Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKeNa_08g0007000 OGI:08019250 | 10/16 KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) Chr08:6777614-6789089
Gene Symbol -
DNA seq

gcgccgcacccgcgattccccatccacccacaccaccgcacgctgcctcccacaccccgcgattcccacaCcccgcgccgccgtcctcctcctgcgccgccgtcctcctcctgctgaccccgccaccgccggagcccgacctcgacgagcccgaccccgacgcctcccctcctccgacgagcccgaccccgatgcctaccctcctccgacgagcccgaccacgatgcctcctgcagatccgcgccgactccacacgccgccgtcctcctctacttctccatcgactcctcctccggccggccggcttccgctgtcggctcctccctcttccccaatgccttcccatcgctgcagttgagtccaccctcttccccacctcctccgccgcctcctcaacctccaggtttaggtaagaatcaaatccccttgtttatgagtgtgattttttttgtctcatagatggatgtgtgtgtgtttttctttttacaaccctgcctataagctgtatgtccaccctgtgatttactcaatttgtctgcatattggtgcttgcgtgatggatttggaggggaatttgtagcaattagttgcttagaaatcgagggtaactgagtgaccagcttgcttgttctttactttaacgaattttgcaccgattgcaatcagaatgtgtttcgggtgttagaattgggagaatgacaatgacagtgtaacaatgtaaatcttggtatgaatggacaatgatctgattgatctaaaaataacaactgacgacggtgaatacagtgtgctatgtaaacttcaaaagtgaatacaatggccacctgtgctttcagtatacactacattactccttgaagatatttttgtgtgattcttaaaggctctttgttctttttatttttgtgtgatattaaccgttggttcaacactgatgctgccatcaccttttgccaatttaatatagacgagccctgcagtgagcttcatagtggcactctgttcagatccattgctaagacattttaaaaccaccttactgttgaaagttagtgctactgaaagtctgaaactatggaatatattaaaatataggcatcatgtgaggtagttgtgagtctggtacgtcatgacctgtgcaaaggtaagtagtatgtgttctactagtatattttgtgaagttagtgtcggtgtcaaataatagtaatatttcatctctatctgacatcctgaacccaatcctttcaaccatgagataaagcagacatcatttggtgctttaggctttgattttattccacatcatttgtacagatattgatttgcaaattattttagcacatttgatttggaaatgggcaatcacttaactgttctagcactctttacctagattgatatcttgggagtttcttgaaattattaacgcaagcatttaattttaagtcagcattataatttgtttctaaatgtgaactatttggctttatggtgcagtttagtggtccactatcgattttgctgcaatcaacctacgttgttgagcatctacccagcaggacatctcaagaaaaacttcgtaccacggttagtatcaaccaacttgccatcagtactgtgcttaaaggctaaaatgctatatctatgtgttatgtttgttttgtgcaatgtctttttatactttttcccatgagcacaatggcatgtacttgacgcgcagaaaacaccactgaaacacataataatttaggcgacctgtgaaatttgattgtcaatatcagctatggataagagatggatggaccttcctaggtacaattctacctaataattaatgtggcgcaatgtgtttttttttccattcattcatctttctctaaactttcaaaaaaaactataggcacacatctgaatacatacaaggggtcaacgaatttatacaatatgcttttacccattcagcaaaagagaacacaatactatgcccttgcaagaagtgtgtgaatggttgttggaaggaagctagtgaaatctatgtccatttaatatgtgatgggtttttagatgggtataagacatggatatttcatgtagaggcatcgtcttcctttgctcaatatggtgaagcaccagcctcttttcctgagcaaactttgatgagattatgagacaagatagtagttcagaggaagctaatgagatgtttgatatgcttcatgatgttgctcatggattagatatggggaatttggatagaaatgacgatgacaatgtagtgatgcaaatacatcactttatctaaggtgcgaaagcttctcaaagttacgctttctagtcgaattactccacataaaacttcttggtggctggagtgataagagttttgatatgcttcttgatcttcttagagaggctttccctaagggctcaacagtacctaagagcttttatgaagctaggaaaatagtcaagtgtctttcgcttgggtatgatactattcatgcatgcgagaatgactgcgtactgtttaggaagcaatatgccaatgcagatgtctgtccaaaatgcaatacttctcacaggaaaacatccaagaaaagtcttgatgggaagcgtgtccataaagttcctagaaaagtgcttcgctattttcctattgaagagaggcttcaaaaaatgtttatgtccccaaaacttgctaatgatgtacggtggcatgatgaagggcgcacgaaggatggactattgaggcatccagctgactctccagattggaagcattttgataacacatacccagagtttgctgcagatagtcgcaatctcaggctaactttagctactgatggctttaatccatttagattaatgaactgcagttatagcatctggcctgttgtgataattccaatgaatctacctccttggcaatgtatgaagcaaccaaacttcattctttccttattaatccctggtccaaattcacctggaaagaatatggatgtctattttgaaccactagtagatgatatgcatgatatgtttgaggaaggtgtaagaacttatgattcttccaaggacgaatatttccagttgcatgctgccctacaaaaaaccatcactgattttcctgggttaggttatgtctctgcatgtgtaacttcaggaaaagtagcatgccctcattgccactcatatacttgttctattcatttgaaaaatggaggcaagtgttgttacatgggtcatcggaggttcttagatgcaaaccacaagtttaggtttgatgcagcatcattcgatggcaatgtggagttagggacagcaccgaagcctctgaccagagaagagatttttaagcaaacagaagatctacctgcagattttggaaaggacccaaagaagaaaaaaaccaaaccaaatagtaaaggcaaggaaacagaggaaaaaataatatggaataggagatctatctggtttaggttgcgatattggaaggatgtgatgcttccacataattttgatgtaatgcacattgaaaaaaatgtatgtgacaacatcatcaacacactattgggtatcgatgggaaatctaaagataatctgaatgctcgattggatcttaaacttctagatatacggaaatatttgcatcctgtcgaagttggggattcttattatttgcctcctgcacctttctcaatgagttctgaagagaagaaattgttttgtgaagttctgaaacgaatcaaatttcctgatggctatgcctctgatattcgccggcatgtacatgttaaagagaaaaggataattggtctgaaaagtcatgacaaccatatcctcttacaacacttgcttccactagcagtacgaaagacattgccagaatatgttagtgcagtattggttcgtgtgagtaacttctttaagaaaatatactcacctgttatttccataagtgatatggaaaagttagatgctgaaattgctgaaacattaagccttctagagactatatttctaccagccttttttgatattatggttcacttaatggctcatcttcctacccaagtaaggatttctggcccagttcagtacagcaacatgtatccaatagaaaggtaatattcaaaaacaaactatgagtattgtataactacacacacacacacacacacacacatatatatatatatataatgtgaatataatctgctgttgtattaattctatgtaggtttctaatgaggttaaagggatatgtacgcaccaagagtcatcctgagggatcaattgctgaaggctatttgtttgatgagagtcttacattttgctctcgttatttagaaggatgtgaaactaggttctctcgaaaatccagaactagtatagataaaccaagctcaattaccatgccattcttctacaacaacattggtcgggatttgtctggaaagtgcatggtgaccttagactacatggctccaagcacatagatatgtcttatttaattatgatcatatagagccatacttgaggtaggctatgctaactatctcactattatagtctgctggttcttttcactttaaacactaaaattatatttaaccttgcataaaacatcatgattacttatcgtcacttggttatagaaacaacagtgaaatcagtcgtattcactatgagaagtttcatgaatggtttggctttcatgtggcagagttattaagaaatggtgaggaggtttctgaagagattcaaactttagctaatggacctttggtagtagcaactaaatacaacagtacacactagtatagatcctatcatctgtgacgggctcaattatgcctggactacttgggccgtcagaacgaagtcatctcaatcgggcctaaatttgcaccgttgtaaatgtactcactctaggcccaagtgcatatagcctgtcacggatgacactcatctgtgacgggcaaagatttagacccgattgagataacctcgcatatctcaatcgggcccagacgccgagcccgtcagtgatgagggtcatcggtgacgggctacaaatatggcccgattgagataactttaaagcctgtcaccgatgactcatatcggtatcgggcttttgttgatgcccgttagagataacttttatttaggttatttttctatataacttttttgaatagtttgagtttgaatttgaaaatatgacaacttcaaacaatatttttaaatactaaataatttcaaatgaaaaaattatcaacaataaagttgtataacataccaatatttacaacttttatttttattttggttatttttctatataacattttttttgaacagtttgaatttgaatttgaaaatatgacaacttcaaaacaacattttcaaatactaaatgatttgaactaaaaaagtcatcaacaacaaagttgtataactcatcaacatctataacttttattttggtcatttttctatataacgtttttttaacggtttgaatttaaatttgaaaatatgataacttgaaacaatatttttgaatactaaatgatttcaactgaaaaagtcatcaacaacaaagttgtataactcatcaatatctataacttttattttgttcatttttctgtacaacatttatttaaacagtttgaatttgaatttcaaaatatgacaatttcaaacaacattttcaaatactaaatgatttcaactgaaaaagtcatcaacaacaaagttctataattcatcaagatctataacttttattttggtcattttttcatccgacaaagtgttagtaacattgttcacaaaaattacgtatctgtgttatagtttataaaactagatgagagatatgtgaattttgtgaacaatgttactattactttatcggatgaagaaatgaccaaaataaaagttatagatcttgatgagttatacaactttgttgttgatgacgttttcaattgaaatcatttagtatttgaaaatgttgtttgaagttgtcatattttcaaattcaaattcaaactgtttaaaaaaatgttgtatagaaaaatgaacaaaataaaagttatagatattgatgagttatacaactttgttgttgatgactttttcacttgaaatcatttagtatttgaaaatattgtttgaagttgttatatttttaaattcaaattcaaactgttcaaaaaatgttatataggaaaaagaccaaagtaaaagttataaatcttgatgagttatacaactttgttgttgacaattttaccatttgaaatcatttactactcgaaaaaaatatttgaatttcttatattttaaaatataaattttatatagttcaatcaaactcggatggagaaatgaccaaaataaaaatggtagatctcaatgagttctacaactttgtttttgatagctttttcatatgagttcatttagtatcataaaattcaattcgaaatttattttttcctagaagtctgatttgcctcctactcatgataatacttgctaaatatatatttgattcaattaaattggatttgctggtgaaatatgtgatcaaaatggatgttatgtgaatgtggttgtgttatgtgaataaatgtatatgaatagggaggtgtgacatcctagcctagggcttaataggattaatagaatactcataccaacaaattacaatttctttctcgaaaactagtctacgaagaactatgaggttaagcgtgcttggtctagagcaattcccggatgggtgaccaaccagaaaatttgtcccggatgcacactagggagggcaaaggcctgaggctaaaaaaaagcaaaattaattttttttGggttatactcatatgtgacaggctataatctaggcccgttagagatgagagtcatccgtgacgtgctataatctaggcccgttagagatgagagtcatccgtgatgggcttttgtgttggcccgattgagatgtgtcatccgtgatggccggatgcccgattgagatattttcccacatcactgacctttggttagtgacggggggcaaaggcccgaggctaaaaaaaagcaaaattaatttttttgtgggttatactcatatgtgacaggctataatctaggcccgttagagatgagagtcatccgtgatgggcttttgtgttggcccgattgagatgtgtcatccgtgacggccggatgcccgattgagatattttcccacatcactgacctttggttagtgacgggggccctgcccaaaagagatgatgcattaagcccgttagagataaccaatcccgttccagtgacactattaatggtcatatttttcacaccaagtcctatgatgagggtaggtctgtccaatgtagtggagtgactctagttgctcaaacctcttccaaatctgctggaaataataatccaatggtggaaaataagacctattatggtgctataactgaaatccttgaattggactataagcacaagggaaatattgctctcttcaaatgtgagtgggttgacaatcgtgtacaggacaagtggattaaggtcgataagttgggaaccacaaatgttaatctcaagcatttatttaatactggtagcaagctgtccgatgagccttttattttggcctctcaagcagtccaagtatactatgttgaagacccaagtgacaatggttggagtgctgttattgagacAaaaccaagagacttctatgatatggctaaagtacaaactgaaagttctgatcacgaaagtgaacatgtacaatgtcctgattttggtggcagcaacattactcctgatcaaacatatgtgtctcccgttagatcagatattgatggaataattgttaatgcaactgaaaagagaaagtatgtcatttcaccttcttctcaaatgctatcgtttacttttctcatgttttacataattgctagcttgtttaatagacctgctattacttcacattgtgaaataagatactaaactattgtatttttctacaggaaaaataatggcaagagaaagaggaaatgagaatactacctaccttaatgaatatgaaagagggagagcagaaagaattaagaaaaacaatatagcactacaagctataattcaaaagagaagggagttggctaaatcaagcgagggaaatctcgggtctgcttctactcatcaggaaacaagaaagaggaaggttaggaattctaacatgtcaattgcttgatatcgtattacatgctaactgcttaggaagaaaaatctattcatcttcttgtagagagtcgattgcgctggaagtgaaccagctagacatgaatctgggttgccaaatctgtctagatcaacaaggaggggaacagggagtagtacaagtacacacgatgaagatgaagaacttgttgctaatacaaatcatctattcatgcacgattgcgaaagaaatgatgagcttgcagaaaatggaggtatatttattgcaaagttccatatctccgccttagcttttaattacaacgtatctaattctgttttatttctatatagttgatgctataaatgatggacaacaagtatcttttactttgctcttgttttacagaattgctagctttttttattggggaaattgcacaaatgccactagggtttaccgtatttctcattctgccactggtttttggtacagctgcagctgcagcaatgtgtacatccaattatttccatcaatggctaaagctgcagcaagttgacctttattttttccaactaaatgtgtactgtccatggcaatatagggcctgcagcccagtaggaacccatcaatacaaggtttgggagctgtaaataaccttctgaagcacatctgaccattatgctctacaggaaaaagaatggcaaatggaggaggaaatgagaatacaacctacgtgaatgaatatgaaagattgagagcagaaagaatcaagaaaaacaatatagcgctacaagctgtcattgaaaagaaaaaggagttggctaacttaagcgaggaaaatcttgggtctgcctctactcatcaggaaacaagaaagaggaaggttagaaattctaacatgtcaattgcatgatattgtattacatgttaactgcttagaaagaaaaaatattcatcttcttgtagaaagccgcttgcactagtagtgagccagccatactaccgcttgcactagtaatggccttgtatcagaagacgcagaagctaccgttataagtaTttttttttaaaaaaaaagcatttggaatcaattgaggaactagttaatatatatatacacacacacacacacacacacacatatacatatatatatatatacatacatatatacatatacatatatacatatacatatatatatacatatatatatatatctgtatatatgtttaaatttatagaaggcacttgaggacgcagttgaggaacatccggagtggacagaaaaaagcataactgaaggggaccttatgtcacgtgtatgtgggcctgaaaggaatggatttgttcgctcagtggggaagggaccaacacctagagatttggagatgcctggaaaggagaagtatagatcaaccaaggtccaaatggctattgaaggtcagaaacaagctcaactggagaaagaagctctaatagaacattttgaaagaaggcagacacaaagtgatagaaaaattgagtcacttagtgagaaagtggaaaggttgactgaattacttcttgctgattctcgagatggacgacaagtgcatgttaatccccaagtcttgtcaaattctgcaacaaatgaggtatataatgcaatgaataatttctattatagattatcagtgcttgtttctgttttcattattttgggacaactcatttttgtaggatgaacaagagagtgcaaatggcgaagctcagccgagtgatgaggaaaacaattcctatggaatggtatgtacaataagcctacactgaaaatgaatattgtcccttctccatagtacagtatataatgtgatctatgcacatgcagatacctccaagacctgcagctccttcaccgcaagaacacatggtgataacctctgttatttttcTtttttcacttctgtttcacacaattcttgtgcatcactacaatgaaacactcacatgttgtaggctggaaaagaagttatcttatactcgtttattagacccccatgatactcctgttgcaaagggtaccctgctgtcagcaaatcggatgactgtagtgagtggcactcaattgggtcctgattgttgtgaagttgtggtgaatcacgtgctgaaaagggctgctccattccttcgtccgtatggtaacatgaactacatttctgatgctgttggaaggtctattgcatggccacgacaacatgtaatcatccatctgactgtctattgtttgaaattcactttgattttcttgtctcagttatgtacttgcatatgttataatctgtagataaaggaacaacaaaagtctctagcacaacctgaaggtagccgtgttcgtggtaagtatatgaattctgttaactatgtggcttgcctcatgcatatttggattgatgtgatgctggatatgagtggcttgcatagaataatatagtttctgaaccttaccacaaggtcacttaattttaggactgcagcctatgattgtttgtcaaattaaccacatggactagtatagttacctagaacattttatccaacatgaaaccttttgggaggttatgttgtcatgtgctacagagacaagggcaacagagacaagggcatatggagctagaaccattatgttgtcattttgtttctttgatcctagccagtttgcatggtcttgtcagtttgtgataagaatgtatttatattatgatagatagttctttatattctacatgcaagattgctcacagattccaaactattatttttaggtcaaaatcggaagggctactgaaattgttctgctaaagggttacttgtCccagaaattgtccattgaagattttttgctgaagttatttctgaatgaagacctgctaaagatatcacttgtcccaacaacaaagacctacaaaagacccattgtgtatttatattagaatttgaaagagatgtcacttaaagttaatgaatgctaagaattatctgtactcatatgcatatgctctatgctctatgcagaggcatgtaaatattgctcctaggtgcaacataattgttactcatgaatttgttattgctgaaactgtggtatggaaccctacaatgcaatgttttctgcagtgtgttgatgtatctgtgcaatctgaaatttttgcaatctgtgcagcctga

