Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_11g0021650 | OGI:11072590 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr11:26649656-26651149 | ||||||||
| Gene Symbol | OsFbox634, Os_F0372 | ||||||||||
| DNA seq | ctatgtactttcactgatttcggtttccgctgtcaaaacgtgcagttcttcgagaaacattgcgttttcagcgaagaatttgatcagacgaactccaaaacaatcggaatcctctcccaacctgaactgcagactgactcttctcaaactactcttcaagcatgcgaaggagcaatcactcagtccacggatatccaatctctgattcgattcgaatttgatgaggcgcatgaaatcatcgatcgacttcccgaaatccgcatcacatttcttctgaaacaaatgcttcacttgcttggagttcttgcaggaatcaggtggcaaatcgctgatgaaattgagctcgagttgacgaagcaccgggcagcaatggagcaggctggcgatcgtcgccgccgccgtctccgccgccatgctccagccgctgtaagctccgtcgagctcgaggcggaggtgttccagttcggggaacacctcggcgacggccatgtcgtcgaggtggttcgccttgagcctgagcaccttggcgttggtgaagttgtggatgaaatgcgagtagtcgacgcatcgccccatgccgtgggtgaagtggaggtcggcggcgaccaccgtcgtcgtgtccggcgccggcgccggcgacggcggcgaggttaggtcgaaccgcaccgcttctcccttgtacgtgaaggatcgcagcctcagcgcggtgatctccattgatctgcccggtgcgccttcttcgccgcggcagtggatcagcgcgagcacggtggccgacgggaagcggaggccggtgttccatgttacggggccgaagcggcgatggcgatcggacgagaggaggacgaactcgaggtgcacggtggcgagctccggcgcggcgtcgacgatgccgtggaggtgtttgacgctatacgtgcagtgtcgcagccgtagcgtcgttagcctcgggaaggcgacggcggcggaggcggtgcgcggcggcggcggcggcgagaagttgtggcacctggtgaggtccagcacgcggagggtgttcgacgggagggaggagaacctgaggatgtagaggaagacgtcgtcgtccatcacggcgtcgtcgtgttcgtccggctggccacggtggacggcggcgacgcggagctcctcgacgcggcgggccgccgggtgggcgaccacggcgtcgagcacgtcgtgatctccgactctgagcgagttgtacgtggagcactcgtcgtctccctcgacgtgcagggtgagcctcgtgacggcgcggtcggcggcggcgagcgccgcctcggcggcacggacgaaagcgtccctgccgtcggggacgcacgcggcgaggttgacggcgccggaggagcgccagagcgcgccgaaccgccgcgacagcaagctggtggacgcggcctccttggcgggcgcgaagtggaggacgcgaatgaggaggtcgtcggggagggcggacaggcggtcgtctccggccgacat
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| CDS seq | atgtcggccggagacgaccgcctgtccgccctccccgacgacctcctcattcgcgtcctccacttcgcgcccgccaaggaggccgcgtccaccagcttgctgtcgcggcggttcggcgcgctctggcgctcctccggcgccgtcaacctcgccgcgtgcgtccccgacggcagggacgctttcgtccgtgccgccgaggcggcgctcgccgccgccgaccgcgccgtcacgaggctcaccctgcacgtcgagggagacgacgagtgctccacgtacaactcgctcagagtcggagatcacgacgtgctcgacgccgtggtcgcccacccggcggcccgccgcgtcgaggagctccgcgtcgccgccgtccaccgtggccagccggacgaacacgacgacgccgtgatggacgacgacgtcttcctctacatcctcaggttctcctccctcccgtcgaacaccctccgcgtgctggacctcaccaggtgccacaacttctcgccgccgccgccgccgcgcaccgcctccgccgccgtcgccttcccgaggctaacgacgctacggctgcgacactgcacgtatagcgtcaaacacctccacggcatcgtcgacgccgcgccggagctcgccaccgtgcacctcgagttcgtcctcctctcgtccgatcgccatcgccgcttcggccccgtaacatggaacaccggcctccgcttcccgtcggccaccgtgctcgcgctgatccactgccgcggcgaagaaggcgcaccgggcagatcaatggagatcaccgcgctgaggctgcgatccttcacgtacaagggagaagcggtgcggttcgacctaacctcgccgccgtcgccggcgccggcgccggacacgacgacggtggtcgccgccgacctccacttcacccacggcatggggcgatgcgtcgactactcgcatttcatccacaacttcaccaacgccaaggtgctcaggctcaaggcgaaccacctcgacgacatggccgtcgccgaggtgttccccgaactggaacacctccgcctcgagctcgacggagcttacagcggctggagcatggcggcggagacggcggcggcgacgatcgccagcctgctccattgctgcccggtgcttcgtcaactcgagctcaatttcatcagcgatttgccacctgattcctgcaagaactccaagcaagtgaagcatttgtttcagaagaaatgtgatgcggatttcgggaagtcgatcgatgatttcatgcgcctcatcaaattcgaatcgaatcagagattggatatccgtggactgagtgattgctccttcgcatgcttgaagagtagtttgagaagagtcagtctgcagttcaggttgggagaggattccgattgttttggagttcgtctgatcaaattcttcgctgaaaacgcaatgtttctcgaagaactgcacgttttgacagcggaaaccgaaatcagtgaaagtacatag
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| Protein seq | MSAGDDRLSALPDDLLIRVLHFAPAKEAASTSLLSRRFGALWRSSGAVNLAACVPDGRDAFVRAAEAALAAADRAVTRLTLHVEGDDECSTYNSLRVGDHDVLDAVVAHPAARRVEELRVAAVHRGQPDEHDDAVMDDDVFLYILRFSSLPSNTLRVLDLTRCHNFSPPPPPRTASAAVAFPRLTTLRLRHCTYSVKHLHGIVDAAPELATVHLEFVLLSSDRHRRFGPVTWNTGLRFPSATVLALIHCRGEEGAPGRSMEITALRLRSFTYKGEAVRFDLTSPPSPAPAPDTTTVVAADLHFTHGMGRCVDYSHFIHNFTNAKVLRLKANHLDDMAVAEVFPELEHLRLELDGAYSGWSMAAETAAATIASLLHCCPVLRQLELNFISDLPPDSCKNSKQVKHLFQKKCDADFGKSIDDFMRLIKFESNQRLDIRGLSDCSFACLKSSLRRVSLQFRLGEDSDCFGVRLIKFFAENAMFLEELHVLTAETEISEST |
