Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_04g0027290 | OGI:04092930 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr04:32934498-32941301 | ||||||||
| Gene Symbol | XA1, Xa1(Xe), Xe, Xa1, Xa-1, RGAf, RGAg | ||||||||||
| DNA seq | atggaggaggtggaagccggtttgctggagggcgggatcaggtggctggcggagaccatcctggataacctggacgccgacaagctggatgagtggattcgccagattaggctcgccgctgacaccgagaagctacgggctgagatcgagaaggtggatggggtggtcgctgccgtgaaggggagggcgatcgggaacaggtcgctggcccgatctctcggccgtctcagggggttgctgtacgacgccgacgatgcggtcgacgagctcgactacttcaggctccagcagcaggtcgagggaggaggtactgtctttgcatatatccgtgccttttaattaagtttgcaagctgcgttgcctgcaacaatggcgtattggcgtcagtttccaatccatgcttgtgctacagttactacacggtttgaggctgaagagacggtcggagatggagcagaggacgaggacgatattccgatggacaatactgatgtaccggaggcagtggcggcaggcagcagcaagaaacggtccaaggcatgggaacactttactaccgtagagttcactgctgacgggaaggattctaaagcacggtgcaagtactgccacaaggacctatgttgcacatctaagaacgggacatcagctttgcgcaaccatctcaatgtttgcaagaggaaacgtgtaacaagtactgaccaaccggtaaatccatcaaggtaatgctaatggagttctgaatttagtgtaaatccgttgaagtgtaaatttggcccgttacatctgcttaagatctcattctgtctctaatcttctaatagccaactcatggtcattttttttcctaatatatagtaccggtgatggtgcaccaaatgtaattagatgcaaggaaacaaaagtgaacaattgtatatatcaaatataattatatctaaaacatgagtagtgtatcaaatccaattctttcaaaaatctactatgcaaaattgagtgacaaaatctgctgccttttttttttacagaaagcaaccaattaatataagtcaaatataaaaacgctttgtagtctccaataaaatagctcattgtttcgtttatacttatgtttataaatttaaatttaaaacttaaTtttggagttgattttgtggttttcttttcatcctattttattttacaacatttgattttgaatagttaagaatgcgtatataaaaattttacccataagttattttttaaattgttaataaatcgtaaggataatcataagtataagtgaaacgattcgctcttcatctacttaagattgcgttatattgctgacctttctaatcgcctaaccacgatcacatgctcttccagtgccggtgagggtgcatcaaatgcaactggtaattcagttggcagaaaaaggatgagaatggatgggacttcaacacaccacgaggcagttagcacgcacccttggaacaaggctgaactttccaacaggatccaatgcatgactcatcagttagaagaggctgtaaatgaggttatgaggctatgtcgatcctcaagttcaaaccagagtcgacagggtacaccaccggccacaaatgcaacaacatcgtcttatcttccggagcccatagtgtatgggagggctgcagagatggaaaccatcaaacagctgatcatgagcaatagatctaatggcataaccgtcctgccaattgtaggcaatggagggataggaaaaaccactttggcgcaactggtctgcaaagatctggtaattaaaagtcagtttaatgttaagatatgggtgtatgtatctgataaatttgatgtagttaagattacaaggcagattttggatcatgtctccaaccagagccacgaaggaataagcaaccttgatacgcttcagcaggatcttgaggaacaaatgaaatctaagaagttcctcattgtcttagatgatgtgtgggaaatccgtacagatgactggaaaaaactactggctcctttaagacctaaagatcaggtgaattcgtcacaggaagaggcaacaggtaatatgataattttgacaactcgtatacagagtattgccaaaagtcttggaacagtacaatcaattaagttagaagctctgaaagatgacgatatatggtcactatttaaagtgcatgcttttggtaatgataaacatgatagtagtccaggcttacaggttcttgggaagcaaattgctagcgagctaaaaggcaacccactggcagcaaaaactgtgggttcactattaggaacgaatcttaccatcgatcattgggatagcattataaagagtgaagaatggaaatccctgcaacaagcttatggcatcatgcaagcgctgaagttgagctatgatcatctatccaaccccttacagcaatgcgtctcttattgttctcttttccccaagggttattctttcagcaaagcacaactaatacaaatatggattgctcaaggatttgtggaagaatccagtgagaagttggagcagaaaggatggaaatatctagctgagttggtaaattcgggtttccttcagcaagttgaaagcacacggttttcatcagaatattttgttatgcacgatcttatgcatgatttagcgcaaaaggtttcacaaacagaatatgcaactatagatggctcagagtgcacagagttagccccaagtatacgccatttgtcaatagtaactgattctgcataccgcaaggagaaatatagaaacatatctcgtaatgaggtgtttgagaaaaggttgatgaaagttaagtcaaggagtaagttgaggtcactggtattaattgggcaatatgattctcatttttttaaatatttcaaagatgctttcaaggaagcacaacatctgcgactgctgcagatcactgcaacttatgctgattctgattcatttctctccagtttggtaaattctacacatctccggtatctgaaaattgtgaccgaagaatccggcagaactttgccccgatctctaaggaagtattaccatcttcaagtactagatattggctatagatttggaattccccgtatatctaatgatataaataatcttctcagcctgcggcatcttgttgcatatgatgaagtgtgttcttccattgctaacattggtaaaatgacctcacttcaggaactaggcaattttattgttcagaataatttaagtggttttgaggtgacacaattgaaatccatgaacaagcttgtacaacttagtgtgtctcagcttgaaaatgttagaactcaggaggaggcatgtggggcaaaactgaaagacaaacaacacttagaaaagctacatttgtcctggaaggatgcatggaatggatatgacagtgacgaaagctatgaagatgaatacggcagtgatatgaatatagaaacagaaggggaggaactgtcagttggtgatgccaatggtgcccaaagcttacaacatcacagtaatataagctctgaacttgcttcaagtgaggtgctcgaaggtcttgaaccacatcacggcctcaagtatctacggatatctgggtataatggatctacctccccaacttggcttccttcttcacttacctgtctgcaaacacttcatctagaaaaatgtggaaaatggcaaatacttcctttagaaaggctagggttacttgtaaagctcgtgttgatcaaaatgaggaatgcaacagaactctcaatcccttcactggaggagcttgtgttaattgcattgccaagcttgaacacatgctcctgcacttccatcaggaacttgaactccagtttaaaggttctgaaaattaagaattgccctgtactgaaggtatttcccttgtttgagatttcccagaaatttgaaatcgagcggacgtcgtcatggttgccccatcttagcaagcttaccatctataattatcctctttcctgtgtgcacagttctctgccaccttccgcaatcagtggttatggagaatatggaaggtgtacccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagtgttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaacctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagtgttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaacttttcatcagtgagtattctctagaaactctgcagccctgcttcctgacgaatctcacctgcttaaaacaattaagggtatcaggcaccacaagtttcaaatctctagaactgcaatcatgcactgcactcgaacatttgaagattcaaggttgtgcgtcgcttgctacattggaggggttgcaattcctccacgccctcaggcatatggaagtattcagatgccctggcttgcctccatatttggggagttcgtcagagcagggctatgagctatgcccacgactggaaaggctcgacatcgatgacccctctatccttaccacgtcgttctgcaagcacctcacctccctccaacgcctagagcttaactattgcggaagtgaagtggcaagactaacggatgagcaagagagagcgcttcagctcctcacgtccctgcaagagctccggtttaagtattgctacaatctcatagatcttcctgcggggctccacagccttccctccctcgagaggttggagatccggagttgcaggagcatcgcgaggctgccggagaagggcctcccaccttcgttcgaagaactggatatcatcgcttgcagtaatgagctagctcagcagtgcagaactctagcaagcactctgaaggtcaaaattaatgggggatatgtgaactgattactcggtggcttgttaggcgcacctttttccacctgcccaactggcgtgggctcgttcaggcgttcaagctgctgtaaattccattgccgcaatgacgaccttcagaaccgttacacaatacaaaggacatatgatggctagatcaactgtcgcagagctagctttggttcacctgaaaacataaggccaaacgcgtggttcttttaatcagaagtatcaaaaattggttttggtttttaacgaaaagatgttagaaattggttttaatgtgccagattctgtaccagaattctgtattttgctccgtaattctgtgctacgactgatgttgtatttaactgatagcaatcgaccggcaa
