Basic Info |
Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
OsKeNa_08g0004830 | OGI:08010570 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr08:4220599-4227316 | ||||||||
Gene Symbol | - | ||||||||||
DNA seq | aatacaaacactatcattgacatggttattcatgaaaagaatatattgtcattggaattattcacccgttgcaacgcacgggcatttttactagcataaaaaatagtaaaatgtatagacggttcttaaacttgtagggttgtgtcatctaggtttccaaactatcaaaatgcagatccaggtcccagaaacttgtcaaagtgtatcatctagatcctaaatcgacacaacccctctagaattctacatgacacaatatgacaagttctgaaacctgagtatgcattttaagagtctaaggatttagatgatacacctttacaagtttaaggaccgcccttgcactttaatttttttaaaaaaatacatggactcgagatagtagagtcaaaagtaattgactgaacataccacaagtttaaaccagatcaactagtcatgaactcaaggtgagtgtcatacatgatgctgttatgatcgatcactcttctgtgcgtcatgattctcacgatggcagcatcgatctgcagcggcttcctgttctgatcagacaggcaggattccttccgtgccaccactttagtctgtgagaatcttgacttgaacaacatgatagtattgcttcaggcctagagatagtattgcagcaagacaaaagacaattgtcagttctgggaaccaaagtgtcatcccacttgagtcggtgacaaatcctctgtaaccaattttttttttctaactttgaatctagacaaatcttatccagattcataactaaaaattgactctcttttttttcacatagggagtagggattagagagaaactaggctagggtgcataccttctggtgttggtcagacaacaccatcatatcttcaccgtatctcgtcagtttaagtgtcggacggttggcatggacgtccactgcgaatctcacatccgcctctgctttctccacctcctccagacttgcattcgcacaattaatggagacactgaatttcttgacgcatggattacgcttgagcatccaacagatgtcagagcgaagatgagcgcttttcctcttccgcacattgacattttcaacaactactttaggaaataagccgctatgctgtgaaagagataataagatggaatgtgtaagccaagccaatcaagtagcctgatggaataataatgaaaaacaattattggagccagaagtaactgaaagttgaaaattacacaaaagtagggatcgatcgatcaaatgttgatgcaagtacgtacctcttcgtaaggggagagcatctcgtcctcccaaagcctcgtggtatgaagggtaagacggtttggatggacagtggcggcgtgtgctaacgccgcctccacttgctcgacttccgcgggacggcccccacgacagttgattctaacttggactctttggagtgaatttgttccgagatgggcaaagctaagcagcttttcaaaaccaggtaggattcgcacatagacactgaactcgagaactttgagatttggcatgacagcattctgataaaacaggacacacatattgggtgctataagaaatctcaactcctgaaagtagccatcgccgggaattatcttgtcgccactgactagtactatcccgtcgtattccgtatgcagcttgaggtagcggagctttggtaacctcccaagtgcttccatgtcctgcccatccaaaacatgcactctcaagttaagataggagaggttcacaagaagcgacgagttcatccacaccggcattctgtgaaacctcaacgacgtcaagcacaggtatcggaggcgttgaggggaagcgaatcctgattcccacgcgacgcccactctttggtaaaattggccctcaatctccacgtcgagaagcttgtgcagattgcatagggactccagcaaagatgatgttccatcggcaagcccatccagatagagactagtttggagcatcctcaattccttcagcttacccaggaccttcacaaactgccacctatcatccttacgaggcttcatcctcagctcctgcagggatgtcagcttcccgatcgcactaggcgacacccttgcatcaaaatcaacacgcaggcacagcagtttcgtcatctggcctactgattccggcagatctcgtatattagaatactgcacatcaagtactagtagcaacttcaaattcccgacatcctctgggagcgaactagaatcaactttttgtagactgaggtatctaaggtgaagtaaacttccaacatgccgcagattaatttcactttctgtgatcaaattattacgattttctgtttctaacacacggagaacctggaagcttggtaatttcttgttaatatcagaggcagagcactcattcgtaacaaaggtccttagttgcttcaactccatatcagccagccgatgcccactctcttttaaaccccaataattatgcagaactagtctgcgaacattgttcctttcaatttcacgttcccaactggcattcgctatagtgacaaagttctctttagctgacaataagcacattatatcaagcatgatatcgtgaacacggcaaccatttacacaacctgagtattcatcctccactggctggatcagacttctgtttatcagctcgttgaagtatccctccccaatttcaaataaccctatgtcagcttcttgtttctcctgtatgaaaccctcagctacccacctccatattaacatttttttctcaatgtaataatcttctggaaatatgcttagatataataaacaaggcctcagatgcaaaggcaaattgtagtagctcaaacacattatccttggagtatgatgcatgtctgcgtgctcaagatcatcaaacgatatcatcatttcggaccagcactcacgtggtttgttggctaataaactagctgatgtaatgataactaacggcacaccgccacattttttcagaattatgtcacatgccacagctgatggagtagggagagacccactttgatcaccaagtattcttgtatatagtaactttcttgactcatcataagaaagcggtttcatcttgtaaacgtcaccaccggcatgtctggcaatttcataaatacgagtagttatgagtactctacttctgcatttactgccttgtagagcacatctgattacagcccatgaacttctatcccatatgtcatccacgacaataaaacagctataaatccacatcacagtgaaagggccatgagtaagtaactaaaagaattaaaattaatgaagaacatgtgaaatcaatgtgttgatttaatctatttgataaacaaatttcaaaagtaaatgtttattgaaaatacggtgaataatgttttcggtcgaggaacaatgaagccggcactgggtcgccaatcagaccgggtgctgcacgccggttagactagaggtatccggacggtctgaccggttagctcgatggtcagatcggcagactccgggttggagttggtttcgggtaaggttattttcgtggattttctagattgcttcatggatatgacttctagatattttctattcgtatgtgatactattgtgtactgatgtgagtcaagttggtgcgaatttgtatttggatatggagTtttttttgttgttcatgtgcaggtgtagcttgaggctacggaagtatagttggtgatggatcgagactagtcttggagaagttgaggtccatatggtcaaggatatcacgtgggatgctcagactagagaacaatacacatggaggtgaaggtttccatatggcatccaagtggtgttgtgtgcgtatggaaaaatgagttaaatttggattgatggaggtgaaggtttccatatggcatccaagtagtgttgtgtgcatatggaaaaatgagttaaatttggattgaagtcgaagtttggaaagattagagtgtggagttatatgaggatgttgtttctctggtttgataggtttcttatgtgattaggagtcctagttctagtagaattcgtggttaggagtagccacattgtggatataaatagaagaggaattgaagctagaagatatcgacttttgggagaggaaattaagttagggtttactttgtgatttcaattctagttcgtgagttgagagaggagtgctttagatgcactttgtaaacacatattgatgcaataaagttgatctacctccgtgagctaaaggctccgataataatatattatgctataaatgtttcacttgagacataatgaagtttggatgcatggctacgggtgataaaggatctcaatttccaaaagagtactcgcacagtcactactacaacaaccatttttccatgcgggtgtttggattattccgtgcgggggtttggtccgtttgcagcctgtcgtctgaaaaaaccgccattttcgcgtgcgggcgggccgaccgcacgggataatcgattatcctgtgcggtcggtataacacgaaccctaataaaaaaatcaaaatccacccacaaaccctaaccaaaatccacccacgaaccctaataaaaaatcaacactatcgacgttgtcgccgccaccaccgtcgtcgtcgccgccttcccgaaccccgccgttgtcgtcgccgccttcccgaaccccgctgtcgtcgtcgtcgccttcctgaaccccgctgtcatcgtcgccgccttcccgtcggaggcgggcgacggatctggcctccccgcggcggcgtgcgacggatccggcctccccgcggcggcgggcgacagatctgacctccccgcggcggcgggagacgaatccggcctcccgccgatgtcgccgtcgtagccgattcaaccgccgccgccatagccatagccgtcgccgaggacgagggagagggagagagtgatgggaggaaggggaggagctgtagccgatgccgctctagccgagggtgccgccgtggaagcgagggctccgccaccgatgccgctctagccgaggacaagagggagagggggaggagccgtagtcgccgctgccgccgaggaccgccctagccgagggcgccgccgtcgccgaggatgagagggagagggagaaggcgatgggaggagggaaggaggagagggagaagtgtgggagggatttggataagtgtggggtgggaggagccggttggaccactttatttttgggggcagctattttcgtgtgcgggtcacttaacagacccgcacgcattatttttgcgcgcgggtctgttaagtggcccgcacacgaaaattgattttcgtgcaggtgatatccccgcgccggtccctctatttttccgtgcggtttcacttacggactgcctggaagcaaaaagaggaggtgtctagaaaaatcattcgtgtagtagtgagttgcagtcgcactggaggtgtttggagctggtacaagatagttcagggttctttttcttttaaaagttggtactattaagagggatgaagttacgtagcttaaagtggtgaagtgctgaaagatctaggtgtggagcatgttaggttgctagcttctcaagtcgagtgctaaacaaggtgggagaaacgggcaatataactaaaatcattatcagcatataattattgataaccatatatggtagagccgtagagggtgatcgtattcatacctctttatctggaggatttcatggagttcatcgatgagttgcttttcatccaacgatgtcgtatatgaattcatatacattcgcttgtcaaggccaatgagaatatccctaaggactttcttcatgttaggatgcataccaactggaacaaaagccccacagtcgaatcccagcttaaacttatcatagactactttggcaagtgtggttttgccaagtcctcctaatccgacaacagaaactatcttcatgctcttatcagacgacagatcaatatcattcccaagggaaagcatctttaccagttcgttcatttgctcttccatgccaacaagctctgatgccttcatatacatagcctgcagtcgaggatcaacggttgctggaactgcaggcttggggatatcgttgaccatgtacctggcgcaggggaggagctaaaaaaaattagttcatcggtcactattcttgcttaattcctagtgttatccttaaacaatatatataaccattgatttcatcggaggtcggctgaccccgatggttgtactatagctccgcctacctgccacgccttgcagccacctcctggagcttatcgttgatttcctggatagctccagcgatcttgtgacgatgcttgctcttcttgaacagcttaccgacattcttggtgaggcgcttcagcaagcccggttcagcggcgggttccgggccgtcggcgcgcatgatgaggaagtcgtcgacgatgtcctccatgtcgtaggacgcctccctgaggtcgcgcgcccatagccggacctgatcgtcgagctgctccggcggcacctcgccaatcttgcggaggacggcgtgcacgctctccagctcctgcgagagagactcgatcttcttcctcacgcccgtctgcacgtcatactcgtccttgagaagctgacccagcttctggagcaggctgccgatcgcgcccgtcaccagatccat
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CDS seq | atggatctggtgacgggcgcgatcggcagcctgctccagaagctgggtcagcttctcaaggacgagtatgacgtgcagacgggcgtgaggaagaagatcgagtctctctcgcaggagctggagagcgtgcacgccgtcctccgcaagattggcgaggtgccgccggagcagctcgacgatcaggtccggctatgggcgcgcgacctcagggaggcgtcctacgacatggaggacatcgtcgacgacttcctcatcatgcgcgccgacggcccggaacccgccgctgaaccgggcttgctgaagcgcctcaccaagaatgtcggtaagctgttcaagaagagcaagcatcgtcacaagatcgctggagctatccaggaaatcaacgataagctccaggaggtggctgcaaggcgtggcaggtacatggtcaacgatatccccaagcctgcagttccagcaaccgttgatcctcgactgcaggctatgtatatgaaggcatcagagcttgttggcatggaagagcaaatgaacgaactggtaaagatgctttcccttgggaatgatattgatctgtcgtctgataagagcatgaagatagtttctgttgtcggattaggaggacttggcaaaaccacacttgccaaagtagtctatgataagtttaagctgggattcgactgtggggcttttgttccagttggtatgcatcctaacatgaagaaagtccttagggatattctcattggccttgacaagcgaatgtatatgaattcatatacgacatcgttggatgaaaagcaactcatcgatgaactccatgaaatcctccagataaagagacatgccggtggtgacgtttacaagatgaaaccgctttcttatgatgagtcaagaaagttactatatacaagaatacttggtgatcaaagtgggtctctccctactccatcagctgtggcatgtgacataattctgaaaaaatgtggcggtgtgccgttagttatcattacatcagctagtttattagccaacaaaccacgtgagtgctggtccgaaatgatgatatcgtttgatgatcttgagcacgcagacatgcatcatactccaaggataatgtgtttgagctactacaatttgcctttgcatctgaggccttgtttattatatctaagcatatttccagaagattattacattgagaaaaaaatgttaatatggaggtgggtagctgagggtttcatacaggagaaacaagaagctgacatagggttatttgaaattggggagggatacttcaacgagctgataaacagaagtctgatccagccagtggaggatgaatactcaggttgtgtaaatggttgccgtgttcacgatatcatgcttgatataatgtgcttattgtcagctaaagagaactttgtcactatagcgaatgccagttgggaacgtgaaattgaaaggaacaatgttcgcagactagttctgcataattattggggtttaaaagagagtgggcatcggctggctgatatggagttgaagcaactaaggacctttgttacgaatgagtgctctgcctctgatattaacaagaaattaccaagcttccaggttctccgtgtgttagaaacagaaaatcgtaataatttgatcacagaaagtgaaattaatctgcggcatgttggaagtttacttcaccttagatacctcagtctacaaaaagttgattctagttcgctcccagaggatgtcgggaatttgaagttgctactagtacttgatgtgcagtattctaatatacgagatctgccggaatcagtaggccagatgacgaaactgctgtgcctgcgtgttgattttgatgcaagggtgtcgcctagtgcgatcgggaagctgacatccctgcaggagctgaggatgaagcctcgtaaggatgataggtggcagtttgtgaaggtcctgggtaagctgaaggaattgaggatgctccaaactagtctctatctggatgggcttgccgatggaacatcatctttgctggagtccctatgcaatctgcacaagcttctcgacgtggagattgagggccaattttaccaaagagtgggcgtcgcgtgggaatcaggattcgcttcccctcaacgcctccgatacctgtgcttgacgtcgttgaggtttcacagaatgccggtgtggatgaactcgtcgcttcttgtgaacctctcctatcttaacttgagagtgcatgttttggatgggcaggacatggaagcacttgggaggttaccaaagctccgctacctcaagctgcatacggaatacgacgggatagtactagtcagtggcgacaagataattcccggcgatggctactttcaggagttgagatttcttatagcacccaatatgtgtgtcctgttttatcagaatgctgtcatgccaaatctcaaagttctcgagttcagtgtctatgtgcgaatcctacctggttttgaaaagctgcttagctttgcccatctcggaacaaattcactccaaagagtccaagttagaatcaactgtcgtgggggccgtcccgcggaagtcgagcaagtggaggcggcgttagcacacgccgccactgtccatccaaaccgtcttacccttcataccacgaggctttgggaggacgagatgctctccccttacgaagagcatagcggcttatttcctaaagtagttgttgaaaatgtcaatgtgcggaagaggaaaagcgctcatcttcgctctgacatctgttggatgctcaagcgtaatccatgcgtcaagaaattcagtgtctccattaattgtgcgaatgcaagtctggaggaggtggagaaagcagaggcggatgtgagattcgcagtggacgtccatgccaaccgtccgacacttaaactgacgagatacggtgaagatatgatggtgttgtctgaccaacaccagaaggtatgcaccctagcctag
