Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_08g0022280 | OGI:08073960 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr08:26987303-27002651 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | agtagagtagaggagggaggcctgaacttctctcgtcaggtataagcttatctgaacctctcatcttattttaatatgtgagcttataggtttgcatttgcattcctcctgctttgcttttgttttcacctttctctttgtgttgtttaatgctcgcaattgatgtggttggatgagaggttttgtggggccaaagtggagagagagtgagaaagatgagggtgtgtggtttcttcttgcgaagctgttcttgatctttagcgaattttgtgtgctcccttttgagtgcttcaagaacatgtatgtatgcctctttgtccctggttcccatggccttccttcccttctcctcctctacatggactcgtctgtctctgcctttgcttcctccacacttcagaatgatgtgctcctgtgctgcccatgtccacctgatctttatgcttggctttgcctttttctctggtgttgcaagattgggaattgagcagagattgccatgttttcttggttcttgatggcttgctcttgttgtgtgtcctgttcttccccacaagatttcatcttttttcctcactcttgtttaagttaggattgtactctggtttctcaggagattgtagaattggttttattcagtacattgcctgttcatatatttgctccaagattttggtcatctgtttcatcagggattctgaatgtttttttaaatttttttctgcaaggagaaccacgattctgaatattttagagtgagaattcgtctgtaagctcacgggtcgcgtttgtctaccatttgatttgtccgttgtagcaagataatttgacattaaattggaggcttggagctaagtccaagacttgtttttttcttttgggggcactatgagacaagagctgttacttattattacccataatcatcacctgagctttgtctttggcctgtagtttttacatcacaagattattattttttacttctgcctgattccttgcttatacagcagaagagtgtctagcatggtccatctgttctgaaatttagaatcctgcacttattttactgttaaatcttcagaactaaatcattcgtttcttctgtaacttgaagacagtaaagatgattctgtctgtactgttttaccctgaaaaaaagtgtgactttggaagtccaatgcagtacaacccctggtgtgtgttcatagcactagcctcacacactcacactccatactgtgtactgaactgaatttagtttagttgtcaagtccgttcacttactgcaagttgaaggtagtagggccaaggattaatattcctcactctcttgccttctcagccctcttttgggagaaaaagaatgctggtgctaccgaacaaatgtgtagtgtagcgtatttgcagtggggtatttcacctgcaaaggagcatctttctgtagccttgtagctttcactcccctttctttgtaaagatatttcaggtttccagataaatagatgcatctcatgctctgtttggttttcagtagcttgcagttgttgcctgtggcttctgagtggccagtttttgtggttgtattcaaccagtttcaacattcatgactgctgttgcacttcattagcttatgcctaagctcccttttgctgcatgatttgattgcatataatcattctgcattgtttctgcagcttctgaactttgggaaacttgtcagacagcagggttgattcaggtcatcttcttgcttggaatgtgctcatcaccaaatgtcgattcttgtacagtattaggtaatttctgcaatgttacatgactcaaatacctggtttcttcaagtcagaactgacctgttacattttccttctccaatgtttttccacatgttgaactcagaagttctgatccaagcatgacgggttcttgaaagttgaaactacacaaaggctttggagacatgggatgtgctgcttccaggttagaagatgaggaggctgtcaagatgtgccgggacaggagggacttcatcaagcaggcgctggagcagcggaaccgcttcgcgtcgtctcactttgcctacattgagtccttgaggcgcgtctcgatggcgctccagtggttcgttgctggggatgatcaccatgagctcatatttgaccccttcatttctcccttgaagcaacagaagccagagctgcttggcctcccttatggttcatatgagaagaggacaattcatgtctcaaagtacctgaggtcaggaccaaacccatcggtatcagttgaagagcaaccgagacccgtggaaacaatccgtattgagtcacattaccccacagataactttggtggcatggacaggttcttcgcagcgcaatcctcgccaatgaggccatcttcttactacacaccaccttatgacaggccaaattatccacctccatcaccccaggagccagtgaggaactcttattacatgtcctatgacaggccaagctatccagctgcatcaccccaggagccaacaaggacttcttattacgcgtcgtatgataggccaagctacccacctccgtcgcctcaggagcaggaatcatcacagtgggacttcttctggaacccattctcatcgctggacagctttgcgtatccgcgacctcggagtagctatgacaatgtggtcaccgacgatgaattggcacgattacagcgtgtaagagaggaggaaggaatcccggaacttgaagaagaagatgatgagtgtcaacaacatgaacaggtgcaccagaaagaggaacaagtggatgacgatgacaatgatgattctgatgatgacgacgatgatgacgatgacgatgacgatgatggcgacgatgaatgtgatcattcagatgagagatgtatgccttctaatgggggtgcttgccctgtgaagactgaggtcaatggcaagcaggaaacaaagggctttgaatccaaaggagttcagtgtgaaccgcgtaacaaagtagaacttgagatcaaggcgcataagaaagaactgatgaggaacaaagtagcaaatgcagaagaaacacctggtttcacagtgtatctgaaccgcagaccagcaagtctggctgaagccatgaaggatattgacagtcagttcttggggatctgcgatgctgcaaaggaaatctcagtgatgttggaggcaagtagagctcaatactcaacctcaaacgatctttctggtactaattttacaaaccaatactggaattacttaaaactatttcagatctaactcactcgacttactaatgaatttaataatgcagcaaagatgctaaacccagtcgcattattgcggtctgcatcatcccggtcatcgtcttcccgcttccttcttgctcccacaagctcaatagaggacctctatgacaatgagacaaacagctgttactctgaagaatcctgcagtacaatgtctggaagtcatcactccactctagatagactgtatacatgggagaagaaattatacaaagaagtaaaggtacaatctccaccaggaactaataccagaagatcaatagaagtgagtagtgggaatcatgctttgtttttgtcacttgtaggcaggcgaacgattaagaattgactatgagaaaaggctgaaccatttgaggaaccaggatgtgaaaggcgacgagccttcctccgtcgataagacccgtgcagcattgagaagtttacatactcggatgaaggtgtcaatacacacagttcagtcaatatcagcgaggattgaagttctaagagacgaggagatgcaacctcagcttatggagttgatccgagggtacgtttctgtagtttattgttcagttttggtgtcctacatagtgagagtagaaacacaataatgcgcatatattaactattgaaatgggatccataatttgatcaacagagtaaataaccagttacaattgtttcagctattaggatctcagatataggatgcgtaggtaatgtgatcattgtgatgaaataggcatgcagaagtaggtatgcacaactggaggtgttctgttcctgtaaatgaatgtaaagcaatctactatttacaagagagaggggggggggggggggggactgcatacagataaactcaacaagaacatgtttgcaacaaattcttcagttatgtaacacaacacaagttgaattcgaaagagttactttttttttcccatcagcatgctattaaatcgtacaaacataattaaacagaaacataaacagatgcagcaaaaaaggctgacattcttaatcatactgtcttagacgggtacaaaagccatcttttaccatcatcactgtgagcaggaattatagccctgctcttttcattgttttagcttaaccagattgtgtaggatccatcaaaagtttgaatttgatcaattcaactctcagaaatggcaaatgcagcgacttataacaaaatgaaaagaagatattttccccccttgttgcatcactgtgatcttgaacattggacatgtcttggcattacgcaggttgtcacggatgtggcgcaccatggccgaacgccacaaggctcagaagcgcaccatcgacgacgccaagctcctcttcctccagcgccaccccacggccgccgctgccaccgccaccgccatcgccctgagcgccccggacgccgcgacgccgcccccggccgccgtggcgctcgagtgcgagatccgggcgtggcgcggcgcactcgagacgtggctgtcggcgcagcgcgcctacgcgcgcgccctcgccgcgtgggcgcgccgctgcctcggcatcggcggcgccggcgccggcggcaccgccgccgccgcgctgccgctggcgttcgcggtgtgcatggagtgggggcacgcggtcgacgcggcgtcggaggcgcgggtgatggacgggctggacttcttcgtcgccggcgtcgggtcggtgtgctcgggcgtggccactggcatggagggcatggccgggcgcgtgctctgcgccggcatggccgcggtgaccggcgccatggccgagttcgccgacgcgtcggcggacggctacgacgcgctggtgtcggcggtggccgccggcgcgccgggacgccggaaagaggaaccgacatgtgggccccaggtgtcatagaatggctcaaaaaaaatttgcctaaacttgagttggattctgcagttgcctaaaaaattgcctagtcttagtcctgtaatgaagaatgatttgcatcgctgatttactgtagctggtgattattgacttgaggagaagtattagttagagggtttaattaccatggtgattatgttcttgggtgtgattcttctgtcagtgagaggaaacttctgatattgttttgtaagtaagtatgaggttaacaggtaaaaagggtgtactggttaatgtttttccttgaagaggggagtgagtactgttttagttgattttgttaggtgctggtctgttttaggttgaatgaaatgtaaattactcatgagctatctggcagaaactgtagcagtatcaattagttgatttaatccagcaagctactgcactactaattgtttccttcacctcttgccaaaagacctactcccccctaaaaataaaaaataaactcaaccaagaagaggctgttgattcctcctattataaaaatctagacgtgggagatatcacattctcgtttaaattgagtttttttagatggacaaagtatgctacatcataaatcacatgtacctaggctctttttatttctttttctgatttcagatttgggatgttggtttgcatgttttccgatattttgaacggtgtgtttttttaaaaaaaaaatcttagaataacttttttaactaattaattcatttgctatacccttaaatagctattgtatcataaaaaaaagctgattattctctctgtttcataatgcaagactttctaacattacctatatatatttagatgttaatgaatctaaacacatacatatatctagattcattaacatctagatgaatatgagcaatgctagaaactcttatattgtgaaacggaaaaagtactcatcaattttaactatctcaaataatgtcattagtagtgccatcacaatacacggtgctatatggatgatgtattgatttattcagcataaccggtggcttcgttggctttgttgattaatttgcaccgttttataattagacttgcttcagtactcctcgtatataacttaaattgattggaaggcgtgaattactccctccgtttcaaaatatttgacaccattgactttttagcacatgtttaaccgttcgtcttattcaaaaacttttgtgaaatatgtaaaattatatgcctacataaaaatatatttaacaatgaatcaaaatgataggaaaagaattaataattacttaatttttttaataagacgaacggtcaaacatgtgctaaaaagtcaacggcgttaaatattttgaaacggagcgagtatttacgtactcaaatatgacaacatgtggtaatgaagaaactgccgaatgcatttcataacatttaagtggaaacatcgtaagattgtctacagtacagtttgagaacgagtcaagcagtttccatgcaaaaggagtagagtaccttcccttcacgtatcttccaaaacgtatacgtctaactacagcaacacaagacaaggtcaacacagtttaaataacatcatcgcttaggagagacgatttactaacagaaccacggaaactacacaaagaaaatgagaacaactacctattttttttaagaacacgaacaaatatctctatatcgagtataactttatttgtttgaaaaaaatcaatttccaattcctacaataacaccaaaaaattattactattcgccgatgagattggggcaaccgtccatatcgttaggcggtggctctcagttttaccttggttaaaaagcaactgttttttaaaattgacctgaccaatataattatagttagataaagcatgttatccaaccttcatgattcccccaattgttatatattgcagcccataatgatattattatttgtaacataaattaaaaaagaaaaccagttagccaaacgaaattattagaaccaactgtttataaatatagttaaagttttatcatttgatattcttgaaaaaacagataagtacaacttaattatacctatttatttacatattttgatgtaaataaagaaaaaaaaataagaatgtacttatgaactacaaataaaaggtgtgaaaccccagtacacgacaccagcaccagctgtagcgagggcttcgctcaactcgacttgactcaagcgacgccaccacccctctcccctcggacgcagctcctctaccttacgtcggagggattacgatagataagtacaactttattagatataatttatttactcatttcaatttaaataaactaaaaaaaaagagagaatatacttccgagctattactccagtaaaaccccagaagattagcctagcagagagcgtagcactcgcactgcacgccaccacaccaccgcagctcacctctcaagtctcaagtctcaagtcgactcgactcgagcggcgccgccacccctcgcctctgctcttctcctcttctcttttcctcctctttcgcttttgcttctccaaacccttgcctctctctctctctctctctctctttctctctctctctctctcctcctcctcctccgccggagaccacgggcctcaccctgctgctccgagctccccctccggcggcggcgaacatccacggtctggctctaggctgctgctcctcctggggtggggtggggtgtggcctcgtcggccggcgagcaggttcggaggagatagccaggaggcggccgggtggaatcgggctgaaggtatttgttcctctctccaagccctagcccttctcctccgcgccacctcgtgagccggcgcggtgtagattggagatataatggataaaaattccttcttggattgatttttattactgctccgtttaccccatccggtttcgtcccaatcccctttctgaggagcaacgacttcggtgcaagtttccttttttttttcttcctttcTtttttttttttgggttggctaggggttcagcttaaccccctcattccacacgttacgttcgcctgtggctggtggactgcaacatgtagcctattagtattatgtataaccttttattgtgctactaaaaatcttcatttttacgattagccagttccaccaaatcacaagttttccttactgcctcatttgtatccttttgggaggtcctgaggttgtgtagcttaatgtttttatttatccacagttgtttctttaccctattcaagaagtataattgggaacttgtttgcttgcaccaatctaatattgttacctaatgcattatcgaacctagtaaattctgaatagccagacttggaaagtagcaaagtggggaatggaaattgcaaatgtattcgatggatgaacactgaatattcagtttctctttgcagtgtgatggctacagagagcgctgtccggttaattggaggaacggggtctggtaactggagcaaggacttcggtgcatttgactcatcactgggtagtctttcaggagaaggtctggggtttgtggacaataacagtggcgtttatgggggctggagggagtctgtcccaaatcgcagtggaagtgcgccgcctagcatggaagggtctcttgctgctcttggtcatatgataggtcagcagagtgggaacttggaagccactttaggggggaagctgggaaacgtagcggacagttccaaatctgaggagcagctacgtgctgatccggcatactgtgactattatggctccaaggtcaatttgaacccaaggcttccgccaccacttatgtctagggagagcagacgcttcatgaaccgggttggcaaagttaaagaatggagagtggtttctcaagatgacagcaacaaaggttccttgtttattcctcgatctactctgtcaacacacagagaagagcctgaggacgataggtcaccaaggttggattcaagttcagcagaggatgcccaaggttctggtaaaagtggatccaactttgatagccattatacttgtatgaatcttggagattttgcatcggtgagtgctcctcatgatccaaacctctcctgctcccctgatgtctcacataaaaatatttatgtattttatcgtcctatgttttgatttcacaaagtatcttccaaaattgctaatgaaccactaccaatgtcacccagtctttcaacttgagttcgaggatgatatgacactattttggtgagaaaatattaaggtttcccattttatggggaactgatcactctaatcttagtgcatatctatatactactttgaatattggtagtggccaatgttcactatatgaatcaaatacaatatggataatttatatcaattgttcctcgctacgagcaactgtgtagctcacatacatgtacaaaattgtaccaagtatgatatgatgattagagtgggaatacttttattttgccttttgggctttattgtaaatcctattgcaacacaggggtatttagctagtatttgagaacaagagaaaggcgatgtgacagtcaaactatcagtagtaaagtacaatatccaaattgccaaatcacttacatctatataattatcgtaaatctacagttaattgcctcaatcttctagttcaaaaatgatcatgaatttctctgctattattgtacataccatacaaaaagtgttgaagatgtttgcagtgttctatttctaagctgccatacagtgttttatatctgccacatgttgcatgggtttggagtgtccaaaccagttagtgttaagttgttaactcacagcaaattttgcagcaggcagcaaataattatgacattttcatcagctattttgcttttctgaaagtcactagcctaaccagccctacttaaaccttggaatttcctttgctattttgctatagttcaagagcttgtcaagattccttataactgatcaaagttcaatttggcattccttctttgcggagtggagttctgtagtgtctttagttatttaccatctatagtataataactctgttatgtgttacaggatgctaccaattgtgctaatctgtattagaacatcgttggtggttgaatatttcatgtcatggacaactctacttttctgttatatctctaaggtcataatgtttaattagttaatctatgaaactgtaaaataaataaaaggaggtattttattaaaatccatagtcattctcatatgcaccctaccaaagtcactagtgtacaatggcatgataaattgttgagcttgggatttgaccaaatcgtatttggttgtttcttttgataatgaattattgatttctttcctgtcttcacttgcaaatgaagtttgaagtattgctttgatttattttcatgcatattatagttgatattctcatcatctgttttatatctttttaggagagttttcagcagaaagccgcttctttgtatgacagttctactcatccatcaaatagcaatactggtgatggtatatctgaccattctgacattaactcatcaacgaatttttcaattgatgctgtcaagacatctgggttgaattcatggacacctgttcctgtgactaacacagtgagaagtacacatagcaacagtatttcatctacatctgttcccagttcatcaagtcctgataacaaccccagtatgcaaacttctcagcaagagaagcctagcatagacatcaagcatgggaatgatgtgcctggcagcggttctattctgactgaactagatactgtgaactccaatatgaagaatctgaggataagtttggatagccatgataccatacatgttaagcagcagtggccggacaatgtcttgcagcagtttggcccctcacctttagtccagggtgatcctattcaaatgattcctcaaggaacacatcttccccatgttccttttgttgagaacttgtcgcatactcaattaaaattaccaactggtgacatgcagcaatttttaccaccgcctggtatgacaacacctttttatgcaccaaattcttttggaagcccttactatcaaaatttgcatccggctagtgtattgccaacaccatttggaactgctggatatgctttgagtggttcagctttaccacctgttatgactagctatgctccccaggtttctgttgctacacctgttgacagccctattactccaagctttagtggtagaccatctggttttccttcaccagggaatcttagtgcaggagcagaatttgttcagccatataaaatgtatggacaacaacttggggttaccatgcagccatccgttcctgacccaaacttctttcagttctttcagcatccttctttactttcatatgctggtataaatcaatacaatacaatgggaccaagggttagtgttgttgggaatcctgctgatagttttgatccccaaaaggtattatcccagcctgcgtatccatctgatcagaggcttcaacttccaagaactggaatttataactctcctgcagccagaagaggaggggccgctccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagcccagtgtttcagggacagactttcactggagtattttctcctggtaggagaaatgattctgtgagattccaaactccctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcgatgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttgaactatctgatattgcaggccatatagtagaatacaggttagtctcgaggtgttccttttagttgttctgtcttagacatgtctactcatatacaacttttggtcattaattcctgatgtattttttacctcagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctgaagagaaggcatctgtgttttcagaagttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaaggtatgctgctgtaagagttaatatgtcaatgcctattgtctgtggtaaaaatcatgtgttgcatgttgtggtctagtcacttcatcttacataactatgctttgtgaccaataacaactctgagttttatcatatctgaagaaatgacatataatatctgcagttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgttttacctttgagccttcaaatgtatggatgccgagtaattcaaaaggtaatctttacctttttcttattttatctttcctaaaatcaagaatgcttttgaatactttgatggcaactataaaaatattggactgtgggtatgcggttcttttttttatagcagatttttgggtttatctgtggaaaactttaaacttaaataactggttggacaataccatagaatacatgggttagcgatagatggtttcaggttgtctatgactgtgtgcctttgctagctatacttctgatcttgaaaggtgtattacttattggctattgcctattgatttgaagttctgatgtagcttatttagaTtttttttaacatcgattatatgcagagtattaaaggttactatcaaccttacattaaccatctagctctactgaatgttccataggtcctcagccttttgaacttgagaactttgaagagaactaaaatattttagaaattaagaaatgtctttaagagagtagaagtactcagttgtacacgagaaacaagtggtacacgagattagaagtactcggttgtacacgagatacataagggtatccatgttctatatctgtgtatgcaatcattacagtattttggggaaattttgcctggggaattcaaaataaactacttttgtatgcctagaaatagctattttatgtcctcctgcaagtattgtgtggacctggcgaatgttcattggcatgacatggatgcacatacatgcaacactgcgacgagaatacgagatgcagcttagtaccatctatgatctgttaccagtactatatttacctaacttgtattttaaaacatgtaggctcttgaagttatggaacttgaccaaaaaatagaactagttcgtgagcttgatggaaacattatgcgatgtgtccgtgatcaaaatgggaaccatgttatacagaagtgcattgaatgtgttcctacagaacatattggctttgtagtatctgcttttcgggggcaggtggccagcctttcaatgcacccatatggttgccgtgttattcaggtaatttcagaataatatttgagatgtgttctgtgctagagcttggtggccagctttctcattaatctttatcctacttggtagagagttttggagcactgcggtggtgattcacaaggccagtgcataatagatgagatactggagtcggcttgcgtcctcgcacaagatcagtatggcaactatgttacacaggtaaatttgtctacaagctgatgcaatacttgctgcccaaattcctatttccttggcagtacccatcacaactgcggaataataccctgtcaatcagtcaatcctgccttgctgaaatatgataatttcaaacagtttcttgactagtaaatgatcagactgtgtgtaacagacgtagaatgcattgcatgttatgaagtgtgttggctcatttgttggcagttagcactgaaatctacatgcatatttttagtgaatgatgctataatgaagtgactgaactcaattttatgtcatcttgtattcttacttgtcagctcgttgtttttcctttctcttttgtagcatgttttggaaagaggaaggggacatgaaaggacccaaattatcagtaaattggctgggcaggttgttaccatgagtcaaaacaaattcgcatcaaatgtgatagagaagtgctttcaacatggggatatgacagagcgagatcttctgatccgggagattgtgaagcagactgagggcaatgataacttgctggtatgtttgagaagttgatactgtaaatcaaatattttcattcagttctctccctccctctctcaggcacagggagcaaagcctgaattagcgggataaccagtatgcagtagcatcccgtgtttttagcatccacgaaaaaattagataaaaaccgatatactattcactatatctaatatagcatctcttagattccacaatattctttcctgcggttttcgtacgaattgatttgctaacaaccttttacacatttaggcgatgatgaaggaccagtatgcaaactatgtagttcagaagatacttgaaacatgcaacgagcaacagagagagctcctgctcagccgtgtgaagggccatctgcaagcattaaggaagtacacctatggcaagcatattgtgagccgagttgagcaactttgtggtgaaggtgatcatcctcttctactttttacttctaactgcatcctctctttggttttcttcaaccttcaagtgcaacattcaagtgactctatttatgctttgatactttcaggagacaccgagtcagattcttgaaaaattagcatatttcttcactggaggtgtatgcctggagccctcaagatgaacaacctccagtgcttccagaagggctaacaaaactcttgtctccttcagattgtacataagtgactctcattaggtggtagcctaggtgctagatacagtttagtggtgtgcatcagtgtatctatgttaggggtttgcttatttatagaatcaataatggtactgtaatagttgggtagctgtttgcaaaagaagatttagtggcttgtatgcgataaattatcgactgcttggtaatgtaatcgcttgcttagtggcttgaatcgcagctgtgcgccaatttgatgtgtccaatcatgtgatattgtgatgcatatatttgctagat
