Rice Gene Index (RGI): a comprehensive pan-genome database for comparative and functional genomics of Asian rice.

Basic Info

Gene ID		OGI # \| Score			Accession \| Assembly \| Annotation			Location		Links
OsLaMu_01g0001040		OGI:01002250 \| 16/16			LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)			Chr01:732205-761085		Homologues MicroCollinearity RGI-JBrowse
Gene Symbol		RLCK4, OsRLCK4, RLCK18, OsRLCK18, RLCK10, OsRLCK10, Os8Tak2, YK21, OsRLCK12, RLCK12
DNA seq		aaaaatttaagtactagcactttcagccataattcagtactactttctcatggtagaaaatacaactttatcatatgcaaaaataaatagcataccacaagatcacattttcttgctcctgctttatactctgttattccctaaaacaagataacttccaaatttcaacaatgccaagggaacatatctgtttacaacaatatgtagcctcagcgttttacaacttacttaccacctttcctatttggcatcaaagcacatgcacaagcttcactcatcctcctctgagatttcagttagttcagaggagaaacggcaagaatccactagcaatggcaggggttcatcatcgcagaagaatggccttgaagacagctgcagaccatcaacatcaccttcaagcatttctatgacctcactcatcgttggacgatcaggaggcttcatttgaatgcaatgtagaccaacaacacacaacttcttttccagctcatgcatattgaaggcattggcaatctcacccatcttttgttgaaccagctgattatacacccaagatggataatatgactggcttgagctcgacatatcctgcttagagttccttcgccctccagccatctccaacagaagcatcccaaagctataaacatcagatttgctagatatgacaccaaagctccgagatatcatctcaggagcaatataacctactgttcctcgtgcagcgctaactggcacaaaactgttatcctgtggatacagtttggcgaggccaaaatcggcaacttttgggacgaaattgctatcaagaaggatgttgtgcggcttgatatcaaaatgtagaatctgcatatcacacccctgatgtaagtagtttattcctctagcaatgcccaatgcgatctcattgagcttgtcccaagagagactcttgtcaggagagaagatgaacctgtcaagagatccatggggcatgtactcatacacaagtgctctcctcatttcctctgcacaataccccactagacgtactacattgacatgatggatactgccaatggtggatacctcgctgatgaattcttctccattacaattgtagttggccagcattttgatggcaacatggacatcaccaggcagtatcactcccttgaacacggatccatagccaccctggcccaacttgtctctaaaatggcttgtcattgcaatgatgtctgtataggcgtaccttgttggaccaagcattagctgcattcgtaaaaacttctcaactgcgtcgatttttattctagttttccaatacttgaaggcaaggaaggtcaatagtgtcaacggagctatcacgaacctgcataaaactgcataaaaaaacaagtttacataaacagtgataacctttagtaaatgtgtctttagacattggaacggtgcagtggtgattatgtactgtataattaagaagacagaatcgtagaagtaccagcaatccacttgaaaacaaacaaagcaaattgtacaatgaatccgccataaaattctatttttccacgaagcatccccatcatgtattgtggcatatcgaaataatctttcatgcccactcctctaattatgcaggaccagaaactaaagtcaataaaaagcatgtccacaatctgatccttgatggtttgattggacaatggttcttcatgaaatcccctgcaaggccgtgacatggtagagaaaagaatggcttagagagcgtaacaattgttttaagacaaatatgtactcaagtttatgtatgaatgcattctcgaaaaagtgtatgtatgaatgtaatggaacaacacccgaaactcaccgaatcgaccccatcagacaatccttgatgtgcccaatcctactccacctatgtattatgggaaaatgaacagcaaatccattcctcatggatctgacgatgtctgaaaagcttgcattatgtggcaatggcgagtcccaaccacccaagggaatcatggcaaggtagcgacatgaagtctcaaggtttctgatgattggaaaaacagatggaggcattatccaggaaccaaacacataaacaaacgaagagcttgtgctcaggcaatcaacaggaacgtacacactattgttccttactgcctgtgaacaattcacaaagctaacccatgtagctccaggtccagggtcaagggccaggtcccagccgccatgtgatccctggataccccccgaaacgaaaggaagctgatccgagcgaggaagagggcagctgctgtttgtatctttcaggctggcatccacaacccagaagacagaagtagtgtagttgatgctggttacatagtatgtccctgtgttgatcctaatggtagccttgctatcgctgcaatctaactcatatgacggaacaccgcacctttgtggatcacctcgccggcggaaaggatgggaaatgttctggagatgtccacaggagaaaggatagcacccttgccgcccctcgacatctcctgcaagagcaagaacagcaaagatgaaaacaaaggcttgcattgtggtagagaggggatgcatgctactcgctcagcccacaaggacaaggttggctaaccaagacaagtgcttatgttggctgctgcatatgatccgtgttccgtgattttgttgactaatccagaccatattgcaattagtcaatattaaattcttccacagtctctgatagagatggggcagggatggaccgaccgaagtatctgatagagtaaagccaaattcgtagtaccaaactttgactaactttcgctacaaaataggagtatatgattgattgccgccccccccccccccccccctgttattgtagcaaccggtgatcatacagccttcctgctctctctattctgtttgcagtcctcttcaccctaattttctatgcacctccggccgttgcagtacacacacagagagagagagagatgggtactgttctcgcaacagccttcctgctctctgttctcagccatggcacctactacatagccatggcttcttcatcttgggatgaccaagacttcttcaggcattgtccaccgtcccggtgcagcgacggtggaccagagatccggttccctcaccggctgcaatccagcaacacaccatcatcatgcgacagttcacacgccaagctaatatgctctggccaggacaccatcctacatcacccatttctgggcccttgcaaggtgactgccatagattacaagaaggctgtcatgaagatcatcccgtttgggggctcatcttctccatgcctgcttcacaagttcaattccacaaatctatcagctgatgtcaacgatcagaatcaattatacctcactgaacctgggagaatagtgcgttgttcaaaagagttcacaacaagtagagcttctatgatcgacggctacaaaactgttattgccgataaagttgtccgcttgatcccctgcctaagcgacaccacaagccacttctcatatttggtgtctacttggctgtacctgtatgcgcttccattggactgcatggtcgtctcaaaaggcaacattccaatccccagtccatacgctggtttaacgttcaagcaaatggcagaaaggataatcaactctgctgagatcactcttgatttgggtctcgggagcattccctacaattgcgtgcggtgtgaacggcaagggcaacactgcgcattcagctcacaaagaaatcaaacattctgcatgcatcacggtaccattctaacaatacccacccacacacatatagctttatttcctacaatagttaagctcttgcatttgatccacccatacagtactaccttttgaaacttctaggagatgagttgcaaaattattttgcaaactagtagtacaaaccatttgaatatgtgactgtaactatttaatcattctttacaattctcatagatatctcaaaaaagaagtggccaatggagaataatgtttgctcaactagcaacaatcagacacaatgattataaatttacatcttctcatagatatgcagctacaatcaacaccattgtactgctaatgaaaaggacccgaaagcaaaagtaacttaacttaagtaacaaaagactcctacaattagaaaatctaaaggttaagtaagcatacaacacaactaatcttacatgttctgatgataatcatgattctgctgtcttgagtacagaagactgcagttgatgatactgtgctgagcttttgcacaatcagatatacacacactaggagaagttatctatcacatatatatttgcataatcaaagtacagttgtaaccccaaaactaaaactctatgatatcccacagggtccatatttttctgcaatgtcgtaggtctatgctgggtttacattttttcaagagtaaatttctattttatctgtaaaccatcaaatagatcttattgtctgctttggtatttgcaggttcacgcgtcaaagtcattgcaggtactattgcaatccaaacatctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgacagcaggagttctgctggatatattaagaaggagaagcaaagtgttcgagcaatagtcgttattacatggctaaataagccaactggaggaaggcaggattaagcaaacctatctttttattcacaagaaaaaaatgaaataaacaaagttatctgtagcagataaaatagttgttgatggctgctctaactacattcttctgataaaaagacactgcgttcttttatacccatcaagataagccactcactatgggataattttctgccctgatgcaaaatgctgatttcttattctatttactcagcaacatcagtagctgcatttgttgctgtttcattggtggtggctactgtgctctatctctccctgaagcaaaggtata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gtggaacccaaaaaaccggccctcgatgacaaaggtagtcaacatgttaacggggaggttgcagaatctacaggtgccgcctaagccatttatttcgtctgaaaatcatcttgcgatgtagatcatgagaccgcatcgccatggtttggactttggagaccagcaaagcaataggagcttggccagcatttcctataaaaggcatcaccatggtttggtgcctgagtgagagatatgcttaatccacatatcataaaatagttcttagtgagctgaagtctgcacatatagtgtttgactattaaactaaactgggcaatcaggtatatgatatatcaccatgtactcatgtaaattgcaatactgtaatactgtcttttaaccaaacctgtaatactgtctcatttctattaatggaaatggggggagcaatggtctcctagttcaaaaaaaaaaatgatatatcaccatgtactcatgtaatttgcaacatatctcaatggatttaatttgcaatataataatagctggaagatgacaactaaattaccttattattccatcgttgatgcttgtccactaatcatccttgctgaacaccacagtaaggtgtggtatttgccctcctatcccttcagcacaagagatcgattccgcagtgtaactaatcatgtcatatttactcccagtgctgcattttctttacaaggttaaaaaaaaagtgctgcatcatccagaagtggaaaaaaaattaaaaataacaaaggaagaaagctaagaaaagggattattaccaaggcagcgaggctctggatggacatggactaataatgtgggagacggaggtggtgtgagggacgtgagaagacgataccattgaagacatcgggcttagtagattcgaccggatctttgccggccgtcagcgccaccattgaagacacggtagcaataacagatggcgcgatggcgaggcttggtctcgcatataccgggaggaaacgacaccttacccatctgtcgacggaggcgaaaagcggcggcggaggcagaccgccgcattaaccggagctctcgccgggaagagtggtgggggacggaggaagaagaaggtgatgattttcttttttttttcttttttctttgagggacaaggggatgattgctcggccacaggccggttaggatggcccatctaaggccttgcttcgatggcccacctaatcccccgcggcccatgaacaatggattgatcggacggttcacatgtggcccaattcacgagcaaatataatgctcaactcaccagcagcatgtactcaggaatcataattggcgcgtacgcgccggcccacacagcccgtgtctcatctactagtactattaagtgttaacgtaactagttaattaaggataataacgataattaagaaaatattcttttcctttttgagatattttttactaatagattgaaaaaatttaagttacatctgaaaagttttgacttacgatttaattttttaagtcaaattttgaaaactttcaactcaaactttgaaattttcaatttgcaagaaaatttttgaaaactttcaactccgacttgaaaactgctaactcagattcgaaaatcttcaacttagatttgaaaactttcaaatcaaatttgaaatttttaacttgagatttgaaaacatgtgtattgaagattaaaaaataatAaaaaaaaAGCTTAAAATGGGAAAGGAAGAAATGCAAAAAAAAAAACGACGaaaGaaaaaaaaaggggcggggcggacggccagctcgtgccgactagcaacttctccaattactgtagcacgtaattaacgctaattgccgtgattagtgatgggatcagcgcaacggattcgtcctgcagcccagtacgcgcgagttactgtagcagcacgtacgcgcgagttagcagtgcccgcatgtactccctccatttcagattataggacgttttgactttggttaaagtcaaactgctttaaatttgattaattttatttataaaaaatagaaagattttcaagccaagaaaaatttattatgaaaatatattcaattattgatttgatgaaacaaatttagtattataaatattactatatttgtatataaacttagtcaaacttaaaacagtttaactttaactaaagtcaaaacgtcttataacctgaaacggagggagtatttcatacatggaaaaaaaggtttaagcattagtaaatatcaattgttggatccatgaatatggaataataacaaccattatttatgaagggagaatagctactttaatccctaaagtttctctgtaggataagtttagtccctaacattttaaatggtccaaagaaatccttaaactttgtcataaggcctagaatagtccttgggtccaccaaaatcattatatgaatatgccatgtcatcattcatgcaaaatctatgatgaattgtccaatttacccttacgtatatcctagaaaaataaatataagggtgaattagacataaccataggaaaaaaaatgcttctcctttttttcactcttctgaggtatatttttactcttacatataccatatattttttaaaactttttccttttgttttttatttttttatgatacatgtaagggtaaattggacaaatcatatagattttgcataggaaggtgacatggcatgtcaatgtggcaattttggtgggaccaaggactatatcagcccatatgacaaatttaaaggacttgtttggacaatatgaaagattaaggactaaaatgacccaggagtgaaactttagggaccatattggctattctccccatttatgaacactaattgctagcttgatcagggtttcccttaccgccggtaaccgcgcggttaccgcggttaccgggcttaccgtggaggtacggtaatataaataccgcggtaacctcctcaaattcaaataaatttaaaaaataatttgaatttttaataaattttgcacggttttgtacggtttttcataaccgtgcttaccgccggggcatggtaaccccggccccggcggtttgggaaaccctgagctagatacatcatttttgcctagctactagctaattattcagctactccatcatcctcttctgagattgcagtaagctcggaggagtgaaggtaagaatccatgacttgtgaaggtggtatgctatccccatcgcagaaaaatggcctcggaggcacttgcaacgcatccacatccccttcgagcatctctattgcctcgctcatcgtcggccgatcatgtgatttcatctgaatgcaccacagcccaacaaggcatagcttcctctccaactcatgcatgttagcaacagtggatatctcatcaacttgttgatctgctatcaactggtcatacacccatgctgggtagtatgccctacttgcatttgagtttgcatttggatctgcattccttctacctccagccatctcaagcaacaacatttcaaagctataaacatcggacttgctggatatgacgccaaaacaacgtgacaccatctcaggagctatgtatcccactgttccccgtaaagccctatctgacacaaagctcttgtcccttgggtacagttttgcgaggccgaaatcagcaacctttggaaaaaagttatcatcaagaaggatgttgtgtggcttaatgtcaaagtgtagaatctgcatatcacatccttggtgtaggtacttgatccctctagcaatgcccagagcaatctcattgagcttgtcccatgagaaactcctctcggatgagaagatgtacttgtctagagatcctctaggcat More
CDS seq		atgctgaagctagaaatattaactgtcatttatgtcttgtgcgtgcttgcggatcttgtcccagatgcaggtgggcggcggcatcatcagattcagattcagcctgcgtgtcctacgttcacctgtggcgcccatctcaggaacgtgtcgtacccgttccgccggcgaggtgacccgccggagtgcggcgttgcatcgtacgagctgacttgcaccgacgacaaggctattattcagatcgacaacggaacgtaccttgtgaggggcatcaactgcaccgatgctaccttcagtgtcgtggacgccaacatgttggattcaagtaacagtacttgccctcttcctcgctggaatcgcattccttattattaccgaaggtacggggttgtcgaagactcaagccgcaacatcgtccaagagctggcgccatcttattcgatcataaccgctgcttttgtgacttgttcgcgggaagtaacgaacaatgggatgtacatgcctgtcgcttgcttaagcaccaacagctccttcgtttacgtgctaactggctggttcgctgatttttatatcaagaatctcgagccttcttgtgggtacctggccatgactcctttgagcattggcggcctaccagtaagagcattgaatgcaagctatgcggatgttgtcaaacttatgagaggtggattcgccattcagtttccttacaaaattgatcgtttcgactactgcaagttgaaagacttcatggcacaatcatttcaaaaaatcagtaaggaacgatcaacatcttccaggatttacggcactgtgatacttgactatcaattctgggcctgcgtattatataatcctcgagctagattatctatatctgcactgttcgagggaacaacaccaatagccatgtggtttttgaagttcattttggcgcccttagtagtattgacctttctggtgcacaagtattggaagaggaggatgataatcgatgcagtcgagaagtttctccggatgcaactgatgattggtccgacgaggtatgcctacactgacatcactgcaatcacagggcatttcagggagaagctcggccaaggaggctatggctctgtatataaaggtgttctactcccaggcaatgtccatgtggctgtcaaggtgctgggaaactccaattgtaatggagaagagttcatcagtgaagtctccaccattggcaggattcaccatgtcaatgtggttcgtttagtagggttttgtgcagaggaaatgaggagggcactggtgtacgagcacatgcctaatggatctctcgacaagttcatcttttcacatgacatgagattttcctgggacaagctcaacgagatcgcattgggcattgccagaggaataaactatttgcatcaggggtgtgagatgcagattctacattttgatatcaagccgcacaacatccttcttgacagcaatttcattccaaaagttgctgattttggccttgccaaactgtacccacgggataatagttttgtgcctgttagcgctgcacgaggaacaataggttatattgctcctgagatgatatctcggagctttggtgccatatctagcaaatctgacgtgtatagctttggaatgcttctgttggagatggttggagggcgaaggaactctaagcaggatatgtcgagctcaagccaagcgtattatccatcatgggtgtataatcagctggttcaacaagagttgggtgagatggtcactgcctttaatatgcatgagttggaaaagaagttgtgcattgttgggctacattgcattcagatgaagtctcatgatcggccaacaatgagtgaggtcattgagatgcttgacggtggtgctgatggtctgcgattgccttctaggccatttttctgtgatgacgagactatgccacatttggtgggttcttaccatttatcctctgggctaactgaaatctcggaggaggatgacatgcatcccctctctaccacaatgcaagcctttgttttcatctttgctgttcttgctcttgcaggagatgtcgaggggcggcaagggtgctatcctttctcctgtggacatctccagaacatttcccatcctttccgccggcgaggtgatccacaaaggtgcggtgttccgtcatatgagttagattgcagcgatagcaaggctaccattaggatcaacacagggacatactatgtaaccagcatcaactacactacttctgtcttctgggttgtggatgccagcctgaaagatacaaacagcagctgccctcttcctcgctcggatcagcttcctttcgtttcggggggtatccagggatcacatggcggctgggacctggcccttgaccctggacctggagctacatgggttagctttgtgaattgttcacaggcagtaaggaacaatagtgtgtacgttcctgttgattgcctgagcacaagctcttcgtttgtttatgtgtttggttcctggataatgcctccatctgtttttccaatcatcagaaaccttgagacttcatgtcgctaccttgccatgattcccttgggtggttgggactcgccattgccacataatgcaagcttttcagacatcgtcagatccatgaggaatggatttgctgttcattttcccataatacataggtggagtaggattgggcacatcaaggattgtctgatggggtcgattcggggatttcatgaagaaccattgtccaatcaaaccatcaaggatcagattgtggacatgctttttattgactttagtttctggtcctgcataattagaggagtgggcatgaaagattatttcgatatgccacaatacatgatggggatgcttcgtggaaaaatagaattttatggcggattcattgtacaatttgctttgtttgttttcaagttcgtgatagctccgttgacactattgaccttccttgccttcaagtattggaaaactagaataaaaatcgacgcagttgagaagtttttacgaatgcagctaatgcttggtccaacaaggtacgcctatacagacatcattgcaatgacaagccattttagagacaagttgggccagggtggctatggatccgtgttcaagggagtgatactgcctggtgatgtccatgttgccatcaaaatgctggccaactacaattgtaatggagaagaattcatcagcgaggtatccaccattggcagtatccatcatgtcaatgtagtacgtctagtggggtattgtgcagaggaaatgaggagagcacttgtgtatgagtacatgccccatggatctcttgacaggttcatcttctctcctgacaagagtctctcttgggacaagctcaatgagatcgcattgggcattgctagaggaataaactacttacatcaggggtgtgatatgcagattctacattttgatatcaagccgcacaacatccttcttgatagcaatttcgtcccaaaagttgccgattttggcctcgccaaactgtatccacaggataacagttttgtgccagttagcgctgcacgaggaacagtaggttatattgctcctgagatgatatctcggagctttggtgtcatatctagcaaatctgatgtttatagctttgggatgcttctgttggagatggctggagggcgaaggaactctaagcaggatatgtcgagctcaagccagtcatattatccatcttgggtgtataatcagctggttcaacaaaagatgggtgagattgccaatgccttcaatatgcatgagctggaaaagaagttgtgtgttgttggtctacattgcattcaaatgaagcctcctgatcgtccaacgatgagtgaggtcatagaaatgcttgaaggtgatgttgatggtctgcagctgtcttcaaggccattcttctgcgatgatgaacccctgccattgctagtggattcttgccgtttctcctctgaactaactgaaatctcagaggaggatgagtga More
Protein seq		MLKLEILTVIYVLCVLADLVPDAGGRRHHQIQIQPACPTFTCGAHLRNVSYPFRRRGDPPECGVASYELTCTDDKAIIQIDNGTYLVRGINCTDATFSVVDANMLDSSNSTCPLPRWNRIPYYYRRYGVVEDSSRNIVQELAPSYSIITAAFVTCSREVTNNGMYMPVACLSTNSSFVYVLTGWFADFYIKNLEPSCGYLAMTPLSIGGLPVRALNASYADVVKLMRGGFAIQFPYKIDRFDYCKLKDFMAQSFQKISKERSTSSRIYGTVILDYQFWACVLYNPRARLSISALFEGTTPIAMWFLKFILAPLVVLTFLVHKYWKRRMIIDAVEKFLRMQLMIGPTRYAYTDITAITGHFREKLGQGGYGSVYKGVLLPGNVHVAVKVLGNSNCNGEEFISEVSTIGRIHHVNVVRLVGFCAEEMRRALVYEHMPNGSLDKFIFSHDMRFSWDKLNEIALGIARGINYLHQGCEMQILHFDIKPHNILLDSNFIPKVADFGLAKLYPRDNSFVPVSAARGTIGYIAPEMISRSFGAISSKSDVYSFGMLLLEMVGGRRNSKQDMSSSSQAYYPSWVYNQLVQQELGEMVTAFNMHELEKKLCIVGLHCIQMKSHDRPTMSEVIEMLDGGADGLRLPSRPFFCDDETMPHLVGSYHLSSGLTEISEEDDMHPLSTTMQAFVFIFAVLALAGDVEGRQGCYPFSCGHLQNISHPFRRRGDPQRCGVPSYELDCSDSKATIRINTGTYYVTSINYTTSVFWVVDASLKDTNSSCPLPRSDQLPFVSGGIQGSHGGWDLALDPGPGATWVSFVNCSQAVRNNSVYVPVDCLSTSSSFVYVFGSWIMPPSVFPIIRNLETSCRYLAMIPLGGWDSPLPHNASFSDIVRSMRNGFAVHFPIIHRWSRIGHIKDCLMGSIRGFHEEPLSNQTIKDQIVDMLFIDFSFWSCIIRGVGMKDYFDMPQYMMGMLRGKIEFYGGFIVQFALFVFKFVIAPLTLLTFLAFKYWKTRIKIDAVEKFLRMQLMLGPTRYAYTDIIAMTSHFRDKLGQGGYGSVFKGVILPGDVHVAIKMLANYNCNGEEFISEVSTIGSIHHVNVVRLVGYCAEEMRRALVYEYMPHGSLDRFIFSPDKSLSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDSNFVPKVADFGLAKLYPQDNSFVPVSAARGTVGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSKQDMSSSSQSYYPSWVYNQLVQQKMGEIANAFNMHELEKKLCVVGLHCIQMKPPDRPTMSEVIEMLEGDVDGLQLSSRPFFCDDEPLPLLVDSCRFSSELTEISEEDE
Function		Rust resistance kinase Lr10 [UniProtKB/Swiss-Prot:P93604]