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| CDS seq | atggaggaggtggaagccggtttgctggagggcgggatcaggtggctggcggagaccatcctggataacctggacgccgacaagctggatgagtggattcgccagattaggctcgccgctgacaccgagaagctacgggctgagatcgagaaggtggatggggtggtcgctgccgtgaaggggagggcgatcgggaacaggtcgctggcccgatctctcggccgtctcagggggttgctgtacgacgccgacgatgcggtcgacgagctcgactacttcaggctccagcagcaggtcgagggaggagttactacacggtttgaggctgaagagacggtcggagatggagcagaggacgaggacgatattccgatggacaatactgatgtaccggaggcagtggcggcaggcagcagcaagaaacgtgccggtgagggtgcatcaaatgcaactggtaattcagttggcagaaaaaggatgagaatggatgggacttcaacacaccacgaggcagttagcacgcacccttggaacaaggctgaactttccaacaggatccaatgcatgactcatcagttagaagaggctgtaaatgaggttatgaggctatgtcgatcctcaagttcaaaccagagtcgacagggtacaccaccggccacaaatgcaacaacatcgtcttatcttccggagcccatagtgtatgggagggctgcagagatggaaaccatcaaacagctgatcatgagcaatagatctaatggcataaccgtcctgccaattgtaggcaatggagggataggaaaaaccactttggcgcaactggtctgcaaagatctggtaattaaaagtcagtttaatgttaagatatgggtgtatgtatctgataaatttgatgtagttaagattacaaggcagattttggatcatgtctccaaccagagccacgaaggaataagcaaccttgatacgcttcagcaggatcttgaggaacaaatgaaatctaagaagttcctcattgtcttagatgatgtgtgggaaatccgtacagatgactggaaaaaactactggctcctttaagacctaaagatcaggtgaattcgtcacaggaagaggcaacaggtaatatgataattttgacaactcgtatacagagtattgccaaaagtcttggaacagtacaatcaattaagttagaagctctgaaagatgacgatatatggtcactatttaaagtgcatgcttttggtaatgataaacatgatagtagtccaggcttacaggttcttgggaagcaaattgctagcgagctaaaaggcaacccactggcagcaaaaactgtgggttcactattaggaacgaatcttaccatcgatcattgggatagcattataaagagtgaagaatggaaatccctgcaacaagcttatggcatcatgcaagcgctgaagttgagctatgatcatctatccaaccccttacagcaatgcgtctcttattgttctcttttccccaagggttattctttcagcaaagcacaactaatacaaatatggattgctcaaggatttgtggaagaatccagtgagaagttggagcagaaaggatggaaatatctagctgagttggtaaattcgggtttccttcagcaagttgaaagcacacggttttcatcagaatattttgttatgcacgatcttatgcatgatttagcgcaaaaggtttcacaaacagaatatgcaactatagatggctcagagtgcacagagttagccccaagtatacgccatttgtcaatagtaactgattctgcataccgcaaggagaaatatagaaacatatctcgtaatgaggtgtttgagaaaaggttgatgaaagttaagtcaaggagtaagttgaggtcactggtattaattgggcaatatgattctcatttttttaaatatttcaaagatgctttcaaggaagcacaacatctgcgactgctgcagatcactgcaacttatgctgattctgattcatttctctccagtttggtaaattctacacatctccggtatctgaaaattgtgaccgaagaatccggcagaactttgccccgatctctaaggaagtattaccatcttcaagtactagatattggctatagatttggaattccccgtatatctaatgatataaataatcttctcagcctgcggcatcttgttgcatatgatgaagtgtgttcttccattgctaacattggtaaaatgacctcacttcaggaactaggcaattttattgttcagaataatttaagtggttttgaggtgacacaattgaaatccatgaacaagcttgtacaacttagtgtgtctcagcttgaaaatgttagaactcaggaggaggcatgtggggcaaaactgaaagacaaacaacacttagaaaagctacatttgtcctggaaggatgcatggaatggatatgacagtgacgaaagctatgaagatgaatacggcagtgatatgaatatagaaacagaaggggaggaactgtcagttggtgatgccaatggtgcccaaagcttacaacatcacagtaatataagctctgaacttgcttcaagtgaggtgctcgaaggtcttgaaccacatcacggcctcaagtatctacggatatctgggtataatggatctacctccccaacttggcttccttcttcacttacctgtctgcaaacacttcatctagaaaaatgtggaaaatggcaaatacttcctttagaaaggctagggttacttgtaaagctcgtgttgatcaaaatgaggaatgcaacagaactctcaatcccttcactggaggagcttgtgttaattgcattgccaagcttgaacacatgctcctgcacttccatcaggaacttgaactccagtttaaaggttctgaaaattaagaattgccctgtactgaaggtatttcccttgtttgagatttcccagaaatttgaaatcgagcggacgtcgtcatggttgccccatcttagcaagcttaccatctataattatcctctttcctgtgtgcacagttctctgccaccttccgcaatcagtggttatggagaatatggaaggtgtacccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagtgttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaacctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagtgttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaacttttcatcagtgagtattctctagaaactctgcagccctgcttcctgacgaatctcacctgcttaaaacaattaagggtatcaggcaccacaagtttcaaatctctagaactgcaatcatgcactgcactcgaacatttgaagattcaaggttgtgcgtcgcttgctacattggaggggttgcaattcctccacgccctcaggcatatggaagtattcagatgccctggcttgcctccatatttggggagttcgtcagagcagggctatgagctatgcccacgactggaaaggctcgacatcgatgacccctctatccttaccacgtcgttctgcaagcacctcacctccctccaacgcctagagcttaactattgcggaagtgaagtggcaagactaacggatgagcaagagagagcgcttcagctcctcacgtccctgcaagagctccggtttaagtattgctacaatctcatagatcttcctgcggggctccacagccttccctccctcgagaggttggagatccggagttgcaggagcatcgcgaggctgccggagaagggcctcccaccttcgttcgaagaactggatatcatcgcttgcagtaatgagctagctcagcagtgcagaactctagcaagcactctgaaggtcaaaattaatgggggatatgtgaactga
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| Protein seq | MEEVEAGLLEGGIRWLAETILDNLDADKLDEWIRQIRLAADTEKLRAEIEKVDGVVAAVKGRAIGNRSLARSLGRLRGLLYDADDAVDELDYFRLQQQVEGGVTTRFEAEETVGDGAEDEDDIPMDNTDVPEAVAAGSSKKRAGEGASNATGNSVGRKRMRMDGTSTHHEAVSTHPWNKAELSNRIQCMTHQLEEAVNEVMRLCRSSSSNQSRQGTPPATNATTSSYLPEPIVYGRAAEMETIKQLIMSNRSNGITVLPIVGNGGIGKTTLAQLVCKDLVIKSQFNVKIWVYVSDKFDVVKITRQILDHVSNQSHEGISNLDTLQQDLEEQMKSKKFLIVLDDVWEIRTDDWKKLLAPLRPKDQVNSSQEEATGNMIILTTRIQSIAKSLGTVQSIKLEALKDDDIWSLFKVHAFGNDKHDSSPGLQVLGKQIASELKGNPLAAKTVGSLLGTNLTIDHWDSIIKSEEWKSLQQAYGIMQALKLSYDHLSNPLQQCVSYCSLFPKGYSFSKAQLIQIWIAQGFVEESSEKLEQKGWKYLAELVNSGFLQQVESTRFSSEYFVMHDLMHDLAQKVSQTEYATIDGSECTELAPSIRHLSIVTDSAYRKEKYRNISRNEVFEKRLMKVKSRSKLRSLVLIGQYDSHFFKYFKDAFKEAQHLRLLQITATYADSDSFLSSLVNSTHLRYLKIVTEESGRTLPRSLRKYYHLQVLDIGYRFGIPRISNDINNLLSLRHLVAYDEVCSSIANIGKMTSLQELGNFIVQNNLSGFEVTQLKSMNKLVQLSVSQLENVRTQEEACGAKLKDKQHLEKLHLSWKDAWNGYDSDESYEDEYGSDMNIETEGEELSVGDANGAQSLQHHSNISSELASSEVLEGLEPHHGLKYLRISGYNGSTSPTWLPSSLTCLQTLHLEKCGKWQILPLERLGLLVKLVLIKMRNATELSIPSLEELVLIALPSLNTCSCTSIRNLNSSLKVLKIKNCPVLKVFPLFEISQKFEIERTSSWLPHLSKLTIYNYPLSCVHSSLPPSAISGYGEYGRCTLPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEELIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEELIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEELIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEELIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEVLIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEVLIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELFISEYSLETLQPCFLTNLTCLKQLRVSGTTSFKSLELQSCTALEHLKIQGCASLATLEGLQFLHALRHMEVFRCPGLPPYLGSSSEQGYELCPRLERLDIDDPSILTTSFCKHLTSLQRLELNYCGSEVARLTDEQERALQLLTSLQELRFKYCYNLIDLPAGLHSLPSLERLEIRSCRSIARLPEKGLPPSFEELDIIACSNELAQQCRTLASTLKVKINGGYVN |