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CDS seq

atggcaagagaaagaggaaatgagaatactacctaccttaatgaatatgaaagagggagagcagaaagaattaagaaaaacaatatagcactacaagctataattcaaaagagaagggagttggctaaatcaagcgagggaaatctcgggtctgcttctactcatcaggaaacaagaaagaggaagagagtcgattgcgctggaagtgaaccagctagacatgaatctgggttgccaaatctgtctagatcaacaaggaggggaacagggagtagtacaagtacacacgatgaagatgaagaacttgttgctaatacaaatcatctattcatgcacgattgcgaaagaaatgatgagcttgcagaaaatggagcgctacaagctgtcattgaaaagaaaaaggagttggctaacttaagcgaggaaaatcttgggtctgcctctactcatcaggaaacaagaaagaggaaggatgaacaagagagtgcaaatggcgaagctcagccgagtgatgaggaaaacaattcctatggaatgatacctccaagacctgcagctccttcaccgcaagaacacatgaggcatgtaaatattgctcctaggtgcaacataattgttactcatgaatttgttattgctgaaactgtggtatggaaccctacaatgcaatgttttctgcagtgtgttgatgtatctgtgcaatctgaaatttttgcaatctgtgcagcctga

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Protein seq

MARERGNENTTYLNEYERGRAERIKKNNIALQAIIQKRRELAKSSEGNLGSASTHQETRKRKRVDCAGSEPARHESGLPNLSRSTRRGTGSSTSTHDEDEELVANTNHLFMHDCERNDELAENGALQAVIEKKKELANLSEENLGSASTHQETRKRKDEQESANGEAQPSDEENNSYGMIPPRPAAPSPQEHMRHVNIAPRCNIIVTHEFVIAETVVWNPTMQCFLQCVDVSVQSEIFAICAA