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| Function | - | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_11g0021650 | OsKeNa_11g0021650.01 | Chr11 | 26649656 | 26651149 | - | NAM | ||
| CDS seq | atgtcggccggagacgaccgcctgtccgccctccccgacgacctcctcattcgcgtcctccacttcgcgcccgccaaggaggccgcgtccaccagcttgctgtcgcggcggttcggcgcgctctggcgctcctccggcgccgtcaacctcgccgcgtgcgtccccgacggcagggacgctttcgtccgtgccgccgaggcggcgctcgccgccgccgaccgcgccgtcacgaggctcaccctgcacgtcgagggagacgacgagtgctccacgtacaactcgctcagagtcggagatcacgacgtgctcgacgccgtggtcgcccacccggcggcccgccgcgtcgaggagctccgcgtcgccgccgtccaccgtggccagccggacgaacacgacgacgccgtgatggacgacgacgtcttcctctacatcctcaggttctcctccctcccgtcgaacaccctccgcgtgctggacctcaccaggtgccacaacttctcgccgccgccgccgccgcgcaccgcctccgccgccgtcgccttcccgaggctaacgacgctacggctgcgacactgcacgtatagcgtcaaacacctccacggcatcgtcgacgccgcgccggagctcgccaccgtgcacctcgagttcgtcctcctctcgtccgatcgccatcgccgcttcggccccgtaacatggaacaccggcctccgcttcccgtcggccaccgtgctcgcgctgatccactgccgcggcgaagaaggcgcaccgggcagatcaatggagatcaccgcgctgaggctgcgatccttcacgtacaagggagaagcggtgcggttcgacctaacctcgccgccgtcgccggcgccggcgccggacacgacgacggtggtcgccgccgacctccacttcacccacggcatggggcgatgcgtcgactactcgcatttcatccacaacttcaccaacgccaaggtgctcaggctcaaggcgaaccacctcgacgacatggccgtcgccgaggtgttccccgaactggaacacctccgcctcgagctcgacggagcttacagcggctggagcatggcggcggagacggcggcggcgacgatcgccagcctgctccattgctgcccggtgcttcgtcaactcgagctcaatttcatcagcgatttgccacctgattcctgcaagaactccaagcaagtgaagcatttgtttcagaagaaatgtgatgcggatttcgggaagtcgatcgatgatttcatgcgcctcatcaaattcgaatcgaatcagagattggatatccgtggactgagtgattgctccttcgcatgcttgaagagtagtttgagaagagtcagtctgcagttcaggttgggagaggattccgattgttttggagttcgtctgatcaaattcttcgctgaaaacgcaatgtttctcgaagaactgcacgttttgacagcggaaaccgaaatcagtgaaagtacatag
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| Protein seq | MSAGDDRLSALPDDLLIRVLHFAPAKEAASTSLLSRRFGALWRSSGAVNLAACVPDGRDAFVRAAEAALAAADRAVTRLTLHVEGDDECSTYNSLRVGDHDVLDAVVAHPAARRVEELRVAAVHRGQPDEHDDAVMDDDVFLYILRFSSLPSNTLRVLDLTRCHNFSPPPPPRTASAAVAFPRLTTLRLRHCTYSVKHLHGIVDAAPELATVHLEFVLLSSDRHRRFGPVTWNTGLRFPSATVLALIHCRGEEGAPGRSMEITALRLRSFTYKGEAVRFDLTSPPSPAPAPDTTTVVAADLHFTHGMGRCVDYSHFIHNFTNAKVLRLKANHLDDMAVAEVFPELEHLRLELDGAYSGWSMAAETAAATIASLLHCCPVLRQLELNFISDLPPDSCKNSKQVKHLFQKKCDADFGKSIDDFMRLIKFESNQRLDIRGLSDCSFACLKSSLRRVSLQFRLGEDSDCFGVRLIKFFAENAMFLEELHVLTAETEISEST
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_11g0642100 | SBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os11g42300 | RBH | 0.0 | 0.0 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os11g0642100 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_11g0021730 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_11g0021630 | RBH | 0.0 | 0.0 | 0.259594 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_11g0021520 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_11g0021040 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_11g0021530 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_11G0383100 | RBH | 0.015235 | 0.0076605 | 0 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_11g0022100 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_11G0403200 | RBH | 0 | 0 | 0 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_11g0021870 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_11g0021970 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_11g0021620 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_11g0021210 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_11g0021380 | RBH | 0.0 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_11G021360 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_11g0021910 | RBH | 0.0 | 0.0 | 0.426378 |
