Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0025530 | OGI:02071730 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:26304212-26307963 | ||||||||
| Gene Symbol | WAK16, OsWAK16, OsRLCK77, RLCK77, - | ||||||||||
| DNA seq | tcaccgagtcgcctcccttccactcttccagatccagccttcctcttcgtctccgatcgatgcctcgcctgactcgcatgaggggcgcatgaggatgggggccaccggccacgcatggtcgcctgagtcatcgtccttccactcttccagatccagccttcctcttcgtctctttcccttttgttcttcttcgccagatcccttggtcttctcgtagatccgtgagcctatcgtcttcaacggcaactccggtgctccggctgcgtaggtacaagcatggaaccattgtttttctttttttttctccatttccgaccctaaccttgagtgttgttggctgcttgcaggtcgcaagcccgttgcttagcggcagccgccgttgagggaccagagtgcctgcgatggacgacgatcctacctctgtcaactacgagttgaggactatggggatgcgcggtgatgacgatgatgatgtggaggaggatcgtgtggaggtgttcggcaatacctccgacatcccgatccatgtgaatgtcgatgacgacgacccgccggtcgacgacagtggcaatgggacgccgactggctctagtgcgacttgtaccaacaagaagaccaaaacctccaaggtatgggatgactttgaggaactttatgaaatgaccaatggtaatagggttcgagtctctgctaaatgcaattactgtcataaaactttgagtgctcgttcttctgctgacactggacatttgcttaggcatattaagtcatgcaaacctagaaagcttgggtctaatgctttgcctcagtccatgcttagatttagtgcagatggttctgttattccatgggaatatagtcctgaagatgctaggtttgaattgtgtagattgattgctagagaggatcttccaatcagttttggtcaatctcctgcttttgtgaactatattaaggctgctcataaccctagatttgttcctgtctctagacaaactactaccagagatttttataagttgtttaaggatcgtcgttctgttattattgatcgtctcaattctgctagctctattgctttgacatctgatatatggtctggtcatgctaaggaagattatttgagtgttgtagctcactttgttaattctgattggcaattagaaaagagggtcttgggtcttaggcttattgatgagtcacatactggtgctaatattgctgagcgtgtgattgctgttgctgaagaatatggtattactgataaggttttctctattacattagacaatgcttctgctaattctaaagctatgatcacccttactcctgctctgtctggttatattggtgatttatttttgcatcaacgctgtgcatgtcatatcatcaatttgattgttaaggctggacttgacaagttcaagcccatgctaaatgacattagagctaccatttcattcttgaatgcatctaatcagcgcattgctacatataaaaatgtttgcattgctgcgggttatcgtcctcgtatgtttggtttggacatggatgttagatggaattcaacttatctaatgcttaagcatctcataccacatagggaaccattcacagtatttattagtacacaacatccttttgttaatgaccatccattactcacagacttacattgggcatgtgctgaatctgttttgtgtttccttgaacaattttatgattcaactgttgttttgtctggtgtttattatccaacatctccattaatcatgcatcacattttagagattgctggacatctaaacacatatggcaatgttcaaaacattgcaaatgttgttggtcccatgaaaactaagtttatgaactattggtctaaaattccaattctttattcatttgcatttatcttggaccctagggccaagattagggggtttagtaaagtgcttcagattatggctcaactcattggtgatgattattctgcttatttaacaactgttagagcttcattgtttgatacttttgctaagtatgaaagaaagtttggttctgttagattgcataattccactattccaggcccttccactggtaagaaaaggactgcatgggggaagatttttggttctgttgttgctgctgggcttggtgctggtaatgcaggtgccagtccaggtgctggtaatgctggtgccagtccaggtgctgggcttggtgctggtaatgctggtgccagtccaggtgctgggcttggtgctggttcattatccaggatgacatctgctactgctttgcttcaggcagcttcttcaactgctaatctcaattcttctgaactgtctgcatatcttgacagtgacactatcaaccaatatgatgatgacttcaatatccttagttggtggcaacagcacaaactaacttatcctgttctttcaatcttagctaaagatgttatgactgttcctgtttctactatatcgtccgagtctacttttagcttaactggcaggatcatcgaggaccgtctgcggcgtctaaaccctaggctggtggaaattctggcagtgatcaaggactgggagctagcagatgcaaaaagtcagcatactactgagaatgtggagcttcaaaatgcttatgagaatatgtatcttgatgatgaaattgatgtaaacccttgaactggatgattgtaattgatatgaacattttagctatgggttgtactcttttcctttctagggttttctcacgaggtgtgagtttttacctagaaaggtttttaatgaggcagccattgcacaatcacagcttatataaaCcccttttatattctaactttctaaggtttgtgattctgagatggacttgatggattatagtagatgacttgatgtatgcatttgatgaattgatttgaactgattgtaaatctgtgagactgtgacttgatgaattggtgacttgaagaattgttcatttgtttgtaaatctgtgcttgtaaatctgtgacttgatgtatgcatgatttgataaactggtgacttgatgaattgtttgtgattctttgacttatttgatgaattacatgtgaatttcatgaatttgatgtgttatgtcaatttgttgtgttgaattgaacctttgaaggggttttttgccagggcgtgcctgggccggcacgggcacgatgggcttgccgggccgtcgggccagcccggcacggcccgaggctacttgggccgtgcctgggccgtggttatagcccgtggactggcacggcacggcacggcttgttcgtcgggccgtgccggcccgactgacctcggcccaggcccggtcgtgcctgggtcgtgccgtgccgggcggcccatatggccaactatatcagtacctggcttcattgtaatgttgaagtgcatgggtgcccaaagatcatcgtcacctacatataagatctgggtggtgcaatctttcatatagagcttaggagttttggtgctggtgttgcacttaagctcgaagccttcccggaagcagcctggcccaatcccaaagggataggcgatgtcgtcaacatccccgcagctagaggggcagtgagcgagggaatcattagaagggatagacaagagccctccgccatctccatagactgcagctaatgctcgaggcgtagtagcagccgagcacactagcacaaaggaaatggcacaagctgccacaaagctcgacctcat
