Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_02g0017380 | OGI:02050040 | 11/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr02:18122868-18131325 | ||||||||
| Gene Symbol | ANK1, OsANK1 | ||||||||||
| DNA seq | attataccaattgcttgattatactgaagtaactgctcgacgtccaacaaaatactcgtagattggaacctcacattcagtgataatagttgcgatcagtttcaggtaaaatttacaaagccgtgccagttgcaaaaggtttttaccaggttcttgttttccggactccagattgagttaattacatagtacaagtttgagtcttgaactgacatgtaattcttgaactgacaggtaattcaggcagcacgagatttcttcaatgatttgaaagcctccctgcacaataagattaagtcaatcactgtggtaaacaggcatcaaaaagaagagacatggtacatccaaagatgagatgattatctacaggttttaaaagattttatgtgattaaattcatcaggaaaagtcagcacatgtatcatatgtatctacaggattatttccaaagatttcacatggacagagataaataggttaccgtagaccattttcaatctccatattcgctgggtccaatttaagaccatcaagaaatgcatcgcaagccttatcagtcctgaaaacaaaataattgttgcatataaaaaacgattttgcctgacaaaaaatatcagcttggaagtaaaataaatattacatctcacctttaagaacatgtgagcagccccttccctgtagcaggcctttggccaatcgggacacaacatcctgcagaggtgagcatctgtcaaagctttcattccttcacccatcttaagccaagcaaatgctcctattcgagtacaagttccatcttcaggttcaagattcgtcgcctaacagaaggggaaaaaaagcatatcaacagttaccacaattgtcaattggtacttgaatccaatccaacagagtgatatgcccgttgaagtggttttataatagatgtacagtctggtgtgacatcagtacaactgaagttctccagcaaatcgacattggagcatagaaaatatatatcatattagattatcttcaatagcgaaacacaaagacaagttacaaaaaaccctatttgatattatataacaaagattgccaggaatgccaattgccaaatagagaaaaaatggtagcaacattgcattagctcattatcacaatgaggatggcttctttaacagacctctcaggaaactagcattataatttactccctccatcctacattatagtaacttattatggcattcagaagttgtccataaatatagtgacttttccacctactttctcatctcaagttcttaaccaattacaaccatctcgcatttgatttctccacctatcctcatctaaaccaatcaaaaccatttctcatatcaaccttaatttttgctaaaactcacagaaatgattatattttgggatagagggagtataacataaatgtaaaaagttcaagaaaattgaaaattaaagcattaaaggaatcaattaaaaacatgaattacactactatttgaattcttgctagagactgaaaactgtgcacgtcatcaaatcatgagttcacacactacacgagagtttggtaatagaatagggtgaaacacataccatagtgtagagttttgtggcagtaagatagtcctctctcttttatgccctacttccttctaacttcagatcagctggtcttattttgtacatggggtcatcctgaaattataaaaagaagcagatgatactagttgaggacaagcatgtgaaggctaatcaatatgttgatttttaggtcatcttacattccaagatccaatctttgtatattgtgaacaacaaacacagtagttcaacaagtatataggtttagtggtagaaaggttccactagcgtccattgtccactagattcatatttttgaacatacattcatattgtcttaatttgtagttattaatgctatcatttttggaatgacttgttgatgatggtgagctctacatccatccccttcactttacaagatatttgaatagatatatgcaaaaacaaagaatcttttgtgaaggattgcatcatctgaatatggctatttaaatttgctttcatagacaagaagagattttttttaaaaaaaaaagaaggaaggggtaggggagggggagggaattttaaggaacaacgtatgggctgggtcacatgaatacatgatagtgagacaatggaatggaaaacaaaaatctcaaatccacctcaatggagtgcacatcccaaatcttcaccaattatattgatctgacaagttcactttggttgcacagtcatacttgaaaaaggcaaaaagagtgaataaaaggcaacacttaagtagctagtaattgaaacttcaagcagcataccgagagacaaagcatatggataattggttttatttttctataattctgtcacccctatcagcagagatttatggagattttgtatcaaccttgagtcagggtgatgtatcttaagaacttgtatacaaaaaaaatgctctagtgcaaattacccagtcttaatactaccaggcagtaacttatagtgaatctgccacccacccacctccacattgcttccttaggcaaaagtacataccaaactttccataatccatatgctattttttaattatttgaccttataatcacaatataatatgaaaatgtccaagatggccagatgtattatagtatatacatgtagcatacgagtaaagtttacagtccctctaaaaatagtaataaattgttaaatcagcaagtgtaaacaccatccgtccttgaaaaaaatagacgggcatgtttgctgcaaaatcacattatactaaacagtactaggatatgtaggatctcattttattatccacagcaaatgcaaggtatttaggtagcaatattaaacattacaatgaagacctaattcatacctgcacatttttgtttacataagtaattatcccatcaacactccaatcatacacagatggaatacgagaagttactggaagtaggatctccacatctttccgtctgttctgaaatccaataatccaataagtccatgtacgacttgaaaagaaaatatcttttttctgaaaagctataagatttatatcatagaacaataaaacattacagcacatggaatacatacaaaaaaaagactcccaagaataagcaaacaaattgcaatcaaattgacattataatctacaccatgccaccaagtttcaaccatatcataatagacaacatgccacctgtgaggctgatgatggaacttttgatatattagtgcagcattattttatagtttagcttagagattgcctacatgagatcaactgtttggtaaaaacgatcatgtgaagttcctctgagaactatcaattatatgtaaaaaaagatgttgcatgcttaaattcagcttgagaatataaaccatctaataaatgtgtattacaatctgaaaccaatctaattataattgctcagttgtgtacctagaaattatatgcatgtgcacatccatggaacaagtaggatagtttgaattcagacataaaattaacaaattattcttaaatcacaacagaaaaactcgattagcgagtttctttaagatggAaaaaagaatgtgacgaacaacgtattgtattaaaaaaactcaccagataactgtcaatgggacattggacATatatagtagtatgagatcacaaaatagagcatcatataaaagtatgaatatcaacaatataatttccatgagtgaaagcaaccatccaatagagtaaagataatgcagtgcagaaaggaaaagagagttacttcatcaggcacattaggatcagcaccagcctcgagtaagcacttatagaaatcagttaagccttcagttgcagcagcaattaaGggggtaaaagtaccaacacccttaatatcagcaccagcctaacaaaaaaatattgcagataccttccctaaaTaagcatgtcataatttatacaatataaaaattaaatatccaccaaagtattgcctcctaaagaggagttcaataatgtgatttttcagtttgcatgtaaaaaacacagtatatcaccttaatcagaagcttcacacatttcaatgagcgaaccataagcgccgcgatgaggggtgtataaaatgtggaaaataccttattacactacaagataattaagaaaaatcagtatgcagacatgacatatgttagcagatgttttgtagacaaagaaagaggtataaacagaatatcaaataaaaccatgttgccaaaatcataaataaatttacaaatatctatatatcctatatagttggcaccaaaaacttgacatgcattgagccacatcatctagaaaataatagcctttgaatcctctcatgttttgatctcaaccatccatttgtcatgcatttacaatatatgtaatgtaaaagcacataaaccatatgcacactgttggtgagctaacattaatcagcacagtaaggatttacttttttttactgaacataaagattagagtaaaatacactggtgatccttgaaaaccgcatctaggtacaagggtgtcatctaggtccataaacttgaaaaccgcatctttagacccataaacttgctgaatgtaccaatgccggtccaaaatatgacgtgtgccacaggcatgctaacatggcaccttcaccaatgccacaccgactaacaagtaggacctacccacaaaatttctacaccaaggctcttggtccagttttttttgggtcagactgctggtccgacctggattttgtaactgtggtggcaagtcaagaaatgtttcacactcaggtaaccccaccaaagttgctcttcctctgtctccattattagggtgaaatccatcatcctgtcttccaacatctcgattcctttatgtaaccaatcactattaagcaagttttcattcaacagatggaggacaggggcgctgtaaaaattaacaaagacctcaatgctatctaccagtttagtacctcatctaatctcaatgaccttgacattgcactatgaacagtttttctttcgatttatccgtatttacaattaaatcattttaattttaataattactttgtttgggtttgaatatactcatttcatccaaacgacccgctcTttttcatggttgttcttttcagggtaaaaagtggctcatttatgatatttgacagcaataaacattttctgccagatcaaataatgaacctttcaaatgtaagcagcaaggaagggaagaaaatcatataagaaagctttacatctgcatggtggtccaataaaatcttcatacagccatcatgacttttcacggctgcaatatgcagtggcgtcccacagtcagaagatgaatcaacatcagctcctttcactagtaagacctttaatatctcgcaatttcctgaattagaaatattgtgtatacaataggtcactattatgcattattgtaaatgtgtagcagtgcagaatatacagcaagctatttgtcactccaacagttttactggtgaaatatagttaattttattacctatactagagaccataccttttcatctaatgtccagtttacatcttgttctaattgatgtcctttataccaggagaataacaaatgggctcgtgctcacatattttgacaactaatgatgagagccaagtacccaacagttataatactgatagaagcagctatgtccccatatttgtaatagtcactcatcaactatctcctcaatgcagtaatagtattagttaagttgtaaagtatattattgtttacaggctccagcaaactaatagtagttactctccaatgacatgcatatattccctgccaaactagtaaaatgtagtatgtcacaataaaatttgtgtcaaagatttagagttgacaacaatgaaagtcagttagcaggcaacttgtagctgccacctcatccatgtaatagttgctccttgattacacatatatagctgccatttgagagaaaaaaaagaactccactatgccgtctctaacatacgtagtacatatcattatgctcatcgtatagaacacaattgtgtaaaagaaatgctaacaaggtacttgtgaaggatatgcgatcattttaaaaaaaacagaggatatcaacttcaatggacctacattctctagtctatcccaattcttgtattccgttttcTttggcttgctataacaaattagcgacaaggggaaaagggattaggaaaggaaatgatgacatcacatgctaaaacaagaagatggagaaatgcaaaagggccacaaaagattagaagttagaactagagtgctaaaacactagtggcagtgacattagttgcataataattagcataaccattgataacaatattacatgctttggagttaaggggggtatatcgtacttttgcgatagttgaggggggctaaaattggacttaggctgcattcgttcccctgggttgggaacccaaccctccagcacggaaaacggagcggtccattagcgtgtgattaattaagtatttgcttttttttttcaaaaatggatcaatatgaTttttttaatcaactttcgtatagaaactttttacaaaaaaacgcaccatttagcagtttgaaaagcgtgcgcgtggaaaacgagggagaggggttgggaaccctgactatagaacacagactttcgcaactttcattatttgcaggtctccaaactagaaacaaataatatataaaaaaaaagtggtgtgcaactatgcatgcataaaataagggaccatatgcattgaaagggaccttgttcaactgctaaatggagaggagcacgcccttgttcattgggcttatcaggatttgcaccatgatcaagaagataactcacagtatacacaatcccacccagaactgcataaatcagtggcgtagcacctattggaatcattgaaaaaaaaaacaaatcagggtttcttgtaacaaacaaaagagatcaatccacactgatcacttatcaaaaaacaaaagataggaggtttgttgataacgtgataaatcaagtgcattctgttgatatcagtttgataagtaccaaaggaacaaaattaaaataataaggcgctgtttggtattggggttgacttatgataatcatgtttggtagcttttagatattttggtgttcagcaaacttattttcttttaaacagtgttacaaacaattatattattgcatcctgaaaatccggaacaattgagaaagaaacatgacaattaaataactatatcatctaaccataattaatctataaaaaaaaggcataacaaacataagtttttccacggcaacttAaaaaaataagcacaatgatgcaacaactaagcctaaataaaaagaactagcacaaagaacaaccagatatggcctacaatatatccagattacgcaatacagtagaagatgtttaaaagattattcaccagaatcaagatattacttgctcaatttaagcaaaaaccatttcagaaattgtttgctcaaattaattaccttacccagttccgttatgactataacagtacaagtaactctctcggatgaattaaacacatcaaagtaacgtacatccaacccagcctcccccccccacccccccccaaaaaaaaaaaaaaacaaaaaaaaaacaaaacaaaactcacccaccgtgcgggcgcggctccagtgttgcaaagttaccgcatcccacaataccacaaatgccatagatctcaaatttctcaacctctaaaaaaaaatctgggaagtcgcttttgctaaaacgaagagattacctgactcgttggcggcgttgatgtccacctggagttcctcgaccaggtacacgcacatcgcggtcctcccgttgcgggcggcttggtgcagagccccagcgccgcggtccttcacggcctccaccgcctccttgaggcgtccttccccgccgtccagcctactagcaatccctgtcgaatcaatcccaaccccccaaatttccccaacccaaaatcagctcccgatcgcgagcaaccaaaacacgggaagtagaaggcagtggaggatcggggcccgtggagcgcgccgatcaatccgagccgcacgcactcttgaagaggcggaggtcaccgtcggcggccgcatggaggagcagccgctgcgtcgcgcctgggcctgcagggaggaggaggaggaacaattagcacgcggttaggtgaagctttgggggctagggtttaggggtgctcactgcacgcgtgaggcggcgccatggcagtgggggttttgggaggcgggaaggcaaaaccggggatcacgct
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| CDS seq | atgtgcgtgtacctggtcgaggaactccaggtggacatcaacgccgccaacgagtcaggtgctacgccactgatttatgcagttctgggtgggattgtgtatactgtgagttatcttcttgatcatggtgcaaatcctgataagcccaatgaacaagggcgtgctcctctccatttagcagttgaacaaggaaattgcgagatattaaaggtcttactagtgaaaggagctgatgttgattcatcttctgactgtgggacgccactgcatattgcagccgtgaaaagtcatgatggctgtatgaagattttattggaccaccatgcagattgtaataaggtattttccacattttatacacccctcatcgcggcgcttatggttcgctcattgaaatgtgtgaagcttctgattaaggctggtgctgatattaagggtgttggtacttttaccccCttaattgctgctgcaactgaaggcttaactgatttctataagtgcttactcgaggctggtgctgatcctaatgtgcctgatgaaaacagacggaaagatgtggagatcctacttccagtaacttctcgtattccatctgtgtatgattggagtgttgatgggataattacttatgtaaacaaaaatgtgcaggcgacgaatcttgaacctgaagatggaacttgtactcgaataggagcatttgcttggcttaagatgggtgaaggaatgaaagctttgacagatgctcacctctgcaggatgttgtgtcccgattggccaaaggcctgctacagggaaggggctgctcacatgactgataaggcttgcgatgcatttcttgatggtcttaaattggacccagcgaatatggagattgaaaatggtctacgggaggctttcaaatcattgaagaaatctcgtgctgcctga