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Protein seq | MDLVTGAIGSLLQKLGQLLKDEYDVQTGVRKKIESLSQELESVHAVLRKIGEVPPEQLDDQVRLWARDLREASYDMEDIVDDFLIMRADGPEPAAEPGLLKRLTKNVGKLFKKSKHRHKIAGAIQEINDKLQEVAARRGRYMVNDIPKPAVPATVDPRLQAMYMKASELVGMEEQMNELVKMLSLGNDIDLSSDKSMKIVSVVGLGGLGKTTLAKVVYDKFKLGFDCGAFVPVGMHPNMKKVLRDILIGLDKRMYMNSYTTSLDEKQLIDELHEILQIKRHAGGDVYKMKPLSYDESRKLLYTRILGDQSGSLPTPSAVACDIILKKCGGVPLVIITSASLLANKPRECWSEMMISFDDLEHADMHHTPRIMCLSYYNLPLHLRPCLLYLSIFPEDYYIEKKMLIWRWVAEGFIQEKQEADIGLFEIGEGYFNELINRSLIQPVEDEYSGCVNGCRVHDIMLDIMCLLSAKENFVTIANASWEREIERNNVRRLVLHNYWGLKESGHRLADMELKQLRTFVTNECSASDINKKLPSFQVLRVLETENRNNLITESEINLRHVGSLLHLRYLSLQKVDSSSLPEDVGNLKLLLVLDVQYSNIRDLPESVGQMTKLLCLRVDFDARVSPSAIGKLTSLQELRMKPRKDDRWQFVKVLGKLKELRMLQTSLYLDGLADGTSSLLESLCNLHKLLDVEIEGQFYQRVGVAWESGFASPQRLRYLCLTSLRFHRMPVWMNSSLLVNLSYLNLRVHVLDGQDMEALGRLPKLRYLKLHTEYDGIVLVSGDKIIPGDGYFQELRFLIAPNMCVLFYQNAVMPNLKVLEFSVYVRILPGFEKLLSFAHLGTNSLQRVQVRINCRGGRPAEVEQVEAALAHAATVHPNRLTLHTTRLWEDEMLSPYEEHSGLFPKVVVENVNVRKRKSAHLRSDICWMLKRNPCVKKFSVSINCANASLEEVEKAEADVRFAVDVHANRPTLKLTRYGEDMMVLSDQHQKVCTLA |
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Function | Disease resistance protein RGA5 [UniProtKB/Swiss-Prot:Q2R8L1] |
Transcripts
Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsKeNa_08g0004830 | OsKeNa_08g0004830.01 | Chr08 | 4221415 | 4227316 | - | NAM | ||
CDS seq | atggatctggtgacgggcgcgatcggcagcctgctccagaagctgggtcagcttctcaaggacgagtatgacgtgcagacgggcgtgaggaagaagatcgagtctctctcgcaggagctggagagcgtgcacgccgtcctccgcaagattggcgaggtgccgccggagcagctcgacgatcaggtccggctatgggcgcgcgacctcagggaggcgtcctacgacatggaggacatcgtcgacgacttcctcatcatgcgcgccgacggcccggaacccgccgctgaaccgggcttgctgaagcgcctcaccaagaatgtcggtaagctgttcaagaagagcaagcatcgtcacaagatcgctggagctatccaggaaatcaacgataagctccaggaggtggctgcaaggcgtggcaggtacatggtcaacgatatccccaagcctgcagttccagcaaccgttgatcctcgactgcaggctatgtatatgaaggcatcagagcttgttggcatggaagagcaaatgaacgaactggtaaagatgctttcccttgggaatgatattgatctgtcgtctgataagagcatgaagatagtttctgttgtcggattaggaggacttggcaaaaccacacttgccaaagtagtctatgataagtttaagctgggattcgactgtggggcttttgttccagttggtatgcatcctaacatgaagaaagtccttagggatattctcattggccttgacaagcgaatgtatatgaattcatatacgacatcgttggatgaaaagcaactcatcgatgaactccatgaaatcctccagataaagagacatgccggtggtgacgtttacaagatgaaaccgctttcttatgatgagtcaagaaagttactatatacaagaatacttggtgatcaaagtgggtctctccctactccatcagctgtggcatgtgacataattctgaaaaaatgtggcggtgtgccgttagttatcattacatcagctagtttattagccaacaaaccacgtgagtgctggtccgaaatgatgatatcgtttgatgatcttgagcacgcagacatgcatcatactccaaggataatgtgtttgagctactacaatttgcctttgcatctgaggccttgtttattatatctaagcatatttccagaagattattacattgagaaaaaaatgttaatatggaggtgggtagctgagggtttcatacaggagaaacaagaagctgacatagggttatttgaaattggggagggatacttcaacgagctgataaacagaagtctgatccagccagtggaggatgaatactcaggttgtgtaaatggttgccgtgttcacgatatcatgcttgatataatgtgcttattgtcagctaaagagaactttgtcactatagcgaatgccagttgggaacgtgaaattgaaaggaacaatgttcgcagactagttctgcataattattggggtttaaaagagagtgggcatcggctggctgatatggagttgaagcaactaaggacctttgttacgaatgagtgctctgcctctgatattaacaagaaattaccaagcttccaggttctccgtgtgttagaaacagaaaatcgtaataatttgatcacagaaagtgaaattaatctgcggcatgttggaagtttacttcaccttagatacctcagtctacaaaaagttgattctagttcgctcccagaggatgtcgggaatttgaagttgctactagtacttgatgtgcagtattctaatatacgagatctgccggaatcagtaggccagatgacgaaactgctgtgcctgcgtgttgattttgatgcaagggtgtcgcctagtgcgatcgggaagctgacatccctgcaggagctgaggatgaagcctcgtaaggatgataggtggcagtttgtgaaggtcctgggtaagctgaaggaattgaggatgctccaaactagtctctatctggatgggcttgccgatggaacatcatctttgctggagtccctatgcaatctgcacaagcttctcgacgtggagattgagggccaattttaccaaagagtgggcgtcgcgtgggaatcaggattcgcttcccctcaacgcctccgatacctgtgcttgacgtcgttgaggtttcacagaatgccggtgtggatgaactcgtcgcttcttgtgaacctctcctatcttaacttgagagtgcatgttttggatgggcaggacatggaagcacttgggaggttaccaaagctccgctacctcaagctgcatacggaatacgacgggatagtactagtcagtggcgacaagataattcccggcgatggctactttcaggagttgagatttcttatagcacccaatatgtgtgtcctgttttatcagaatgctgtcatgccaaatctcaaagttctcgagttcagtgtctatgtgcgaatcctacctggttttgaaaagctgcttagctttgcccatctcggaacaaattcactccaaagagtccaagttagaatcaactgtcgtgggggccgtcccgcggaagtcgagcaagtggaggcggcgttagcacacgccgccactgtccatccaaaccgtcttacccttcataccacgaggctttgggaggacgagatgctctccccttacgaagagcatagcggcttatttcctaaagtagttgttgaaaatgtcaatgtgcggaagaggaaaagcgctcatcttcgctctgacatctgttggatgctcaagcgtaatccatgcgtcaagaaattcagtgtctccattaattgtgcgaatgcaagtctggaggaggtggagaaagcagaggcggatgtgagattcgcagtggacgtccatgccaaccgtccgacacttaaactgacgagatacggtgaagatatgatggtgttgtctgaccaacaccagaaggtatgcaccctagcctag
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Protein seq | MDLVTGAIGSLLQKLGQLLKDEYDVQTGVRKKIESLSQELESVHAVLRKIGEVPPEQLDDQVRLWARDLREASYDMEDIVDDFLIMRADGPEPAAEPGLLKRLTKNVGKLFKKSKHRHKIAGAIQEINDKLQEVAARRGRYMVNDIPKPAVPATVDPRLQAMYMKASELVGMEEQMNELVKMLSLGNDIDLSSDKSMKIVSVVGLGGLGKTTLAKVVYDKFKLGFDCGAFVPVGMHPNMKKVLRDILIGLDKRMYMNSYTTSLDEKQLIDELHEILQIKRHAGGDVYKMKPLSYDESRKLLYTRILGDQSGSLPTPSAVACDIILKKCGGVPLVIITSASLLANKPRECWSEMMISFDDLEHADMHHTPRIMCLSYYNLPLHLRPCLLYLSIFPEDYYIEKKMLIWRWVAEGFIQEKQEADIGLFEIGEGYFNELINRSLIQPVEDEYSGCVNGCRVHDIMLDIMCLLSAKENFVTIANASWEREIERNNVRRLVLHNYWGLKESGHRLADMELKQLRTFVTNECSASDINKKLPSFQVLRVLETENRNNLITESEINLRHVGSLLHLRYLSLQKVDSSSLPEDVGNLKLLLVLDVQYSNIRDLPESVGQMTKLLCLRVDFDARVSPSAIGKLTSLQELRMKPRKDDRWQFVKVLGKLKELRMLQTSLYLDGLADGTSSLLESLCNLHKLLDVEIEGQFYQRVGVAWESGFASPQRLRYLCLTSLRFHRMPVWMNSSLLVNLSYLNLRVHVLDGQDMEALGRLPKLRYLKLHTEYDGIVLVSGDKIIPGDGYFQELRFLIAPNMCVLFYQNAVMPNLKVLEFSVYVRILPGFEKLLSFAHLGTNSLQRVQVRINCRGGRPAEVEQVEAALAHAATVHPNRLTLHTTRLWEDEMLSPYEEHSGLFPKVVVENVNVRKRKSAHLRSDICWMLKRNPCVKKFSVSINCANASLEEVEKAEADVRFAVDVHANRPTLKLTRYGEDMMVLSDQHQKVCTLA
