Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_04g0022310 | OGI:04082200 | 14/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr04:28499883-28504440 | ||||||||
| Gene Symbol | OsDjA6, DjA6 | ||||||||||
| DNA seq | ctctctcggtcgcgtggcttgagcggtggtgacaccgctcgcctccgtccgcctcgcctccaccgagaggttctctctgccgccgattcaggtacgatcgcttcactacgccccaatctttcatggccgagactctcctaaggaccggttggatcgcgtatgagccccccgtgatttttctggaggggggaaaccgagtgtattttttgcttgttctgcgccgttttcttggctgttctaccgatcttgttggttggattcttcggaggagaggtggagccttgtcctgatttggaggggaggcgaagttttccagggttgtgtaggacacctcgtgggggttcgcggtggctggagaaatattcgtgatcagctctccttaggggatttttttttttaccttagttgtctgctccgctcgaaacacagagttcggtGgggatgagactagattttccttcgattttccggatgtttttgagttgggtgccaaatatgttaaaagttcaatgtggtcaggcacttgcgcatgtggtggagtcgtccttctacgattttttgttggttttatatttgttgtaaatgcgtaaaattagctcccattttagtttgtttaacagaactgattacattttatattactagcatattactgatcgttgagtacggagtatatatattaaaattacagtgatccttggcctttttactctctgtttggcatttcggtggctgttcaaaagccatagtttatttcgatgtttgattaaaaattgttactataagcattttaattatagttgtaacagggaaacaaagtcatactaggattagtaaaattcccctattttgagtagactccaatgcacaatatgtcaccgactcaaccactgcagactgacccttagttctacagatttacagggagattatcttgtgatctgtaaacatgtttgggcgtgtaccgaggagtaacaacaccaagtactatgaggttcttggagttcctaaaactgcaagcaaggatgagctaaagaaggcataccggaaggctgccataaaaaaccatcctgacaagggaggggatccagaaaaggtgaggatgtgccagtgtgacatgcaattgtttgaattcagaatctctattttgtttttacatttttatgtgttttacagtttaaagaattatcacaagcgtatgaggttctcactgatcctgagaagagagacatatatgaccaatatggggaggatgctcttaaggatggaatgggaggaggcagtgacttccataatccatttgacatatttgagcagtttttcgggggtggtgcctttgggggtaagcaacatatgtaccctgaaattttccagcaccctcaacatttttttgtttgaactttttttttaaaaaaaaacagaattattcatgctaacttttatggttaacagggagtagctcaagagtacgcagacagagacgtggtgaagatgtggcgcatactttgaaggtgtctttagaagatgtgtataatggatctatgaagaaactatcattatcacgaaatattctgtgcccaaagtgcaaagggtaagcctttgtatgttattgctgcacttcaatttgctaactggaggaaatgatgtactcattatttggcaaaattattacttatcatgctctttcactttagcattatcgatacatatgattccatctagttgaaaataaggtgtaaatagttatcccgaagtgttcactgtaatttctctatattgctagtttaaatccatcaactggtgattgtatttgttttgtattttcgtgcgcacttatttctattatttttgcatgtacttgagatgcagggaaacccagttaaatgtttcggttactggataatcccttaacattatcccattccatttatgttctgtttcaacctatccataaaaaaaatcattaatgagagacctaatgctaacggatacatgcttgtgtcagccaacaatgttagaagatatccttacatttatccacactgcttctattcttgaatcttttattgaattaaaaaaaggtgcaaacgtaattttatagaacctgaaccatccccaaaagtccaaaactagtttaataagggtatcttgcacatttggggaatatgttggactccatgctaaagccaatgtttattatagtcctacatatctatactcctctaaaagaccccaatggtggtggtgagtattgaatttgccaccacccaccaccactgcatgtgggtcccccaaatagtgaggtaggtggacttttgccccttccccaacctcaagccatcaaacagaaaatttttcttttgaagtgaggtaaaaatgatgacaaataatatgactagaagattttacaatgagaataattttattaatttttgaggctgtaaagtgtatggaggagttctcttcatgttgcaatgcaggggcattcagatagtataattatagaataacatatgtagtatgtaaatcctgattaagatggctgtgaattggcctatataatgccaagcttgcaataccgactaccgaatacctagtctaattttgactgcctctgtaaatacgacatctaatgtgcaatgaaagctaacctcccattttataaagaaatagacagtgcacccaatcaaatagacagtgcctattgaaatgcttcatcccagtaaagctttaaaaataagtccagcccagttaaaacacattacacagatcaaatacatctatatggccgatttcaacccaggtttattcaccattctgaggcgtagctagctctatcaccataattagtttagtttatcattcaaaatatatacgaggcaaaattcatgttttttttgtggcccatttcaatccaggtttattcaccattctgaggggccctgtaaaattccttctataaatatagaagaggcaaaggttttgcccttcattcaaaaaaataattagtttatcatgttttttttatctgttttgagtgttgactgtagtgtttcaccttttccatcttactctctgctttcagaaaagggaccaaatctgaggctccagcaacatgctatggttgtcatggtgtaggaatgaggaatataatgcgacagataggactaggcatgattcaacatatgcagactgtctgtcctgaatgcagaggatcaggtatgcaacagttgctccaatttttatgctatatcttgctgcaaaattgtgatttcttaggagcctgctttatgtttgtaatgttctatacttgatcaggtgagatcataagtgacagggataaatgcacaaactgcagagctagcaaagttattcaggagaaaaaggtgcttgaggttcatattgagaagggaatgcaacatggccaaaaaattgtattccaaggtgaagctgatgaagctgtaagtttattttgtccatttatactagtatacatacttgcagccacatattcatccatccttgtgctaatgaatatctgtgcatgcactactttctttatctaatattttgcactgtgtgtttcatgctgttgcagcctgatacagtgacaggagatatagtatttatcttgcaagttaaggtacatccaagatttaagaggaaatatgatgacctgttcattgagcgcacaatctctttaactgaggcattgtgtgggttccaattcatcctcactcatctggacagtaggcagctcctaatcaaggcaaatcctggcgaaattattaaacctggtatctcatccccttaaaatgctagcctttttgtttgccacttcgtaattctgttttttctattcagattctaatcagttgcagacttttttaaagaattaactcaaatattttccaaacaggtcaacacaaggccataaatgatgagggaatgccacaccatggccggcctttcatgaagggccgtctctttgtggaattcaatgttgagttccctgaatctggtgtactctcccgtgaccaatgccgggcacttgagatgatcctaccacctaaacctgggcaccaattatcagatatggacctggatcaatgtgaggaaactaccatgcatgatgtgaacatagaagaggagatgaggcgcaagcagtatcaaaggaagcaggaagcgtacgacgaagatgaggaggaggatgctccaagagtacagtgtgctcaacagtaagaagtgtcactttctggcgcaagtgatgatactccatgtaaactaagtagtttttggtgagactgttcattttagtgtattttgtactagttaaattaaatagtgaatgtctaagttgtgtcgtttgatatataagcttgtgctaacaacataaggctttcttggccttcataagatatactcctacctaggagaaagtggtggatgagcattcgtttctgtttttattggtaatgaacatatttacatgttgtattgactgaaaatggtatgctgaagggtcttcgatgcgtctctgtttgggatgctgagtaca
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| CDS seq | atgtttgggcgtgtaccgaggagtaacaacaccaagtactatgaggttcttggagttcctaaaactgcaagcaaggatgagctaaagaaggcataccggaaggctgccataaaaaaccatcctgacaagggaggggatccagaaaagtttaaagaattatcacaagcgtatgaggttctcactgatcctgagaagagagacatatatgaccaatatggggaggatgctcttaaggatggaatgggaggaggcagtgacttccataatccatttgacatatttgagcagtttttcgggggtggtgcctttggggggagtagctcaagagtacgcagacagagacgtggtgaagatgtggcgcatactttgaaggtgtctttagaagatgtgtataatggatctatgaagaaactatcattatcacgaaatattctgtgcccaaagtgcaaaggaaaagggaccaaatctgaggctccagcaacatgctatggttgtcatggtgtaggaatgaggaatataatgcgacagataggactaggcatgattcaacatatgcagactgtctgtcctgaatgcagaggatcaggtgagatcataagtgacagggataaatgcacaaactgcagagctagcaaagttattcaggagaaaaaggtgcttgaggttcatattgagaagggaatgcaacatggccaaaaaattgtattccaaggtgaagctgatgaagctcctgatacagtgacaggagatatagtatttatcttgcaagttaaggtacatccaagatttaagaggaaatatgatgacctgttcattgagcgcacaatctctttaactgaggcattgtgtgggttccaattcatcctcactcatctggacagtaggcagctcctaatcaaggcaaatcctggcgaaattattaaacctggtcaacacaaggccataaatgatgagggaatgccacaccatggccggcctttcatgaagggccgtctctttgtggaattcaatgttgagttccctgaatctggtgtactctcccgtgaccaatgccgggcacttgagatgatcctaccacctaaacctgggcaccaattatcagatatggacctggatcaatgtgaggaaactaccatgcatgatgtgaacatagaagaggagatgaggcgcaagcagtatcaaaggaagcaggaagcgtacgacgaagatgaggaggaggatgctccaagagtacagtgtgctcaacagtaa
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| Protein seq | MFGRVPRSNNTKYYEVLGVPKTASKDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYEVLTDPEKRDIYDQYGEDALKDGMGGGSDFHNPFDIFEQFFGGGAFGGSSSRVRRQRRGEDVAHTLKVSLEDVYNGSMKKLSLSRNILCPKCKGKGTKSEAPATCYGCHGVGMRNIMRQIGLGMIQHMQTVCPECRGSGEIISDRDKCTNCRASKVIQEKKVLEVHIEKGMQHGQKIVFQGEADEAPDTVTGDIVFILQVKVHPRFKRKYDDLFIERTISLTEALCGFQFILTHLDSRQLLIKANPGEIIKPGQHKAINDEGMPHHGRPFMKGRLFVEFNVEFPESGVLSRDQCRALEMILPPKPGHQLSDMDLDQCEETTMHDVNIEEEMRRKQYQRKQEAYDEDEEEDAPRVQCAQQ |
