctcattgccccttgagatgttatcctcaattttgtgtggatctagctaccttacagttcttgagctgcaagactcagagattactgaagtgccaacttctattgggaatatgtttaatctacattacattggcttacgacgcaccaaagtcaaatcacttccggagtctattggaaagttatctaacctccacacgcttgacatcaagcaaaccaaaattgagaagctaccacgaagtattgttaagatcaagaagctaagacaccttatagccgatagatacgttgatgagaggcagtcagatttccggtactttgttggaatgcatgcccctaaagaactttccaacttgcaagagctgcagactctagaaactgtggagtctagcaaagacctggctgagcaactgaagaaattgatgcaactaagaagtgtgtggattgacaacataagttctgctgattgtgcaaatattttcgctacattgtcaagcatgccatttctttccagcttgcttctttctgcaaaagacgaaaatgaggaactctgcttcgaggctcttaggccaaggtcaacagaactccacagactaatcatcagagggcgatgggctaagggtacacttgattgcccaatatttcacgggaacggcacaaatcttaaatatctagctctaagttggtgtcatcttggtgaagatccactagggatgctcgcttcgcatttgccgaacctcacttatttgagactgaacaacatgcatagtgcaaacattttggttctttctacacagtcttttccccacctgaagacacttgtcttaaagcacatgcccaatgtgaaccagctaaagatcatggatggggcacttccatccattgaaggtttgtacgttgtgtcactctcaaagctggatatagtccctgagggcattgagtcccttcggaccctgaagaagctctggcttctgtacctgcacagggacttcaaaactcaatggcacaaaaacagaatgcatcagaagatgcagcatgttccagagattcgtgtttag
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| Protein seq | MAEAVLLALTKIGDALANEIAKELIAKLSEKVNNLKDLDEKIEQMRKQVTTMNNVLLQIGTAYLTDEVVKGWIGEVRKVAYRVEDVMDKYSYYSVQMAEEWFLKKYFIKASHYVIVFTEIANEVVKIEKEIKQVIELKDQWLHPSQLVSDPLTEMERQRSQDSFPELVKDEDLVGIEDNRRLLTEWLYSNDMGNKVITVSGMGGLGKTTLVTNIYEREKINFSAHAWMVVSQTYTVEVLLRKLLRKVGYTGNVDEKDAYDLKEEIKRTLKDRKCLIVLDDVWDQEAYFKIRDAIEGNQASRVIITTRKNHVAALASSTCRLDLQPLGDTQAFYLFCRRAFYSNKDHECPNELVKVATSIVERCQGLPLAIVSIGSLFLFPEDYPISRESLVRLWIAEGFVQSKESNTPEVVAEENLMELIYRNMLQVKENDELGRVSTCTMHDIVRDLALSVAKEEKFGSANDLGTMIHIDKDVRRLSSYEWKHSAGTAPKLPRLRTLVSLEAISSSRDMLSSIFESSYLTVLELQDSEITQVPPSIGNLFNLRYIGLRRTKVKSLPDSIEKLLNLHTLDMKQTKIEKLPRGITKIKKLRHLFADRCVDEKQSEFRYFVGMQAPKDLSNLKELQTLETVEASKDLAEQLKKLIQLKSVWIDNISSADCDNIFATLSNMPLLSSLLLSARNENEPLSFEALKPSSTELHRLIVRGQWAKSTLDYPIFRSHSTHLKYLSLSWCHLGEDPLGMLASNLSDLTYLKLNNMQSAATLVLRAKAFPKLKTLVLRQMPDVKQIKIMDGALPCIEGLYIVLLPKLDKVPQGIESLNSLKKLSLSNLHKDFKIQWNGNEMHKKMLHAAGSRLKSSERVKVSSSLVGELPCDRFIIRVLHTDRTAPALQPCSLVFQQAVLLAVKKVGNVLADEAAKAVIAKVSEKVTNLKELPEKVEEIRKQLTIMNSVILQIGTSYLTDIVVKNWIAEVRKLAYHVEDVMDKYSYHAIQLEEEGFLKKYFIKGSHYVVVFSDIAEEVVKLEKQIQQVIKLKEQWLHPSQLNPNQLAESGRPRSHDNFPYLVKDEDLVGIEDHKRLLAGWLYSDEPDRAVITVSGIGGLGKTTLVTNVYEREKVNFAAHAWIVVSQTYNVEALLRKLLRKIGSTELSLDSLNNMDAHDLKEEIKKKIEDSKCLIVLDDVWDKKVYFQMQDAFQNLQATRVIITTRENDVAALATSTRRLNLQPLNGADAFELFCRRAFYNKGHKCPKELEKVANSIVDRCHGLPLAIVTIGSLLSSRPAAEFVWNKIYKQLRTELANNDHVRAILNLSYHDLSGDLRNCFLYCSLFPEDYTMTRESLLRLWVAEGFVLGKEKNTLEDVAEGNLMELIHRNMLEVVDNDEIGRVNSCKMHDIVRVLALSIAKEERFGSANDLGTMLLMDKEVRRLSTCGWSDDTVSTVKFMRLRTLISLSTTSLPLEMLSSILCGSSYLTVLELQDSEITEVPTSIGNMFNLHYIGLRRTKVKSLPESIGKLSNLHTLDIKQTKIEKLPRSIVKIKKLRHLIADRYVDERQSDFRYFVGMHAPKELSNLQELQTLETVESSKDLAEQLKKLMQLRSVWIDNISSADCANIFATLSSMPFLSSLLLSAKDENEELCFEALRPRSTELHRLIIRGRWAKGTLDCPIFHGNGTNLKYLALSWCHLGEDPLGMLASHLPNLTYLRLNNMHSANILVLSTQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESLRTLKKLWLLYLHRDFKTQWHKNRMHQKMQHVPEIRV |
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| Function | Disease resistance protein RPM1 [UniProtKB/Swiss-Prot:Q39214] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_11g0007980 | OsLaMu_11g0007980.01 | Chr11 | 6877254 | 6886954 | - | NAM | ||
| CDS seq | atggcagaggcggtcctccttgctctaacgaagatcggtgatgctttagcaaatgaaatcgctaaagaattgattgccaaactgtctgaaaaggttaataatctgaaggatctggatgagaagattgagcaaatgaggaagcaagtgacaacaatgaacaacgttttattgcagataggcacggcatacctcactgatgaagtcgtcaagggttggattggggaggtgaggaaggtggcctaccgtgttgaggatgtcatggacaaatactcgtactactctgtgcaaatggcggaagaatggttccttaaaaaatacttcatcaaagcatcacattatgttattgttttcactgaaattgctaatgaggtagtcaagatagagaaggaaatcaaacaagttatagaactgaaggatcagtggttgcatccatcccagcttgtttctgacccgctcactgagatggaaagacagaggtcccaagacagcttcccagaacttgtgaaagatgaagatcttgtggggattgaagacaacaggagactgctgactgaatggctgtactctaatgacatgggcaacaaggtgataacggtgtcaggtatgggtggactggggaaaaccacactggtcacaaatatttatgaacgtgaaaagatcaacttctctgctcatgcgtggatggtcgtgtctcaaacctacactgtggaagtcttgttgagaaagctgcttagaaaagttggttacactggtaacgttgatgaaaaggatgcatatgatttgaaagaggaaataaagcgaacactcaaagataggaaatgcttgattgtactggatgatgtctgggaccaagaagcatacttcaagatacgtgatgcaatcgagggcaaccaagcaagtcgtgtgattatcactacacggaagaatcatgttgcagctcttgcttcctcaacatgtcgccttgatctgcagccactgggtgatactcaagccttttatctattctgcagacgggcattttatagcaacaaggaccatgagtgtcccaatgagcttgtgaaagttgccacatctatagtagaacgctgtcagggcctaccactagccattgtctcaataggcagcctcttcttattcccagaagactacccgatttcccgtgagagccttgtgcgactgtggattgcagaaggctttgtccaaagcaaagagagcaacacaccagaggtggtagccgaggaaaatctcatggaactgatatatcggaatatgcttcaagttaaggagaatgatgagctaggtagggtgtctacctgtacaatgcatgatattgtgcgagacctggccctttctgttgctaaagaggagaagtttggctctgcaaatgatttgggcacaatgatacatattgataaagatgttcgtcgtctatcatcttatgaatggaaacatagtgctggtactgcaccaaaacttccacgtcttcgaaccctagtatcacttgaggcaatttcatcttcccgagacatgttgtcctcaatttttgaatcaagctaccttactgttcttgagcttcaagattcagaaatcactcaagttccaccatctatagggaatttgtttaatctacgttacattggcttacggaggaccaaggttaagtcactcccagactccattgaaaagttgctgaacctccacactctggacatgaagcaaacaaagatagagaagctaccacgaggaatcactaaaatcaagaagctaagacacttgtttgctgatagatgtgttgacgagaagcagtcggagttccgatactttgtaggaatgcaggcacctaaagatctatccaacctgaaagaactacaaactctggagactgttgaagccagcaaggacttagctgagcagttgaagaaactcatacaactaaaaagtgtatggattgacaacataagctctgctgattgtgataatatttttgctacactgtcaaatatgccgctactttccagtttgcttctttctgcaaggaatgagaatgagccactctcttttgaggctctcaagccaagttccacagaactccacaggttaattgtcagagggcaatgggccaagagtacattggactacccgatattccgtagccacagtacacatctcaaatatttatccctaagttggtgtcatctcggggaagatccactggggatgcttgcgtcgaacttgtcggacctcacttatctaaaactgaacaacatgcagagtgcagcaacattagttcttcgtgcaaaggcattccccaaactaaagactcttgtcttgaggcagatgcctgatgtcaagcagataaagatcatggatggcgcccttccatgcattgaaggcttgtacattgtgttgctgccgaagctggacaaggtccctcaaggcattgagtcccttaactccctgaagaagctctccctgtcgaacctgcataaagacttcaaaatccaatggaatggtaatgagatgcacaagaagatgctgcatgcagctggctcaagactcaagagctccgagcgggtcaaggtctcctcctctctcgtcggcgagctcccgtgcgatcgattcatcatcagggttctgcacactgaccgtacagcacctgcgctccagccctgttctctggtcttccagcaggcagtgctccttgctgtcaaaaaggttggcaacgtgttagcagatgaagctgccaaggctgtcattgccaaggtgtctgaaaaggttactaatttgaaggagctgccagagaaggtcgaagaaataaggaagcaactgacaatcatgaacagtgttatactacagataggcacctcatacctcactgatatagttgtaaagaattggattgcagaggtgagaaagttagcctaccatgttgaggacgtaatggacaagtactcatatcatgctattcaacttgaggaagaaggtttcttgaagaagtacttcattaaaggttctcattacgtcgtggtatttagtgatattgctgaggaggtagtcaagttagagaagcaaatccagcaagttataaagcttaaagagcagtggttgcacccttcccagctcaatcccaaccagcttgctgagagtggcagaccacggtctcacgacaacttcccatatcttgtcaaagatgaagatcttgtggggattgaagaccacaagagattgctggctggatggttgtactctgatgagccagatagagcagtgataacagtatctggtataggtgggttgggaaaaaccacattagtcacaaatgtttatgagcgtgaaaaggtcaactttgctgctcatgcatggattgttgtctcccagacctacaatgtggaagctctattaagaaagctccttagaaagattgggtctactgaactgtcacttgatagcttgaacaatatggatgcacatgacctgaaagaagaaattaagaaaaagattgaagatagcaaatgtttgattgtgctggatgatgtctgggacaaaaaagtgtactttcagatgcaagatgcattccagaatcttcaagcaactcgagtcatcatcacaactcgagagaatgatgttgcagcccttgctacctcaacgcgccgtctcaacctccagcctttgaatggcgctgatgcatttgaactcttctgtagaagggctttctataacaagggccacaaatgccccaaggagctagagaaggttgctaattctatagtggataggtgtcatggcctaccactagcaattgtaacgataggaagccttctgtcttcaagaccagcagcagaatttgtttggaataaaatatacaaacagcttcggactgagctagcaaacaatgatcatgtccgagcaattctaaatttgagctaccatgacctatcaggagacctcagaaattgcttcttgtactgtagcttgttccctgaagactacacaatgacacgggagagccttctgaggttgtgggttgcagaaggctttgtgctaggcaaagaaaagaacacgctagaggatgtcgcagagggaaaccttatggaactgatccaccggaatatgctggaagttgtggacaatgatgagattggcagggtaaactcctgtaagatgcatgacattgtgcgtgtattggctctttctattgctaaagaggagaggtttggttcagccaatgatcttggcacaatgttgcttatggataaggaagttcgtcgcttgtcaacatgtggatggagtgatgatactgtatcaacagttaaattcatgcgccttcggaccctgatctcactttcgacaacctcattgccccttgagatgttatcctcaattttgtgtggatctagctaccttacagttcttgagctgcaagactcagagattactgaagtgccaacttctattgggaatatgtttaatctacattacattggcttacgacgcaccaaagtcaaatcacttccggagtctattggaaagttatctaacctccacacgcttgacatcaagcaaaccaaaattgagaagctaccacgaagtattgttaagatcaagaagctaagacaccttatagccgatagatacgttgatgagaggcagtcagatttccggtactttgttggaatgcatgcccctaaagaactttccaacttgcaagagctgcagactctagaaactgtggagtctagcaaagacctggctgagcaactgaagaaattgatgcaactaagaagtgtgtggattgacaacataagttctgctgattgtgcaaatattttcgctacattgtcaagcatgccatttctttccagcttgcttctttctgcaaaagacgaaaatgaggaactctgcttcgaggctcttaggccaaggtcaacagaactccacagactaatcatcagagggcgatgggctaagggtacacttgattgcccaatatttcacgggaacggcacaaatcttaaatatctagctctaagttggtgtcatcttggtgaagatccactagggatgctcgcttcgcatttgccgaacctcacttatttgagactgaacaacatgcatagtgcaaacattttggttctttctacacagtcttttccccacctgaagacacttgtcttaaagcacatgcccaatgtgaaccagctaaagatcatggatggggcacttccatccattgaaggtttgtacgttgtgtcactctcaaagctggatatagtccctgagggcattgagtcccttcggaccctgaagaagctctggcttctgtacctgcacagggacttcaaaactcaatggcacaaaaacagaatgcatcagaagatgcagcatgttccagagattcgtgtttag
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| Protein seq | MAEAVLLALTKIGDALANEIAKELIAKLSEKVNNLKDLDEKIEQMRKQVTTMNNVLLQIGTAYLTDEVVKGWIGEVRKVAYRVEDVMDKYSYYSVQMAEEWFLKKYFIKASHYVIVFTEIANEVVKIEKEIKQVIELKDQWLHPSQLVSDPLTEMERQRSQDSFPELVKDEDLVGIEDNRRLLTEWLYSNDMGNKVITVSGMGGLGKTTLVTNIYEREKINFSAHAWMVVSQTYTVEVLLRKLLRKVGYTGNVDEKDAYDLKEEIKRTLKDRKCLIVLDDVWDQEAYFKIRDAIEGNQASRVIITTRKNHVAALASSTCRLDLQPLGDTQAFYLFCRRAFYSNKDHECPNELVKVATSIVERCQGLPLAIVSIGSLFLFPEDYPISRESLVRLWIAEGFVQSKESNTPEVVAEENLMELIYRNMLQVKENDELGRVSTCTMHDIVRDLALSVAKEEKFGSANDLGTMIHIDKDVRRLSSYEWKHSAGTAPKLPRLRTLVSLEAISSSRDMLSSIFESSYLTVLELQDSEITQVPPSIGNLFNLRYIGLRRTKVKSLPDSIEKLLNLHTLDMKQTKIEKLPRGITKIKKLRHLFADRCVDEKQSEFRYFVGMQAPKDLSNLKELQTLETVEASKDLAEQLKKLIQLKSVWIDNISSADCDNIFATLSNMPLLSSLLLSARNENEPLSFEALKPSSTELHRLIVRGQWAKSTLDYPIFRSHSTHLKYLSLSWCHLGEDPLGMLASNLSDLTYLKLNNMQSAATLVLRAKAFPKLKTLVLRQMPDVKQIKIMDGALPCIEGLYIVLLPKLDKVPQGIESLNSLKKLSLSNLHKDFKIQWNGNEMHKKMLHAAGSRLKSSERVKVSSSLVGELPCDRFIIRVLHTDRTAPALQPCSLVFQQAVLLAVKKVGNVLADEAAKAVIAKVSEKVTNLKELPEKVEEIRKQLTIMNSVILQIGTSYLTDIVVKNWIAEVRKLAYHVEDVMDKYSYHAIQLEEEGFLKKYFIKGSHYVVVFSDIAEEVVKLEKQIQQVIKLKEQWLHPSQLNPNQLAESGRPRSHDNFPYLVKDEDLVGIEDHKRLLAGWLYSDEPDRAVITVSGIGGLGKTTLVTNVYEREKVNFAAHAWIVVSQTYNVEALLRKLLRKIGSTELSLDSLNNMDAHDLKEEIKKKIEDSKCLIVLDDVWDKKVYFQMQDAFQNLQATRVIITTRENDVAALATSTRRLNLQPLNGADAFELFCRRAFYNKGHKCPKELEKVANSIVDRCHGLPLAIVTIGSLLSSRPAAEFVWNKIYKQLRTELANNDHVRAILNLSYHDLSGDLRNCFLYCSLFPEDYTMTRESLLRLWVAEGFVLGKEKNTLEDVAEGNLMELIHRNMLEVVDNDEIGRVNSCKMHDIVRVLALSIAKEERFGSANDLGTMLLMDKEVRRLSTCGWSDDTVSTVKFMRLRTLISLSTTSLPLEMLSSILCGSSYLTVLELQDSEITEVPTSIGNMFNLHYIGLRRTKVKSLPESIGKLSNLHTLDIKQTKIEKLPRSIVKIKKLRHLIADRYVDERQSDFRYFVGMHAPKELSNLQELQTLETVESSKDLAEQLKKLMQLRSVWIDNISSADCANIFATLSSMPFLSSLLLSAKDENEELCFEALRPRSTELHRLIIRGRWAKGTLDCPIFHGNGTNLKYLALSWCHLGEDPLGMLASHLPNLTYLRLNNMHSANILVLSTQSFPHLKTLVLKHMPNVNQLKIMDGALPSIEGLYVVSLSKLDIVPEGIESLRTLKKLWLLYLHRDFKTQWHKNRMHQKMQHVPEIRV
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.180296 | 1.474919 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0226933 | RBH | 3.265536 | 4.079123 | 3.423502 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g11960 | RBH | 2.288282 | 2.649541 | 0.808534 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0228600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0008030 | RBH | 0.193260 | 19.767826 | 1.430310 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0008070 | RBH | 0.0 | 1.969321 | 0.183177 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0007910 | RBH | 2.060827 | 18.695328 | 1.356757 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0007770 | RBH | 0.137865 | 0.304908 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0007790 | RBH | 3.349424 | 9.534272 | 15.472604 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0105900 | RBH | 0.109065 | 0.603869 | 0.012481 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0007780 | RBH | 0.111396 | 0.421400 | 1.370011 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0112200 | SBH | 15.4623085 | 6.930455 | 2.7797995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0007950 | RBH | 0.0 | 0.257585 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0008000 | RBH | 0.160174 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0008000 | RBH | 0.0 | 0.000000 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0007880 | RBH | 0.437642 | 0.0 | 0.310380 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0007910 | RBH | 0.192919 | 3.346177 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G008030 | SBH | 0.0 | 0.0 | 0.398591 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0007870 | RBH | 0.0 | 4.353945 | 0.505862 |
