Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_12g0022210 | OGI:12070090 | 12/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr12:26420851-26425813 | ||||||||
| Gene Symbol | TPR215, OsTPR215 | ||||||||||
| DNA seq | ggtttcgtttccttccttcttctcctcctcctccttctcccaatcgatcgcattcgaagcttcctccggtagctccggtgagggtgatggacgacctggacatggcgctgcctcaggccttcgagctcctcctcggcagaggtgatccatccatccattccctcatcctccctccctaaaccctagcgatcgatcgtttgtttcagtttgttcttaataatctcatcttttccattgctccatccgtgcagatcgagacgcctggccgcgcggggccgcgttcctcgtcgccgcccactacggggacgtccgcgaaatgaagagtaagccacatccaagaacccattttctttcccccctttgggttctgcttctgcatcgcatttggtacgaatttcttgctgaacatggctgcggggttttcatgtgtgggtgcttgcgctggattcttctggtatgatgttgatctgtttgtgccacggattcttggggggtgggggtgggggggtgctcttctctaattttggactaaaatctgggtacaaaaccacccaaagattgcaacttcgtgtatatacagctcgaaagtttcgttatgttcctaaaatgtctcccttttcttcttggtttgtgaagggattgcaaaggagctggacgaggacggcaaagggatcgaggcgactgtggctaacacaagcttcctcggcatgaacgcccttcacgcactgggttggctcggcaaggtgccggcctaccggtatctggtagaggaggtcaaaatggacgtcaacaaggccgacactgctcagggtaataatctactccagttcgcttgcatcttgaaaacatgttcttggatatgctttgcttggctcgacgatttgttcttccatcttcaactgtgtgtgcttgttgttaggattcacacccctggagcatgccgtctaccatggtcgcctgcctgccaccagatacctccttgatcatggcgctgatgtgcatcaaattcgctctacgggaaatgtctctcttcttcactcagctgcagtaaaaggtatcaacatagcttggcctctgatatgcccttaggattatcctttttcctgtcttagttagttgtctgccagcccatcctgctagaacatccatgttttcactgtaagaaactctgccattcccttgatttattcttttgcgatggatccaatttgtagtattgaacattaagccggagatccttatgttgaaatcagggagaactgtaaataataatagaaaaatgttttagtctgatagctattcaagcctaattgggaatactaatattgcgattagcttgtgatcgctagatgcaaatgtttactggtgcttttattttcttttgtaaccataaattgcacaaggatggtctactctgatgtgcttctcatatccatcaatgtcatgtagtcttttgaaaattttaagatgctttccaggttaaataaaatcctctggcctaagtttcataaaatttcctgtgtcattaaattgctataagtttttggaagcaattgtatttacactatcacttgtgggatcatcttttgcatgtgttttttcacgcattgcttcactatagccattaaaattagtttgcccccaaatgatcctttgcttagtatgataaccactggtgtttcattatgccaattggaaaattgctgtttatatttagatgctgaagcttgattcctctataacagtttgcccatatatttttatgacctttggttttccacctatttattcagggttctctgaagtagcaaaatttctgctttctagaggagttaatgttgatgcagaatcagaaatggggacaccactggctcttgctgctttcagaggatatgatagcactgtcaaggtccttttggagcacaatgctgatgtacgattgctttcatttctctgttggctttcagcatgaatctgttctcctttgcccctaagccgtggccttcgttattttcttcccacttgtacacagcatctcacagttaatgtgtgagctaacccaggcgtgggagaaggggcccacacaacagaaactctgataaagcaataggacaagcatataaaatacactttacagaataagcttcagcacattttttccttcagaattcttctttcttttggactgtcattactttgcatgacaattgatattctttgttttttccagcccaacaaggttacaaacaaggcacttggtgcacctttagacttggcattaaccagctcttctgtgtcctgtgtgaagctgttggttcaggtatagctctccctgctttatatggccgtaggtttctctaaagtggtgggtgtagtttacctctgtataaaagcatcaattataaggagaaaccatatgtttgtttatgctgtacacttgaatttaataggctggagctgaagtgaaagttgaggggccaaataatcatttggtaagagctgctgagaaaggcttaactgaagctattaaatgcatgttggaagctggtgcaaacccaaatgttcctgacagggtaagccttctcctttgtcacaccggtgatatctgcttcagtagtaaacggtttgatactaatttatgaacaaatgccacagtatgttcatgcataagttttttactgtttcctttttatttccttttgccatgtttttattaatttggttaggtatgcctagatatttgtctcatactagcaccaccttggtctgttctaaaggaaatggattaataagtttgctgtttacatgattgtccaggagaggtaccatttcattaaaatggaactaggctactctttcattaatctatattatcactatgaagagcatatatcctgaacatcaagaagagctttttgctacttgttttatttcaaattttcaatatttctatttcattcttcatttgttggacagctcgggagaatgccaatagagctggctgctgagtatggcacacgggaagatgttgagattctctttcctttcagctctgctattccaactgtggcaaattggagtgttgatggaataattaatcatgtacagtcagaaatcaagcaactagaggtatgtaccaattttcttgtgcatcttgcaacaatcctggtcttctgtgcaatgtcggcagccactcagtgtaaaccaatatgttttatggattaacactattactttaaaagcaagattcctgaagcattgcacatttctctgtggaacttgcaagtgagtaccaggaatctgaaacaatgcattgattggatctgtttttttagccctttcacttcaccttaacttcttgttgtaatatgtttcttcactgctagcatcagatctttgaatatatgtctaattttagatattatttactcaggacgataattttatcaaaaagagaaggtctgacatgaaacaacaaggggatgctgcatttaagaagcaggattatctaaatgcatcagtgttctacactcaggtacattcttcggaaccattcccatggtacatcattggaccatattcctcattgtatatgccgttacttgtgtatcttcatctggcggacacaatatgttattgctactgtgtttctgactccagaagacacagggaaaaaaaactctattggaagattcttttatgatatttgggatttaactgaagattggaggtgtttacactacacaataagaaactagtattgaattaaaacccacctatcgatttgcccaaacaggccttacatggttcaccttgtttctttttctccatgaagttgatcttgttgttcatttacttttccagtgcacaaaatttggttggttatctcattatactatcacacatctccttgcatattagagcataagctgaacagtgtggactggaaacttttgtagcctgaagctagcagtagcagcacccaccaccaccaccacacacacgcatgctctacacacaaagcagtccactgatatctgtcttccattaatccctttagtttaattgggaggagttggtgggaattgcccttttaccgagaacttcaattttacctggttagggtgttggtccaagtcgatcagtgctgagaactggtatagcaataacagcaataaatctggcactgtttggttctttgcaggcactgaaggttgatccgtttgatggcacgttgttctcaaacaggagtctttgctggctccgcatgggtgatggagaaagggctttggatgatgccaatgcatgcgaaaagctacggccaaagtgggcaaagtcctactatcggcaaggagcagctctaatgtttctgaaggtgaactagacaagatatgcgttttgacaattcacttgttccttgtatatcttctactcctgtttgatttggctttgcacttgtgttccttaggagtatgagagggctcatagggcacttggtcgagctttagagttggaccctgaaagtgaagagatcgagaatttgtattggtaagatatctttttctatcaacaaaatctggctgttgttttgttccatgttgtaattggttgctgatccttacagggagtcgatggaactgtgcggttgatccctgaaatgccagctacagatagaagaagcacacgcagaactggaagctccttttgtgttatgaaagatggaacgacgcaaacgctcagtgatttgctgctttttgtgtacatatacttaggctgtcaaaacagaaacaaatgtctggtcttttatgtcgtgtttcgtcgtgacatcttcctggagtggctgttagactaaactagcattatcacattctatctgttgctagtatgggcagaggatgatcaactgtctaagcaagctggaatgatatgaattctctgaaatgttatgcataatataattgtg
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| CDS seq | atggacgacctggacatggcgctgcctcaggccttcgagctcctcctcggcagagatcgagacgcctggccgcgcggggccgcgttcctcgtcgccgcccactacggggacgtccgcgaaatgaagaggattgcaaaggagctggacgaggacggcaaagggatcgaggcgactgtggctaacacaagcttcctcggcatgaacgcccttcacgcactgggttggctcggcaaggtgccggcctaccggtatctggtagaggaggtcaaaatggacgtcaacaaggccgacactgctcagggattcacacccctggagcatgccgtctaccatggtcgcctgcctgccaccagatacctccttgatcatggcgctgatgtgcatcaaattcgctctacgggaaatgtctctcttcttcactcagctgcagtaaaagggttctctgaagtagcaaaatttctgctttctagaggagttaatgttgatgcagaatcagaaatggggacaccactggctcttgctgctttcagaggatatgatagcactgtcaaggtccttttggagcacaatgctgatcccaacaaggttacaaacaaggcacttggtgcacctttagacttggcattaaccagctcttctgtgtcctgtgtgaagctgttggttcaggctggagctgaagtgaaagttgaggggccaaataatcatttggtaagagctgctgagaaaggcttaactgaagctattaaatgcatgttggaagctggtgcaaacccaaatgttcctgacaggctcgggagaatgccaatagagctggctgctgagtatggcacacgggaagatgttgagattctctttcctttcagctctgctattccaactgtggcaaattggagtgttgatggaataattaatcatgtacagtcagaaatcaagcaactagaggacgataattttatcaaaaagagaaggtctgacatgaaacaacaaggggatgctgcatttaagaagcaggattatctaaatgcatcagtgttctacactcaggcactgaaggttgatccgtttgatggcacgttgttctcaaacaggagtctttgctggctccgcatgggtgatggagaaagggctttggatgatgccaatgcatgcgaaaagctacggccaaagtgggcaaagtcctactatcggcaaggagcagctctaatgtttctgaaggagtatgagagggctcatagggcacttggtcgagctttagagttggaccctgaaagtgaagagatcgagaatttgtattgggagtcgatggaactgtgcggttga
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| Protein seq | MDDLDMALPQAFELLLGRDRDAWPRGAAFLVAAHYGDVREMKRIAKELDEDGKGIEATVANTSFLGMNALHALGWLGKVPAYRYLVEEVKMDVNKADTAQGFTPLEHAVYHGRLPATRYLLDHGADVHQIRSTGNVSLLHSAAVKGFSEVAKFLLSRGVNVDAESEMGTPLALAAFRGYDSTVKVLLEHNADPNKVTNKALGAPLDLALTSSSVSCVKLLVQAGAEVKVEGPNNHLVRAAEKGLTEAIKCMLEAGANPNVPDRLGRMPIELAAEYGTREDVEILFPFSSAIPTVANWSVDGIINHVQSEIKQLEDDNFIKKRRSDMKQQGDAAFKKQDYLNASVFYTQALKVDPFDGTLFSNRSLCWLRMGDGERALDDANACEKLRPKWAKSYYRQGAALMFLKEYERAHRALGRALELDPESEEIENLYWESMELCG |
