Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLaMu_06g0021510 OGI:06068070 | 16/16 LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) Chr06:25633462-25634951
Gene Symbol ERF1, Os06ERF, OsWR2, WR2, OsERF#001, OsERF001, OsERF1, AP2/EREBP#057, AP2/EREBP57, RD1, OsSHN, SHN
DNA seq

acacaattacaatgtttttatttacttttattagaagttgacaccacttatatatatgtagtctgatctctgatgacgttgatacatagcagagctttcaccagtatgactataatgacggggacgtcttgtacatacaagtaagtctttaataaatacacagcttcacttcacacagtagtaatcgatcttataattgtttcctaattaagctggatatgtagtagtaatagagatatacctatcatatgtagcaatcttaactgcctgtgcaccaaccaccctaccagatccttgatcttagatggtgacctgatcatgctgttttaaccttgcattttcaatttctttcctgttcttccggaattcagatgacgaggctaccttcaccaccgtgcagcagcccatgtgacggcgagcccgggccgctcctgcccagcagctcctcgatcatctgcagcgcgatcctctcctcgtcgtccattgccggaggtggtggcgacggcgagcccgtggtggacgtggacgtcgttgtgactgtgctgtcactcggagtcggctggtcgctggacgacgctgctgttgctgctgccaccttcgcagccgacgacacggccgtgtccttgttgagctcgacggtcatgacccagctggagtcagcgcgtgcgccggcgcgcttctgccagacgccaatgtgggacttctccgggtcgaggcggaggcaggtgagcgacggcgacggcgtcttgcagcacttgcggagcttggcgctgaggatctgagacaggctgttcccgccgccgttggccgtcattgaggacgagctgccgctgccgccgccgacacggccatcccgccctgccaccgcagccgccggtgtgagctcccccgtggcgttcctcgcgaccgggaagttggtcttggcgttacggccgctcatcaggatggcggcctcgtcgtacgcccgcgccgcctcctccgccgtctcaaaggtacccagccacaccctcctcttactgccacaacgcacgtagcaaaaaaaacatcatccatcattcatgcatgcacgcacccaagcacctcgagttagctactaacataccatgaaagagaaagaaaaaaagaaagaaagcaacaacaaaccagaaccactagctatccatcaaaatgtatctatcacgacagtggcataacacatcagagcaacatagctagctagtgatcatcactagtgagatagagacttacaggagagggtgcctgatctcggagacccaggagccccagtggcgctgcctgactccgcggaacttcttcttcgactgtcccatgatctcacctctgcagggatactgtccctgcagaattctcccaaggacacagcagaggaggcaggcagagtagaaggaatgagcagcagcagcagccagtcagtcagtcagacagtgagcctcctcctagtgtgggagtgctgggaggagtaaagttct

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CDS seq

atgggacagtcgaagaagaagttccgcggagtcaggcagcgccactggggctcctgggtctccgagatcaggcaccctctccttaagaggagggtgtggctgggtacctttgagacggcggaggaggcggcgcgggcgtacgacgaggccgccatcctgatgagcggccgtaacgccaagaccaacttcccggtcgcgaggaacgccacgggggagctcacaccggcggctgcggtggcagggcgggatggccgtgtcggcggcggcagcggcagctcgtcctcaatgacggccaacggcggcgggaacagcctgtctcagatcctcagcgccaagctccgcaagtgctgcaagacgccgtcgccgtcgctcacctgcctccgcctcgacccggagaagtcccacattggcgtctggcagaagcgcgccggcgcacgcgctgactccagctgggtcatgaccgtcgagctcaacaaggacacggccgtgtcgtcggctgcgaaggtggcagcagcaacagcagcgtcgtccagcgaccagccgactccgagtgacagcacagtcacaacgacgtccacgtccaccacgggctcgccgtcgccaccacctccggcaatggacgacgaggagaggatcgcgctgcagatgatcgaggagctgctgggcaggagcggcccgggctcgccgtcacatgggctgctgcacggtggtgaaggtagcctcgtcatctga

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Protein seq

MGQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVARNATGELTPAAAVAGRDGRVGGGSGSSSSMTANGGGNSLSQILSAKLRKCCKTPSPSLTCLRLDPEKSHIGVWQKRAGARADSSWVMTVELNKDTAVSSAAKVAAATAASSSDQPTPSDSTVTTTSTSTTGSPSPPPPAMDDEERIALQMIEELLGRSGPGSPSHGLLHGGEGSLVI

Function Ethylene-responsive transcription factor WIN1 [UniProtKB/Swiss-Prot:Q9XI33]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLaMu_06g0021510 OsLaMu_06g0021510.01 Chr06 25633462 25634951 - NAM
CDS seq

atgggacagtcgaagaagaagttccgcggagtcaggcagcgccactggggctcctgggtctccgagatcaggcaccctctccttaagaggagggtgtggctgggtacctttgagacggcggaggaggcggcgcgggcgtacgacgaggccgccatcctgatgagcggccgtaacgccaagaccaacttcccggtcgcgaggaacgccacgggggagctcacaccggcggctgcggtggcagggcgggatggccgtgtcggcggcggcagcggcagctcgtcctcaatgacggccaacggcggcgggaacagcctgtctcagatcctcagcgccaagctccgcaagtgctgcaagacgccgtcgccgtcgctcacctgcctccgcctcgacccggagaagtcccacattggcgtctggcagaagcgcgccggcgcacgcgctgactccagctgggtcatgaccgtcgagctcaacaaggacacggccgtgtcgtcggctgcgaaggtggcagcagcaacagcagcgtcgtccagcgaccagccgactccgagtgacagcacagtcacaacgacgtccacgtccaccacgggctcgccgtcgccaccacctccggcaatggacgacgaggagaggatcgcgctgcagatgatcgaggagctgctgggcaggagcggcccgggctcgccgtcacatgggctgctgcacggtggtgaaggtagcctcgtcatctga

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Protein seq

MGQSKKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVARNATGELTPAAAVAGRDGRVGGGSGSSSSMTANGGGNSLSQILSAKLRKCCKTPSPSLTCLRLDPEKSHIGVWQKRAGARADSSWVMTVELNKDTAVSSAAKVAAATAASSSDQPTPSDSTVTTTSTSTTGSPSPPPPAMDDEERIALQMIEELLGRSGPGSPSHGLLHGGEGSLVI

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.000000 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0604000 RBH 0.0 0.0 3.218880
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g40150 RBH 0.0 0.0 0.819982
Nipponbare | IRGSP 1.0 | RAP-db Os06g0604000 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0021710 RBH 0.0 0.000000 3.823379
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_06g0021560 RBH 0.000000 0.0 0.392045
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0021650 RBH 0.0 0.000000 4.970822
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0021360 RBH 0.0 0.000000 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0021770 RBH 0.0 0.0 3.190192
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0378200 RBH 1.950226 3.075568 4.4390705
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0021190 RBH 0.0 0.0 0.076893
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0356600 RBH 2.367245 4.322388 5.071691
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0021640 RBH 0.0 0.093856 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0021610 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0021280 RBH 0.0 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0021940 RBH 0.0 0.0 0.000000
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_02g0007720 RBH 0.149262 0.000000 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G021330 RBH 0.0 0.0 2.952387
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0021560 RBH 0.0 0.000000 2.985951
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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