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| Function | Putative disease resistance protein RGA4 [UniProtKB/Swiss-Prot:Q7XA39] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_04g0027290 | OsLaMu_04g0027290.01 | Chr04 | 32934498 | 32941301 | + | NAM | ||
| CDS seq | atggaggaggtggaagccggtttgctggagggcgggatcaggtggctggcggagaccatcctggataacctggacgccgacaagctggatgagtggattcgccagattaggctcgccgctgacaccgagaagctacgggctgagatcgagaaggtggatggggtggtcgctgccgtgaaggggagggcgatcgggaacaggtcgctggcccgatctctcggccgtctcagggggttgctgtacgacgccgacgatgcggtcgacgagctcgactacttcaggctccagcagcaggtcgagggaggagttactacacggtttgaggctgaagagacggtcggagatggagcagaggacgaggacgatattccgatggacaatactgatgtaccggaggcagtggcggcaggcagcagcaagaaacgtgccggtgagggtgcatcaaatgcaactggtaattcagttggcagaaaaaggatgagaatggatgggacttcaacacaccacgaggcagttagcacgcacccttggaacaaggctgaactttccaacaggatccaatgcatgactcatcagttagaagaggctgtaaatgaggttatgaggctatgtcgatcctcaagttcaaaccagagtcgacagggtacaccaccggccacaaatgcaacaacatcgtcttatcttccggagcccatagtgtatgggagggctgcagagatggaaaccatcaaacagctgatcatgagcaatagatctaatggcataaccgtcctgccaattgtaggcaatggagggataggaaaaaccactttggcgcaactggtctgcaaagatctggtaattaaaagtcagtttaatgttaagatatgggtgtatgtatctgataaatttgatgtagttaagattacaaggcagattttggatcatgtctccaaccagagccacgaaggaataagcaaccttgatacgcttcagcaggatcttgaggaacaaatgaaatctaagaagttcctcattgtcttagatgatgtgtgggaaatccgtacagatgactggaaaaaactactggctcctttaagacctaaagatcaggtgaattcgtcacaggaagaggcaacaggtaatatgataattttgacaactcgtatacagagtattgccaaaagtcttggaacagtacaatcaattaagttagaagctctgaaagatgacgatatatggtcactatttaaagtgcatgcttttggtaatgataaacatgatagtagtccaggcttacaggttcttgggaagcaaattgctagcgagctaaaaggcaacccactggcagcaaaaactgtgggttcactattaggaacgaatcttaccatcgatcattgggatagcattataaagagtgaagaatggaaatccctgcaacaagcttatggcatcatgcaagcgctgaagttgagctatgatcatctatccaaccccttacagcaatgcgtctcttattgttctcttttccccaagggttattctttcagcaaagcacaactaatacaaatatggattgctcaaggatttgtggaagaatccagtgagaagttggagcagaaaggatggaaatatctagctgagttggtaaattcgggtttccttcagcaagttgaaagcacacggttttcatcagaatattttgttatgcacgatcttatgcatgatttagcgcaaaaggtttcacaaacagaatatgcaactatagatggctcagagtgcacagagttagccccaagtatacgccatttgtcaatagtaactgattctgcataccgcaaggagaaatatagaaacatatctcgtaatgaggtgtttgagaaaaggttgatgaaagttaagtcaaggagtaagttgaggtcactggtattaattgggcaatatgattctcatttttttaaatatttcaaagatgctttcaaggaagcacaacatctgcgactgctgcagatcactgcaacttatgctgattctgattcatttctctccagtttggtaaattctacacatctccggtatctgaaaattgtgaccgaagaatccggcagaactttgccccgatctctaaggaagtattaccatcttcaagtactagatattggctatagatttggaattccccgtatatctaatgatataaataatcttctcagcctgcggcatcttgttgcatatgatgaagtgtgttcttccattgctaacattggtaaaatgacctcacttcaggaactaggcaattttattgttcagaataatttaagtggttttgaggtgacacaattgaaatccatgaacaagcttgtacaacttagtgtgtctcagcttgaaaatgttagaactcaggaggaggcatgtggggcaaaactgaaagacaaacaacacttagaaaagctacatttgtcctggaaggatgcatggaatggatatgacagtgacgaaagctatgaagatgaatacggcagtgatatgaatatagaaacagaaggggaggaactgtcagttggtgatgccaatggtgcccaaagcttacaacatcacagtaatataagctctgaacttgcttcaagtgaggtgctcgaaggtcttgaaccacatcacggcctcaagtatctacggatatctgggtataatggatctacctccccaacttggcttccttcttcacttacctgtctgcaaacacttcatctagaaaaatgtggaaaatggcaaatacttcctttagaaaggctagggttacttgtaaagctcgtgttgatcaaaatgaggaatgcaacagaactctcaatcccttcactggaggagcttgtgttaattgcattgccaagcttgaacacatgctcctgcacttccatcaggaacttgaactccagtttaaaggttctgaaaattaagaattgccctgtactgaaggtatttcccttgtttgagatttcccagaaatttgaaatcgagcggacgtcgtcatggttgccccatcttagcaagcttaccatctataattatcctctttcctgtgtgcacagttctctgccaccttccgcaatcagtggttatggagaatatggaaggtgtacccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagagttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagtgttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaacctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaactttacatccatgagtattctcaagaaactctgcagccctgcttttcagggaacctcactctcctgagaaaattacatgtactgggaaactcaaatttagtgtctctgcagctccattcctgcacagcactcgaagtgttgataattcaaagctgtgagtctcttagttctctggatggcttgcaattgcttggcaatctcaggttgctgcaggcacatagatgcctcagtggtcatggagaagatggaaggtgtatccttccgcaatcacttgaggaacttttcatcagtgagtattctctagaaactctgcagccctgcttcctgacgaatctcacctgcttaaaacaattaagggtatcaggcaccacaagtttcaaatctctagaactgcaatcatgcactgcactcgaacatttgaagattcaaggttgtgcgtcgcttgctacattggaggggttgcaattcctccacgccctcaggcatatggaagtattcagatgccctggcttgcctccatatttggggagttcgtcagagcagggctatgagctatgcccacgactggaaaggctcgacatcgatgacccctctatccttaccacgtcgttctgcaagcacctcacctccctccaacgcctagagcttaactattgcggaagtgaagtggcaagactaacggatgagcaagagagagcgcttcagctcctcacgtccctgcaagagctccggtttaagtattgctacaatctcatagatcttcctgcggggctccacagccttccctccctcgagaggttggagatccggagttgcaggagcatcgcgaggctgccggagaagggcctcccaccttcgttcgaagaactggatatcatcgcttgcagtaatgagctagctcagcagtgcagaactctagcaagcactctgaaggtcaaaattaatgggggatatgtgaactga
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| Protein seq | MEEVEAGLLEGGIRWLAETILDNLDADKLDEWIRQIRLAADTEKLRAEIEKVDGVVAAVKGRAIGNRSLARSLGRLRGLLYDADDAVDELDYFRLQQQVEGGVTTRFEAEETVGDGAEDEDDIPMDNTDVPEAVAAGSSKKRAGEGASNATGNSVGRKRMRMDGTSTHHEAVSTHPWNKAELSNRIQCMTHQLEEAVNEVMRLCRSSSSNQSRQGTPPATNATTSSYLPEPIVYGRAAEMETIKQLIMSNRSNGITVLPIVGNGGIGKTTLAQLVCKDLVIKSQFNVKIWVYVSDKFDVVKITRQILDHVSNQSHEGISNLDTLQQDLEEQMKSKKFLIVLDDVWEIRTDDWKKLLAPLRPKDQVNSSQEEATGNMIILTTRIQSIAKSLGTVQSIKLEALKDDDIWSLFKVHAFGNDKHDSSPGLQVLGKQIASELKGNPLAAKTVGSLLGTNLTIDHWDSIIKSEEWKSLQQAYGIMQALKLSYDHLSNPLQQCVSYCSLFPKGYSFSKAQLIQIWIAQGFVEESSEKLEQKGWKYLAELVNSGFLQQVESTRFSSEYFVMHDLMHDLAQKVSQTEYATIDGSECTELAPSIRHLSIVTDSAYRKEKYRNISRNEVFEKRLMKVKSRSKLRSLVLIGQYDSHFFKYFKDAFKEAQHLRLLQITATYADSDSFLSSLVNSTHLRYLKIVTEESGRTLPRSLRKYYHLQVLDIGYRFGIPRISNDINNLLSLRHLVAYDEVCSSIANIGKMTSLQELGNFIVQNNLSGFEVTQLKSMNKLVQLSVSQLENVRTQEEACGAKLKDKQHLEKLHLSWKDAWNGYDSDESYEDEYGSDMNIETEGEELSVGDANGAQSLQHHSNISSELASSEVLEGLEPHHGLKYLRISGYNGSTSPTWLPSSLTCLQTLHLEKCGKWQILPLERLGLLVKLVLIKMRNATELSIPSLEELVLIALPSLNTCSCTSIRNLNSSLKVLKIKNCPVLKVFPLFEISQKFEIERTSSWLPHLSKLTIYNYPLSCVHSSLPPSAISGYGEYGRCTLPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEELIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEELIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEELIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEELIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEVLIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELYIHEYSQETLQPCFSGNLTLLRKLHVLGNSNLVSLQLHSCTALEVLIIQSCESLSSLDGLQLLGNLRLLQAHRCLSGHGEDGRCILPQSLEELFISEYSLETLQPCFLTNLTCLKQLRVSGTTSFKSLELQSCTALEHLKIQGCASLATLEGLQFLHALRHMEVFRCPGLPPYLGSSSEQGYELCPRLERLDIDDPSILTTSFCKHLTSLQRLELNYCGSEVARLTDEQERALQLLTSLQELRFKYCYNLIDLPAGLHSLPSLERLEIRSCRSIARLPEKGLPPSFEELDIIACSNELAQQCRTLASTLKVKINGGYVN
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.118455 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0623066 | RBH | 0.651313 | 0.0 | 2.022301 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g53120 | RBH | 1.143008 | 1.394336 | 0.197501 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0623066 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0027000 | RBH | 0.0 | 0.0 | 1.115638 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0027790 | RBH | 0.000000 | 0.198818 | 0.117967 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0027580 | SBH | 0.0 | 1.069617 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0027190 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0027490 | RBH | 1.942373 | 0.0 | 1.000503 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0498100 | RBH | 1.1873085 | 3.438363 | 0.2193595 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0026370 | SBH | 0.000000 | 0.286755 | 0.000000 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0503700 | SBH | 0.9564555 | 3.0302275 | 0.485191 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0026730 | RBH | 0.235404 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0026600 | RBH | 0.466128 | 0.514007 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0026620 | RBH | 3.561647 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0027100 | RBH | 0.155927 | 0.0 | 0.127634 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0027220 | RBH | 0.000000 | 2.331701 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G026470 | RBH | 0.331817 | 0.000000 | 0.035477 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0026390 | SBH | 0.0 | 2.690549 | 0.000000 |
