Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsLaMu_02g0018480 | OGI:02001240 | 16/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:19527543-19531916 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | gaaaggagaaagaagcgagcgcatggagttcatcgggtgaggttcttggtagtaggagattcttctccaatccgtgggagaagagctaggaggagcggaggaatccgtgtcccctcccgcggacctgcttctccggctgcccgtaagttggatttttctctgcttcgctccctcccctcctcgcgccattgtttttttcttggtcctttggctctcgggtgcatcgccaccgcgattcgatctggggggagagggaggaggcgcaggcggagcgcacgagggaggtgggtggaggagagggtggggggcggcggcttagctgctgtggacggcagaaggggtttcgtgtgttccagacaagaatcctgaggagtgagagcattacattgacatcctcatcagggctttgggtgtggaaagaagcgtataatgatgtattccttgttcagaatttactgttggttaaaaagtatatgtgcttcaacttttgaggacagggccatagggggtgaaaataagatataagtaaataacttacaaggaaacatggatgagagtgtgtaccataagcacaatttcgttttgtttcaataccaaatattttcttttaactaaatggattcattgacaataaggtatttgcttcaatgtgcgttcttattacttcatatcataccacattttgtgattggggaatttcatatagtttcagatgctatgttaggttgagccatatcgtccaaccctgctcactccccctcctaaatttccattttccatgttttgttgtgcaggaaacatgctttctCcctatcagcctttgtgatgcattgaacaGgggttgagaagtactgtaatttttgtaatggctgggtgttccttggcaacactgagaggacaacatcgagggagatggatccaatctcacagcaagctccccacaaggattatgtctattaatctgccaaagaggtaaaaaagttttccgtactctgttgatattagtcatcttgagttcttcaatggtaatttaatgtttgattttcttcatttgcagtaatcacagtcacaagattcagcttccatgccagtccaatttaggaagaaaacagaaaactggtgcatttgctcctttgggttttcatggaaggtgttgccggatcgaaacatcagttaaatgttatttcttgcagtcgcttgtggattctgagagtatgatctcaccaaatttgttattgctttctgatgaagctctactaactatcagtatagtttttgcatatttggctggagttgtaccctctggccatgcatttcctcatgctagaaaccatagtcaaaaccaacatcttggagctccaggtccatctgattctggtaggtaagagtagctgcttaagtatgacttctagatctcaaaacattggcttgacaataaaaactgataatgtattctttccattccaatttctagggatatgaaatggttacctgaagggaatactaggttttaccccagcaatacatggagtgaagtgagaatgaaactttcagaagccttgcaatcaaatggtcgagatgccacttcggatggcagcgatagtgaactcaagaacaatcgcaaaaattatcctttgagtatgcttgcaattcatggtggtcccaggctgcggcttcttctagctacctttcagctacttgagatggaggcaagagggccatcaactttttctttctaatatgctggggattatcatggatgaatactgaagattacccatgcatacttcacttattttttttctaagggagagagcatacttcaaaaagcttaagcaagctggtagttgtgatattttctactaaaatggtgccactatccttctgtagagtattataatggatgaatcctgaagattgttcttgcatgtttcactagcttagttaagctttctctctttgtttttttaatgttacttgactagccactagaactatggactaaagttcagtcagtatcaagatatgtttttctttctaaccagcacagctgtataatatgtcagaacacatgtgttgattttgttgtagttaatttgatcttgtgcaggtaagaaatgttcctgaaagttctgaacttgtagatgggatcaaatggttgcaaatatcaactacgttgattgatggcttgattgaaccaacatttatgaaatggattcaagaagaaaaagcctgggagaacagcaagatcaatgaagtataccattattttcaactgtcttacatttctccatattgtcatgccttcaagtccctgatagttttcttttttcctgataaaggaacttatgaagacggtaaccagcaaaataaaggaggatgacaggatcttgaagaggttcaacagattagggaaatctgaactctatttggatctgctttatttcctgagatttggttctgcaaggtactatttatcttcacttcttgatccatatggtaccacttttttccatctgaactccatctcctgtttaagagtttaagatggcactattggttgtttattgtctgtacttatatccatatatagctatttaccaaacagtaatccttccataaggtaaatgagttcattcttatccttcatttcctgatggcaggtcttatagctattttgacgctaaatttctggctgaacatggagcgagaattttggaggacctggttattttcttagctgacgcggtcgctagtatttacatagagcttatatcagttgatggtgatatgccgactgatgttgttggttccagcttagctctatgctcgctgtcaaccagagaacttcaaagaatgcgtaacgaggtaatagttgtggataattcaaggtgttgcttgtgcttttactgttcaaatgtgcttttcgaaacttgcttgtatatacaccAaaaaataagcacTttttatgctcacagtttggattcggtaagttgatgatttatagttggctttgcatgaagttagtagtctccttggagacaagccaacaaatatttaaatcctacccaagctggaaaccatatcaacagactaacagatcttgaaatattttttcttcaagtactcttattgttctcatatggtattgtagtgttatatcatcactaattaactacgaccagccttctcaagttctcatcatgatttacgtgtaagaaatgaactgtgaacagagacgatgctgcgattctaatatactacattttgtccacatgtataccttctgtgtcattttgtcttaaccttataagacattttgattgccaaacaaatatttttaagtgaatatcacagtacatgttacgtgaataatctaattgggcaaatatttgcactttgaactctcctcTttttggttaatatttttaagtttttaggaaacatctctattccagttttttcttacttccagatttgataatccagtgctaaaTttttttaaggtggcaattaatgggtggctgcaccagtattttgagtcagttgtctcaatgtacgaggacaggtttgagttatatgttttatccagaaaactttgtgaaaaaccagcagataatcaagctgaagtgacaaactggtggaggcttggatttggaaagccttccaccgttactcttctagagtacgttcacataagctcattttctcttccggtgagaaggacgaaagaattgagagctctggctggatggtattcgcaatttccttttctaccattcttttcatgataattcatggaaacatttctgtgcgacttggggcaagatgaacataactttactctgttctgttgcaggaggtattatttcagcctattattagaaatgtcagatattgccatgcctttcataagggctgttgtcaccaaagttagtgctgcagtgtcgtacttctgggtgtccatgataggaaggtctctgggattgattttctcagggataaggcaatcacttggttggagatgatcagatgtttctttggtttttgattgtgagatcttgtgactgagcgatatttgcctcgcagtcatgtccagttttgtcaatttatataggcttttcgttgacctttttttttactgttgagatggctgacttctggtcctcgttatacatgttctgtatcacataatgtaacaaagttcattgatctgaccaaagggtgaaaattatttgttaatcttggaatgcatcatgtggtatataacattttgaaggcaaaccacacatttcaggacattatggcagaagtcagattgtctgatccaaaaacttgtacagatttatccagtctgcaccaatttgagaaaac
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CDS seq | atggctgggtgttccttggcaacactgagaggacaacatcgagggagatggatccaatctcacagcaagctccccacaaggattatgtctattaatctgccaaagagtaatcacagtcacaagattcagcttccatgccagtccaatttaggaagaaaacagaaaactggtgcatttgctcctttgggttttcatggaaggtgttgccggatcgaaacatcagttaaatgttatttcttgcagtcgcttgtggattctgagagtatgatctcaccaaatttgttattgctttctgatgaagctctactaactatcagtatagtttttgcatatttggctggagttgtaccctctggccatgcatttcctcatgctagaaaccatagtcaaaaccaacatcttggagctccaggtccatctgattctggtagggatatgaaatggttacctgaagggaatactaggttttaccccagcaatacatggagtgaagtgagaatgaaactttcagaagccttgcaatcaaatggtcgagatgccacttcggatggcagcgatagtgaactcaagaacaatcgcaaaaattatcctttgagtatgcttgcaattcatggtggtcccaggctgcggcttcttctagctacctttcagctacttgagatggaggtaagaaatgttcctgaaagttctgaacttgtagatgggatcaaatggttgcaaatatcaactacgttgattgatggcttgattgaaccaacatttatgaaatggattcaagaagaaaaagcctgggagaacagcaagatcaatgaagaacttatgaagacggtaaccagcaaaataaaggaggatgacaggatcttgaagaggttcaacagattagggaaatctgaactctatttggatctgctttatttcctgagatttggttctgcaaggtcttatagctattttgacgctaaatttctggctgaacatggagcgagaattttggaggacctggttattttcttagctgacgcggtcgctagtatttacatagagcttatatcagttgatggtgatatgccgactgatgttgttggttccagcttagctctatgctcgctgtcaaccagagaacttcaaagaatgcgtaacgaggtggcaattaatgggtggctgcaccagtattttgagtcagttgtctcaatgtacgaggacaggtttgagttatatgttttatccagaaaactttgtgaaaaaccagcagataatcaagctgaagtgacaaactggtggaggcttggatttggaaagccttccaccgttactcttctagagtacgttcacataagctcattttctcttccggtgagaaggacgaaagaattgagagctctggctggatggaggtattatttcagcctattattagaaatgtcagatattgccatgcctttcataagggctgttgtcaccaaagttagtgctgcagtgtcgtacttctgggtgtccatgataggaaggtctctgggattgattttctcagggataaggcaatcacttggttggagatga
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Protein seq | MAGCSLATLRGQHRGRWIQSHSKLPTRIMSINLPKSNHSHKIQLPCQSNLGRKQKTGAFAPLGFHGRCCRIETSVKCYFLQSLVDSESMISPNLLLLSDEALLTISIVFAYLAGVVPSGHAFPHARNHSQNQHLGAPGPSDSGRDMKWLPEGNTRFYPSNTWSEVRMKLSEALQSNGRDATSDGSDSELKNNRKNYPLSMLAIHGGPRLRLLLATFQLLEMEVRNVPESSELVDGIKWLQISTTLIDGLIEPTFMKWIQEEKAWENSKINEELMKTVTSKIKEDDRILKRFNRLGKSELYLDLLYFLRFGSARSYSYFDAKFLAEHGARILEDLVIFLADAVASIYIELISVDGDMPTDVVGSSLALCSLSTRELQRMRNEVAINGWLHQYFESVVSMYEDRFELYVLSRKLCEKPADNQAEVTNWWRLGFGKPSTVTLLEYVHISSFSLPVRRTKELRALAGWRYYFSLLLEMSDIAMPFIRAVVTKVSAAVSYFWVSMIGRSLGLIFSGIRQSLGWR |
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Function | - |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_02g0018480 | OsLaMu_02g0018480.03 | Chr02 | 19527543 | 19531916 | + | NAM | ||
CDS seq | atgatctcaccaaatttgttattgctttctgatgaagctctactaactatcagtatagtttttgcatatttggctggagttgtaccctctggccatgcatttcctcatgctagaaaccatagtcaaaaccaacatcttggagctccaggtccatctgattctggtagggatatgaaatggttacctgaagggaatactaggttttaccccagcaatacatggagtgaagtgagaatgaaactttcagaagccttgcaatcaaatggtcgagatgccacttcggatggcagcgatagtgaactcaagaacaatcgcaaaaattatcctttgagtatgcttgcaattcatggtggtcccaggctgcggcttcttctagctacctttcagctacttgagatggaggtaagaaatgttcctgaaagttctgaacttgtagatgggatcaaatggttgcaaatatcaactacgttgattgatggcttgattgaaccaacatttatgaaatggattcaagaagaaaaagcctgggagaacagcaagatcaatgaagaacttatgaagacggtaaccagcaaaataaaggaggatgacaggatcttgaagaggttcaacagattagggaaatctgaactctatttggatctgctttatttcctgagatttggttctgcaaggtcttatagctattttgacgctaaatttctggctgaacatggagcgagaattttggaggacctggttattttcttagctgacgcggtcgctagtatttacatagagcttatatcagttgatggtgatatgccgactgatgttgttggttccagcttagctctatgctcgctgtcaaccagagaacttcaaagaatgcgtaacgaggtggcaattaatgggtggctgcaccagtattttgagtcagttgtctcaatgtacgaggacaggtttgagttatatgttttatccagaaaactttgtgaaaaaccagcagataatcaagctgaagtgacaaactggtggaggcttggatttggaaagccttccaccgttactcttctagagtacgttcacataagctcattttctcttccggtgagaaggacgaaagaattgagagctctggctggatggaggtattatttcagcctattattagaaatgtcagatattgccatgcctttcataagggctgttgtcaccaaagttagtgctgcagtgtcgtacttctgggtgtccatgataggaaggtctctgggattgattttctcagggataaggcaatcacttggttggagatga
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Protein seq | MISPNLLLLSDEALLTISIVFAYLAGVVPSGHAFPHARNHSQNQHLGAPGPSDSGRDMKWLPEGNTRFYPSNTWSEVRMKLSEALQSNGRDATSDGSDSELKNNRKNYPLSMLAIHGGPRLRLLLATFQLLEMEVRNVPESSELVDGIKWLQISTTLIDGLIEPTFMKWIQEEKAWENSKINEELMKTVTSKIKEDDRILKRFNRLGKSELYLDLLYFLRFGSARSYSYFDAKFLAEHGARILEDLVIFLADAVASIYIELISVDGDMPTDVVGSSLALCSLSTRELQRMRNEVAINGWLHQYFESVVSMYEDRFELYVLSRKLCEKPADNQAEVTNWWRLGFGKPSTVTLLEYVHISSFSLPVRRTKELRALAGWRYYFSLLLEMSDIAMPFIRAVVTKVSAAVSYFWVSMIGRSLGLIFSGIRQSLGWR
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_02g0018480 | OsLaMu_02g0018480.02 | Chr02 | 19527543 | 19531916 | + | NAM | ||
CDS seq | atgccagtccaatttaggaagaaaacagaaaactggtgcatttgctcctttgggttttcatggaaggtgttgccggatcgaaacatcatttttgcatatttggctggagttgtaccctctggccatgcatttcctcatgctagaaaccatagtcaaaaccaacatcttggagctccaggtccatctgattctggtagggatatgaaatggttacctgaagggaatactaggttttaccccagcaatacatggagtgaagtgagaatgaaactttcagaagccttgcaatcaaatggtcgagatgccacttcggatggcagcgatagtgaactcaagaacaatcgcaaaaattatcctttgagtatgcttgcaattcatggtggtcccaggctgcggcttcttctagctacctttcagctacttgagatggaggtaagaaatgttcctgaaagttctgaacttgtagatgggatcaaatggttgcaaatatcaactacgttgattgatggcttgattgaaccaacatttatgaaatggattcaagaagaaaaagcctgggagaacagcaagatcaatgaagaacttatgaagacggtaaccagcaaaataaaggaggatgacaggatcttgaagaggttcaacagattagggaaatctgaactctatttggatctgctttatttcctgagatttggttctgcaaggtcttatagctattttgacgctaaatttctggctgaacatggagcgagaattttggaggacctggttattttcttagctgacgcggtcgctagtatttacatagagcttatatcagttgatggtgatatgccgactgatgttgttggttccagcttagctctatgctcgctgtcaaccagagaacttcaaagaatgcgtaacgaggtggcaattaatgggtggctgcaccagtattttgagtcagttgtctcaatgtacgaggacaggtttgagttatatgttttatccagaaaactttgtgaaaaaccagcagataatcaagctgaagtgacaaactggtggaggcttggatttggaaagccttccaccgttactcttctagagtacgttcacataagctcattttctcttccggtgagaaggacgaaagaattgagagctctggctggatggaggtattatttcagcctattattagaaatgtcagatattgccatgcctttcataagggctgttgtcaccaaagttagtgctgcagtgtcgtacttctgggtgtccatgataggaaggtctctgggattgattttctcagggataaggcaatcacttggttggagatga
