Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsLaMu_01g0014350 | OGI:01037640 | 15/16 | LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | Chr01:12535724-12540074 | ||||||||
| Gene Symbol | prx14 | ||||||||||
| DNA seq | atggccggtcagcgtgtggtggccgcggtggccgtcgctctgggcgtgtgcctgctgcagctgccggcggcgagccgcggccagctgcaggtggggttctacaacaccagctgccccaatgcggagacgctggtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatccgcctccatttccacgactgcttcgtcagagtatgtttccaagttttagttctagtttttgattcaaactagatcgtcagagaaagcggaagaattccgtggtgctattttcatctctgatttatatatttttttctactgtaaattatagggaaaaattcgacaggtgcaataatacaactaagTtttttttttctgccaaacatgatagcgaaatcttagaaagtcttaattaatccatcatcagctagtgaaccccagcacacacaagagaggcgtaaagtcctctcgaatagcagaaaagatcaaagtAaaaaaaaaaaagtgaaagctagctcacatcaagagttgagtcaaagaaagcatccagataaacaggatagaaaatgacattcgcatacatgttccgttattcttctacctgctgctcatcctccccaatattctccgctgcatttttctctttcgactttttcggtcctttacacgcagatctcgatgacacggaaacaataaatatttttaatcctttattcaaacacaacactcaaattgttataaaacaatttaacaatatttatattgtactctacgaaatcgtagatctaaacaacgcatacatcagggAaaaaaaagacaaatccaatgtattgataatacctagcactattcacacctgaatttatcttgtttttctcccgatgtgtaaattaagattagagttatttttagtggattgataaatgtcactactttacattctcaatttttttctaaaatttttcacaatcattcatattaaattcgatttaaaaaggcatgcagctggaccttcgaggtattagaatcaattgttgactatcgcatctcacgcatgttctctctggtcgatttcactgtgcaaatggtccagctagctaggatagttggcaacatatcctatgcacacaagccctcacgtgtacacaCgtgtacaccaactaaaaaatgtcaccaaaaaatctagaaaaaatcatacccatactttcaattgtattacacctagggttaaaatcttaacgtcaaattcattatattttagccgtaacAaaaaaaacaaaaaatctgacaattttaaggttgtaattttgtcagaattttatcttttttgttattctctatgtagaatgaatttgaagatgagactttgcacgtagatgtaatactattgaaagtacatgtatgaattttcctagaattttttgtgataatttttagttggtgtacacggtgtgtacacgcgagggcctgtgtgtataggatacgcacccagttaactgaattgtacagtactccctccttctaaagaataatttaatcctagttataaatctggatatgtaaccggaatttgtctttttttagacgaggacgtacgatcgtaggtaggaaacaggctattcatagttgaatctgttcagatagtgcatccatgcatggcaacctgaaattaatatggttgcttgtactcatgtccatgctcaattgttggcatctcgtctagattctggacagatttctgggagaaatcattacatggaggagatcgatgccagctagagatagtgacttgccaactaattcgctggacttttcctagaaaaaaacctaattcatcgccagacataaacgtgttcaacttgaacctttaattaagcccagcaagtcggaaaccgctggataaactacggggatacggctagtttttgtgagcaaaacagattacccacttcatagaatttgtactctctgttttctcggctttgctatttcacttcccatagatttttggtttctatctttcagtttttcgtccataagatattgcatcaagattcgtgttcttacaaattacactcacttgcatagcacttatacataattattatgtagcacttacagtgatcgggtacagtacaccaaaattagattttacaacattttctctctagatttatgatttttgatatgctatatcatttttagggttatttaatataaaacgggctatatcattagttaaaaattctatatgatttagagcgataaatctgtcgcacgattaatagttagttcattttttaacaaaaatttcaatatgtttagaccatgaaaacatgaaaacaccttttctccaaagaaatagccaaaatttaatgtaaaaaaaaatagaccaCcctacaaaaaaaactaccaacataatcattctctccactaaccactcctcccgggtgttcggtctcctcttgggcagtgcatgacacgatctcctcgcgcacggatcgggagcgaatgatctctcctagatgaggagaacaagaaaaccggggttagaaatttgaattattgagcgcataaggaacaattgcttgaatttaatttctcgacaaaaatctttaaattttaggaattcgatttattttgagattttgtcggtgattctcttttagcgatcacttctttcatctgcttgttggcttatcactcctaactaaaatttaaattttaaaattgattttgggttttatttttcttcctagtctattttgcagcatatgtatttaaattgcaaacaatacAaatatatAaaaaaaatctagttttggttgattacttcatatttttacaacttatgaaccgcgcctatctcaacctattcaattatattcttaccaaggtaaatgaagtctcatatcaccattttaaactagtaattaatagtattatttcttttttctttgtcgtttgcggctgtcagggttgcgacgcgtcggtgctgctgacgtcgCccaacaacacggcggagcgcgacgcggcgccgaacaaccccagcctccgcggcttccaggtgatcgacgccgccaaggccgctgttgagcagagctgcgcgcgcacggtgtcctgcgccgacatcgtcgcgttcgccgcccgcgacagcgtcaacctcactggcggcgtctcctaccaggtcccctccggccgccgcgacggcaacgtctccgttgcccaggacgccctcgacaacctcccccagcccaccttcaccgccgcccagctcgtcgccagcttcgccaacaagtcgCTctccgccgaggagatggtcgtcctctccggcgcccacaccgtcggccgctccttctgctcctccttcctcgcccgcatctggaacaacaccaCccccatcgtacgtacatagctcgccggcgacggcgacggcgaactcgatcgtcatttgacagggttttaaatctcccgctatagctgccgctatttcccgctatagctgtttgggaagggttctagctatttgctgttatgtacaatttagccactatagctccatttagcccactatagctcctgctatagctgtttgagaagctaaccgctaaatgttttagcccgctatttaaaacattgccatttgaccatttcaccattgacggcggctcacatggcggcggccggtgtgttcgatcgtgtgcaggtggacacggggctgagcccggggtacgcggcgctgctgagggcgctgtgcccgtcgaacgcgtcggcgacggcgacgacggcgatcgacgtgagcacgccggcgacgctggacaacaactactacaagctgctgccgctcaacctggggctcttcttctccgacaaccagttgcgggtgaacgcgacgctgggcgcgtcggcgagcagcttcgcggcgaacgagacgctgtggaaggagaagttcgtcgcagccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctcaactgcagcgtcgtcaacaaccggtcgtcctcctccgccgccgggatggcgacgccgtaccactactactccggatccaccgtgcccgtcgtcgacgaggccgcgtcgagctgatcgacgacgatgtacaacctgtttggtgttaattaggatgtgtgtatcccacgaggccacgacgatgtagaagccgggaagatcaaaacattaattctatgatgtctggaagaaaagcgtgtgtatgtaaaattttgattgttttttattattattctgtgatgaacaattgggcattggagattattggttttgttatttggaatt
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| CDS seq | atggccggtcagcgtgtggtggccgcggtggccgtcgctctgggcgtgtgcctgctgcagctgccggcggcgagccgcggccagctgcaggtggggttctacaacaccagctgccccaatgcggagacgctggtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatccgcctccatttccacgactgcttcgtcagagtggacacggggctgagcccggggtacgcggcgctgctgagggcgctgtgcccgtcgaacgcgtcggcgacggcgacgacggcgatcgacgtgagcacgccggcgacgctggacaacaactactacaagctgctgccgctcaacctggggctcttcttctccgacaaccagttgcgggtgaacgcgacgctgggcgcgtcggcgagcagcttcgcggcgaacgagacgctgtggaaggagaagttcgtcgcagccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctcaactgcagcgtcgtcaacaaccggtcgtcctcctccgccgccgggatggcgacgccgtaccactactactccggatccaccgtgcccgtcgtcgacgaggccgcgtcgagctga
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| Protein seq | MAGQRVVAAVAVALGVCLLQLPAASRGQLQVGFYNTSCPNAETLVRQAVTNAFANDSGIAAGLIRLHFHDCFVRVDTGLSPGYAALLRALCPSNASATATTAIDVSTPATLDNNYYKLLPLNLGLFFSDNQLRVNATLGASASSFAANETLWKEKFVAAMVKMGSIEVLTGSQGEVRLNCSVVNNRSSSSAAGMATPYHYYSGSTVPVVDEAASS |
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| Function | Peroxidase 1 [UniProtKB/Swiss-Prot:A5H8G4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_01g0014350 | OsLaMu_01g0014350.01 | Chr01 | 12535724 | 12540030 | + | NAM | ||
| CDS seq | atggccggtcagcgtgtggtggccgcggtggccgtcgctctgggcgtgtgcctgctgcagctgccggcggcgagccgcggccagctgcaggtggggttctacaacaccagctgccccaatgcggagacgctggtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatccgcctccatttccacgactgcttcgtcagagtggacacggggctgagcccggggtacgcggcgctgctgagggcgctgtgcccgtcgaacgcgtcggcgacggcgacgacggcgatcgacgtgagcacgccggcgacgctggacaacaactactacaagctgctgccgctcaacctggggctcttcttctccgacaaccagttgcgggtgaacgcgacgctgggcgcgtcggcgagcagcttcgcggcgaacgagacgctgtggaaggagaagttcgtcgcagccatggtcaagatggggagcatcgaggtgctcaccggcagccagggcgaggtcaggctcaactgcagcgtcgtcaacaaccggtcgtcctcctccgccgccgggatggcgacgccgtaccactactactccggatccaccgtgcccgtcgtcgacgaggccgcgtcgagctga
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| Protein seq | MAGQRVVAAVAVALGVCLLQLPAASRGQLQVGFYNTSCPNAETLVRQAVTNAFANDSGIAAGLIRLHFHDCFVRVDTGLSPGYAALLRALCPSNASATATTAIDVSTPATLDNNYYKLLPLNLGLFFSDNQLRVNATLGASASSFAANETLWKEKFVAAMVKMGSIEVLTGSQGEVRLNCSVVNNRSSSSAAGMATPYHYYSGSTVPVVDEAASS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsLaMu_01g0014350 | OsLaMu_01g0014350.02 | Chr01 | 12535870 | 12540074 | + | IsoSeq | ||
| CDS seq | ccaacgccttcgccaacgactccggcatcgccgccggcctcatccgcctccatttccacgactgcttcgtcagaggttgcgacgcgtcggtgc |
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| Protein seq | PTPSPTTPASPPASSASISTTASSEVATRRC |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| SE | Chr01 | 12535945 | 12539442 | + | OsLaMu_01g0014350.02 | OsLaMu_01g0014350.01,OsLaMu_01g0014350.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 6.108673 | None |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_01g0327000 | RBH | 0.108952 | 0.0 | 0.395443 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os01g22336 | RBH | 0.103383 | 0.0 | 0.092711 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os01g0327000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_01g0015030 | RBH | 0.0 | 8.939416 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_01g0014820 | RBH | 0.0 | 2.987240 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_01g0015060 | RBH | 0.0 | 7.159806 | 2.204557 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_01g0014530 | RBH | 0.0 | 0.484729 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_01g0014600 | RBH | 0.0 | 12.688881 | 1.210539 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_01G0208700 | RBH | 1.072067 | 2.9611 | 0.104659 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_01g0014520 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_01G0204900 | RBH | 0.7837265 | 0.558258 | 0.283679 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_01g0014540 | RBH | 0.0 | 0.000000 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_01g0013000 | SBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_01g0014530 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_01g0014640 | RBH | 0.0 | 0.881135 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_01g0014330 | SBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_01G014710 | RBH | 0.0 | 7.317316 | 0.265403 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_01g0014510 | RBH | 0.0 | 13.779379 | 0.829956 |
