Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsLaMu_03g0020640 OGI:03043900 | 16/16 LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) Chr03:17127543-17130087
Gene Symbol -
DNA seq

aattccatggtaatacacatttatttttataaggtgtaacaTgtagctatAatttctactgcaaaggcgtcctatggtcggtgagtttatacataatAatgttgtacaaaaagataatgatctgaagttctctaattacaaaggtaacagagaagaagacaagaaatgcaattactgacacactgatatcttcttttgtaggatactcagtgccattaaagaagaacccagtgccatttttaggacgaggatgacctgcagctgaacgccatgacagtagtggatcaccaagaaaagatagctcactgaaagtggagagctgaccactgcttggaacctcgcccgtgagaagaggattgtatgacacgttgaattgactcagtttagagagcttttcaaggctcgacggtagtgagccagagaaattattgcatgacaaatcgaggctctcaatggaacccAaattgcctatctcgaacggaatctcaCccgaaatagaattgttcgatgcattcaaagaaaccagttgaagagagccaatctctgatggtaggtgcccagagaggcggttgccatcgagaaggagcaagctgatgttcttcatggcaccgattgcagagggtatctgcccagacagcagattacctgacaactgaacataccctaatgctgttcgtaatggagaagatgctggaagtatgtcataccccatcaacagtcGgttccatatggtgcggcagttcttgtgtgagaacatcatcgattggacatagtcaaactctgggtaacttgatgggacccaacggtatacagcaaggcatttgctggtgacagatttcatcagtgaaGggttcttctgattcttggcaaaggttgagctggggttcctccccattcctgccatctctggtGggatctgtccagatagccGgtttccgacaaggttgagccaaagaaggctagtgcagtttccaatctccctagggatttctcctgaaagttgattcccagcaagcatcaacaagagaagcgatgtcAaattaccgatgcttggtggaatctcaCcggagaggctattgtatgacaagtccaatgcttggagattcacaagctgaccatatgatggagggattgtaccagagaagttattctccgcaagcatcagggccttgatgctacccatactagcgatctcagtaggcaacttgccattgaaattgttaaagctgaggtcaaggagggccaactttggcaaccctagtataccagaggagacaatgcctccactgtaattattctcttgtagcacaagatttgtcaggcttgtcaattttccaagAacttgttgcaCcTcccctccAaagttgttgtcactgatttccaaatatttcaagctGgtgcagttcatcagctcaagtggtatctcacgatcaaagtGgttgctcgtgagaacgagttcctcaagcccatggattgagccaattcctggtggtatagatccattgaagtgattgtcccatatcgacaggtatgtcaaaccggcgcaatttgcgattgaactcgggaaattgccatagaaatgattactggagagatctagtaactggagcttgcaccccgtggaaaaagttcttgaagagatgctcccagcgaagttgttctttccagccttgaactgtctaagccttgcaattccaTtccagacgttGccagtgaagctgttccagctgagatcaacatcctggagcttcaagcagttgttgaacaatccacttatacttcctgtcaggttattgctggacaagttgatagcacttaggttgcggcagattgctgggaagtttgcgctaatgccgccttcgaaccgattttgggacacatctagtgtctgcaggttggcgaggctGgagacgtcgagaataccactgatgagattgtaagataagtctaggtactggagatgcaggcaattcttgagatcatcatgcagctccccagtgatgctgtttgctgagaggtccaagtgtgtgagcccactgAggcgtgacaggttttggaaggctggaccagatatatttgagtttgaaagatcgagaaaattaaccctgccagaggcatcacaaccaacAccttgccaatggcatggtgaggtccctgactctggccaactgttatacccaccatggtttatcgggttctgaaactgtaaaaagttcttgagctcaagAagaacttccctatcactctgtccaagaattacctcagctgttgaagaaacacagcaactaaactcagaagatatcaagaacaagaagaagaaataactagataatcatgcttgaagtgttttagagttgagtgcaggaacataccaatgataagtgcatggaagaatgttttAaggatctgatgAaaaagggGcatggctcaaggacgagtgtagctagtttgcactgggaataGgattgctatggaatacccatttgcaagcttgtacagcttttatcgaccagaagaatagcactatcgacggcgtgtgtgtgtt

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CDS seq

atgCcccttttTcatcagatcctTaaaacattcttccatgcacttatcattgctgaggtaattcttggacagagtgatagggaagttctTcttgagctcaagaactttttacagtttcagaacccgataaaccatggtgggtataacagttggccagagtcagggacctcaccatgccattggcaaggTgttggttgtgatgcctctggcagggttaattttctcgatctttcaaactcaaatatatctggtccagccttccaaaacctgtcacgccTcagtgggctcacacacttggacctctcagcaaacagcatcactggggagctgcatgatgatctcaagaattgcctgcatctccagtacctagacttatcttacaatctcatcagtggtattctcgacgtctcCagcctcgccaacctgcagacactagatgtgtcccaaaatcggttcgaaggcggcattagcgcaaacttcccagcaatctgccgcaacctaagtgctatcaacttgtccagcaataacctgacaggaagtataagtggattgttcaacaactgcttgaagctccaggatgttgatctcagctggaacagcttcactggCaacgtctggaAtggaattgcaaggcttagacagttcaaggctggaaagaacaacttcgctgggagcatctcttcaagaactttttccacggggtgcaagctccagttactagatctctccagtaatcatttctatggcaatttcccgagttcaatcgcaaattgcgccggtttgacatacctgtcgatatgggacaatcacttcaatggatctataccaccaggaattggctcaatccatgggcttgaggaactcgttctcacgagcaacCactttgatcgtgagataccacttgagctgatgaactgcacCagcttgaaatatttggaaatcagtgacaacaacttTggaggggAgGtgcaacaagtTcttggaaaattgacaagcctgacaaatcttgtgctacaagagaataattacagtggaggcattgtctcctctggtatactagggttgccaaagttggccctccttgacctcagctttaacaatttcaatggcaagttgcctactgagatcgctagtatgggtagcatcaaggccctgatgcttgcggagaataacttctctggtacaatccctccatcatatggtcagcttgtgaatctccaagcattggacttgtcatacaatagcctctccgGtgagattccaccaagcatcggtaattTgacatcgcttctcttgttgatgcttgctgggaatcaactttcaggagaaatccctagggagattggaaactgcactagccttctttggctcaaccttgtcggaaacCggctatctggacagatccCaccagagatggcaggaatggggaggaaccccagctcaacctttgccaagaatcagaagaaccCttcactgatgaaatctgtcaccagcaaatgccttgctgtataccgttgggtcccatcaagttacccagagtttgactatgtccaatcgatgatgttctcacacaagaactgccgcaccatatggaacCgactgttgatggggtatgacatacttccagcatcttctccattacgaacagcattagggtatgttcagttgtcaggtaatctgctgtctgggcagataccctctgcaatcggtgccatgaagaacatcagcttgctccttctcgatggcaaccgcctctctgggcacctaccatcagagattggctctcttcaactggtttctttgaatgcatcgaacaattctatttcggGtgagattccgttcgagataggcaattTgggttccattgagagcctcgatttgtcatgcaataatttctctggctcactaccgtcgagccttgaaaagctctctaaactgagtcaattcaacgtgtcatacaatcctcttctcacgggcgaggttccaagcagtggtcagctctccactttcagtgagctatcttttcttggtgatccactactgtcatggcgttcagctgcaggtcatcctcgtcctaaaaatggcactgggttcttctttaatggcactgagtatcctacaaaagaagatatcagtgtgtcagtaattgcatttcttgtcttcttctctgttacctttgtaattagagaacttcagatcattatctttttgtacaacatTattatgtataaactcaccgaccataggacgcctttgcagtag