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Protein seq | MPVQFRKKTENWCICSFGFSWKVLPDRNIIFAYLAGVVPSGHAFPHARNHSQNQHLGAPGPSDSGRDMKWLPEGNTRFYPSNTWSEVRMKLSEALQSNGRDATSDGSDSELKNNRKNYPLSMLAIHGGPRLRLLLATFQLLEMEVRNVPESSELVDGIKWLQISTTLIDGLIEPTFMKWIQEEKAWENSKINEELMKTVTSKIKEDDRILKRFNRLGKSELYLDLLYFLRFGSARSYSYFDAKFLAEHGARILEDLVIFLADAVASIYIELISVDGDMPTDVVGSSLALCSLSTRELQRMRNEVAINGWLHQYFESVVSMYEDRFELYVLSRKLCEKPADNQAEVTNWWRLGFGKPSTVTLLEYVHISSFSLPVRRTKELRALAGWRYYFSLLLEMSDIAMPFIRAVVTKVSAAVSYFWVSMIGRSLGLIFSGIRQSLGWR
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_02g0018480 | OsLaMu_02g0018480.04 | Chr02 | 19527543 | 19531871 | + | NAM | ||
CDS seq | atggctgggtgttccttggcaacactgagaggacaacatcgagggagatggatccaatctcacagcaagctccccacaaggattatgtctattaatctgccaaagagtaatcacagtcacaagattcagcttccatgccagtccaatttaggaagaaaacagaaaactggtgcatttgctcctttgggttttcatggaaggtgttgccggatcgaaacatcagttaaatgttatttcttgcagtcgcttgtggattctgagagtatgatctcaccaaatttgttattgctttctgatgaagctctactaactatcagtatagtttttgcatatttggctggagttgtaccctctggccatgcatttcctcatgctagaaaccatagtcaaaaccaacatcttggagctccaggtccatctgattctggtagggatatgaaatggttacctgaagggaatactaggttttaccccagcaatacatggagtgaagtgagaatgaaactttcagaagccttgcaatcaaatggtcgagatgccacttcggatggcagcgatagtgaactcaagaacaatcgcaaaaattatcctttgagtatgcttgcaattcatggtggtcccaggctgcggcttcttctagctacctttcagctacttgagatggaggtaagaaatgttcctgaaagttctgaacttgtagatgggatcaaatggttgcaaatatcaactacgttgattgatggcttgattgaaccaacatttatgaaatggattcaagaagaaaaagcctgggagaacagcaagatcaatgaagaacttatgaagacggtaaccagcaaaataaaggaggatgacaggatcttgaagaggttcaacagattagggaaatctgaactctatttggatctgctttatttcctgagatttggttctgcaaggtcttatagctattttgacgctaaatttctggctgaacatggagcgagaattttggaggacctggttattttcttagctgacgcggtcgctagtatttacatagagcttatatcagttgatggtgatatgccgactgatgttgttggttccagcttagctctatgctcgctgtcaaccagagaacttcaaagaatgcgtaacgaggtggcaattaatgggtggctgcaccagtattttgagtcagttgtctcaatgtacgaggacaggtttgagttatatgttttatccagaaaactttgtgaaaaaccagcagataatcaagctgaagtgacaaactggtggaggcttggatttggaaagccttccaccgttactcttctagagtacgttcacataagctcattttctcttccggtgagaaggacgaaagaattgagagctctggctggatggaggtattatttcagcctattattagaaatgtcagatattgccatgcctttcataagggctgttgtcaccaaagttagtgctgcagtgtcgtacttctgggtgtccatgataggaaggtctctgggattgattttctcagggataaggcaatcacttggttggagatga
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Protein seq | MAGCSLATLRGQHRGRWIQSHSKLPTRIMSINLPKSNHSHKIQLPCQSNLGRKQKTGAFAPLGFHGRCCRIETSVKCYFLQSLVDSESMISPNLLLLSDEALLTISIVFAYLAGVVPSGHAFPHARNHSQNQHLGAPGPSDSGRDMKWLPEGNTRFYPSNTWSEVRMKLSEALQSNGRDATSDGSDSELKNNRKNYPLSMLAIHGGPRLRLLLATFQLLEMEVRNVPESSELVDGIKWLQISTTLIDGLIEPTFMKWIQEEKAWENSKINEELMKTVTSKIKEDDRILKRFNRLGKSELYLDLLYFLRFGSARSYSYFDAKFLAEHGARILEDLVIFLADAVASIYIELISVDGDMPTDVVGSSLALCSLSTRELQRMRNEVAINGWLHQYFESVVSMYEDRFELYVLSRKLCEKPADNQAEVTNWWRLGFGKPSTVTLLEYVHISSFSLPVRRTKELRALAGWRYYFSLLLEMSDIAMPFIRAVVTKVSAAVSYFWVSMIGRSLGLIFSGIRQSLGWR
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_02g0018480 | OsLaMu_02g0018480.01 | Chr02 | 19527543 | 19531916 | + | NAM | ||
CDS seq | atgaaatggattcaagaagaaaaagcctgggagaacagcaagatcaatgaagaacttatgaagacggtaaccagcaaaataaaggaggatgacaggatcttgaagaggttcaacagattagggaaatctgaactctatttggatctgctttatttcctgagatttggttctgcaaggtcttatagctattttgacgctaaatttctggctgaacatggagcgagaattttggaggacctggttattttcttagctgacgcggtcgctagtatttacatagagcttatatcagttgatggtgatatgccgactgatgttgttggttccagcttagctctatgctcgctgtcaaccagagaacttcaaagaatgcgtaacgaggtggcaattaatgggtggctgcaccagtattttgagtcagttgtctcaatgtacgaggacaggtttgagttatatgttttatccagaaaactttgtgaaaaaccagcagataatcaagctgaagtgacaaactggtggaggcttggatttggaaagccttccaccgttactcttctagagtacgttcacataagctcattttctcttccggtgagaaggacgaaagaattgagagctctggctggatggaggtattatttcagcctattattagaaatgtcagatattgccatgcctttcataagggctgttgtcaccaaagttagtgctgcagtgtcgtacttctgggtgtccatgataggaaggtctctgggattgattttctcagggataaggcaatcacttggttggagatga
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Protein seq | MKWIQEEKAWENSKINEELMKTVTSKIKEDDRILKRFNRLGKSELYLDLLYFLRFGSARSYSYFDAKFLAEHGARILEDLVIFLADAVASIYIELISVDGDMPTDVVGSSLALCSLSTRELQRMRNEVAINGWLHQYFESVVSMYEDRFELYVLSRKLCEKPADNQAEVTNWWRLGFGKPSTVTLLEYVHISSFSLPVRRTKELRALAGWRYYFSLLLEMSDIAMPFIRAVVTKVSAAVSYFWVSMIGRSLGLIFSGIRQSLGWR
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsLaMu_02g0018480 | OsLaMu_02g0018480.05 | Chr02 | 19529461 | 19531916 | + | NAM | ||
CDS seq | atgaaatggattcaagaagaaaaagcctgggagaacagcaagatcaatgaagaacttatgaagacggtaaccagcaaaataaaggaggatgacaggatcttgaagaggttcaacagattagggaaatctgaactctatttggatctgctttatttcctgagatttggttctgcaaggtcttatagctattttgacgctaaatttctggctgaacatggagcgagaattttggaggacctggttattttcttagctgacgcggtcgctagtatttacatagagcttatatcagttgatggtgatatgccgactgatgttgttggttccagcttagctctatgctcgctgtcaaccagagaacttcaaagaatgcgtaacgaggtggcaattaatgggtggctgcaccagtattttgagtcagttgtctcaatgtacgaggacaggtttgagttatatgttttatccagaaaactttgtgaaaaaccagcagataatcaagctgaagtgacaaactggtggaggcttggatttggaaagccttccaccgttactcttctagagtacgttcacataagctcattttctcttccggtgagaaggacgaaagaattgagagctctggctggatggaggtattatttcagcctattattagaaatgtcagatattgccatgcctttcataagggctgttgtcaccaaagttagtgctgcagtgtcgtacttctgggtgtccatgataggaaggtctctgggattgattttctcagggataaggcaatcacttggttggagatga