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Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
OsKeNa_08g0004830 | OsKeNa_08g0004830.02 | Chr08 | 4220599 | 4221693 | - | IsoSeq | ||
CDS seq | atgttgttcaagtcaagattctcacagactaaagtggtggcacggaaggaatcctgcctgtctgatcagaacaggaagccgctgcagatcgatgctgccatcgtgagaatcatgacgcacagaagagtgatcgatcataacagcatcatgtatgacactcaccttgagttcatgact |
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Protein seq | MLFKSRFSQTKVVARKESCLSDQNRKPLQIDAAIVRIMTHRRVIDHNSIMYDTHLEFMT |
Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
Leaf | Root | Panicle | |
FPKM | 0.513704 | 10.312900 | 0.097292 |
Homologues
Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
---|---|---|---|---|---|
Leaf | Root | Panicle | |||
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_08g0170100 | SBH | 1.057518 | 1.653448 | 0.850440 |
Nipponbare | IRGSP 1.0 | MSU | LOC_Os08g07380 | RBH | 0.0 | 0.0 | 0.0 |
Nipponbare | IRGSP 1.0 | RAP-db | Os08g0170100 | SBH | None | None | None |
Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_08g0004740 | SBH | 0.168547 | 0.000000 | 0.359327 |
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_08g0004860 | SBH | 0.330677 | 9.358120 | 1.459795 |
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_08g0004750 | SBH | 0.000000 | 0.000000 | 1.238678 |
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_08g0004790 | SBH | 0.021650 | 0.000000 | None |
PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_08g0004590 | SBH | 2.174781 | 4.601822 | 3.999743 |
Minghui 63 | MH63RS3 | HZAU | OsMH63_08G0061900 | SBH | 0.6057375 | 16.6181255 | 19.854616 |
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_08g0004410 | RBH | 0.0 | 0.000000 | 0.124746 |
Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_08G0067300 | RBH | 1.378076 | 25.991418 | 0.0594805 |
LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_08g0004490 | RBH | 0.068836 | 1.143974 | None |
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_08g0001480 | RBH | 0.936822 | 63.947994 | None |
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_08g0004370 | RBH | 2.414437 | 29.223381 | None |
LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_08g0004660 | RBH | 0.465648 | 2.934512 | 0.000000 |
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_08g0004510 | SBH | 0.036007 | 0.000000 | None |
N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_08G004440 | SBH | 0.118992 | 0.674142 | 0.302935 |
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_08g0004430 | SBH | 8.328967 | 88.944145 | 19.449026 |