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| Function | Ankyrin repeat and protein kinase domain-containing protein 1 [UniProtKB/Swiss-Prot:Q8NFD2] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_12g0022210 | OsKeNa_12g0022210.01 | Chr12 | 26420851 | 26425813 | + | NAM | ||
| CDS seq | atggacgacctggacatggcgctgcctcaggccttcgagctcctcctcggcagagatcgagacgcctggccgcgcggggccgcgttcctcgtcgccgcccactacggggacgtccgcgaaatgaagaggattgcaaaggagctggacgaggacggcaaagggatcgaggcgactgtggctaacacaagcttcctcggcatgaacgcccttcacgcactgggttggctcggcaaggtgccggcctaccggtatctggtagaggaggtcaaaatggacgtcaacaaggccgacactgctcagggattcacacccctggagcatgccgtctaccatggtcgcctgcctgccaccagatacctccttgatcatggcgctgatgtgcatcaaattcgctctacgggaaatgtctctcttcttcactcagctgcagtaaaagggttctctgaagtagcaaaatttctgctttctagaggagttaatgttgatgcagaatcagaaatggggacaccactggctcttgctgctttcagaggatatgatagcactgtcaaggtccttttggagcacaatgctgatcccaacaaggttacaaacaaggcacttggtgcacctttagacttggcattaaccagctcttctgtgtcctgtgtgaagctgttggttcaggctggagctgaagtgaaagttgaggggccaaataatcatttggtaagagctgctgagaaaggcttaactgaagctattaaatgcatgttggaagctggtgcaaacccaaatgttcctgacaggctcgggagaatgccaatagagctggctgctgagtatggcacacgggaagatgttgagattctctttcctttcagctctgctattccaactgtggcaaattggagtgttgatggaataattaatcatgtacagtcagaaatcaagcaactagaggacgataattttatcaaaaagagaaggtctgacatgaaacaacaaggggatgctgcatttaagaagcaggattatctaaatgcatcagtgttctacactcaggcactgaaggttgatccgtttgatggcacgttgttctcaaacaggagtctttgctggctccgcatgggtgatggagaaagggctttggatgatgccaatgcatgcgaaaagctacggccaaagtgggcaaagtcctactatcggcaaggagcagctctaatgtttctgaaggagtatgagagggctcatagggcacttggtcgagctttagagttggaccctgaaagtgaagagatcgagaatttgtattgggagtcgatggaactgtgcggttga
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| Protein seq | MDDLDMALPQAFELLLGRDRDAWPRGAAFLVAAHYGDVREMKRIAKELDEDGKGIEATVANTSFLGMNALHALGWLGKVPAYRYLVEEVKMDVNKADTAQGFTPLEHAVYHGRLPATRYLLDHGADVHQIRSTGNVSLLHSAAVKGFSEVAKFLLSRGVNVDAESEMGTPLALAAFRGYDSTVKVLLEHNADPNKVTNKALGAPLDLALTSSSVSCVKLLVQAGAEVKVEGPNNHLVRAAEKGLTEAIKCMLEAGANPNVPDRLGRMPIELAAEYGTREDVEILFPFSSAIPTVANWSVDGIINHVQSEIKQLEDDNFIKKRRSDMKQQGDAAFKKQDYLNASVFYTQALKVDPFDGTLFSNRSLCWLRMGDGERALDDANACEKLRPKWAKSYYRQGAALMFLKEYERAHRALGRALELDPESEEIENLYWESMELCG
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.487538 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0636100 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g43940 | RBH | 0.000000 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0636100 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0022130 | RBH | 0.0 | 0.0 | 0.559346 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_03g0029810 | SBH | 0.0 | 0.0 | 0.114046 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0022570 | RBH | 0.000000 | 0.922717 | 0.384940 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0021540 | RBH | 0.000000 | 0.000000 | 0.515348 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0366900 | RBH | 0.989705 | 0.2032185 | 32.7912015 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0367800 | SBH | 0.980835 | 0.0133815 | 20.4726635 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0021670 | RBH | 0.048082 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0021910 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0021770 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0021870 | RBH | 0.0 | 0.0 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G021550 | RBH | 0.0 | 0.0 | 0.412608 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0021290 | RBH | 0.0 | 0.0 | 0.000000 |