Transcripts

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsLaMu_01g0001040	OsLaMu_01g0001040.02	Chr01	732205	750726	-	NAM
CDS seq	atgctgaagctagaaatattaactgtcatttatgtcttgtgcgtgcttgcggatcttgtcccagatgcaggtgggcggcggcatcatcagattcagattcagcctgcgtgtcctacgttcacctgtggcgcccatctcaggaacgtgtcgtacccgttccgccggcgaggtgacccgccggagtgcggcgttgcatcgtacgagctgacttgcaccgacgacaaggctattattcagatcgacaacggaacgtaccttgtgaggggcatcaactgcaccgatgctaccttcagtgtcgtggacgccaacatgttggattcaagtaacagtacttgccctcttcctcgctggaatcgcattccttattattaccgaaggtacggggttgtcgaagactcaagccgcaacatcgtccaagagctggcgccatcttattcgatcataaccgctgcttttgtgacttgttcgcgggaagtaacgaacaatgggatgtacatgcctgtcgcttgcttaagcaccaacagctccttcgtttacgtgctaactggctggttcgctgatttttatatcaagaatctcgagccttcttgtgggtacctggccatgactcctttgagcattggcggcctaccagtaagagcattgaatgcaagctatgcggatgttgtcaaacttatgagaggtggattcgccattcagtttccttacaaaattgatcgtttcgactactgcaagttgaaagacttcatggcacaatcatttcaaaaaatcagtaaggaacgatcaacatcttccaggatttacggcactgtgatacttgactatcaattctgggcctgcgtattatataatcctcgagctagattatctatatctgcactgttcgagggaacaacaccaatagccatgtggtttttgaagttcattttggcgcccttagtagtattgacctttctggtgcacaagtattggaagaggaggatgataatcgatgcagtcgagaagtttctccggatgcaactgatgattggtccgacgaggtatgcctacactgacatcactgcaatcacagggcatttcagggagaagctcggccaaggaggctatggctctgtatataaaggtgttctactcccaggcaatgtccatgtggctgtcaaggtgctgggaaactccaattgtaatggagaagagttcatcagtgaagtctccaccattggcaggattcaccatgtcaatgtggttcgtttagtagggttttgtgcagaggaaatgaggagggcactggtgtacgagcacatgcctaatggatctctcgacaagttcatcttttcacatgacatgagattttcctgggacaagctcaacgagatcgcattgggcattgccagaggaataaactatttgcatcaggggtgtgagatgcagattctacattttgatatcaagccgcacaacatccttcttgacagcaatttcattccaaaagttgctgattttggccttgccaaactgtacccacgggataatagttttgtgcctgttagcgctgcacgaggaacaataggttatattgctcctgagatgatatctcggagctttggtgccatatctagcaaatctgacgtgtatagctttggaatgcttctgttggagatggttggagggcgaaggaactctaagcaggatatgtcgagctcaagccaagcgtattatccatcatgggtgtataatcagctggttcaacaagagttgggtgagatggtcactgcctttaatatgcatgagttggaaaagaagttgtgcattgttgggctacattgcattcagatgaagtctcatgatcggccaacaatgagtgaggtcattgagatgcttgacggtggtgctgatggtctgcgattgccttctaggccatttttctgtgatgacgagactatgccacatttggtgggttcttaccatttatcctctgggctaactgaaatctcggaggaggatgacatgcatcccctctctaccacaatgcaagcctttgttttcatctttgctgttcttgctcttgcaggagatgtcgaggggcggcaagggtgctatcctttctcctgtggacatctccagaacatttcccatcctttccgccggcgaggtgatccacaaaggtgcggtgttccgtcatatgagttagattgcagcgatagcaaggctaccattaggatcaacacagggacatactatgtaaccagcatcaactacactacttctgtcttctgggttgtggatgccagcctgaaagatacaaacagcagctgccctcttcctcgctcggatcagcttcctttcgtttcggggggtatccagggatcacatggcggctgggacctggcccttgaccctggacctggagctacatgggttagctttgtgaattgttcacaggcagtaaggaacaatagtgtgtacgttcctgttgattgcctgagcacaagctcttcgtttgtttatgtgtttggttcctggataatgcctccatctgtttttccaatcatcagaaaccttgagacttcatgtcgctaccttgccatgattcccttgggtggttgggactcgccattgccacataatgcaagcttttcagacatcgtcagatccatgaggaatggatttgctgttcattttcccataatacataggtggagtaggattgggcacatcaaggattgtctgatggggtcgattcggggatttcatgaagaaccattgtccaatcaaaccatcaaggatcagattgtggacatgctttttattgactttagtttctggtcctgcataattagaggagtgggcatgaaagattatttcgatatgccacaatacatgatggggatgcttcgtggaaaaatagaattttatggcggattcattgtacaatttgctttgtttgttttcaagttcgtgatagctccgttgacactattgaccttccttgccttcaagtattggaaaactagaataaaaatcgacgcagttgagaagtttttacgaatgcagctaatgcttggtccaacaaggtacgcctatacagacatcattgcaatgacaagccattttagagacaagttgggccagggtggctatggatccgtgttcaagggagtgatactgcctggtgatgtccatgttgccatcaaaatgctggccaactacaattgtaatggagaagaattcatcagcgaggtatccaccattggcagtatccatcatgtcaatgtagtacgtctagtggggtattgtgcagaggaaatgaggagagcacttgtgtatgagtacatgccccatggatctcttgacaggttcatcttctctcctgacaagagtctctcttgggacaagctcaatgagatcgcattgggcattgctagaggaataaactacttacatcaggggtgtgatatgcagattctacattttgatatcaagccgcacaacatccttcttgatagcaatttcgtcccaaaagttgccgattttggcctcgccaaactgtatccacaggataacagttttgtgccagttagcgctgcacgaggaacagtaggttatattgctcctgagatgatatctcggagctttggtgtcatatctagcaaatctgatgtttatagctttgggatgcttctgttggagatggctggagggcgaaggaactctaagcaggatatgtcgagctcaagccagtcatattatccatcttgggtgtataatcagctggttcaacaaaagatgggtgagattgccaatgccttcaatatgcatgagctggaaaagaagttgtgtgttgttggtctacattgcattcaaatgaagcctcctgatcgtccaacgatgagtgaggtcatagaaatgcttgaaggtgatgttgatggtctgcagctgtcttcaaggccattcttctgcgatgatgaacccctgccattgctagtggattcttgccgtttctcctctgaactaactgaaatctcagaggaggatgagtga More
Protein seq	MLKLEILTVIYVLCVLADLVPDAGGRRHHQIQIQPACPTFTCGAHLRNVSYPFRRRGDPPECGVASYELTCTDDKAIIQIDNGTYLVRGINCTDATFSVVDANMLDSSNSTCPLPRWNRIPYYYRRYGVVEDSSRNIVQELAPSYSIITAAFVTCSREVTNNGMYMPVACLSTNSSFVYVLTGWFADFYIKNLEPSCGYLAMTPLSIGGLPVRALNASYADVVKLMRGGFAIQFPYKIDRFDYCKLKDFMAQSFQKISKERSTSSRIYGTVILDYQFWACVLYNPRARLSISALFEGTTPIAMWFLKFILAPLVVLTFLVHKYWKRRMIIDAVEKFLRMQLMIGPTRYAYTDITAITGHFREKLGQGGYGSVYKGVLLPGNVHVAVKVLGNSNCNGEEFISEVSTIGRIHHVNVVRLVGFCAEEMRRALVYEHMPNGSLDKFIFSHDMRFSWDKLNEIALGIARGINYLHQGCEMQILHFDIKPHNILLDSNFIPKVADFGLAKLYPRDNSFVPVSAARGTIGYIAPEMISRSFGAISSKSDVYSFGMLLLEMVGGRRNSKQDMSSSSQAYYPSWVYNQLVQQELGEMVTAFNMHELEKKLCIVGLHCIQMKSHDRPTMSEVIEMLDGGADGLRLPSRPFFCDDETMPHLVGSYHLSSGLTEISEEDDMHPLSTTMQAFVFIFAVLALAGDVEGRQGCYPFSCGHLQNISHPFRRRGDPQRCGVPSYELDCSDSKATIRINTGTYYVTSINYTTSVFWVVDASLKDTNSSCPLPRSDQLPFVSGGIQGSHGGWDLALDPGPGATWVSFVNCSQAVRNNSVYVPVDCLSTSSSFVYVFGSWIMPPSVFPIIRNLETSCRYLAMIPLGGWDSPLPHNASFSDIVRSMRNGFAVHFPIIHRWSRIGHIKDCLMGSIRGFHEEPLSNQTIKDQIVDMLFIDFSFWSCIIRGVGMKDYFDMPQYMMGMLRGKIEFYGGFIVQFALFVFKFVIAPLTLLTFLAFKYWKTRIKIDAVEKFLRMQLMLGPTRYAYTDIIAMTSHFRDKLGQGGYGSVFKGVILPGDVHVAIKMLANYNCNGEEFISEVSTIGSIHHVNVVRLVGYCAEEMRRALVYEYMPHGSLDRFIFSPDKSLSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDSNFVPKVADFGLAKLYPQDNSFVPVSAARGTVGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSKQDMSSSSQSYYPSWVYNQLVQQKMGEIANAFNMHELEKKLCVVGLHCIQMKPPDRPTMSEVIEMLEGDVDGLQLSSRPFFCDDEPLPLLVDSCRFSSELTEISEEDE More

