Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsNaBo_02g0037200 | OGI:02096170 | 16/16 | NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | Chr02:36047571-36059100 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ccatttccgagtaatatcaggtagtcaaaatctgcaggctcaaatattactttattcaaaTtttTATTACTATATAATAAGTAGTACATAATACATACTCACTGCAGTGAGTATATATTCACTAGGACCCCTTATTACAATTATTTATGCGGAGAGGGGCCAGACCGCCAGAGGAAGCGAAGCAGCGGGCGCCTTATTTGGCGCATGTGGCTAATGCCTCTTTCAGGCATCCAGGCGCCGGAGCCCAGCCACACTGGTTTTCGACGTGGTTGACGCACTCTTTAATGTGACCTGGGAAGTGACTGGCTATGTAAATTAATATTGCTTTGCTCAGATGGCCAAGGATAAATTTCTCTTCATCGTTGGCGCGATCACCTAAACAAAAGAAGAAAGAAAAAGCATATATGCACAAGTAAGGACAGTAtatatatatatatgcagatgaaaagatcgatactacagtactacttaagagatgacaagatgatgtacctgtaccaccagtcccacgggcgctgcctccagcggcagcggcggccgctacctccgtcattaggagaatgacgataaaaacagcatacgcgaccttctttgagtccattgtctgactcttgttagtggctggcagtaagtacagtacgtgtgcgctcgattttgatccctcccctgcctgctgggtgcccatataaatactactactccgatccacttgaacatgccccattaattaactagtagtacaactccacatgcccgctaggaatcagtatcttctggagtagtagtagctagctagctcccgtgtagcattaactttctgccttcaatcattttacatcattgaaggagagtttcattattttggtataagagcaagttaaatctgtacgcagttggtgcaaagagagtgacaacatgttgggtaaatttgtttaaacagttggaaattagccaggtaaataatatataacaggaataaaatttaagattgctggtgtcaatagataacatttgatgtccagaactatgtaataaattcaacattttctaaatagcctgtcattttcgttggtcaggaaaacatcttgatttgttgaccactaatttcaatataaatatattcgtaaaatagatgaaactacaatggtaccatcgaagaaatatattcaaaaatgatattaatgctcgacattgtgtaagtttcttttcctctcattagatggaggtacgaggtatatgcctatttagccaagcttccttataattttgttcaaatttgaactggtccccaatctttttttttttgaaagaaatcatccttttcaaattccaaaggctccagtactgacctcagccattgcctatctctattgtcatgaatgccacgctgttcaccaccactgtcctgcaaaggatagacaaaattcacaaaattagcgcatttctttcataaatagcaaaagtagaccaagaattcaacactactacaaaaacagtgtcatccaccacccatcaagttaagatctaaaccattagttgtttccaccaacatttctattattgtaataactattacaagaccataagaaaggtttctcatgtttaacgcagattaagcagtctgatgtgttataccttcattcctatcaacaaagacaacattgacacataatttgctttggcgccagtacctaattaagtaggatgcgattttttttttcagtgtaatgtttatcgtctgcaattggtgatatatgggagctacaaacttgattccgagttagttatgaaggcatcattggcaaatcctaccatcgcaggtgcagtgcttttgacctgattcacaatcctgatatcgcatctagaaggcaaatcttcggactaaaaaaaagttgagccattataaatagaaacgaatggtaagtaaattcttgtttgcaatgttacatgtttgttaaaagtatcactgatccaaatacagtttaaatgtatacctgctgtcctcgcaacttaaatgcatttaagcaactacagcatcctttgtttgtgaatcatcgctccacaattattacaccagtatatcacaagtattcttttcatcctgccgtcagtcaatacgaggtcaatgtttttgaagtaccttttttaccaatcatctttgatcagaactgacctgaattgaaattttgaatgcatccatacaaccgaattggctagggcatgatagcagttagctgtttgaatatgatctggtgcttaaatttatgatctagtgcctaaaatcttaattgcagcctttaatgtgtctaatttattcaaaactgaacatgtgacacataatagaccattatattccaaatgcagttgattctcttactgattcatgtcacaaatttcaaatccatactattctagagatggagtttccatcaagaaggttatggttcttgccacgccaatcttatgaaaacaaatatatagtactaacaataaaatattcggcaaacattttttccgaatgtcagccatttacaaaattaagcatgatctcttcgtactgatttttttgtggctcaaatttgttggtattatagattaaaacaaaaatctaggtttacagaaccaatcttagcatggggttatgatcatgtttcttactatgagtggccggagtggttcatggtcttctgagttttccctgatgaccaaggatgatagcaccacgttgaagacgataggatcttatttattcttttgccttgaatagctcctgcacagcatacaatgagaatcatcgttttgtaaacttaatcagagtaagaacagcaataccaaagtgatatttgcaatgcagatgattctcaaagttcaattctcaatctccacttaaagcaacataaaaatgtactaccaaagtctatcacatcacaagttcccaaccaaaggagaaatgggaattataatacatgaataaaatatagccccaaaatcagaaagacagttttttttttttttttttttttgaaattccaatagctcggcattcttgaaaacactataaatcagagcatggtcatttaatgcttggactatagcaaaaaatagaaatattcagagtaaatgactattaagcaaagaatgttatgatttctaatataacaaagatgggaatatgtagagaactttcgagtttcgattttcatcaagacctcaaccaaactgctacaaaatatgtggtactaactactaaaataggagaatccttcattgataaaaaaaaaatctaaaaagatattgtaggtagaagcagaattacagcaaccatgtgcttgatcttcctcacaagcaactcacagtgcttcatccacaacatttcaaagatagtagcataccactaaatagtgcctctttaatcataccaacaaatgtgatattattaccaggatcccacaacgtgatgacactgtcagctgcaaccaaaaaacagatccctcacttgaaaaagttgcgaatgtcataggtttattcctgcaattttttacttttctatgtcatcatttacatcatttgccagaaatggcaaatcattttatggcagcctaagcacgtggtatacaagtgccaacaatatatatggtatggcatccttgaccattaaatattagaggtattgtttagaggaaattaaataatcaaatcaactcacttgtatgaaccaaccaattgacatccccaaccagattgttttttttttcatcacttggttgcgaaagcatactttggacccaaacctacagattaattggtcacaagagaagcaaatgaagacctcacggcttgagccgtgttttttccagggcgggaagcaacaatagaaatagcaacattgctgtgtgaaagaactaaaccaaatgatagtaaaaacacaagaaatatattccatttgaccttataaacatgtgccaacctatgcggcaggttgaagagtacatatatagtaacaatttgagaggtagagacaaaacaaagttagaacatctaaaataaaagtccatatgcacctttcattagaggcttagagtattgaaaaaaaaaatcccaatctatcagctttcaggagatgcgatagcctgcacaacccaaagcatgacggtcaaaagacgagacaatccaatactcaggttgccttgaccaacacaagatattatttaagttcatacccttgcaacaggaagaggaacatcgatgtaccgtggccattcgccttgaccaacacaagatattatttaagttcatacccttgcaataggaagaggaacatcgatgtaccgtggccattcacatattgtctcatacatcagctcagcctgtaacatccagaacatttttatataaaaaaactccgaccaaccaacttgaagattcgttcattgctgcataacaaaatgttgtgcatgataattaccagatcatgaacagtataaatctctggtccaccaagtccgtagctctttcccatgctggtgccatcatccttgagggagttgacaatagcagcagcaacatccacaacataaacaggctgaatcctgcaaaaaccaaaaggttgcattcatgtaatctcacctgctgtggaagtttaagatgcaggtccccattgattgcctatgactgattaaaagccgtaatggcttattagtgataaaaaaagtaatttatgagtaaaacttttacatgtgtccttagtggcttaaataaaagctaatgctgaaaaagaaactacgttgtaaaagcatcaaaaccaacttcaaaatcaagttttaaaattcaaatcaagccatagggcaaatgatgaggcctgtattctctgatcaattaatgttctagactaaattttgagtcaagggattacgacaacagccaacaggaaagctcaattactttgtagaccgggaatcaatttttggcaaactgtacccatctgttcaaaatccgatcttctgtgccaatcatagttgcaggcctcataattgtagcctgttgatccatgcaacacagaagtttggttaaagtaaccgccaacataaatgggacatgtttgcttctaactttgggtagtatagaaacagaagttcagtattgcctaatgcagatgatcacctcaggaaattccttcaacacagattcttccccagcagccttggccctcagcattctagaagaagaggccgatgctcctaggcaagaaacctggataaatctcatgaaacccccatgctcctttgaaatctgtgcatagtccataacacagttaatagccagccacaaaagaagtcttgatgggaattaacacaaaagaagtgttaatagcccgctgctctaatctctcctcttttatctgctcttatctctcctcttttatcttcctcaaatatgtttatagctggcttatagtctgctactgtatctgctctaagaagagtgaaggtgtcatgtggggcgacatgtgcagcaagcagcaaagatggaagccaggcacatgcgcagcaagcagcaacaacacaatcaaggattagagatttggaaagtttttcaacaaggaaagtcttaattagggagaaataatgattatttccttgtactagggaggtcaagtgcccatataaactactagatgtggttgcgcggcgtgccgtgagagttgtcacaaatttgaataaattgatttataacttttttttacattaggtttgtactgttatcgataaatatttaagtttttctttaagttaagaattgttgctttacttgaaagatggtaatttttcatagcttttttttttgaaaatatgtataataagtatttgtttgcacgttttccaatactgaatacgcttctttatttacctttatttttactgaccaatcaatgagttgttgccggctctgtgataatcttttgaacttgagggcctcagcattctgttaggacctagcactgagtgtatagaactcgtatatgaatagttgtaaaaatgtaattataagttttaaatattgcattgataatacatagaatccaaggcgcattcctagacggatatagtattttatagacatagttaacaaatctaaaagttgtagttttgataagtagtggatgcagagtatgtgcaagaaggTgggggttaataaagatgaggtagtttttttttccacctgtagtaattgtggctatgaagtgtttgtttgcaaacaatacagtgggctgttgtggtgctaacatctttttttaattagtaattgtatgcgaatgtggaaagtgtagtgtatccgaacattattttgtaggatgtaactttactaagaaaacctacatcctaagtttcatgcatactacacacatcatatataaacttcccgtgggtctatctggcttgaatttaactcgataaattttatcaaaaggaaaataatctgatctatcttgattatttgaataaggtatgtgctctctgcatttacagatagacccattaaagaacaaggtttttttgaaaatgaactatggaaaatgcacggcctgactgaatcatttacactaaatcataagaactgtgatccgttcaatgcagaacttcctttctcaattagaatttagctatgttcttgacaaactgcaatataaattatccgaaggtacacaactggtgtttattatattaagagcaaatatgcacatctgccatggcattacttatggagtcttgaatggactctagtgttactgatcccagggcttataatcgtcacagtaggatacttcagcagatgagctgaccttctcttggcaatctgctccacagttgtcaaagaaccaatcaaaatgtaatttcaaccaagacagagagaaaggagagagaggaaatgacgggtgataagctcagggtgattcttcagagtgctagtagcagccagagatgaagtacaaagcagtagaacatctctttctgttgattattcagagcagcagggtaaaaagtgaaactggattaggacacattcctacttcagaaaagataggtgaagagaatatttgctgtacattcttccgtgataatttcagtttgaaagtggatggaggcacaatttaacctttgcagcatacaactcagaatagcacagtacgatgcttcactggaatgattaatttatattttgaactcatgaaacagtaaaaattgaagtactccaacacatttaaccagtctgaaccaaaatagtacacagagtagaaatcaggaaccatggtttgcagagcaataaagcatgaaaattcagcaaatatactgaatatttcaacattggcacaataacaactaacttcaaggagacaaggactcaaggaataatccctgcaagtatgttcaactgataggacatatacatttctggaatataaatgaactaaatttgtttggcaaaatgaatttgtcagtaacattttagagcactgctgagtgggaaaagcattcagctgatcactctgactaattatgtgggcaaaaagcaatttgagaagatggtgacggctaaacttattatcttaattcggattggtgtttttttagctatcataggtggttttgtttagaggtgtggacagaaggtagcaaaatttctttgggaggcggacttaacaaagtgtagtctgttgatttacgtgaaaggatttatcaagagttaatattgtgacaaaccaaatctgggttcgtgataattaagacagttaatggagcaaatcattttagaatgattcgttgtcagattgtaaatcatgatatgtgtcactaaaataatctagactcacaacatgtaagtatgtgactgcactaccacacatccttgcacacagagtgagaattaattagtagagtggtagagcatatataattaaaatgacaggcttgagaaaaggtggtgcaaatcaacagggaaaaaattgaattaggagcaaacctgacttctttatcaaatccaaaatgagccccaaagtaaaatgccacacagtatccatgaatcactacggacagctatcagggacaaccaatctttccaagaacgtgcaaagaatagattggaaaatcacaggtatgcctgaaggatcaagtaacttttcatctcgttgtttgccacaagatacatcttgttcaccaaatgagttgcatataaaataattgcatcattgaattttgctcagtggtacgaattatctgcaatgattaagtgaagaagataactgctcagagtttccctggtacaattaaaaaatacgaacaccagtatgaaatacaaagctgctggattgttgcaaaaataacatgaataataacaaaacaggaaaaatggaaaacaaattagcgtatgtaggaattgcatagttagcaattaaaaaacagatttctagtgtttgtccataccgtgaaagatattatctccaattgttcaacaataaagggaactaaaccgataggggattatgtaatccaaataaacctgtgatgaaaccgaaggagctagttcagcgaaatgtagtagttaatctgctagtccaaatattgttgtatcggaaagaaggagcagattcggatactgaaatctgttgaaaattgataactgggccacaaagaaatctgcaataatcacaataatgattggaaagagaattagctcgattggggacaaagtgacgaacctgcactaggaataatggagatctagtggaacaacgtcctagttagccgagaggatggatccagcaatttcttcatatatagaaatgacgaggattgggcctggctgcatagacagcagaggcatatgccaccagcccgtactgcatcagtgccaattcagcgaagaagaaggccatgtgctccatcagcattcaccaaaagaaatcttgagtacacgcttaaacttgtcgcttagcaatgaaatataatctggtggtaaacagaaacaaacaaaagccatggctctttacctccttgtcacttttgttatctgcagacgcagatagcatcataatgaagacatatggtgtaggaatggtgagattccactgaagcttattcagaatccccttctccattgcaagaatctgttccctagtgtatgcactatctgatatgaagatgaagtcgttcacctgcaaatacatacacagagatccaatcagaacaagtccctgctagaaatggacagtgcagagcaaaggggataaaatgttgctacctctggggcccaaatctcctcgtacttgcaatctatcagcatggcagaaacggcgaccagttgcagctccctccgctgcacttgctgcatcgagagagagatttgtggcgcacttgtcgcttgtgtgtaggcggtgccgccgagcagcaattccagagctccacgccccaggacccagccatcctcggaggccgcagcgtctcaaatagcattgaggtagaccacgaggaacttagacagccggtcgtattccttctccctctccgccaccatcgccctcgactcgctgttcgcagcagcggcctccctcgccggctgcttcttggtgcttgaatccttctttttcttcttctttataagtaacaataggacgagtaaatacttgacaagaaaaaagttgtcgcaagggcggtggaactgaaatatagtctatatcggctgtattttgtggtgattagtataaatcagcattaatgaatggtgatgagatgtaagttctgcatggaaactaaagccaaaccaagctcaaagcaccgacagaagcaaaatatataatttgtggatatcatgatgacggaataaaacaaccaatttgagataattattattatttcaagtactccctccagccaaatttatttggcattgtttctaacgccgaataaatttgactagagtctagaggtagtacatcctaacaccaaaaatctatcaagatgaccctttgttttccaagaacttctaaactaccaataccaagatgccacaagactacatagttttatgttcgagaaaaacgactacacaattttgccctgttaaaagtaaacaaacaagaattcatatgaaggtaaatagaactttggtggcactccctgactccaataaagaacataaacatgaatataataaataagcaaaagttggttcccaaatagttgcaaagAaatgtgaaaagcaagcaataagattcaggggaaatcaaaggacagcaatccttacagttaagataatcttcaaacccaaaatcatctaaggaaccagtcagtgcctcatatcctagcatagatgacggcaatgcaccagggggcctttggaacctggcaacagataaatcatcaatcaaaacatctttcatgttagcctgcccaattaaaagcaatggagatgagttgtgcgtgctgtttttctcctatttgcagtgtattgatgtgctaattgttactagaaggggcagacaaacaaaaacaacatcaagatactgtgaattcaaccagaccaagggattcaagcattctgagtgatccatactagaacatacaaagcatcaacaaaatcttagtaacctgagcatatcgatatgtggagatgctcaaaatactacacatgcacaatattttgagaatcaactattctaaccaggaaaattggcgtatataacaagaagtttcagaaggaatttgcacactgtcagcagaatacaactgatgaccaccaacaataacatcactgatataatacgcacataggaaaagagttgcagacttgcagtaaatgcaaagagctactaccagatttacaactagacacacacacacacaaaaaaaaaaaacgagctaactgcaagggcaatcttaacaaacacagggaggatataaaccacatcgaattcaaatatgcatatctcgtgcccataataagccagcccacttaagtttacggacctaacagttccaacaagacatgtaatactgcctgctcagatggaactactagtgcctatctatcaacttggacagatggtggtattgcagcggaaattacatggggataggacagtgaattacttggagaggatttgggcatcaagatccttgcggatgttgaaggcggatccgtagatggcttccgcgccgaacctcttcttgtccgcccagaacttggcctcctgcgcgcgcggcggggattcagcgtgttagctagggtttcgagggcgagagggggggagAagaagaagaagaagaagaagaagaagaagaagaccttgtggacgctggcctggagcgggtgcggcggcgcgaggtcccccttgacgctgtcgttgacgccgaagcggacgacgtcgtggttcccgccgatctccttcttcaccacgccgccgctcgccatcgtcgcctgcgaagctctctctctctctctctcttcactcatcactcattctttcattactcat
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| CDS seq | atggcgagcggcggcgtggtgaagaaggagatcggcgggaaccacgacgtcgtccgcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggccagcgtccacaaggtcttcttcttcttcttcttcttcttcttcttctTctccccccctctcgccctcgaaaccctagctaacacgctgaatccccgccgcgcgcgcaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagtaattcactgtcctatccccatgctaacatgaaagatgttttgattgatgatttatctgttgccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttagatgattttgggtttgaagattatcttaactacgctgcggcctccgaggatggctgggtcctggggcgtggagctctggaattgctgctcggcggcaccgcctacacacaagcgacaagtgcgccacaaatctctctctcgatgcagcaagtgcagcggagggagctgcaactggtcgccgtttctgccatgctgatagattgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttcatatcagatagtgcatacactagggaacagattcttgcaatggagaaggggattctgaataagcttcagtggaatctcaccattcctacaccatatgtcttcattatgatgctatctgcgtctgcagataacaaaagtgacaaggagaatgctgaggccctcaagttcaaaagattatcacagagccggcaacaactcattgattggtcagtaaaaataaagatttcaaaggagcatgggggtttcatgagatttatccaggtttcttgcctaggagcatcggcctcttcttctagaatgctgagggccaaggctgctggggaagaatctgtgttgaaggaatttcctgaggctacaattatgaggcctgcaactatgattggcacagaagatcggattttgaacagatgggtacagattcagcctgtttatgttgtggatgttgctgctgctattgtcaactccctcaaggatgatggcaccagcatgggaaagagctacggacttggtggaccagagatttatactgttcatgatctggctgagctgatgtatgagacaatatgcgaatggccacggtacatcgatgttcctcttcctgttgcaagggctatcgcatctcctgaaagctga
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| Protein seq | MASGGVVKKEIGGNHDVVRFGVNDSVKGDLAPPHPLQASVHKVFFFFFFFFFFFSPPLALETLANTLNPRRARRRPSSGRTRRGSARKPSTDPPSTSARILMPKSSPSNSLSYPHANMKDVLIDDLSVARFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASEDGWVLGRGALELLLGGTAYTQATSAPQISLSMQQVQRRELQLVAVSAMLIDCKYEEIWAPEVNDFIFISDSAYTREQILAMEKGILNKLQWNLTIPTPYVFIMMLSASADNKSDKENAEALKFKRLSQSRQQLIDWSVKIKISKEHGGFMRFIQVSCLGASASSSRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDRILNRWVQIQPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAELMYETICEWPRYIDVPLPVARAIASPES |
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| Function | Cyclin-B1-2 [UniProtKB/Swiss-Prot:Q0DWQ7] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0037200 | OsNaBo_02g0037200.06 | Chr02 | 36047571 | 36049125 | - | NAM | ||
| CDS seq | atggggcatgttcaagtggatcggagtagtagtatttatatgggcacccagcaggcaggggagggatcaaaatcgagcgcacacgtactgtacttactgccagccactaacaagagtcagacaatggactcaaagaaggtcgcgtatgctgtttttatcgtcattctcctaatgacggaggtagcggccgccgctgccgctggaggcagcgcccgtgggactggtggtacagGTGATCGCGCCAACGATGAAGAGAAATTTATCCTTGGCCATCTGAGCAAAGCAATATTAATTTACATAGCCAGTCACTTCCCAGGTCACATTAAAGAGTGCGTCAACCACGTCGAAAACCAGTGTGGCTGGGCTCCGGCGCCTGGATGCCTGAAAGAGGCATTAGCCACATGCGCCAAATAA
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| Protein seq | MGHVQVDRSSSIYMGTQQAGEGSKSSAHVLYLLPATNKSQTMDSKKVAYAVFIVILLMTEVAAAAAAGGSARGTGGTGDRANDEEKFILGHLSKAILIYIASHFPGHIKECVNHVENQCGWAPAPGCLKEALATCAK |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0037200 | OsNaBo_02g0037200.04 | Chr02 | 36048278 | 36059036 | - | NAM | ||
| CDS seq | atggcgagcggcggcgtggtgaagaaggagatcggcgggaaccacgacgtcgtccgcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggccagcgtccacaaggtcttcttcttcttcttcttcttcttcttcttctTctccccccctctcgccctcgaaaccctagctaacacgctgaatccccgccgcgcgcgcaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagtaattcactgtcctatccccatgctaacatgaaagatgttttgattgatgatttatctgttgccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttagatgattttgggtttgaagattatcttaactacgctgcggcctccgaggatggctgggtcctggggcgtggagctctggaattgctgctcggcggcaccgcctacacacaagcgacaagtgcgccacaaatctctctctcgatgcagcaagtgcagcggagggagctgcaactggtcgccgtttctgccatgctgatagattgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttcatatcagatagtgcatacactagggaacagattcttgcaatggagaaggggattctgaataagcttcagtggaatctcaccattcctacaccatatgtcttcattatgatgctatctgcgtctgcagataacaaaagtgacaaggagaatgctgaggccctcaagttcaaaagattatcacagagccggcaacaactcattgattggtcagtaaaaataaagatttcaaaggagcatgggggtttcatgagatttatccaggtttcttgcctaggagcatcggcctcttcttctagaatgctgagggccaaggctgctggggaagaatctgtgttgaaggaatttcctgaggctacaattatgaggcctgcaactatgattggcacagaagatcggattttgaacagatgggtacagattcagcctgtttatgttgtggatgttgctgctgctattgtcaactccctcaaggatgatggcaccagcatgggaaagagctacggacttggtggaccagagatttatactgttcatgatctggctgagctgatgtatgagacaatatgcgaatggccacggtacatcgatgttcctcttcctgttgcaagggctatcgcatctcctgaaagctga
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| Protein seq | MASGGVVKKEIGGNHDVVRFGVNDSVKGDLAPPHPLQASVHKVFFFFFFFFFFFSPPLALETLANTLNPRRARRRPSSGRTRRGSARKPSTDPPSTSARILMPKSSPSNSLSYPHANMKDVLIDDLSVARFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASEDGWVLGRGALELLLGGTAYTQATSAPQISLSMQQVQRRELQLVAVSAMLIDCKYEEIWAPEVNDFIFISDSAYTREQILAMEKGILNKLQWNLTIPTPYVFIMMLSASADNKSDKENAEALKFKRLSQSRQQLIDWSVKIKISKEHGGFMRFIQVSCLGASASSSRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDRILNRWVQIQPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAELMYETICEWPRYIDVPLPVARAIASPES
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0037200 | OsNaBo_02g0037200.01 | Chr02 | 36047571 | 36059100 | - | NAM | ||
| CDS seq | atggggcatgttcaagtggatcggagtagtagtatttatatgggcacccagcaggcaggggagggatcaaaatcgagcgcacacgtactgtacttactgccagccactaacaagagtcagacaatggactcaaagaaggtcgcgtatgctgtttttatcgtcattctcctaatgacggaggtagcggccgccgctgccgctggaggcagcgcccgtgggactggtggtacagGTGATCGCGCCAACGATGAAGAGAAATTTATCCTTGGCCATCTGAGCAAAGCAATATTAATTTACATAGCCAGTCACTTCCCAGGTCACATTAAAGAGTGCGTCAACCACGTCGAAAACCAGTGTGGCTGGGCTCCGGCGCCTGGATGCCTGAAAGAGGCATTAGCCACATGCGCCAAATAA
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| Protein seq | MGHVQVDRSSSIYMGTQQAGEGSKSSAHVLYLLPATNKSQTMDSKKVAYAVFIVILLMTEVAAAAAAGGSARGTGGTGDRANDEEKFILGHLSKAILIYIASHFPGHIKECVNHVENQCGWAPAPGCLKEALATCAK |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0037200 | OsNaBo_02g0037200.02 | Chr02 | 36047571 | 36059087 | - | NAM | ||
| CDS seq | atggggcatgttcaagtggatcggagtagtagtatttatatgggcacccagcaggcaggggagggatcaaaatcgagcgcacacgtactgtacttactgccagccactaacaagagtcagacaatggactcaaagaaggtcgcgtatgctgtttttatcgtcattctcctaatgacggaggtagcggccgccgctgccgctggaggcagcgcccgtgggactggtggtacagGTGATCGCGCCAACGATGAAGAGAAATTTATCCTTGGCCATCTGAGCAAAGCAATATTAATTTACATAGCCAGTCACTTCCCAGGTCACATTAAAGAGTGCGTCAACCACGTCGAAAACCAGTGTGGCTGGGCTCCGGCGCCTGGATGCCTGAAAGAGGCATTAGCCACATGCGCCAAATAA
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| Protein seq | MGHVQVDRSSSIYMGTQQAGEGSKSSAHVLYLLPATNKSQTMDSKKVAYAVFIVILLMTEVAAAAAAGGSARGTGGTGDRANDEEKFILGHLSKAILIYIASHFPGHIKECVNHVENQCGWAPAPGCLKEALATCAK |
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0037200 | OsNaBo_02g0037200.05 | Chr02 | 36056165 | 36059036 | - | NAM | ||