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Protein seq

MPLFHQILKTFFHALIIAEVILGQSDREVLLELKNFLQFQNPINHGGYNSWPESGTSPCHWQGVGCDASGRVNFLDLSNSNISGPAFQNLSRLSGLTHLDLSANSITGELHDDLKNCLHLQYLDLSYNLISGILDVSSLANLQTLDVSQNRFEGGISANFPAICRNLSAINLSSNNLTGSISGLFNNCLKLQDVDLSWNSFTGNVWNGIARLRQFKAGKNNFAGSISSRTFSTGCKLQLLDLSSNHFYGNFPSSIANCAGLTYLSIWDNHFNGSIPPGIGSIHGLEELVLTSNHFDREIPLELMNCTSLKYLEISDNNFGGEVQQVLGKLTSLTNLVLQENNYSGGIVSSGILGLPKLALLDLSFNNFNGKLPTEIASMGSIKALMLAENNFSGTIPPSYGQLVNLQALDLSYNSLSGEIPPSIGNLTSLLLLMLAGNQLSGEIPREIGNCTSLLWLNLVGNRLSGQIPPEMAGMGRNPSSTFAKNQKNPSLMKSVTSKCLAVYRWVPSSYPEFDYVQSMMFSHKNCRTIWNRLLMGYDILPASSPLRTALGYVQLSGNLLSGQIPSAIGAMKNISLLLLDGNRLSGHLPSEIGSLQLVSLNASNNSISGEIPFEIGNLGSIESLDLSCNNFSGSLPSSLEKLSKLSQFNVSYNPLLTGEVPSSGQLSTFSELSFLGDPLLSWRSAAGHPRPKNGTGFFFNGTEYPTKEDISVSVIAFLVFFSVTFVIRELQIIIFLYNIIMYKLTDHRTPLQ

Function Probable LRR receptor-like serine/threonine-protein kinase At1g74360 [UniProtKB/Swiss-Prot:C0LGJ1]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsLaMu_03g0020640 OsLaMu_03g0020640.01 Chr03 17127543 17130087 - NAM
CDS seq

atgCcccttttTcatcagatcctTaaaacattcttccatgcacttatcattgctgaggtaattcttggacagagtgatagggaagttctTcttgagctcaagaactttttacagtttcagaacccgataaaccatggtgggtataacagttggccagagtcagggacctcaccatgccattggcaaggTgttggttgtgatgcctctggcagggttaattttctcgatctttcaaactcaaatatatctggtccagccttccaaaacctgtcacgccTcagtgggctcacacacttggacctctcagcaaacagcatcactggggagctgcatgatgatctcaagaattgcctgcatctccagtacctagacttatcttacaatctcatcagtggtattctcgacgtctcCagcctcgccaacctgcagacactagatgtgtcccaaaatcggttcgaaggcggcattagcgcaaacttcccagcaatctgccgcaacctaagtgctatcaacttgtccagcaataacctgacaggaagtataagtggattgttcaacaactgcttgaagctccaggatgttgatctcagctggaacagcttcactggCaacgtctggaAtggaattgcaaggcttagacagttcaaggctggaaagaacaacttcgctgggagcatctcttcaagaactttttccacggggtgcaagctccagttactagatctctccagtaatcatttctatggcaatttcccgagttcaatcgcaaattgcgccggtttgacatacctgtcgatatgggacaatcacttcaatggatctataccaccaggaattggctcaatccatgggcttgaggaactcgttctcacgagcaacCactttgatcgtgagataccacttgagctgatgaactgcacCagcttgaaatatttggaaatcagtgacaacaacttTggaggggAgGtgcaacaagtTcttggaaaattgacaagcctgacaaatcttgtgctacaagagaataattacagtggaggcattgtctcctctggtatactagggttgccaaagttggccctccttgacctcagctttaacaatttcaatggcaagttgcctactgagatcgctagtatgggtagcatcaaggccctgatgcttgcggagaataacttctctggtacaatccctccatcatatggtcagcttgtgaatctccaagcattggacttgtcatacaatagcctctccgGtgagattccaccaagcatcggtaattTgacatcgcttctcttgttgatgcttgctgggaatcaactttcaggagaaatccctagggagattggaaactgcactagccttctttggctcaaccttgtcggaaacCggctatctggacagatccCaccagagatggcaggaatggggaggaaccccagctcaacctttgccaagaatcagaagaaccCttcactgatgaaatctgtcaccagcaaatgccttgctgtataccgttgggtcccatcaagttacccagagtttgactatgtccaatcgatgatgttctcacacaagaactgccgcaccatatggaacCgactgttgatggggtatgacatacttccagcatcttctccattacgaacagcattagggtatgttcagttgtcaggtaatctgctgtctgggcagataccctctgcaatcggtgccatgaagaacatcagcttgctccttctcgatggcaaccgcctctctgggcacctaccatcagagattggctctcttcaactggtttctttgaatgcatcgaacaattctatttcggGtgagattccgttcgagataggcaattTgggttccattgagagcctcgatttgtcatgcaataatttctctggctcactaccgtcgagccttgaaaagctctctaaactgagtcaattcaacgtgtcatacaatcctcttctcacgggcgaggttccaagcagtggtcagctctccactttcagtgagctatcttttcttggtgatccactactgtcatggcgttcagctgcaggtcatcctcgtcctaaaaatggcactgggttcttctttaatggcactgagtatcctacaaaagaagatatcagtgtgtcagtaattgcatttcttgtcttcttctctgttacctttgtaattagagaacttcagatcattatctttttgtacaacatTattatgtataaactcaccgaccataggacgcctttgcagtag