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| Function | Chaperone protein dnaJ A6 [UniProtKB/Swiss-Prot:Q0JB88] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_04g0022310 | OsLaMu_04g0022310.01 | Chr04 | 28499883 | 28504440 | + | NAM | ||
| CDS seq | atgtttgggcgtgtaccgaggagtaacaacaccaagtactatgaggttcttggagttcctaaaactgcaagcaaggatgagctaaagaaggcataccggaaggctgccataaaaaaccatcctgacaagggaggggatccagaaaagtttaaagaattatcacaagcgtatgaggttctcactgatcctgagaagagagacatatatgaccaatatggggaggatgctcttaaggatggaatgggaggaggcagtgacttccataatccatttgacatatttgagcagtttttcgggggtggtgcctttggggggagtagctcaagagtacgcagacagagacgtggtgaagatgtggcgcatactttgaaggtgtctttagaagatgtgtataatggatctatgaagaaactatcattatcacgaaatattctgtgcccaaagtgcaaaggaaaagggaccaaatctgaggctccagcaacatgctatggttgtcatggtgtaggaatgaggaatataatgcgacagataggactaggcatgattcaacatatgcagactgtctgtcctgaatgcagaggatcagtgacagggataaatgcacaaactgcagagctagcaaagttattcaggagaaaaaggtgcttgaggttcatattgagaagggaatgcaacatggccaaaaaattgtattccaagcctgatacagtgacaggagatatagtatttatcttgcaagttaaggtacatccaagatttaagaggaaatatgatgacctgttcattgagcgcacaatctctttaactgaggcattgtgtgggttccaattcatcctcactcatctggacagtaggcagctcctaatcaaggcaaatcctggcgaaattattaaacctggtcaacacaaggccataaatgatgagggaatgccacaccatggccggcctttcatgaagggccgtctctttgtggaattcaatgttgagttccctgaatctggtgtactctcccgtgaccaatgccgggcacttgagatgatcctaccacctaaacctgggcaccaattatcagatatggacctggatcaatgtgaggaaactaccatgcatgatgtgaacatagaagaggagatgaggcgcaagcagtatcaaaggaagcaggaagcgtacgacgaagatgaggaggaggatgctccaagagtacagtgtgctcaacagtaa
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| Protein seq | MFGRVPRSNNTKYYEVLGVPKTASKDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYEVLTDPEKRDIYDQYGEDALKDGMGGGSDFHNPFDIFEQFFGGGAFGGSSSRVRRQRRGEDVAHTLKVSLEDVYNGSMKKLSLSRNILCPKCKGKGTKSEAPATCYGCHGVGMRNIMRQIGLGMIQHMQTVCPECRGSVTGINAQTAELAKLFRRKRCLRFILRRECNMAKKLYSKPDTVTGDIVFILQVKVHPRFKRKYDDLFIERTISLTEALCGFQFILTHLDSRQLLIKANPGEIIKPGQHKAINDEGMPHHGRPFMKGRLFVEFNVEFPESGVLSRDQCRALEMILPPKPGHQLSDMDLDQCEETTMHDVNIEEEMRRKQYQRKQEAYDEDEEEDAPRVQCAQQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_04g0022310 | OsLaMu_04g0022310.02 | Chr04 | 28499883 | 28504440 | + | NAM | ||
| CDS seq | atgtttgggcgtgtaccgaggagtaacaacaccaagtactatgaggttcttggagttcctaaaactgcaagcaaggatgagctaaagaaggcataccggaaggctgccataaaaaaccatcctgacaagggaggggatccagaaaagtttaaagaattatcacaagcgtatgaggttctcactgatcctgagaagagagacatatatgaccaatatggggaggatgctcttaaggatggaatgggaggaggcagtgacttccataatccatttgacatatttgagcagtttttcgggggtggtgcctttggggggagtagctcaagagtacgcagacagagacgtggtgaagatgtggcgcatactttgaaggtgtctttagaagatgtgtataatggatctatgaagaaactatcattatcacgaaatattctgtgcccaaagtgcaaaggaaaagggaccaaatctgaggctccagcaacatgctatggttgtcatggtgtaggaatgaggaatataatgcgacagataggactaggcatgattcaacatatgcagactgtctgtcctgaatgcagaggatcaggtgagatcataagtgacagggataaatgcacaaactgcagagctagcaaagttattcaggagaaaaaggtgcttgaggttcatattgagaagggaatgcaacatggccaaaaaattgtattccaaggtgaagctgatgaagctcctgatacagtgacaggagatatagtatttatcttgcaagttaaggtacatccaagatttaagaggaaatatgatgacctgttcattgagcgcacaatctctttaactgaggcattgtgtgggttccaattcatcctcactcatctggacagtaggcagctcctaatcaaggcaaatcctggcgaaattattaaacctggtcaacacaaggccataaatgatgagggaatgccacaccatggccggcctttcatgaagggccgtctctttgtggaattcaatgttgagttccctgaatctggtgtactctcccgtgaccaatgccgggcacttgagatgatcctaccacctaaacctgggcaccaattatcagatatggacctggatcaatgtgaggaaactaccatgcatgatgtgaacatagaagaggagatgaggcgcaagcagtatcaaaggaagcaggaagcgtacgacgaagatgaggaggaggatgctccaagagtacagtgtgctcaacagtaa