| CDS seq | atggcgagcggcggcgtggtgaagaaggagatcggcgggaaccacgacgtcgtccgcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggccagcgtccacaaggtcttcttcttcttcttcttcttcttcttcttctTctccccccctctcgccctcgaaaccctagctaacacgctgaatccccgccgcgcgcgcaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagtaattcactgtcctatccccatgctaacatgaaagatgttttgattgatgatttatctgttgccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttagatgattttgggtttgaagattatcttaactacgctgcggcctccgaggatggctgggtcctggggcgtggagctctggaattgctgctcggcggcaccgcctacacacaagcgacaagtgcgccacaaatctctctctcgatgcagcaagtgcagcggagggagctgcaactggtcgccgtttctgccatgctgatagattgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttcatatcagatagtgcatacactagggaacagattcttgcaatggagaaggggattctgaataagcttcagtggaatctcaccattcctacaccatatgtcttcattatgatgctatctgcgtctgcagataacaaaagtgacaaggaggtaaagagccatggcttttgtttgtttctgtttaccaccagattatatttcattgctaagcgacaagtttaa
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| Protein seq | MASGGVVKKEIGGNHDVVRFGVNDSVKGDLAPPHPLQASVHKVFFFFFFFFFFFSPPLALETLANTLNPRRARRRPSSGRTRRGSARKPSTDPPSTSARILMPKSSPSNSLSYPHANMKDVLIDDLSVARFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASEDGWVLGRGALELLLGGTAYTQATSAPQISLSMQQVQRRELQLVAVSAMLIDCKYEEIWAPEVNDFIFISDSAYTREQILAMEKGILNKLQWNLTIPTPYVFIMMLSASADNKSDKEVKSHGFCLFLFTTRLYFIAKRQV
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsNaBo_02g0037200 | OsNaBo_02g0037200.03 | Chr02 | 36047571 | 36059036 | - | NAM | ||
| CDS seq | atggcgagcggcggcgtggtgaagaaggagatcggcgggaaccacgacgtcgtccgcttcggcgtcaacgacagcgtcaagggggacctcgcgccgccgcacccgctccaggccagcgtccacaaggtcttcttcttcttcttcttcttcttcttcttctTctccccccctctcgccctcgaaaccctagctaacacgctgaatccccgccgcgcgcgcaggaggccaagttctgggcggacaagaagaggttcggcgcggaagccatctacggatccgccttcaacatccgcaaggatcttgatgcccaaatcctctccaagtaattcactgtcctatccccatgctaacatgaaagatgttttgattgatgatttatctgttgccaggttccaaaggccccctggtgcattgccgtcatctatgctaggatatgaggcactgactggttccttagatgattttgggtttgaagattatcttaactacgctgcggcctccgaggatggctgggtcctggggcgtggagctctggaattgctgctcggcggcaccgcctacacacaagcgacaagtgcgccacaaatctctctctcgatgcagcaagtgcagcggagggagctgcaactggtcgccgtttctgccatgctgatagattgcaagtacgaggagatttgggccccagaggtgaacgacttcatcttcatatcagatagtgcatacactagggaacagattcttgcaatggagaaggggattctgaataagcttcagtggaatctcaccattcctacaccatatgtcttcattatgatgctatctgcgtctgcagataacaaaagtgacaaggagaatgctgaggccctcaagttcaaaagattatcacagagccggcaacaactcattgattggtcagtaaaaataaagatttcaaaggagcatgggggtttcatgagatttatccaggtttcttgcctaggagcatcggcctcttcttctagaatgctgagggccaaggctgctggggaagaatctgtgttgaaggaatttcctgaggctacaattatgaggcctgcaactatgattggcacagaagatcggattttgaacagatgggtacagattcagcctgtttatgttgtggatgttgctgctgctattgtcaactccctcaaggatgatggcaccagcatgggaaagagctacggacttggtggaccagagatttatactgttcatgatctggctgagctgatgtatgagacaatatgtgaatggccacggtacatcgatgttcctcttcctattgcaagggctatcgcatctcctgaaagctga
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| Protein seq | MASGGVVKKEIGGNHDVVRFGVNDSVKGDLAPPHPLQASVHKVFFFFFFFFFFFSPPLALETLANTLNPRRARRRPSSGRTRRGSARKPSTDPPSTSARILMPKSSPSNSLSYPHANMKDVLIDDLSVARFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASEDGWVLGRGALELLLGGTAYTQATSAPQISLSMQQVQRRELQLVAVSAMLIDCKYEEIWAPEVNDFIFISDSAYTREQILAMEKGILNKLQWNLTIPTPYVFIMMLSASADNKSDKENAEALKFKRLSQSRQQLIDWSVKIKISKEHGGFMRFIQVSCLGASASSSRMLRAKAAGEESVLKEFPEATIMRPATMIGTEDRILNRWVQIQPVYVVDVAAAIVNSLKDDGTSMGKSYGLGGPEIYTVHDLAELMYETICEWPRYIDVPLPIARAIASPES