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Protein seq

MPLFHQILKTFFHALIIAEVILGQSDREVLLELKNFLQFQNPINHGGYNSWPESGTSPCHWQGVGCDASGRVNFLDLSNSNISGPAFQNLSRLSGLTHLDLSANSITGELHDDLKNCLHLQYLDLSYNLISGILDVSSLANLQTLDVSQNRFEGGISANFPAICRNLSAINLSSNNLTGSISGLFNNCLKLQDVDLSWNSFTGNVWNGIARLRQFKAGKNNFAGSISSRTFSTGCKLQLLDLSSNHFYGNFPSSIANCAGLTYLSIWDNHFNGSIPPGIGSIHGLEELVLTSNHFDREIPLELMNCTSLKYLEISDNNFGGEVQQVLGKLTSLTNLVLQENNYSGGIVSSGILGLPKLALLDLSFNNFNGKLPTEIASMGSIKALMLAENNFSGTIPPSYGQLVNLQALDLSYNSLSGEIPPSIGNLTSLLLLMLAGNQLSGEIPREIGNCTSLLWLNLVGNRLSGQIPPEMAGMGRNPSSTFAKNQKNPSLMKSVTSKCLAVYRWVPSSYPEFDYVQSMMFSHKNCRTIWNRLLMGYDILPASSPLRTALGYVQLSGNLLSGQIPSAIGAMKNISLLLLDGNRLSGHLPSEIGSLQLVSLNASNNSISGEIPFEIGNLGSIESLDLSCNNFSGSLPSSLEKLSKLSQFNVSYNPLLTGEVPSSGQLSTFSELSFLGDPLLSWRSAAGHPRPKNGTGFFFNGTEYPTKEDISVSVIAFLVFFSVTFVIRELQIIIFLYNIIMYKLTDHRTPLQ

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.266031 1.042752 None

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_03g0400800 RBH 0.0 0.0 0.0
Nipponbare | IRGSP 1.0 | MSU LOC_Os03g28270 RBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os03g0400800 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_03g0021060 RBH 0.313139 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_03g0020900 RBH 0.119150 0.035115 0.072934
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_03g0020960 RBH 0.356149 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_03g0020950 RBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_03g0020790 RBH 1.452051 0.000000 0.000000
Minghui 63 | MH63RS3 | HZAU OsMH63_03G0269200 RBH 2.0696815 0.291296 0.5328865
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_03g0020530 RBH 0.169115 0.000000 0.028972
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_03G0271000 RBH 0.295042 0.2473005 0.5116215
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_03g0020780 RBH 0.104945 0.051422 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_03g0020770 RBH 0.299384 3.693259 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_03g0020870 RBH 2.990772 6.671483 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_03g0020760 RBH 0.424119 0.101027 0.097423
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_07g0023170 SBH 0.037987 4.032367 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_03G020570 RBH 0.113447 0.214526 0.171174
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_03g0020470 RBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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