More
|
||||||||||
| CDS seq | atgaggtcgagctttgtggcagcttgtgccatttcctttgtgctagtgtgctcggctgctactacgcctcgagcattagctgcagtctatggagatggcggagggctcttgtctatcccttctaatgattccctcgctcactgcccctctagctgcggggatgttgacgacatcgcctatccctttgggattgggccaggctgcttccgggaaggcttcgagcttaagtgcaacaccagcaccaaaactcctaagctctatatgaaagattgcaccacccagatcttatatgtagccggagcaccggagttgccgttgaagacgataggctcacggatctacgagaagaccaagggatctggcgaagaagaacaaaagggaaagagacgaagaggaaggctggatctggaagagtggaaggacgatgactcaggcgaccatgcgtggccggtggcccccatcctcatgcgcccctcatgcgagtcaggcgaggcatcgatcggagacgaagaggaaggctggatctggaagagtggaagggaggcgactcggtga
More
|
||||||||||
| Protein seq | MRSSFVAACAISFVLVCSAATTPRALAAVYGDGGGLLSIPSNDSLAHCPSSCGDVDDIAYPFGIGPGCFREGFELKCNTSTKTPKLYMKDCTTQILYVAGAPELPLKTIGSRIYEKTKGSGEEEQKGKRRRGRLDLEEWKDDDSGDHAWPVAPILMRPSCESGEASIGDEEEGWIWKSGREATR |
||||||||||
| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0025530 | OsLaMu_02g0025530.01 | Chr02 | 26304212 | 26307963 | - | NAM | ||
| CDS seq | atgaggtcgagctttgtggcagcttgtgccatttcctttgtgctagtgtgctcggctgctactacgcctcgagcattagctgcagtctatggagatggcggagggctcttgtctatcccttctaatgattccctcgctcactgcccctctagctgcggggatgttgacgacatcgcctatccctttgggattgggccaggctgcttccgggaaggcttcgagcttaagtgcaacaccagcaccaaaactcctaagctctatatgaaagattgcaccacccagatcttatatgtagccggagcaccggagttgccgttgaagacgataggctcacggatctacgagaagaccaagggatctggcgaagaagaacaaaagggaaagagacgaagaggaaggctggatctggaagagtggaaggacgatgactcaggcgaccatgcgtggccggtggcccccatcctcatgcgcccctcatgcgagtcaggcgaggcatcgatcggagacgaagaggaaggctggatctggaagagtggaagggaggcgactcggtga
More
|
|||||||
| Protein seq | MRSSFVAACAISFVLVCSAATTPRALAAVYGDGGGLLSIPSNDSLAHCPSSCGDVDDIAYPFGIGPGCFREGFELKCNTSTKTPKLYMKDCTTQILYVAGAPELPLKTIGSRIYEKTKGSGEEEQKGKRRRGRLDLEEWKDDDSGDHAWPVAPILMRPSCESGEASIGDEEEGWIWKSGREATR |
|||||||
| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0633066 | SBH | 0.088165 | 0.000000 | 0.796439 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g42190 | SBH | 0.065456 | 0.000000 | 0.194494 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0633066 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0026190 | SBH | 0.0 | 0.0 | 0.236469 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0026310 | SBH | 0.0 | 0.0 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0026160 | SBH | 0.113933 | 0.000000 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0025720 | SBH | 0.023629 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0025840 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0530300 | RBH | 0.097004 | 0.0197975 | 2.2692215 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0025660 | SBH | 0.123555 | 0.0 | 0.054398 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0441400 | SBH | 0.7424955 | 3.3441015 | 0.7209015 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0026020 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0025680 | SBH | 0.105345 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0026060 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0025880 | SBH | 0.075280 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0025420 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G026170 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0025920 | SBH | 0.0 | 0.000000 | 0.0 |