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| Protein seq | MCVYLVEELQVDINAANESGATPLIYAVLGGIVYTVSYLLDHGANPDKPNEQGRAPLHLAVEQGNCEILKVLLVKGADVDSSSDCGTPLHIAAVKSHDGCMKILLDHHADCNKVFSTFYTPLIAALMVRSLKCVKLLIKAGADIKGVGTFTPLIAAATEGLTDFYKCLLEAGADPNVPDENRRKDVEILLPVTSRIPSVYDWSVDGIITYVNKNVQATNLEPEDGTCTRIGAFAWLKMGEGMKALTDAHLCRMLCPDWPKACYREGAAHMTDKACDAFLDGLKLDPANMEIENGLREAFKSLKKSRAA |
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| Function | Ankyrin-2 [UniProtKB/Swiss-Prot:Q8C8R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_02g0017380 | OsLaMu_02g0017380.01 | Chr02 | 18122868 | 18131325 | - | NAM | ||
| CDS seq | atgtgcgtgtacctggtcgaggaactccaggtggacatcaacgccgccaacgagtcaggtgctacgccactgatttatgcagttctgggtgggattgtgtatactgtgagttatcttcttgatcatggtgcaaatcctgataagcccaatgaacaagggcgtgctcctctccatttagcagttgaacaaggaaattgcgagatattaaaggtcttactagtgaaaggagctgatgttgattcatcttctgactgtgggacgccactgcatattgcagccgtgaaaagtcatgatggctgtatgaagattttattggaccaccatgcagattgtaataaggtattttccacattttatacacccctcatcgcggcgcttatggttcgctcattgaaatgtgtgaagcttctgattaaggctggtgctgatattaagggtgttggtacttttaccccCttaattgctgctgcaactgaaggcttaactgatttctataagtgcttactcgaggctggtgctgatcctaatgtgcctgatgaaaacagacggaaagatgtggagatcctacttccagtaacttctcgtattccatctgtgtatgattggagtgttgatgggataattacttatgtaaacaaaaatgtgcaggcgacgaatcttgaacctgaagatggaacttgtactcgaataggagcatttgcttggcttaagatgggtgaaggaatgaaagctttgacagatgctcacctctgcaggatgttgtgtcccgattggccaaaggcctgctacagggaaggggctgctcacatgactgataaggcttgcgatgcatttcttgatggtcttaaattggacccagcgaatatggagattgaaaatggtctacgggaggctttcaaatcattgaagaaatctcgtgctgcctga
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| Protein seq | MCVYLVEELQVDINAANESGATPLIYAVLGGIVYTVSYLLDHGANPDKPNEQGRAPLHLAVEQGNCEILKVLLVKGADVDSSSDCGTPLHIAAVKSHDGCMKILLDHHADCNKVFSTFYTPLIAALMVRSLKCVKLLIKAGADIKGVGTFTPLIAAATEGLTDFYKCLLEAGADPNVPDENRRKDVEILLPVTSRIPSVYDWSVDGIITYVNKNVQATNLEPEDGTCTRIGAFAWLKMGEGMKALTDAHLCRMLCPDWPKACYREGAAHMTDKACDAFLDGLKLDPANMEIENGLREAFKSLKKSRAA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_02g0492000 | SBH | 0.0 | 0.0 | 0.593666 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os02g29040 | SBH | 0.0 | 0.0 | 0.147777 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os02g0492000 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_02g0017660 | SBH | 0.0 | 0.0 | 0.803980 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0017790 | SBH | 0.0 | 0.0 | 0.485911 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_02g0017700 | SBH | 0.0 | 0.0 | 1.130409 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_02g0017570 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_02g0017460 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_02G0287100 | SBH | 0.9338285 | 11.2283085 | 51.320341 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_02g0017250 | RBH | 0.0 | 0.0 | 0.156560 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_02G0307300 | RBH | 0.001732 | 0.0149295 | 9.4468385 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_02g0017760 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_02g0017340 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_02g0017890 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_02g0017670 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_02g0017440 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_02G017830 | RBH | 0.0 | 0.0 | 0.000000 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_02g0017560 | SBH | 0.0 | 0.0 | 1.476809 |
