Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0036740 | OGI:02096170 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:35045532-35047506 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | tcaaatagcattgaggtagaccacgaggaacttagacagccggtcgtattccttctccctctccgccaccatcgccctcgactcgctgttcgcagcagcggcctccctcgccggctgcttcttggtgcttgaatccttctttttcttcttctttataagtaacaataggacgagtaaatacttgacaagaaaaaagttgtcgcaagggcggtggaactgaaatatagtctatatcggctgtattttgtggtgattagtataaatcagcattaatgaatggtgatgagatgtaagttctgcatggaaactaaagccaaaccaagctcaaagcaccgacagaagcaaaatatataatttgtggatatcatgatgacggaataaaacaaccaatttgagataattattattatttcaagtactccctccagccaaatttatttggcattgtttctaacgccgaataaatttgactagagtctagaggtagtacatcctaacaccaaaaatctatcaagatgaccctttgttttccaagaacttctaaactaccaataccaagatgccacaagactacatagttttatgttcgagaaaaacgactacacaattttgccctgttaaaagtaaacaaacaagaattcatatgaaggtaaatagaactttggtggcactccctgactccaataaagaacataaacatgaatataataaataagcaaaagttggttcccaaatagttgcaaagaaatgtgaaaagcaagcaataagattcaGgggaaatcaaaggatagcaatccttacagttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatcctagcatagatgacggcaatgcaccagggggcctttggaacctggcaacagataaatcatcaatcaaaacatctttcatgttagcctgcccaattaaaagcaatggagatgagttgtgcgtgctgtttttctcctatttgcagtgtattgatgtgctaattgttactagaaggggcagacaaacaaaaacaacatcaagatactgtgaattcaaccagaccaagggattcaagcattctgagtgatccatactagaacatacaaagcatcaacaaaatcttagtaacctgagcatatcgatatgtggagatgctcaaaatactacacatgcacaatattttgagaatcaactattctaaccaggaaaattggcgtatataacaagaagtttcagaaggaatttgcacactgtcagcagaatacaactgatgaccaccaacaataacatcactgatataatacgcacataggaaaagagttgcagacttgcagtaaatgcaaagagctactaccagatttacaactagacacacacacacacacacaaaaaaaaaaaacgagctaactgcaagggcaatcttaacaaacacagggaggatataaaccacatcgaattcaaatatgcatatctcgtgcccataataagccagcccacttaagtttacggacctaacagttccaacaagacatgtaatactgcctgctcagatggaactactagtgcctatctatcaacttggacagatggtggtattgcagcggaaattacatggggataggacagtgaattacttggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggcttccgcgccgaacctcttcttgtccgcccagaacttggcctcctgcgcgcgcggcggggattcagcgtgttagctagggtttcgagggcgagagggggggagaagaagaagaagaagaagaagaagaagaagaagaagaccttgtggacgctggcctggagcgggtgcggcggcgcgaggtcccccttgacgctgtcgttgacgccgaagcggacgacgtcgtggttcccgccgatctccttcttcaccacgCcgccgctcgccat
More
|
||||||||||
| CDS seq | atggcgagcggcgGcgtggtgaagaaggagatcggcgggaaccacgacgtcgtccgcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggccagcgtccacaaggtcttcttcttcttcttcttcttcttcttcttcttcttctccccccctctcgccctcgaaaccctagctaacacgctgaatccccgccgcgcgcgcaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaaggccccctgaagaagaaaaagaaggattcaagcaccaagaagcagccggcgagggaggccgctgctgcgaacagcgagtcgagggcgatggtggcggagagggagaaggaatacgaccggctgtctaagttcctcgtggtctacctcaatgctatttga
More
|
||||||||||
| Protein seq | MASGGVVKKEIGGNHDVVRFGVNDSVKGDLAPPHPLQASVHKVFFFFFFFFFFFFSPPLALETLANTLNPRRARRRPSSGRTRRGSARKPSTDPPSTSARILMPKSSPSSKGPLKKKKKDSSTKKQPAREAAAANSESRAMVAEREKEYDRLSKFLVVYLNAI |
||||||||||
| Function | Cyclin-B1-2 [UniProtKB/Swiss-Prot:Q0DWQ7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0036740 | OsLaMu_02g0036740.01 | Chr02 | 35045532 | 35047506 | - | NAM | ||
| CDS seq | atggcgagcggcgGcgtggtgaagaaggagatcggcgggaaccacgacgtcgtccgcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggccagcgtccacaaggtcttcttcttcttcttcttcttcttcttcttcttcttctccccccctctcgccctcgaaaccctagctaacacgctgaatccccgccgcgcgcgcaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagttccaaaggccccctgaagaagaaaaagaaggattcaagcaccaagaagcagccggcgagggaggccgctgctgcgaacagcgagtcgagggcgatggtggcggagagggagaaggaatacgaccggctgtctaagttcctcgtggtctacctcaatgctatttga
More
|
|||||||
| Protein seq | MASGGVVKKEIGGNHDVVRFGVNDSVKGDLAPPHPLQASVHKVFFFFFFFFFFFFSPPLALETLANTLNPRRARRRPSSGRTRRGSARKPSTDPPSTSARILMPKSSPSSKGPLKKKKKDSSTKKQPAREAAAANSESRAMVAEREKEYDRLSKFLVVYLNAI |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 0.000000 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0801200 | SBH | 2.529677 | 4.720603 | 41.783760 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g55640 | SBH | 2.930757 | 3.455950 | 7.744719 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0801200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0037260 | SBH | 2.519331 | 93.262131 | 19.361649 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0037380 | RBH | 0.938171 | 1.059204 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0037330 | RBH | 0.000000 | 0.000000 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0036870 | RBH | 0.000000 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0037050 | SBH | 0.000000 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0558400 | SBH | 22.6976015 | 28.2038105 | 43.192316 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0036790 | SBH | 0.625067 | 7.993972 | 4.020517 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0588700 | SBH | 66.4122735 | 52.704241 | 129.7355385 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0037090 | RBH | 0.442721 | 0.540015 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0036970 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0037090 | SBH | 2.903602 | 40.377811 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0037090 | SBH | 3.605858 | 6.939103 | 4.809688 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0036800 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G037310 | RBH | 3.154130 | 3.857224 | 15.060705 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0037200 | SBH | 4.762067 | 32.115070 | 26.864668 |