Gene	Transcript	Chromosome	Start	End	Strand	Source
OsLaMu_01g0001040	OsLaMu_01g0001040.01	Chr01	750579	761085	-	NAM
CDS seq	atgcctagaggatctctagacaagtacatcttctcatccgagaggagtttctcatgggacaagctcaatgagattgctctgggcattgctagagggatcaagtacctacaccaaggatgtgatatgcagattctacactttgacattaagccacacaacatccttcttgatgataacttttttccaaaggttgctgatttcggcctcgcaaaactgtacccaagggacaagagctttgtgtcagatagggctttacggggaacagtgggatacatagctcctgagatggtgtcacgttgttttggcgtcatatccagcaagtccgatgtttatagctttgaaatgttgttgcttgagatggctggaggtagaaggaatgcagatccaaatgcaaactcaaatgcaagtagggcatactacccagcatgggtgtatgaccagttgatagcagatcaacaagttgatgagatatccactgttgctaacatgcatgagttggagaggaagctatgccttgttgggctgtggtgcattcagatgaaatcacatgatcggccgacgatgagcgaggcaatagagatgctcgaaggggatgtggatgcgttgcaagtgcctccgaggccatttttctgcgatggggatagcataccaccttcacaatggacaagcatcaacgatggaataataaggaaccaagaacagggtgatccaggatggtgtcttgtccagagcatgataattgcatgccaggtgcgccgcatgatggaggttgtgtcgaaagacggaacggatgctgcaggtggccggcggcatcatcggcgccatgactgcccttcgttcacatgcggccatatcagtgacgtgtcgttcccgttccgccggcgaggtgacccgccggagtgcggtgttcaatcctacgagctaacttgtgcagacgacaaggctacaattcagatcgacaaggagacatactctgtaagtgacatcaactatggtgattctaccttgtgggtcgtcgatgccagcttcttggattcacgtagcagttgccttcttcctcgctggaacccccttcttcgtgagcccaggctccaggccaagtcacaccacatcattgaattggcacctccagtaggggttacctgggctagctttgtcaattgttcgcaggaaataaggaacagcagttggatgtacatgcccgtcgcttgcctgagcaccagcagatccttcatttacgtgtttactggccaacaatctgcttatattcagaaccttgagccttcctgtgggtacctggccacgactcctttgggtggcagcaagttgaacagcacgtcggcgctgcagaatgtaagctatcaggatgttgtaaagctaatgatgactggatttgccgttcgatttcctttcacagttagtgggtggaacttcaaagaatgcctggcactgtcaatccgccagacacgtaaagggagcaaggaaagggtttcgaatattgctatcattgacttctctttctggtcgtgcttcctgcttggagatagatcacatgataacctcatctacatgtacatggtggtcgacacagtttcaatagccctactgattttgaagtggactgctgtactgtgcagattcgtattggccccattagcagtattcatcttccttgcccacaagtattggagaaataagataacaattgatgcagtagagaagttcctccagatgcaactaactctcggcccaacaaggtatgcctacactgacctcactgcaattacaggtcacttcggtgagaagcttggccaaggaggctacggctcggtatacaaaggtgttctcccaggttatgttaatgtggccgtcaaggtgctgggaaactctaactgcaacggtgaagaattcattagtgaggtctccaccattggtaggatccaccacgtcaatgtagtttgtcttgttggtttttgttcagaggaaatgaggagggcacttgtgtacgagtacatgccacgaggatccctagacaagtacattttctcatccaagagaagtttctcctgggacaagctcaatgagatagctttgggtattgctagggggatcaactaccttcatcagggttgcgatatgcagatactgcactttgacatcaagccacacaacatccttcttgatgataactttgttccaaaggttgctgatttcggcctcgctaaactgtacccaagggacaacagttttgtgccgctcaacgccttaaggggaacaataggttatattgctcctgaaatgatatctcggagctttggcgttatatcaagcaaatccgatgtctacagctttggaatgctgctgctggagatggctggaggaagaaggaactcagacatgcgtgcagataactcaagtcaggcctactacccgtcgtgggtgtatgaccggctaatagaacaacagatgaagtctcacgatcggccgacgatgagcgaggtcatagagatgcttgaaggtggcgttgttggcctgcagatgcctccaagaccattcttctgtgatgatgaatccatgtcagctatgatggattcttaccaattctcctctgggctaactgaaattttagaggaggatgagtga More
Protein seq	MPRGSLDKYIFSSERSFSWDKLNEIALGIARGIKYLHQGCDMQILHFDIKPHNILLDDNFFPKVADFGLAKLYPRDKSFVSDRALRGTVGYIAPEMVSRCFGVISSKSDVYSFEMLLLEMAGGRRNADPNANSNASRAYYPAWVYDQLIADQQVDEISTVANMHELERKLCLVGLWCIQMKSHDRPTMSEAIEMLEGDVDALQVPPRPFFCDGDSIPPSQWTSINDGIIRNQEQGDPGWCLVQSMIIACQVRRMMEVVSKDGTDAAGGRRHHRRHDCPSFTCGHISDVSFPFRRRGDPPECGVQSYELTCADDKATIQIDKETYSVSDINYGDSTLWVVDASFLDSRSSCLLPRWNPLLREPRLQAKSHHIIELAPPVGVTWASFVNCSQEIRNSSWMYMPVACLSTSRSFIYVFTGQQSAYIQNLEPSCGYLATTPLGGSKLNSTSALQNVSYQDVVKLMMTGFAVRFPFTVSGWNFKECLALSIRQTRKGSKERVSNIAIIDFSFWSCFLLGDRSHDNLIYMYMVVDTVSIALLILKWTAVLCRFVLAPLAVFIFLAHKYWRNKITIDAVEKFLQMQLTLGPTRYAYTDLTAITGHFGEKLGQGGYGSVYKGVLPGYVNVAVKVLGNSNCNGEEFISEVSTIGRIHHVNVVCLVGFCSEEMRRALVYEYMPRGSLDKYIFSSKRSFSWDKLNEIALGIARGINYLHQGCDMQILHFDIKPHNILLDDNFVPKVADFGLAKLYPRDNSFVPLNALRGTIGYIAPEMISRSFGVISSKSDVYSFGMLLLEMAGGRRNSDMRADNSSQAYYPSWVYDRLIEQQMKSHDRPTMSEVIEMLEGGVVGLQMPPRPFFCDDESMSAMMDSYQFSSGLTEILEEDE More