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Protein seq | MKWIQEEKAWENSKINEELMKTVTSKIKEDDRILKRFNRLGKSELYLDLLYFLRFGSARSYSYFDAKFLAEHGARILEDLVIFLADAVASIYIELISVDGDMPTDVVGSSLALCSLSTRELQRMRNEVAINGWLHQYFESVVSMYEDRFELYVLSRKLCEKPADNQAEVTNWWRLGFGKPSTVTLLEYVHISSFSLPVRRTKELRALAGWRYYFSLLLEMSDIAMPFIRAVVTKVSAAVSYFWVSMIGRSLGLIFSGIRQSLGWR
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Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
RI | Chr02 | 19528600 | 19528923 | + | OsLaMu_02g0018480.04,OsLaMu_02g0018480.01 | OsLaMu_02g0018480.01,OsLaMu_02g0018480.04,OsLaMu_02g0018480.02 | All |
RI | Chr02 | 19528337 | 19528923 | + | OsLaMu_02g0018480.03 | OsLaMu_02g0018480.01,OsLaMu_02g0018480.03,OsLaMu_02g0018480.04 | All |
A5 | Chr02 | 19529251 | 19529653 | + | OsLaMu_02g0018480.01 | OsLaMu_02g0018480.01,OsLaMu_02g0018480.03,OsLaMu_02g0018480.04,OsLaMu_02g0018480.02 | All |
Expression
Leaf | Root | Panicle | |
FPKM | 2.438780 | 7.199912 | None |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0515000 | RBH | 4.216087 | 3.861277 | 3.697700 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g31070 | RBH | 3.139986 | 2.706475 | 1.001990 |
Nipponbare | IRGSP 1.0 | RAP-db | Os02g0515000 | RBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0018770 | RBH | 1.269768 | 17.172306 | 6.669565 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0018930 | RBH | 0.483823 | 2.903237 | 1.728157 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0018870 | RBH | 4.557344 | 2.329633 | 8.772382 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0018640 | RBH | 0.483029 | 0.334897 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0018580 | RBH | 15.044301 | 13.824676 | 13.958940 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0309200 | RBH | 21.963361 | 11.371053 | 16.0759665 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0018300 | RBH | 0.643853 | 0.692669 | 1.650341 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0328200 | SBH | 12.632153 | 7.188125 | 19.8525065 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0018840 | RBH | 0.675557 | 0.249068 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0018550 | RBH | 1.993482 | 8.439651 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0018960 | RBH | 9.409842 | 6.033744 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0018700 | RBH | 3.824123 | 0.906752 | 2.399310 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G018890 | RBH | 1.043644 | 5.890951 | 2.983186 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0018590 | RBH | 5.094174 | 14.505994 | 6.683112 |