Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_12g0015410 | OGI:12051320 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr12:19737725-19743631 | ||||||||
| Gene Symbol | RLCK371, OsRLCK371 | ||||||||||
| DNA seq | atggcaattggtggccagaagcaacacaatcttgtgccttccttgtaccttgccggaggctggcttctgctgcttctttcagctagcccatgtgaggcccggtggctgaaagacaagaagcccgtatgggtatggctgaccgccgtggtcgcaacggtggtcgccgtggtcgtagcggtggtcctcatcgtgatcgcctacaggatgttccggcgtacgaggcaggtggctgcagcagccgccgaggaggaggactaccgcgagcagaagatgttctacggtggctacttcgcgcccgctcgcgccgtcgacgacccgatgtcgatcaacgcgaacatggtgcggagcccggaacgcatgtggcagtctcccgcgcgaagcagcagggcccccgcgtcaccggcgttgatgagggcggtggcgtctcctccaaacagcacgcgcagtgcggtggggctggccgagcggcatatcgccggcttgaaccgtaagacggcgccggtggccagcccgagccgtcccaggacgatgaatccgttgcctggcttctcacctgcgttgccggtgaggctcaaggaattcagttaccagagcttggcggaggcgacgtcaaacttccacaagagcaatgaacttgggcgaggcaggtccggcaaagtgttcaaaggagcctttcgagtccctgagaacgtcgacaaggacgactccaagatagatgtggccattaagagatttgacaaggacatcgacatcagacaaattcgtggagatctcaaacgcaagtactcactcaaacacaggaatcttgtcactctccttggtatgatcaatcactacactctactccttaattaattagctatatttataaatttacgataaatttagggtgaatagctaaatggtcctccaaattttatctgaggctcagtttagtccttgatgtttcattctatatgtattagtccttcaagtttttattttagtttaaactcatccttgaactaacaactctctcgataaatgacacttttcccccatcattcacatatataagagaaaaattgcatgcttgatttttttatagataatgcacaataaattatgtaaaatgaaaataaattatgtactagaaagtgtatacgatagcaattgcttaagtttcatgtgcacgtgttaaaataatggtaagtacatatgcaatgttgtttatttatcttggttttctcttttatagtacattgctgtatacaaattaagagcaaaagggacattttctaatagaaattttgactagaaatagccatatcacatattaagtgggcccaaggatgatttcaagcaaaaacaaatatttagaggagctatgtggacaaaatgaaacgtgaaggaccaaattgagcctccggtgaaacttgagggactaaattagctatttacccataaatttcattagctgttaattaatcttaattggtttcttaaagtcatattaacccaatttttttttaaaaaatacagtactatgctgctagcaatacgtacttcatttttattcatttttttacaaattcttacaaccaaagatgccacccgtatgaatcagtgagtagttacgaaaaatcaagagagcaaccacatcgtgccattcagtgtttgtaaaaaaaattgtaaatttttcttttcacatgtatcaacttaaattaaaaccgcattaatccgtcaatattagtccataactgatgaaattttagtttttgcttgctgcttaatgattgttctccatcacgtcatggtatgctttcatcagtttaatttataatttcattttgttctaaaggaagatagtagggtataatatgcttgcttctcttacacgaaaacaggactgcttcaacgataaaagtttccaactctcatattatatattggcagttttatatgtagttcacgtcaaaattagaagtttgattgaaattagaacgatgtgacggaaaaattggaagtttgtgtgtaggaaagttttgatgtgatggaaaagttggaagtttaaaaaaaatgaaactaaattcagccgtactccctccgtccacaaatataaccacctagaattggatgagacattttctatcaaaaatgcattatattaggaaatatctcatccagtaatatattctataggacgtagagagtatttctgtggggtggttaacattaagcccaatcaccaataattaatatttctccaccagaggtcctatacttgccaggctgccacaccctttttattgttgcggtcactatatattatatactactccgtttcaaaaaaaaaaaagatcgatcctggctacaaaactggacatgcacatatatctaggtttaggtcatttttaagacagaaggggcacaatatataggattgacatacaatgacatacttccatgattttaacaacatttgcatttagaaaaccaccatgaagtaaaggatacaatatgaaaatgctttaatttgtacagttcctacctacaaggctttagagcaaggataatagtgggctataagccaactataagcttatatatgaaagagagataaagaaaaataataagtgttggctttcatatgtaagaggctctacacatactctaacacatatgcaacaaattcatagtgggagaaaaggagaggagaaaaaatagtgctaaccggcctatagctaacttattatatacgctaactccaatattaactaatagctaatagttagccctactattaaacctgctcttagagcaagtagcaagtgggctatagggattgccccatcagattgtgccggtggaagatagggaagaggaaattgaaaaaaaaaacgcaggttacataattggagcccgctgcaattaacactggcaccaagaaacattataagagagtgagatagagtcaagtatttttttggggcaaagagagtcaagtattaatggtatagtgtgaatatatatctctataattataaaaattaaagatgtttttgctagtattttggtacgtcatctgtgtatgagtcggtttttaaatttgttcgcttttaaaaatataaaaggagtcgtataataaatcttttttcaaaaaactccgctaacttgagacgaacggactcctatctgcagttcatgattttctaaaaatatatatattcaagcgaattttccacggtgaattttaccttaactaaaccatataacaataataagattaaaatagtcttcacccattgtaacgcaccggtacttttttctagtatatatagaaagctaactgttacatagatagactattatatttatacatagagtcaatagtcagctctactattaaccttgctcttgtatggcaacgtcagtgtttaagttgtatgatgggtgttatagatagggtccacatgaggtacggcatataggatatagatggccttttggcccgcccggcacggcccggcccaggcacggcccaccagccatcgggccggcacggcccgatcggcacttcgtgccgggccgtgccggcccatgggctgcgcctcccgcccaggcacggcccaccagccgtcaggccgtgccaggccggcccgaaggcgggagtggcccatcgtgccttttttatataagtctattttccatccctcctctttggactgtgacatatatatagcgaaaataagtctattttccgtccctcttctttggactgtggcatatatatagtgaaaataagtctattttctgtccctcctctttgggctgacatatatatagctaaaataagtctatttttacgtccctattctttcgaccatggcatataatatgtctatttttagtccctattgtttatgtgtcgggcctagcctgcggcccatcgtgcggtgccggcccggccgtgtcgggccggcccaacgtgccggtggagaggcccaggcacggcccagcggtcgggccgggccggcacgggcccgacccctgacgggccgtgccgtgtttgggccgggccaaaacaccgtgccgtggcccgggccatcggacctcgggccttttggccatctataatataggatgaacaatagcgatcaatagcagccttgtagcttattaactagctgacagagaagagagggagagtagaggagaaagaaccattgatgttaagcttaacatcaaatcttagcattcataaaagaaaattttgttgtatgagatgggtagaggaaagaaaaagttttggtatatattaatgattatatcttaatgtgtttatatatgcatgtctcaactgttgtaagagaattctatatctttgaatataccttaatgctttactaagtcgtaagatgggtgcactaggttgggtcgtccccatacaacttggtgaaaataaccggtgagagaacaattagatgagtctagtatacgcgctgtcttgtatgactaagtttcattgcaagcatctaattctattttggaaagaaattaaaaaaccccataatttgaaagactggtcccaccatatccttctcttcatatacaggggaccgttccgataccctccctgttcatttgtacccttgtaaaatagacgtgaccaggtagtgcacggtagtgttttagtcctaactggagaccactctgtctaaaaacattatgtttattacgagggttttagaagacataacatagagatgaaattacttcgatggccgtaagattttatttgattgattgggaaagatcacatctaatgtgcaagtatcagtgagcaaagtatttgaacagatagaggaaataataatatatatttgcttatatttatagataaattttaaatagtagagtgattatatttcttttgccaacagattgtttgccaggataatatataggatatttaccagcagactgactggccaccaatagttgatttttcccgacagattactgccttctatttggtattgtggtgtagtgaattttggaagaattttttgagagtgaaaacttatagaattaccaaaatatatttggtatgatagtattggtaattaacattttggtaagcatttaggtttttttttatcaaggagttattaatatatactactcgatcgattatatgattgtacttcagggtacggcttgcacaagggtcgcctgtacctagtctacgatctcatgagctgtggcagcctcgaccaacgcctctattccgacgtcgagacggtcggcgccgacgacggccagccaagccgtcacgtcatgagctgggacgagcgctgcaacatcatcaaagacgcggcactggggctgtaccagctgcacgtcagcaacgccttccatggatccgtcaaggcctccaacatcttgctcgagcctggccgtgaaggccggcgagcccgtctcggcgacttcacctactccaaggtcgcgccgccgccgcaagaagcctggacgtccaccaccccttccctggagacggacatgctcgacttcggcgccttgatcctggaggtggtgtgcggccgccgccggtccggctgcggcgtcccaaacttcacctcccttctggactgggtgtgggcgcagcacgcacaagggcgtctcccggcggcggtcgacgagaagctcgccggcaacttcgatagcaaacatgccgtcaatcttctcctcgtcggcctcgcgtgcacccacgaaccgcagaggcgcccgacgatcgacgaggtcagcatggtcatcagcggtacgaagtcaccaccggaggtcgccaccagtatgaggccgtcaagggaggtgcatacatcatatgacgaaatcttccgaaacatttggtcaactcgcaaagcttga