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| CDS seq | atgggatgtgctgcttccaggttagaagatgaggaggctgtcaagatgtgccgggacaggagggacttcatcaagcaggcgctggagcagcggaaccgcttcgcgtcgtctcactttgcctacattgagtccttgaggcgcgtctcgatggcgctccagtggttcgttgctggggatgatcaccatgagctcatatttgaccccttcatttctcccttgaagcaacagaagccagagctgcttggcctcccttatggttcatatgagaagaggacaattcatgtctcaaagtacctgaggtcaggaccaaacccatcggtatcagttgaagagcaaccgagacccgtggaaacaatccgtattgagtcacattaccccacagataactttggtggcatggacaggttcttcgcagcgcaatcctcgccaatgaggccatcttcttactacacaccaccttatgacaggccaaattatccacctccatcaccccaggagccagtgaggaactcttattacatgtcctatgacaggccaagctatccagctgcatcaccccaggagccaacaaggacttcttattacgcgtcgtatgataggccaagctacccacctccgtcgcctcaggagcaggaatcatcacagtgggacttcttctggaacccattctcatcgctggacagctttgcgtatccgcgacctcggagtagctatgacaatgtggtcaccgacgatgaattggcacgattacagcgtgtaagagaggaggaaggaatcccggaacttgaagaagaagatgatgagtgtcaacaacatgaacaggtgcaccagaaagaggaacaagtggatgacgatgacaatgatgattctgatgatgacgacgatgatgacgatgacgatgacgatgatggcgacgatgaatgtgatcattcagatgagagatgtatgccttctaatgggggtgcttgccctgtgaagactgaggtcaatggcaagcaggaaacaaagggctttgaatccaaaggagttcagtgtgaaccgcgtaacaaagtagaacttgagatcaaggcgcataagaaagaactgatgaggaacaaagtagcaaatgcagaagaaacacctggtttcacagtgtatctgaaccgcagaccagcaagtctggctgaagccatgaaggatattgacagtcagttcttggggatctgcgatgctgcaaaggaaatctcagtgatgttggaggcaagtagagctcaatactcaacctcaaacgatctttctgcaaagatgctaaacccagtcgcattattgcggtctgcatcatcccggtcatcgtcttcccgcttccttcttgctcccacaagctcaatagaggacctctatgacaatgagacaaacagctgttactctgaagaatcctgcagtacaatgtctggaagtcatcactccactctagatagactgtatacatgggagaagaaattatacaaagaagtaaaggcaggcgaacgattaagaattgactatgagaaaaggctgaaccatttgaggaaccaggatgtgaaaggcgacgagccttcctccgtcgataagacccgtgcagcattgagaagtttacatactcggatgaaggtgtcaatacacacagttcagtcaatatcagcgaggattgaagttctaagagacgaggagatgcaacctcagcttatggagttgatccgagggttgtcacggatgtggcgcaccatggccgaacgccacaaggctcagaagcgcaccatcgacgacgccaagctcctcttcctccagcgccaccccacggccgccgctgccaccgccaccgccatcgccctgagcgccccggacgccgcgacgccgcccccggccgccgtggcgctcgagtgcgagatccgggcgtggcgcggcgcactcgagacgtggctgtcggcgcagcgcgcctacgcgcgcgccctcgccgcgtgggcgcgccgctgcctcggcatcggcggcgccggcgccggcggcaccgccgccgccgcgctgccgctggcgttcgcggtgtgcatggagtgggggcacgcggtcgacgcggcgtcggaggcgcgggtgatggacgggctggacttcttcgtcgccggcgtcgggtcggtgtgctcgggcgtggccactggcatggagggcatggccgggcgcgtgctctgcgccggcatggccgcggtgaccggcgccatggccgagttcgccgacgcgtcggcggacggctacgacgcgctggtgtcggcggtggccgccggcgcgccgggacgccggaaagaggaaccgacatgtgggccccagaagattagcctagcagagagcgtagcactcgcactgcacgccaccacaccaccgcagctcacctctcaagtctcaagtctcaagtcgactcgactcgagcggcgccgccacccctcgcctctgctcttctcctcttctcttttcctcctctttcgcttttgcttctccaaacccttgcctctctctctctctctctctctctttctctctctctctctctcctcctcctcctccgccggagaccacgggcctcaccctgctgctccgagctccccctccggcggcggcgaacatccacggtctggctctaggctgctgctcctcctggggtggggtggggtgtggcctcgtcggccggcgagcaggttcggaggagatagccaggaggcggccgggtggaatcgggctgaagagagcgctgtccggttaattggaggaacggggtctggtaactggagcaaggacttcggtgcatttgactcatcactgggtagtctttcaggagaaggtctggggtttgtggacaataacagtggcgtttatgggggctggagggagtctgtcccaaatcgcagtggaagtgcgccgcctagcatggaagggtctcttgctgctcttggtcatatgataggtcagcagagtgggaacttggaagccactttaggggggaagctgggaaacgtagcggacagttccaaatctgaggagcagctacgtgctgatccggcatactgtgactattatggctccaaggtcaatttgaacccaaggcttccgccaccacttatgtctagggagagcagacgcttcatgaaccgggttggcaaagttaaagaatggagagtggtttctcaagatgacagcaacaaaggttccttgtttattcctcgatctactctgtcaacacacagagaagagcctgaggacgataggtcaccaaggttggattcaagttcagcagaggatgcccaaggttctggtaaaagtggatccaactttgatagccattatacttgtatgaatcttggagattttgcatcggagagttttcagcagaaagccgcttctttgtatgacagttctactcatccatcaaatagcaatactggtgatggtatatctgaccattctgacattaactcatcaacgaatttttcaattgatgctgtcaagacatctgggttgaattcatggacacctgttcctgtgactaacacagtgagaagtacacatagcaacagtatttcatctacatctgttcccagttcatcaagtcctgataacaaccccagtatgcaaacttctcagcaagagaagcctagcatagacatcaagcatgggaatgatgtgcctggcagcggttctattctgactgaactagatactgtgaactccaatatgaagaatctgaggataagtttggatagccatgataccatacatgttaagcagcagtggccggacaatgtcttgcagcagtttggcccctcacctttagtccagggtgatcctattcaaatgattcctcaaggaacacatcttccccatgttccttttgttgagaacttgtcgcatactcaattaaaattaccaactggtgacatgcagcaatttttaccaccgcctggtatgacaacacctttttatgcaccaaattcttttggaagcccttactatcaaaatttgcatccggctagtgtattgccaacaccatttggaactgctggatatgctttgagtggttcagctttaccacctgttatgactagctatgctccccaggtttctgttgctacacctgttgacagccctattactccaagctttagtggtagaccatctggttttccttcaccagggaatcttagtgcaggagcagaatttgttcagccatataaaatgtatggacaacaacttggggttaccatgcagccatccgttcctgacccaaacttctttcagttctttcagcatccttctttactttcatatgctggtataaatcaatacaatacaatgggaccaagggttagtgttgttgggaatcctgctgatagttttgatccccaaaaggtattatcccagcctgcgtatccatctgatcagaggcttcaacttccaagaactggaatttataactctcctgcagccagaagaggaggggccgctccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagcccagtgtttcagggacagactttcactggagtattttctcctggtaggagaaatgattctgtgagattccaaactccctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcgatgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttgaactatctgatattgcaggccatatagtagaatacagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctgaagagaaggcatctgtgttttcagaagttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaagttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgttttacctttgagccttcaaatgtatggatgccgagtaattcaaaaggctcttgaagttatggaacttgaccaaaaaatagaactagttcgtgagcttgatggaaacattatgcgatgtgtccgtgatcaaaatgggaaccatgttatacagaagtgcattgaatgtgttcctacagaacatattggctttgtagtatctgcttttcgggggcaggtggccagcctttcaatgcacccatatggttgccgtgttattcagagagttttggagcactgcggtggtgattcacaaggccagtgcataatagatgagatactggagtcggcttgcgtcctcgcacaagatcagtatggcaactatgttacacagcatgttttggaaagaggaaggggacatgaaaggacccaaattatcagtaaattggctgggcaggttgttaccatgagtcaaaacaaattcgcatcaaatgtgatagagaagtgctttcaacatggggatatgacagagcgagatcttctgatccgggagattgtgaagcagactgagggcaatgataacttgctggcgatgatgaaggaccagtatgcaaactatgtagttcagaagatacttgaaacatgcaacgagcaacagagagagctcctgctcagccgtgtgaagggccatctgcaagcattaaggaagtacacctatggcaagcatattgtgagccgagttgagcaactttgtggtgaaggagacaccgagtcagattcttga