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| Protein seq | MFGRVPRSNNTKYYEVLGVPKTASKDELKKAYRKAAIKNHPDKGGDPEKFKELSQAYEVLTDPEKRDIYDQYGEDALKDGMGGGSDFHNPFDIFEQFFGGGAFGGSSSRVRRQRRGEDVAHTLKVSLEDVYNGSMKKLSLSRNILCPKCKGKGTKSEAPATCYGCHGVGMRNIMRQIGLGMIQHMQTVCPECRGSGEIISDRDKCTNCRASKVIQEKKVLEVHIEKGMQHGQKIVFQGEADEAPDTVTGDIVFILQVKVHPRFKRKYDDLFIERTISLTEALCGFQFILTHLDSRQLLIKANPGEIIKPGQHKAINDEGMPHHGRPFMKGRLFVEFNVEFPESGVLSRDQCRALEMILPPKPGHQLSDMDLDQCEETTMHDVNIEEEMRRKQYQRKQEAYDEDEEEDAPRVQCAQQ
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_04g0022310 | OsLaMu_04g0022310.03 | Chr04 | 28499883 | 28504356 | + | IsoSeq | ||
| CDS seq | ctctctcggtcgcgtggcttgagcggtggtgacaccgctcgcctccgtccgcctcgcctccaccgagaggttctctctgccgccgattcagatttacagggagattatcttgtgatctgtaaacatgtttgggcgtgtaccgag |
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| Protein seq | LSRSRGLSGGDTARLRPPRLHREVLSAADSDLQGDYLVICKHVWACTE |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr04 | 28503101 | 28503241 | + | OsLaMu_04g0022310.01 | OsLaMu_04g0022310.01,OsLaMu_04g0022310.03 | All |
| A3 | Chr04 | 28503101 | 28503241 | + | OsLaMu_04g0022310.02 | OsLaMu_04g0022310.03,OsLaMu_04g0022310.02 | All |
| A3 | Chr04 | 28503101 | 28503214 | + | OsLaMu_04g0022310.02 | OsLaMu_04g0022310.01,OsLaMu_04g0022310.02 | All |
| A5 | Chr04 | 28503326 | 28503481 | + | OsLaMu_04g0022310.03,OsLaMu_04g0022310.02 | OsLaMu_04g0022310.03,OsLaMu_04g0022310.01,OsLaMu_04g0022310.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 11.420991 | 7.583427 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0549600 | RBH | 21.424591 | 17.743742 | 120.471420 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g46390 | RBH | 13.909827 | 11.346310 | 27.106821 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0549600 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0022100 | RBH | 28.791008 | 87.755119 | 128.405975 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_04g0022840 | RBH | 8.681085 | 7.995203 | 50.293095 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0022560 | RBH | 58.975628 | 38.164558 | 146.562515 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0022310 | RBH | 8.755523 | 0.977868 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0022470 | RBH | 97.754585 | 43.477955 | 335.642151 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0433600 | SBH | 37.6964645 | 100.3062175 | 47.92621 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0021290 | RBH | 8.948435 | 3.254234 | 22.286716 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0434000 | SBH | 57.7979965 | 116.9100265 | 41.744154 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0021790 | RBH | 2.211982 | 0.397482 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0021620 | RBH | 4.313240 | 16.091450 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0021710 | RBH | 89.301353 | 64.986984 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0022130 | RBH | 8.735894 | 2.286222 | 17.414707 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0026990 | RBH | 1.558203 | 46.056595 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G021540 | RBH | 9.488891 | 8.132579 | 41.841885 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0021470 | RBH | 33.719158 | 130.337601 | 151.927002 |