Function -

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKeNa_08g0007000 OsKeNa_08g0007000.01 Chr08 6777614 6789089 + NAM
CDS seq

atggcaagagaaagaggaaatgagaatactacctaccttaatgaatatgaaagagggagagcagaaagaattaagaaaaacaatatagcactacaagctataattcaaaagagaagggagttggctaaatcaagcgagggaaatctcgggtctgcttctactcatcaggaaacaagaaagaggaagagagtcgattgcgctggaagtgaaccagctagacatgaatctgggttgccaaatctgtctagatcaacaaggaggggaacagggagtagtacaagtacacacgatgaagatgaagaacttgttgctaatacaaatcatctattcatgcacgattgcgaaagaaatgatgagcttgcagaaaatggagcgctacaagctgtcattgaaaagaaaaaggagttggctaacttaagcgaggaaaatcttgggtctgcctctactcatcaggaaacaagaaagaggaaggatgaacaagagagtgcaaatggcgaagctcagccgagtgatgaggaaaacaattcctatggaatgatacctccaagacctgcagctccttcaccgcaagaacacatgaggcatgtaaatattgctcctaggtgcaacataattgttactcatgaatttgttattgctgaaactgtggtatggaaccctacaatgcaatgttttctgcagtgtgttgatgtatctgtgcaatctgaaatttttgcaatctgtgcagcctga

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Protein seq

MARERGNENTTYLNEYERGRAERIKKNNIALQAIIQKRRELAKSSEGNLGSASTHQETRKRKRVDCAGSEPARHESGLPNLSRSTRRGTGSSTSTHDEDEELVANTNHLFMHDCERNDELAENGALQAVIEKKKELANLSEENLGSASTHQETRKRKDEQESANGEAQPSDEENNSYGMIPPRPAAPSPQEHMRHVNIAPRCNIIVTHEFVIAETVVWNPTMQCFLQCVDVSVQSEIFAICAA

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Gene Transcript Chromosome Start End Strand Source
OsKeNa_08g0007000 OsKeNa_08g0007000.02 Chr08 6786691 6789045 + IsoSeq
CDS seq

atggatttgttcgctcagtggggaagggaccaacacctagagatttggagatgcctggaaaggagaagtatagatcaaccaaggtccaaatggctattgaaggtcagaaacaagctcaactggagaaagaag

Protein seq

MDLFAQWGRDQHLEIWRCLERRSIDQPRSKWLLKVRNKLNWRKK

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
SE Chr08 6786765 6787605 + OsKeNa_08g0007000.02 OsKeNa_08g0007000.01,OsKeNa_08g0007000.02 All

Expression

Leaf Root Panicle
FPKM 1.588899 7.233455 6.134221

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) NA NA NA NA NA
Nipponbare | IRGSP 1.0 | MSU LOC_Os08g11480 RBH 2.669766 2.938215 1.106385
Nipponbare | IRGSP 1.0 | RAP-db NA NA NA NA NA
Azucena | AzucenaRS1 | Gramene(+IsoSeq) NA NA NA NA NA
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) NA NA NA NA NA
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) NA NA NA NA NA
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_08g0007030 RBH 14.961460 19.998011 49.869961
Minghui 63 | MH63RS3 | HZAU OsMH63_08G0108800 RBH 1.2326125 1.502744 3.356231
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_08g0006900 RBH 0.183666 0.000000 1.215345
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_08G0104100 RBH 3.3329515 9.9625235 6.735686
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_08g0006680 RBH 0.655259 0.695744 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) NA NA NA NA NA
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LIU XU | Os125827RS1 | Gramene(+IsoSeq) NA NA NA NA NA
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) NA NA NA NA NA
N22 | OsN22RS2 | Gramene(+IsoSeq) NA NA NA NA NA
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) NA NA NA NA NA
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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