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| Protein seq | MGCAASRLEDEEAVKMCRDRRDFIKQALEQRNRFASSHFAYIESLRRVSMALQWFVAGDDHHELIFDPFISPLKQQKPELLGLPYGSYEKRTIHVSKYLRSGPNPSVSVEEQPRPVETIRIESHYPTDNFGGMDRFFAAQSSPMRPSSYYTPPYDRPNYPPPSPQEPVRNSYYMSYDRPSYPAASPQEPTRTSYYASYDRPSYPPPSPQEQESSQWDFFWNPFSSLDSFAYPRPRSSYDNVVTDDELARLQRVREEEGIPELEEEDDECQQHEQVHQKEEQVDDDDNDDSDDDDDDDDDDDDDGDDECDHSDERCMPSNGGACPVKTEVNGKQETKGFESKGVQCEPRNKVELEIKAHKKELMRNKVANAEETPGFTVYLNRRPASLAEAMKDIDSQFLGICDAAKEISVMLEASRAQYSTSNDLSAKMLNPVALLRSASSRSSSSRFLLAPTSSIEDLYDNETNSCYSEESCSTMSGSHHSTLDRLYTWEKKLYKEVKAGERLRIDYEKRLNHLRNQDVKGDEPSSVDKTRAALRSLHTRMKVSIHTVQSISARIEVLRDEEMQPQLMELIRGLSRMWRTMAERHKAQKRTIDDAKLLFLQRHPTAAAATATAIALSAPDAATPPPAAVALECEIRAWRGALETWLSAQRAYARALAAWARRCLGIGGAGAGGTAAAALPLAFAVCMEWGHAVDAASEARVMDGLDFFVAGVGSVCSGVATGMEGMAGRVLCAGMAAVTGAMAEFADASADGYDALVSAVAAGAPGRRKEEPTCGPQKISLAESVALALHATTPPQLTSQVSSLKSTRLERRRHPSPLLFSSSLFLLFRFCFSKPLPLSLSLSLFLSLSLSSSSSAGDHGPHPAAPSSPSGGGEHPRSGSRLLLLLGWGGVWPRRPASRFGGDSQEAAGWNRAEESAVRLIGGTGSGNWSKDFGAFDSSLGSLSGEGLGFVDNNSGVYGGWRESVPNRSGSAPPSMEGSLAALGHMIGQQSGNLEATLGGKLGNVADSSKSEEQLRADPAYCDYYGSKVNLNPRLPPPLMSRESRRFMNRVGKVKEWRVVSQDDSNKGSLFIPRSTLSTHREEPEDDRSPRLDSSSAEDAQGSGKSGSNFDSHYTCMNLGDFASESFQQKAASLYDSSTHPSNSNTGDGISDHSDINSSTNFSIDAVKTSGLNSWTPVPVTNTVRSTHSNSISSTSVPSSSSPDNNPSMQTSQQEKPSIDIKHGNDVPGSGSILTELDTVNSNMKNLRISLDSHDTIHVKQQWPDNVLQQFGPSPLVQGDPIQMIPQGTHLPHVPFVENLSHTQLKLPTGDMQQFLPPPGMTTPFYAPNSFGSPYYQNLHPASVLPTPFGTAGYALSGSALPPVMTSYAPQVSVATPVDSPITPSFSGRPSGFPSPGNLSAGAEFVQPYKMYGQQLGVTMQPSVPDPNFFQFFQHPSLLSYAGINQYNTMGPRVSVVGNPADSFDPQKVLSQPAYPSDQRLQLPRTGIYNSPAARRGGAAPNYQGMTPYVGAPMTYPTSPVFQGQTFTGVFSPGRRNDSVRFQTPSRNMTAYSGVQGQREREKFDDPKACSFLEELKSNRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQRELLLSRVKGHLQALRKYTYGKHIVSRVEQLCGEGDTESDS |
||||||||||
| Function | Pumilio homolog 5 [UniProtKB/Swiss-Prot:Q9LJX4] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_08g0022280 | OsKeNa_08g0022280.02 | Chr08 | 26987378 | 27002651 | + | NAM | ||
| CDS seq | atgggatgtgctgcttccaggttagaagatgaggaggctgtcaagatgtgccgggacaggagggacttcatcaagcaggcgctggagcagcggaaccgcttcgcgtcgtctcactttgcctacattgagtccttgaggcgcgtctcgatggcgctccagtggttcgttgctggggatgatcaccatgagctcatatttgaccccttcatttctcccttgaagcaacagaagccagagctgcttggcctcccttatggttcatatgagaagaggacaattcatgtctcaaagtacctgaggtcaggaccaaacccatcggtatcagttgaagagcaaccgagacccgtggaaacaatccgtattgagtcacattaccccacagataactttggtggcatggacaggttcttcgcagcgcaatcctcgccaatgaggccatcttcttactacacaccaccttatgacaggccaaattatccacctccatcaccccaggagccagtgaggaactcttattacatgtcctatgacaggccaagctatccagctgcatcaccccaggagccaacaaggacttcttattacgcgtcgtatgataggccaagctacccacctccgtcgcctcaggagcaggaatcatcacagtgggacttcttctggaacccattctcatcgctggacagctttgcgtatccgcgacctcggagtagctatgacaatgtggtcaccgacgatgaattggcacgattacagcgtgtaagagaggaggaaggaatcccggaacttgaagaagaagatgatgagtgtcaacaacatgaacaggtgcaccagaaagaggaacaagtggatgacgatgacaatgatgattctgatgatgacgacgatgatgacgatgacgatgacgatgatggcgacgatgaatgtgatcattcagatgagagatgtatgccttctaatgggggtgcttgccctgtgaagactgaggtcaatggcaagcaggaaacaaagggctttgaatccaaaggagttcagtgtgaaccgcgtaacaaagtagaacttgagatcaaggcgcataagaaagaactgatgaggaacaaagtagcaaatgcagaagaaacacctggtttcacagtgtatctgaaccgcagaccagcaagtctggctgaagccatgaaggatattgacagtcagttcttggggatctgcgatgctgcaaaggaaatctcagtgatgttggaggcaagtagagctcaatactcaacctcaaacgatctttctgcaaagatgctaaacccagtcgcattattgcggtctgcatcatcccggtcatcgtcttcccgcttccttcttgctcccacaagctcaatagaggacctctatgacaatgagacaaacagctgttactctgaagaatcctgcagtacaatgtctggaagtcatcactccactctagatagactgtatacatgggagaagaaattatacaaagaagtaaaggcaggcgaacgattaagaattgactatgagaaaaggctgaaccatttgaggaaccaggatgtgaaaggcgacgagccttcctccgtcgataagacccgtgcagcattgagaagtttacatactcggatgaaggtgtcaatacacacagttcagtcaatatcagcgaggattgaagttctaagagacgaggagatgcaacctcagcttatggagttgatccgagggttgtcacggatgtggcgcaccatggccgaacgccacaaggctcagaagcgcaccatcgacgacgccaagctcctcttcctccagcgccaccccacggccgccgctgccaccgccaccgccatcgccctgagcgccccggacgccgcgacgccgcccccggccgccgtggcgctcgagtgcgagatccgggcgtggcgcggcgcactcgagacgtggctgtcggcgcagcgcgcctacgcgcgcgccctcgccgcgtgggcgcgccgctgcctcggcatcggcggcgccggcgccggcggcaccgccgccgccgcgctgccgctggcgttcgcggtgtgcatggagtgggggcacgcggtcgacgcggcgtcggaggcgcgggtgatggacgggctggacttcttcgtcgccggcgtcgggtcggtgtgctcgggcgtggccactggcatggagggcatggccgggcgcgtgctctgcgccggcatggccgcggtgaccggcgccatggccgagttcgccgacgcgtcggcggacggctacgacgcgctggtgtcggcggtggccgccggcgcgccgggacgccggaaagaggaaccgacatgtgggccccagaagattagcctagcagagagcgtagcactcgcactgcacgccaccacaccaccgcagctcacctctcaagtctcaagtctcaagtcgactcgactcgagcggcgccgccacccctcgcctctgctcttctcctcttctcttttcctcctctttcgcttttgcttctccaaacccttgcctctctctctctctctctctctctttctctctctctctctctcctcctcctcctccgccggagaccacgggcctcaccctgctgctccgagctccccctccggcggcggcgaacatccacggtctggctctaggctgctgctcctcctggggtggggtggggtgtggcctcgtcggccggcgagcaggttcggaggagatagccaggaggcggccgggtggaatcgggctgaagagagcgctgtccggttaattggaggaacggggtctggtaactggagcaaggacttcggtgcatttgactcatcactgggtagtctttcaggagaaggtctggggtttgtggacaataacagtggcgtttatgggggctggagggagtctgtcccaaatcgcagtggaagtgcgccgcctagcatggaagggtctcttgctgctcttggtcatatgataggtcagcagagtgggaacttggaagccactttaggggggaagctgggaaacgtagcggacagttccaaatctgaggagcagctacgtgctgatccggcatactgtgactattatggctccaaggtcaatttgaacccaaggcttccgccaccacttatgtctagggagagcagacgcttcatgaaccgggttggcaaagttaaagaatggagagtggtttctcaagatgacagcaacaaaggttccttgtttattcctcgatctactctgtcaacacacagagaagagcctgaggacgataggtcaccaaggttggattcaagttcagcagaggatgcccaaggttctggtaaaagtggatccaactttgatagccattatacttgtatgaatcttggagattttgcatcggagagttttcagcagaaagccgcttctttgtatgacagttctactcatccatcaaatagcaatactggtgatggtatatctgaccattctgacattaactcatcaacgaatttttcaattgatgctgtcaagacatctgggttgaattcatggacacctgttcctgtgactaacacagtgagaagtacacatagcaacagtatttcatctacatctgttcccagttcatcaagtcctgataacaaccccagtatgcaaacttctcagcaagagaagcctagcatagacatcaagcatgggaatgatgtgcctggcagcggttctattctgactgaactagatactgtgaactccaatatgaagaatctgaggataagtttggatagccatgataccatacatgttaagcagcagtggccggacaatgtcttgcagcagtttggcccctcacctttagtccagggtgatcctattcaaatgattcctcaaggaacacatcttccccatgttccttttgttgagaacttgtcgcatactcaattaaaattaccaactggtgacatgcagcaatttttaccaccgcctggtatgacaacacctttttatgcaccaaattcttttggaagcccttactatcaaaatttgcatccggctagtgtattgccaacaccatttggaactgctggatatgctttgagtggttcagctttaccacctgttatgactagctatgctccccaggtttctgttgctacacctgttgacagccctattactccaagctttagtggtagaccatctggttttccttcaccagggaatcttagtgcaggagcagaatttgttcagccatataaaatgtatggacaacaacttggggttaccatgcagccatccgttcctgacccaaacttctttcagttctttcagcatccttctttactttcatatgctggtataaatcaatacaatacaatgggaccaagggttagtgttgttgggaatcctgctgatagttttgatccccaaaaggtattatcccagcctgcgtatccatctgatcagaggcttcaacttccaagaactggaatttataactctcctgcagccagaagaggaggggccgctccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagcccagtgtttcagggacagactttcactggagtattttctcctggtaggagaaatgattctgtgagattccaaactccctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcgatgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttgaactatctgatattgcaggccatatagtagaatacagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctgaagagaaggcatctgtgttttcagaagttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaagttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgttttacctttgagccttcaaatgtatggatgccgagtaattcaaaaggctcttgaagttatggaacttgaccaaaaaatagaactagttcgtgagcttgatggaaacattatgcgatgtgtccgtgatcaaaatgggaaccatgttatacagaagtgcattgaatgtgttcctacagaacatattggctttgtagtatctgcttttcgggggcaggtggccagcctttcaatgcacccatatggttgccgtgttattcagagagttttggagcactgcggtggtgattcacaaggccagtgcataatagatgagatactggagtcggcttgcgtcctcgcacaagatcagtatggcaactatgttacacagcatgttttggaaagaggaaggggacatgaaaggacccaaattatcagtaaattggctgggcaggttgttaccatgagtcaaaacaaattcgcatcaaatgtgatagagaagtgctttcaacatggggatatgacagagcgagatcttctgatccgggagattgtgaagcagactgagggcaatgataacttgctggcgatgatgaaggaccagtatgcaaactatgtagttcagaagatacttgaaacatgcaacgagcaacagagagagctcctgctcagccgtgtgaagggccatctgcaagcattaaggaagtacacctatggcaagcatattgtgagccgagttgagcaactttgtggtgaaggagacaccgagtcagattcttga
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| Protein seq | MGCAASRLEDEEAVKMCRDRRDFIKQALEQRNRFASSHFAYIESLRRVSMALQWFVAGDDHHELIFDPFISPLKQQKPELLGLPYGSYEKRTIHVSKYLRSGPNPSVSVEEQPRPVETIRIESHYPTDNFGGMDRFFAAQSSPMRPSSYYTPPYDRPNYPPPSPQEPVRNSYYMSYDRPSYPAASPQEPTRTSYYASYDRPSYPPPSPQEQESSQWDFFWNPFSSLDSFAYPRPRSSYDNVVTDDELARLQRVREEEGIPELEEEDDECQQHEQVHQKEEQVDDDDNDDSDDDDDDDDDDDDDGDDECDHSDERCMPSNGGACPVKTEVNGKQETKGFESKGVQCEPRNKVELEIKAHKKELMRNKVANAEETPGFTVYLNRRPASLAEAMKDIDSQFLGICDAAKEISVMLEASRAQYSTSNDLSAKMLNPVALLRSASSRSSSSRFLLAPTSSIEDLYDNETNSCYSEESCSTMSGSHHSTLDRLYTWEKKLYKEVKAGERLRIDYEKRLNHLRNQDVKGDEPSSVDKTRAALRSLHTRMKVSIHTVQSISARIEVLRDEEMQPQLMELIRGLSRMWRTMAERHKAQKRTIDDAKLLFLQRHPTAAAATATAIALSAPDAATPPPAAVALECEIRAWRGALETWLSAQRAYARALAAWARRCLGIGGAGAGGTAAAALPLAFAVCMEWGHAVDAASEARVMDGLDFFVAGVGSVCSGVATGMEGMAGRVLCAGMAAVTGAMAEFADASADGYDALVSAVAAGAPGRRKEEPTCGPQKISLAESVALALHATTPPQLTSQVSSLKSTRLERRRHPSPLLFSSSLFLLFRFCFSKPLPLSLSLSLFLSLSLSSSSSAGDHGPHPAAPSSPSGGGEHPRSGSRLLLLLGWGGVWPRRPASRFGGDSQEAAGWNRAEESAVRLIGGTGSGNWSKDFGAFDSSLGSLSGEGLGFVDNNSGVYGGWRESVPNRSGSAPPSMEGSLAALGHMIGQQSGNLEATLGGKLGNVADSSKSEEQLRADPAYCDYYGSKVNLNPRLPPPLMSRESRRFMNRVGKVKEWRVVSQDDSNKGSLFIPRSTLSTHREEPEDDRSPRLDSSSAEDAQGSGKSGSNFDSHYTCMNLGDFASESFQQKAASLYDSSTHPSNSNTGDGISDHSDINSSTNFSIDAVKTSGLNSWTPVPVTNTVRSTHSNSISSTSVPSSSSPDNNPSMQTSQQEKPSIDIKHGNDVPGSGSILTELDTVNSNMKNLRISLDSHDTIHVKQQWPDNVLQQFGPSPLVQGDPIQMIPQGTHLPHVPFVENLSHTQLKLPTGDMQQFLPPPGMTTPFYAPNSFGSPYYQNLHPASVLPTPFGTAGYALSGSALPPVMTSYAPQVSVATPVDSPITPSFSGRPSGFPSPGNLSAGAEFVQPYKMYGQQLGVTMQPSVPDPNFFQFFQHPSLLSYAGINQYNTMGPRVSVVGNPADSFDPQKVLSQPAYPSDQRLQLPRTGIYNSPAARRGGAAPNYQGMTPYVGAPMTYPTSPVFQGQTFTGVFSPGRRNDSVRFQTPSRNMTAYSGVQGQREREKFDDPKACSFLEELKSNRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQRELLLSRVKGHLQALRKYTYGKHIVSRVEQLCGEGDTESDS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_08g0022280 | OsKeNa_08g0022280.01 | Chr08 | 26987303 | 27002651 | + | NAM | ||