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| CDS seq | atggcaattggtggccagaagcaacacaatcttgtgccttccttgtaccttgccggaggctggcttctgctgcttctttcagctagcccatgtgaggcccggtggctgaaagacaagaagcccgtatgggtatggctgaccgccgtggtcgcaacggtggtcgccgtggtcgtagcggtggtcctcatcgtgatcgcctacaggatgttccggcgtacgaggcaggtggctgcagcagccgccgaggaggaggactaccgcgagcagaagatgttctacggtggctacttcgcgcccgctcgcgccgtcgacgacccgatgtcgatcaacgcgaacatggtgcggagcccggaacgcatgtggcagtctcccgcgcgaagcagcagggcccccgcgtcaccggcgttgatgagggcggtggcgtctcctccaaacagcacgcgcagtgcggtggggctggccgagcggcatatcgccggcttgaaccgtaagacggcgccggtggccagcccgagccgtcccaggacgatgaatccgttgcctggcttctcacctgcgttgccggtgaggctcaaggaattcagttaccagagcttggcggaggcgacgtcaaacttccacaagagcaatgaacttgggcgaggcaggtccggcaaagtgttcaaaggagcctttcgagtccctgagaacgtcgacaaggacgactccaagatagatgtggccattaagagatttgacaaggacatcgacatcagacaaattcgtggagatctcaaacgcaagtactcactcaaacacaggaatcttgtcactctccttgggtacggcttgcacaagggtcgcctgtacctagtctacgatctcatgagctgtggcagcctcgaccaacgcctctattccgacgtcgagacggtcggcgccgacgacggccagccaagccgtcacgtcatgagctgggacgagcgctgcaacatcatcaaagacgcggcactggggctgtaccagctgcacgtcagcaacgccttccatggatccgtcaaggcctccaacatcttgctcgagcctggccgtgaaggccggcgagcccgtctcggcgacttcacctactccaaggtcgcgccgccgccgcaagaagcctggacgtccaccaccccttccctggagacggacatgctcgacttcggcgccttgatcctggaggtggtgtgcggccgccgccggtccggctgcggcgtcccaaacttcacctcccttctggactgggtgtgggcgcagcacgcacaagggcgtctcccggcggcggtcgacgagaagctcgccggcaacttcgatagcaaacatgccgtcaatcttctcctcgtcggcctcgcgtgcacccacgaaccgcagaggcgcccgacgatcgacgaggtcagcatggtcatcagcggtacgaagtcaccaccggaggtcgccaccagtatgaggccgtcaagggaggtgcatacatcatatgacgaaatcttccgaaacatttggtcaactcgcaaagcttga
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| Protein seq | MAIGGQKQHNLVPSLYLAGGWLLLLLSASPCEARWLKDKKPVWVWLTAVVATVVAVVVAVVLIVIAYRMFRRTRQVAAAAAEEEDYREQKMFYGGYFAPARAVDDPMSINANMVRSPERMWQSPARSSRAPASPALMRAVASPPNSTRSAVGLAERHIAGLNRKTAPVASPSRPRTMNPLPGFSPALPVRLKEFSYQSLAEATSNFHKSNELGRGRSGKVFKGAFRVPENVDKDDSKIDVAIKRFDKDIDIRQIRGDLKRKYSLKHRNLVTLLGYGLHKGRLYLVYDLMSCGSLDQRLYSDVETVGADDGQPSRHVMSWDERCNIIKDAALGLYQLHVSNAFHGSVKASNILLEPGREGRRARLGDFTYSKVAPPPQEAWTSTTPSLETDMLDFGALILEVVCGRRRSGCGVPNFTSLLDWVWAQHAQGRLPAAVDEKLAGNFDSKHAVNLLLVGLACTHEPQRRPTIDEVSMVISGTKSPPEVATSMRPSREVHTSYDEIFRNIWSTRKA |
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| Function | Putative L-type lectin-domain containing receptor kinase V.2 [UniProtKB/Swiss-Prot:O04533] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_12g0015410 | OsKeNa_12g0015410.01 | Chr12 | 19737725 | 19743631 | + | NAM | ||
| CDS seq | atggcaattggtggccagaagcaacacaatcttgtgccttccttgtaccttgccggaggctggcttctgctgcttctttcagctagcccatgtgaggcccggtggctgaaagacaagaagcccgtatgggtatggctgaccgccgtggtcgcaacggtggtcgccgtggtcgtagcggtggtcctcatcgtgatcgcctacaggatgttccggcgtacgaggcaggtggctgcagcagccgccgaggaggaggactaccgcgagcagaagatgttctacggtggctacttcgcgcccgctcgcgccgtcgacgacccgatgtcgatcaacgcgaacatggtgcggagcccggaacgcatgtggcagtctcccgcgcgaagcagcagggcccccgcgtcaccggcgttgatgagggcggtggcgtctcctccaaacagcacgcgcagtgcggtggggctggccgagcggcatatcgccggcttgaaccgtaagacggcgccggtggccagcccgagccgtcccaggacgatgaatccgttgcctggcttctcacctgcgttgccggtgaggctcaaggaattcagttaccagagcttggcggaggcgacgtcaaacttccacaagagcaatgaacttgggcgaggcaggtccggcaaagtgttcaaaggagcctttcgagtccctgagaacgtcgacaaggacgactccaagatagatgtggccattaagagatttgacaaggacatcgacatcagacaaattcgtggagatctcaaacgcaagtactcactcaaacacaggaatcttgtcactctccttgggtacggcttgcacaagggtcgcctgtacctagtctacgatctcatgagctgtggcagcctcgaccaacgcctctattccgacgtcgagacggtcggcgccgacgacggccagccaagccgtcacgtcatgagctgggacgagcgctgcaacatcatcaaagacgcggcactggggctgtaccagctgcacgtcagcaacgccttccatggatccgtcaaggcctccaacatcttgctcgagcctggccgtgaaggccggcgagcccgtctcggcgacttcacctactccaaggtcgcgccgccgccgcaagaagcctggacgtccaccaccccttccctggagacggacatgctcgacttcggcgccttgatcctggaggtggtgtgcggccgccgccggtccggctgcggcgtcccaaacttcacctcccttctggactgggtgtgggcgcagcacgcacaagggcgtctcccggcggcggtcgacgagaagctcgccggcaacttcgatagcaaacatgccgtcaatcttctcctcgtcggcctcgcgtgcacccacgaaccgcagaggcgcccgacgatcgacgaggtcagcatggtcatcagcggtacgaagtcaccaccggaggtcgccaccagtatgaggccgtcaagggaggtgcatacatcatatgacgaaatcttccgaaacatttggtcaactcgcaaagcttga
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| Protein seq | MAIGGQKQHNLVPSLYLAGGWLLLLLSASPCEARWLKDKKPVWVWLTAVVATVVAVVVAVVLIVIAYRMFRRTRQVAAAAAEEEDYREQKMFYGGYFAPARAVDDPMSINANMVRSPERMWQSPARSSRAPASPALMRAVASPPNSTRSAVGLAERHIAGLNRKTAPVASPSRPRTMNPLPGFSPALPVRLKEFSYQSLAEATSNFHKSNELGRGRSGKVFKGAFRVPENVDKDDSKIDVAIKRFDKDIDIRQIRGDLKRKYSLKHRNLVTLLGYGLHKGRLYLVYDLMSCGSLDQRLYSDVETVGADDGQPSRHVMSWDERCNIIKDAALGLYQLHVSNAFHGSVKASNILLEPGREGRRARLGDFTYSKVAPPPQEAWTSTTPSLETDMLDFGALILEVVCGRRRSGCGVPNFTSLLDWVWAQHAQGRLPAAVDEKLAGNFDSKHAVNLLLVGLACTHEPQRRPTIDEVSMVISGTKSPPEVATSMRPSREVHTSYDEIFRNIWSTRKA
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.000000 | 2.566211 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_12g0500400 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os12g41540 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os12g0500400 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_12g0015270 | RBH | 0.123682 | 5.396679 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | NA | NA | NA | NA | NA |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_12g0012280 | SBH | 0.0 | 0.000000 | 2.251904 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_12g0015120 | RBH | 0.0 | 0.036390 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_12g0011750 | SBH | 0.916401 | 6.045685 | 2.553680 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_12G0257500 | SBH | 0.0638845 | 0.0620625 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_12g0014820 | RBH | 0.000000 | 0.182930 | 0.137387 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_12G0376900 | SBH | 3.1579 | 41.4187205 | 0.3747955 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_12g0013920 | SBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_12g0015210 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_12g0014090 | SBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_12g0020170 | SBH | 0.893615 | 0.0 | 0.400186 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_12g0015220 | RBH | 0.076866 | 4.271760 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_12G014020 | SBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_12g0013840 | SBH | 0.0 | 0.0 | 0.0 |