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr02 | 36051040 | 36051277 | - | OsNaBo_02g0037200.03,OsNaBo_02g0037200.02 | OsNaBo_02g0037200.02,OsNaBo_02g0037200.03,OsNaBo_02g0037200.01 | All |
| A3 | Chr02 | 36057067 | 36057870 | - | OsNaBo_02g0037200.02,OsNaBo_02g0037200.01 | OsNaBo_02g0037200.02,OsNaBo_02g0037200.04,OsNaBo_02g0037200.05,OsNaBo_02g0037200.01,OsNaBo_02g0037200.03 | All |
| RI | Chr02 | 36051791 | 36051937 | - | OsNaBo_02g0037200.02,OsNaBo_02g0037200.01 | OsNaBo_02g0037200.04,OsNaBo_02g0037200.02,OsNaBo_02g0037200.01 | All |
| SE | Chr02 | 36048975 | 36050229 | - | OsNaBo_02g0037200.03,OsNaBo_02g0037200.02 | OsNaBo_02g0037200.02,OsNaBo_02g0037200.03,OsNaBo_02g0037200.01 | All |
| A5 | Chr02 | 36051700 | 36051869 | - | OsNaBo_02g0037200.02,OsNaBo_02g0037200.01 | OsNaBo_02g0037200.02,OsNaBo_02g0037200.03,OsNaBo_02g0037200.01 | All |
| A5 | Chr02 | 36052159 | 36052543 | - | OsNaBo_02g0037200.02,OsNaBo_02g0037200.01 | OsNaBo_02g0037200.04,OsNaBo_02g0037200.02,OsNaBo_02g0037200.03,OsNaBo_02g0037200.01 | All |
| A5 | Chr02 | 36050340 | 36051011 | - | OsNaBo_02g0037200.01 | OsNaBo_02g0037200.02,OsNaBo_02g0037200.03,OsNaBo_02g0037200.01 | All |
| A5 | Chr02 | 36048975 | 36049565 | - | OsNaBo_02g0037200.04 | OsNaBo_02g0037200.04,OsNaBo_02g0037200.02,OsNaBo_02g0037200.03 | All |
| A5 | Chr02 | 36048975 | 36050229 | - | OsNaBo_02g0037200.04 | OsNaBo_02g0037200.04,OsNaBo_02g0037200.01 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 4.762067 | 32.115070 | 26.864668 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0800500 | RBH | 3.392536 | 1.788489 | 4.279819 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g55720 | RBH | 0.000000 | 0.000000 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0800500 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0037340 | SBH | 0.000000 | 0.000000 | 1.137310 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0037380 | RBH | 0.938171 | 1.059204 | 0.000000 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0037200 | RBH | 0.726908 | 0.000000 | 6.882195 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0036910 | RBH | 1.752643 | 0.851091 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0037150 | RBH | 0.000000 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0558700 | SBH | 4.9236185 | 14.8340275 | 24.7021055 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0036830 | SBH | 0.310766 | 0.228212 | 2.005664 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0589400 | SBH | 4.551027 | 12.539007 | 18.106796 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0037090 | RBH | 0.442721 | 0.540015 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0036970 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0037130 | RBH | 7.001747 | 26.108744 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0037130 | SBH | 0.854558 | 1.353698 | 1.222354 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0036800 | RBH | 0.0 | 0.000000 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G037310 | RBH | 3.154130 | 3.857224 | 15.060705 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0037150 | SBH | 6.090285 | 19.222601 | 44.207127 |