| CDS seq | atgggatgtgctgcttccaggttagaagatgaggaggctgtcaagatgtgccgggacaggagggacttcatcaagcaggcgctggagcagcggaaccgcttcgcgtcgtctcactttgcctacattgagtccttgaggcgcgtctcgatggcgctccagtggttcgttgctggggatgatcaccatgagctcatatttgaccccttcatttctcccttgaagcaacagaagccagagctgcttggcctcccttatggttcatatgagaagaggacaattcatgtctcaaagtacctgaggtcaggaccaaacccatcggtatcagttgaagagcaaccgagacccgtggaaacaatccgtattgagtcacattaccccacagataactttggtggcatggacaggttcttcgcagcgcaatcctcgccaatgaggccatcttcttactacacaccaccttatgacaggccaaattatccacctccatcaccccaggagccagtgaggaactcttattacatgtcctatgacaggccaagctatccagctgcatcaccccaggagccaacaaggacttcttattacgcgtcgtatgataggccaagctacccacctccgtcgcctcaggagcaggaatcatcacagtgggacttcttctggaacccattctcatcgctggacagctttgcgtatccgcgacctcggagtagctatgacaatgtggtcaccgacgatgaattggcacgattacagcgtgtaagagaggaggaaggaatcccggaacttgaagaagaagatgatgagtgtcaacaacatgaacaggtgcaccagaaagaggaacaagtggatgacgatgacaatgatgattctgatgatgacgacgatgatgacgatgacgatgacgatgatggcgacgatgaatgtgatcattcagatgagagatgtatgccttctaatgggggtgcttgccctgtgaagactgaggtcaatggcaagcaggaaacaaagggctttgaatccaaaggagttcagtgtgaaccgcgtaacaaagtagaacttgagatcaaggcgcataagaaagaactgatgaggaacaaagtagcaaatgcagaagaaacacctggtttcacagtgtatctgaaccgcagaccagcaagtctggctgaagccatgaaggatattgacagtcagttcttggggatctgcgatgctgcaaaggaaatctcagtgatgttggaggcaagtagagctcaatactcaacctcaaacgatctttctgcaaagatgctaaacccagtcgcattattgcggtctgcatcatcccggtcatcgtcttcccgcttccttcttgctcccacaagctcaatagaggacctctatgacaatgagacaaacagctgttactctgaagaatcctgcagtacaatgtctggaagtcatcactccactctagatagactgtatacatgggagaagaaattatacaaagaagtaaaggcaggcgaacgattaagaattgactatgagaaaaggctgaaccatttgaggaaccaggatgtgaaaggcgacgagccttcctccgtcgataagacccgtgcagcattgagaagtttacatactcggatgaaggtgtcaatacacacagttcagtcaatatcagcgaggattgaagttctaagagacgaggagatgcaacctcagcttatggagttgatccgagggttgtcacggatgtggcgcaccatggccgaacgccacaaggctcagaagcgcaccatcgacgacgccaagctcctcttcctccagcgccaccccacggccgccgctgccaccgccaccgccatcgccctgagcgccccggacgccgcgacgccgcccccggccgccgtggcgctcgagtgcgagatccgggcgtggcgcggcgcactcgagacgtggctgtcggcgcagcgcgcctacgcgcgcgccctcgccgcgtgggcgcgccgctgcctcggcatcggcggcgccggcgccggcggcaccgccgccgccgcgctgccgctggcgttcgcggtgtgcatggagtgggggcacgcggtcgacgcggcgtcggaggcgcgggtgatggacgggctggacttcttcgtcgccggcgtcgggtcggtgtgctcgggcgtggccactggcatggagggcatggccgggcgcgtgctctgcgccggcatggccgcggtgaccggcgccatggccgagttcgccgacgcgtcggcggacggctacgacgcgctggtgtcggcggtggccgccggcgcgccgggacgccggaaagaggaaccgacatgtgggccccagaagattagcctagcagagagcgtagcactcgcactgcacgccaccacaccaccgcagctcacctctcaagtctcaagtctcaagtcgactcgactcgagcggcgccgccacccctcgcctctgctcttctcctcttctcttttcctcctctttcgcttttgcttctccaaacccttgcctctctctctctctctctctctctttctctctctctctctctcctcctcctcctccgccggagaccacgggcctcaccctgctgctccgagctccccctccggcggcggcgaacatccacggtctggctctaggctgctgctcctcctggggtggggtggggtgtggcctcgtcggccggcgagcaggttcggaggagatagccaggaggcggccgggtggaatcgggctgaagagagcgctgtccggttaattggaggaacggggtctggtaactggagcaaggacttcggtgcatttgactcatcactgggtagtctttcaggagaaggtctggggtttgtggacaataacagtggcgtttatgggggctggagggagtctgtcccaaatcgcagtggaagtgcgccgcctagcatggaagggtctcttgctgctcttggtcatatgataggtcagcagagtgggaacttggaagccactttaggggggaagctgggaaacgtagcggacagttccaaatctgaggagcagctacgtgctgatccggcatactgtgactattatggctccaaggtcaatttgaacccaaggcttccgccaccacttatgtctagggagagcagacgcttcatgaaccgggttggcaaagttaaagaatggagagtggtttctcaagatgacagcaacaaaggttccttgtttattcctcgatctactctgtcaacacacagagaagagcctgaggacgataggtcaccaaggttggattcaagttcagcagaggatgcccaaggttctggtaaaagtggatccaactttgatagccattatacttgtatgaatcttggagattttgcatcgcagaaagccgcttctttgtatgacagttctactcatccatcaaatagcaatactggtgatggtatatctgaccattctgacattaactcatcaacgaatttttcaattgatgctgtcaagacatctgggttgaattcatggacacctgttcctgtgactaacacagtgagaagtacacatagcaacagtatttcatctacatctgttcccagttcatcaagtcctgataacaaccccagtatgcaaacttctcagcaagagaagcctagcatagacatcaagcatgggaatgatgtgcctggcagcggttctattctgactgaactagatactgtgaactccaatatgaagaatctgaggataagtttggatagccatgataccatacatgttaagcagcagtggccggacaatgtcttgcagcagtttggcccctcacctttagtccagggtgatcctattcaaatgattcctcaaggaacacatcttccccatgttccttttgttgagaacttgtcgcatactcaattaaaattaccaactggtgacatgcagcaatttttaccaccgcctggtatgacaacacctttttatgcaccaaattcttttggaagcccttactatcaaaatttgcatccggctagtgtattgccaacaccatttggaactgctggatatgctttgagtggttcagctttaccacctgttatgactagctatgctccccaggtttctgttgctacacctgttgacagccctattactccaagctttagtggtagaccatctggttttccttcaccagggaatcttagtgcaggagcagaatttgttcagccatataaaatgtatggacaacaacttggggttaccatgcagccatccgttcctgacccaaacttctttcagttctttcagcatccttctttactttcatatgctggtataaatcaatacaatacaatgggaccaagggttagtgttgttgggaatcctgctgatagttttgatccccaaaaggtattatcccagcctgcgtatccatctgatcagaggcttcaacttccaagaactggaatttataactctcctgcagccagaagaggaggggccgctccaaattatcaaggcatgacaccatatgttggagcaccaatgacttacccaacaagcccagtgtttcagggacagactttcactggagtattttctcctggtaggagaaatgattctgtgagattccaaactccctcaagaaatatgaccgcttattctggtgttcaagggcagcgagaaagggagaaattcgatgacccaaaggcatgttccttcctggaagaactcaagtctaacagggctcgcagggttgaactatctgatattgcaggccatatagtagaatacagcgctgaccaacatggcagccgattcatccaacagaagttagagaactgcactgctgaagagaaggcatctgtgttttcagaagttctccctcatgcttcatcattaatgactgatgtgtttgggaattatgtgatccaaaagttcttcgaacatggaactcctgaacaaaggagggatcttgccactaagcttgttggtcatgttttacctttgagccttcaaatgtatggatgccgagtaattcaaaaggctcttgaagttatggaacttgaccaaaaaatagaactagttcgtgagcttgatggaaacattatgcgatgtgtccgtgatcaaaatgggaaccatgttatacagaagtgcattgaatgtgttcctacagaacatattggctttgtagtatctgcttttcgggggcaggtggccagcctttcaatgcacccatatggttgccgtgttattcagagagttttggagcactgcggtggtgattcacaaggccagtgcataatagatgagatactggagtcggcttgcgtcctcgcacaagatcagtatggcaactatgttacacagcatgttttggaaagaggaaggggacatgaaaggacccaaattatcagtaaattggctgggcaggttgttaccatgagtcaaaacaaattcgcatcaaatgtgatagagaagtgctttcaacatggggatatgacagagcgagatcttctgatccgggagattgtgaagcagactgagggcaatgataacttgctggcgatgatgaaggaccagtatgcaaactatgtagttcagaagatacttgaaacatgcaacgagcaacagagagagctcctgctcagccgtgtgaagggccatctgcaagcattaaggaagtacacctatggcaagcatattgtgagccgagttgagcaactttgtggtgaaggagacaccgagtcagattcttga
