Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_10g0000890 | OGI:10005090 | 7/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr10:1664228-1665444 | ||||||||
| Gene Symbol | LRR-RLK2, OsLRR-RLK2 | ||||||||||
| DNA seq | atggagcacccaagtagtttctatgttgaatgtgaggcattgaaaagcattcgccatcggaaccttgtgagagtgattggcctatgttcaacctttgatacatcagggtttgaattcaaagcacTttttttttgcggtgatgaattcaaagcacttgttcttgagtttagatcaaatggcaaccttgaagtctggatcaatccaaaagtgcgcagtcaaagccccccaaaactgttaagagtagctgaagacattgccactgcattggactatcttcataaccgattcctcccttggttcactgcgatctgaaaccaagcaatatccttttgaatgatgaatcctttagtgactttggacttgcaaagtttcttcagaacaacattataagcctgggtgatgcatcaagcactaccagactgagagggtcaatcggatacattgcaccaggtgatcacctgcttcattcttattttgtccatttctattgtctccattttatctttcacggaagtgatgcaaaactgtatcatattttgactgactaagaaagattatcaacttgcataattaatattgatcgcagagtatggcttggggtgcaaaatttcaatagaggatgatgtatatagttatggaattattgttccagagataatcataggaaagcgccctaacttcacagctttgtggagtcagcatatttccacatcaaatcaatgaaattttagagcccctactctcacctatcatcatgaaggtgaagacccaaatcatgctgtggttgaaatgcaaacatccatagaattggctaagcttgggctaaagtgcacagagccatcaccaaaggatcgttcaacaatgtgcgatgtttacgctgagatcatttttacatcaaagagaaatattatgcactcatcaactggggaaatggatggatactgctgaagttcacctgctgaagctagtaaaataaattgtgatgtgctgtgctcatctttctcttggattcgaaataaattgtgatgaatttgtaattacattggtctgaaccaaactgcaagcggccgggaagcacgcctatccagagaatcagttttgataactaattaagatttaaattaactaacttttgtttgcaggaagatgacacaatcgttgacaacgaattgaagatgaaccagattgccaccatgagaatccctgcactgcagtag
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| CDS seq | atggagcacccaagtagtttctatgttgaatgtgaggcattgaaaagcattcgccatcggaaccttgtgagagtgattggcctatgttcaacctttgatacatcagggtttgaattcaaagcacTttttttttgcggtgatgaattcaaagcacttgttcttgagtttagatcaaatggcaaccttgaagtctggatcaatccaaaagtgcgcagtcaaagccccccaaaactgttaagagtagctgaagacattgccactgcattggactatcttcataaccgattcctcccttgtgactttggacttgcaaagtttcttcagaacaacattataagcctgggtgatgcatcaagcactaccagactgagagggtcaatcggatacattgcaccagagtatggcttggggtgcaaaatttcaatagaggatgatgtatatagttatggaattattgttccagagataatcataggaaagcgccctaacttcacagctttagcccctactctcacctatcatcatgaaggtgaagacccaaatcatgctgtggttgaaatgcaaacatccatagaattggctaagcttgggctaaagtgcacagagccatcaccaaaggatcgttcaacaatgtgcgatgaagatgacacaatcgttgacaacgaattgaagatgaaccagattgccaccatgagaatccctgcactgcagtag
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| Protein seq | MEHPSSFYVECEALKSIRHRNLVRVIGLCSTFDTSGFEFKALFFCGDEFKALVLEFRSNGNLEVWINPKVRSQSPPKLLRVAEDIATALDYLHNRFLPCDFGLAKFLQNNIISLGDASSTTRLRGSIGYIAPEYGLGCKISIEDDVYSYGIIVPEIIIGKRPNFTALAPTLTYHHEGEDPNHAVVEMQTSIELAKLGLKCTEPSPKDRSTMCDEDDTIVDNELKMNQIATMRIPALQ |
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| Function | Receptor kinase-like protein Xa21 [UniProtKB/Swiss-Prot:Q1MX30] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_10g0000890 | OsLaMu_10g0000890.01 | Chr10 | 1664228 | 1665444 | + | NAM | ||
| CDS seq | atggagcacccaagtagtttctatgttgaatgtgaggcattgaaaagcattcgccatcggaaccttgtgagagtgattggcctatgttcaacctttgatacatcagggtttgaattcaaagcacTttttttttgcggtgatgaattcaaagcacttgttcttgagtttagatcaaatggcaaccttgaagtctggatcaatccaaaagtgcgcagtcaaagccccccaaaactgttaagagtagctgaagacattgccactgcattggactatcttcataaccgattcctcccttgtgactttggacttgcaaagtttcttcagaacaacattataagcctgggtgatgcatcaagcactaccagactgagagggtcaatcggatacattgcaccagagtatggcttggggtgcaaaatttcaatagaggatgatgtatatagttatggaattattgttccagagataatcataggaaagcgccctaacttcacagctttagcccctactctcacctatcatcatgaaggtgaagacccaaatcatgctgtggttgaaatgcaaacatccatagaattggctaagcttgggctaaagtgcacagagccatcaccaaaggatcgttcaacaatgtgcgatgaagatgacacaatcgttgacaacgaattgaagatgaaccagattgccaccatgagaatccctgcactgcagtag
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| Protein seq | MEHPSSFYVECEALKSIRHRNLVRVIGLCSTFDTSGFEFKALFFCGDEFKALVLEFRSNGNLEVWINPKVRSQSPPKLLRVAEDIATALDYLHNRFLPCDFGLAKFLQNNIISLGDASSTTRLRGSIGYIAPEYGLGCKISIEDDVYSYGIIVPEIIIGKRPNFTALAPTLTYHHEGEDPNHAVVEMQTSIELAKLGLKCTEPSPKDRSTMCDEDDTIVDNELKMNQIATMRIPALQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_10g0118100 | RBH | 0.000000 | 0.248552 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os10g02870 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os10g0118100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_10g0000930 | RBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_10g0000250 | SBH | 0.0 | 0.0 | 3.361494 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_10g0008000 | SBH | 0.0 | 0.0 | 2.505485 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_10G0008300 | SBH | 0 | 0.0099985 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_10G0026100 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_10g0000930 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_10g0008170 | SBH | 0.000000 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_10G000900 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_10g0000810 | RBH | 0.0 | 0.0 | 0.000000 |
