Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKeNa_08g0015720 OGI:08058170 | 16/16 KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) Chr08:20993993-20994372
Gene Symbol -
DNA seq

ctactcgtcaccattaccggcgacccaccctcctctctccagctcccacttcatcttctcccacaccaccgtgtccagcccaactccacctgccgcgccagagttcgccgccggcgccgccggtcggaaccacatcaccccgtcgaccatctgaggccgcttcctcgcaccgcgtaggtgccgcccagcagcgccgtcgaccggcgcaccgtcacgttcaccttgacctcatcatccggctgcttgccgctgatgctgccccagtgagtgttgtcgcagctgtatatctcctcccacctctgctccagcgtcatctcgtagaacatgcaccgcttgacctgatccttgagccgctgctcgccgccgtcgttgatgaacat

CDS seq

atgttcatcaacgacggcggcgagcagcggctcaaggatcaggtcaagcggtgcatgttctacgagatgacgctggagcagaggtgggaggagatatacagctgcgacaacactcactggggcagcatcagcggcaagcagccggatgatgaggtcaaggtgaacgtgacggtgcgccggtcgacggcgctgctgggcggcacctacgcgatggtcgacggggtgatgtggttccgaccggcggcgccggcggcgaactctggcgcggcaggtggagttgggctggacacggtggtgtgggagaagatgaagtgggagctggagagaggagggtgggtcgccggtaatggtgacgagtag

Protein seq

MFINDGGEQRLKDQVKRCMFYEMTLEQRWEEIYSCDNTHWGSISGKQPDDEVKVNVTVRRSTALLGGTYAMVDGVMWFRPAAPAANSGAAGGVGLDTVVWEKMKWELERGGWVAGNGDE

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKeNa_08g0015720 OsKeNa_08g0015720.01 Chr08 20993993 20994372 - NAM
CDS seq

atgttcatcaacgacggcggcgagcagcggctcaaggatcaggtcaagcggtgcatgttctacgagatgacgctggagcagaggtgggaggagatatacagctgcgacaacactcactggggcagcatcagcggcaagcagccggatgatgaggtcaaggtgaacgtgacggtgcgccggtcgacggcgctgctgggcggcacctacgcgatggtcgacggggtgatgtggttccgaccggcggcgccggcggcgaactctggcgcggcaggtggagttgggctggacacggtggtgtgggagaagatgaagtgggagctggagagaggagggtgggtcgccggtaatggtgacgagtag

More
Protein seq

MFINDGGEQRLKDQVKRCMFYEMTLEQRWEEIYSCDNTHWGSISGKQPDDEVKVNVTVRRSTALLGGTYAMVDGVMWFRPAAPAANSGAAGGVGLDTVVWEKMKWELERGGWVAGNGDE

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.0

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_08g0413500 SBH 9.267802 6.261284 3.502996
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g31920 RBH 0.000000 0.0 0.0
Nipponbare | IRGSP 1.0 | RAP-db Os08g0413500 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_08g0015910 RBH 0.0 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_08g0015760 RBH 0.0 0.0 0.0
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_08g0015650 RBH 0.0 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_08g0015990 SBH 0.0 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0015770 RBH 0.0 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0315500 RBH 3.1370625 2.334589 1.3304675
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0015730 RBH 0.0 0.0 0.0
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0336300 SBH 0 0 0
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0015260 SBH 0.503236 0.032472 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_08g0015380 RBH 0.0 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_08g0015310 SBH 0.0 0.000000 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_08g0016020 RBH 0.0 0.0 0.0
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_08g0015410 RBH 0.0 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_08G015540 SBH 0.0 0.0 0.0
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_08g0015650 SBH 0.0 0.0 0.0
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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