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| Protein seq | MGCAASRLEDEEAVKMCRDRRDFIKQALEQRNRFASSHFAYIESLRRVSMALQWFVAGDDHHELIFDPFISPLKQQKPELLGLPYGSYEKRTIHVSKYLRSGPNPSVSVEEQPRPVETIRIESHYPTDNFGGMDRFFAAQSSPMRPSSYYTPPYDRPNYPPPSPQEPVRNSYYMSYDRPSYPAASPQEPTRTSYYASYDRPSYPPPSPQEQESSQWDFFWNPFSSLDSFAYPRPRSSYDNVVTDDELARLQRVREEEGIPELEEEDDECQQHEQVHQKEEQVDDDDNDDSDDDDDDDDDDDDDGDDECDHSDERCMPSNGGACPVKTEVNGKQETKGFESKGVQCEPRNKVELEIKAHKKELMRNKVANAEETPGFTVYLNRRPASLAEAMKDIDSQFLGICDAAKEISVMLEASRAQYSTSNDLSAKMLNPVALLRSASSRSSSSRFLLAPTSSIEDLYDNETNSCYSEESCSTMSGSHHSTLDRLYTWEKKLYKEVKAGERLRIDYEKRLNHLRNQDVKGDEPSSVDKTRAALRSLHTRMKVSIHTVQSISARIEVLRDEEMQPQLMELIRGLSRMWRTMAERHKAQKRTIDDAKLLFLQRHPTAAAATATAIALSAPDAATPPPAAVALECEIRAWRGALETWLSAQRAYARALAAWARRCLGIGGAGAGGTAAAALPLAFAVCMEWGHAVDAASEARVMDGLDFFVAGVGSVCSGVATGMEGMAGRVLCAGMAAVTGAMAEFADASADGYDALVSAVAAGAPGRRKEEPTCGPQKISLAESVALALHATTPPQLTSQVSSLKSTRLERRRHPSPLLFSSSLFLLFRFCFSKPLPLSLSLSLFLSLSLSSSSSAGDHGPHPAAPSSPSGGGEHPRSGSRLLLLLGWGGVWPRRPASRFGGDSQEAAGWNRAEESAVRLIGGTGSGNWSKDFGAFDSSLGSLSGEGLGFVDNNSGVYGGWRESVPNRSGSAPPSMEGSLAALGHMIGQQSGNLEATLGGKLGNVADSSKSEEQLRADPAYCDYYGSKVNLNPRLPPPLMSRESRRFMNRVGKVKEWRVVSQDDSNKGSLFIPRSTLSTHREEPEDDRSPRLDSSSAEDAQGSGKSGSNFDSHYTCMNLGDFASQKAASLYDSSTHPSNSNTGDGISDHSDINSSTNFSIDAVKTSGLNSWTPVPVTNTVRSTHSNSISSTSVPSSSSPDNNPSMQTSQQEKPSIDIKHGNDVPGSGSILTELDTVNSNMKNLRISLDSHDTIHVKQQWPDNVLQQFGPSPLVQGDPIQMIPQGTHLPHVPFVENLSHTQLKLPTGDMQQFLPPPGMTTPFYAPNSFGSPYYQNLHPASVLPTPFGTAGYALSGSALPPVMTSYAPQVSVATPVDSPITPSFSGRPSGFPSPGNLSAGAEFVQPYKMYGQQLGVTMQPSVPDPNFFQFFQHPSLLSYAGINQYNTMGPRVSVVGNPADSFDPQKVLSQPAYPSDQRLQLPRTGIYNSPAARRGGAAPNYQGMTPYVGAPMTYPTSPVFQGQTFTGVFSPGRRNDSVRFQTPSRNMTAYSGVQGQREREKFDDPKACSFLEELKSNRARRVELSDIAGHIVEYSADQHGSRFIQQKLENCTAEEKASVFSEVLPHASSLMTDVFGNYVIQKFFEHGTPEQRRDLATKLVGHVLPLSLQMYGCRVIQKALEVMELDQKIELVRELDGNIMRCVRDQNGNHVIQKCIECVPTEHIGFVVSAFRGQVASLSMHPYGCRVIQRVLEHCGGDSQGQCIIDEILESACVLAQDQYGNYVTQHVLERGRGHERTQIISKLAGQVVTMSQNKFASNVIEKCFQHGDMTERDLLIREIVKQTEGNDNLLAMMKDQYANYVVQKILETCNEQQRELLLSRVKGHLQALRKYTYGKHIVSRVEQLCGEGDTESDS
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| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_08g0022280 | OsKeNa_08g0022280.03 | Chr08 | 26994927 | 27002601 | + | IsoSeq | ||
| CDS seq | gcactcgcactgcacgccaccacaccaccgcagctcacctctcaagtctcaagtctcaagtcgactcgactcgagcggcgccgccacccctcgcctctgctcttctcctcttctcttttcctcctctttcgcttttgcttctccaaacccttgcctctctctctctctctctctctctttctctctctctctctctcctcctcctcctccgccggagaccacgggcctcaccctgctgctccgagctccccctccggcggcggcgaacatccacggtctggctctaggctgctgctcctcctggggtggggtggggtgtggcctcgtcggccggcgagcaggttcggaggagatagccaggaggcggccgggtggaatcgggctgaag
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| Protein seq | ALALHATTPPQLTSQVSSLKSTRLERRRHPSPLLFSSSLFLLFRFCFSKPLPLSLSLSLFLSLSLSSSSSAGDHGPHPAAPSSPSGGGEHPRSGSRLLLLLGWGGVWPRRPASRFGGDSQEAAGWNRAE |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
| A3 | Chr08 | 26996603 | 26998019 | + | OsKeNa_08g0022280.02,OsKeNa_08g0022280.03 | OsKeNa_08g0022280.01,OsKeNa_08g0022280.02,OsKeNa_08g0022280.03 | All |
| A3 | Chr08 | 26995315 | 26995975 | + | OsKeNa_08g0022280.03 | OsKeNa_08g0022280.01,OsKeNa_08g0022280.02,OsKeNa_08g0022280.03 | All |
| AF | Chr08 | 26987303 | 26989000 | + | OsKeNa_08g0022280.01 | OsKeNa_08g0022280.01,OsKeNa_08g0022280.02 | All |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.781428 | 2.205020 | 4.987717 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0519800 | RBH | 5.306989 | 6.603255 | 9.746448 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g40830 | RBH | 3.320730 | 4.170201 | 2.645631 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os08g0519700 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0022390 | RBH | 1.163394 | 12.724782 | 13.119102 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_09g0015300 | RBH | 0.0 | 0.739641 | 1.168166 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0022170 | RBH | 2.317076 | 8.327062 | 20.155716 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0022300 | RBH | 0.324554 | 0.258799 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0022180 | RBH | 13.726083 | 14.991720 | 36.087032 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0411900 | RBH | 8.278118 | 34.354595 | 28.997968 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0022070 | RBH | 0.711734 | 1.522435 | 3.161579 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0433300 | RBH | 8.1810795 | 65.9340705 | 28.81919 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0021420 | RBH | 0.348181 | 0.832768 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0021720 | RBH | 0.989708 | 13.037201 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0021560 | RBH | 7.852119 | 60.897316 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0022370 | RBH | 1.845961 | 1.326479 | 2.509395 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0021740 | RBH | 0.489452 | 5.190138 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G021910 | RBH | 1.570742 | 3.675454 | 5.815194 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0022070 | RBH | 3.910696 | 35.613064 | 18.483355 |