Event Type

Chromosome

Start

End

Strand

Alternative mRNAs

Total mRNAs

Source

Expression

	Leaf	Root	Panicle
FPKM	0.141453	0.000000	None

Homologues

Genome & Annotation	Homologs	Type	Expression(FPKM)
Genome & Annotation	Homologs	Type	Leaf	Root	Panicle
Nipponbare \| IRGSP 1.0 \| Gramene(+IsoSeq)	OsNip_01g0117400	RBH	0.000000	0.000000	0.000000
Nipponbare \| IRGSP 1.0 \| MSU	LOC_Os01g02350	RBH	0.410104	0.604183	0.203183
Nipponbare \| IRGSP 1.0 \| RAP-db	Os01g0115500	RBH	None	None	None
Azucena \| AzucenaRS1 \| Gramene(+IsoSeq)	OsAzu_01g0001150	SBH	0.000000	0.0	0.0
KETAN NANGKA \| Os128077RS1 \| Gramene(+IsoSeq)	OsKeNa_01g0001050	RBH	0.096337	0.0	0.738217
CHAO MEO \| Os132278RS1 \| Gramene(+IsoSeq)	OsCMeo_01g0001070	RBH	0.000000	3.833264	4.844249
ARC 10497 \| Os117425RS1 \| Gramene(+IsoSeq)	OsARC_01g0001050	SBH	0.000000	0.000000	None
PR 106 \| Os127742RS1 \| Gramene(+IsoSeq)	OsPr106_01g0001090	RBH	1.662119	6.739368	0.981561
Minghui 63 \| MH63RS3 \| HZAU	OsMH63_01G0014900	SBH	0	0	0
IR 64 \| OsIR64RS1 \| Gramene(+IsoSeq)	OsIR64_01g0001050	RBH	0.037199	0.353644	0.989798
Zhenshan 97 \| ZS97RS3 \| HZAU	OsZS97_01G0013500	RBH	1.5207765	5.919698	8.6960745
LIMA \| Os127564RS1 \| Gramene(+IsoSeq)	OsLima_01g0001110	SBH	0.0	0.0	None
KHAO YAI GUANG \| Os127518RS1 \| Gramene(+IsoSeq)	OsKYG_01g0001070	RBH	0.068603	2.280034	None
GOBOL SAIL \| Os132424RS1 \| Gramene(+IsoSeq)	OsGoSa_01g0001130	SBH	0.287462	2.850632	None
LIU XU \| Os125827RS1 \| Gramene(+IsoSeq)	OsLiXu_01g0001250	RBH	0.333055	0.141762	0.0
LARHA MUGAD \| Os125619RS1 \| Gramene(+IsoSeq)	OsLaMu_01g0001260	SBH	0.0	0.0	None
N22 \| OsN22RS2 \| Gramene(+IsoSeq)	OsN22_01G001070	RBH	0.339337	0.0	0.0
NATEL BORO \| Os127652RS1 \| Gramene(+IsoSeq)	OsNaBo_01g0001000	RBH	0.000000	0.000000	2.643442

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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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