Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_07g0017920 | OGI:07058800 | 4/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr07:21656587-21659221 | ||||||||
| Gene Symbol | - | ||||||||||
| DNA seq | ggtgttccaatttacttgacaaaaagaaaaaaaaattctccccttcccccctttgctgcgatgatgctcgccggctatggcatcctcgccgttgtcctcgtcctcctgccgccgtcggccacgccggctgggatcgctgactgcgacctcggcgtcggcaacacgtacgtgggcaacagcacgttcgaggcgaacctgaaccacctcgccgcggagctccccggcaacgtctccacggcgcataccggcggcttcgcggtcgccaccgtcggcgcggatcccgaccaggtgttcgcgctggcgctctgccgcggcgacgtgaacgccacagcctgccgcgcgtgcgtcgcggcggcgttcgtcgacgggaagaatgcttgccccggcatcaatggcgtcaccgtgtacgaggacgcctgcgtagttcgcttctccggccagaggttcatggatttcctcagtccggatcagtggcaggtcaccgagatgatgtacggacaatctacatatctcccttctttcgatctcttcctgctagaatcagatagactaattcgagtagctcgttacaaacagttgggttcccgagcaagcctcggagagcgtcaatgcgccggcggttggctggttcaacgccgccgtcgcgaagatcctcgccgccctggtcgaccacgccgtggccacggcgacgggcaacaactcgaccaccaagaagtatttcgccacgggtgaggaggacttcgaccccaacatctacgggttcgcgcagtgcgtgccggacctgacgccggagcagtgcaaggaatgcctcaacaccttcctttttcaagcaaaacaagtgtactttggcaagagccttagctgggttggtataaattcggtgtggtgcagactgatgtatagtgtgcggccgttctacggaggccgggcgatgctgcagctgtcggcgccaccaccaccagcagccgaggctccggttctatctctagagcctggagcaggtatggagtatgacctactctgttcttcatttttcctgaagaaaaaaaaataacagaagttacagtgaaatcaaggtttccccaattgaagttcatgtttggtgtttgcagggaagaaaaagagtgcagctggaatcgccgccgtcgtcgcttcttcagttgtggtattgttgatcctttcattttttgcagttgttctcttcaggagaaggtccaaggttactgagactgaccaccgtgagtagcatacagcctctgttcagtagctcgaatttactgttcactgacataatccttgtcatatggcaacagagttgaggaagataacaagagcacaatgcttgatttttgacctgccagctctgcaagaggcaacggataacttctcggacaataataagctcggagaaggtggttatggtattgtatacaaggtaaggttagcacccaaaaatgtaagagaaatgtttgaaatgtattatgcattagtgatcaaacgaaaattaaattgcctgcaacaattgtgttcagggagtactctcagatggacaagaagtagcagtgaagaaacttttgggaacaagtgagcatggattggatcagctacaaaatgaggtgttgttattgtcagagcttcaacacaagaaccttgttaagctacaagggttttgcttgcatcagggggaaacactgcttgtttatgaatacgtcaagaacgggagcctggataactttctattcggtaatttcccttctaatttatcatttcagaagcataatcataactctatcttcgtttgtcaatgtaaaaaaagattgcagtgctgatctactttgcaagtacaaaaactcccccttttctgtatgcacagacatatttataatagtggagtcgctgtactataaacagttactggaaattttcaactttatgccacgtttatacaacatcaataagaataaactgagcaatgcacaactgcaagttagtgtggggtactgaatatgtactgtagcatttctgacaaacaagttacatggctaagaatagaatttgacgtattataggtgagtgattatgattaaattaaacatttcatctcaacagataccagtaggggaaacacaccaaactgggagcaactgtacaacatcatttttggaattgccaagggaatattgtatcttcacgaggactcaagcttgaggatcattcaccgagacctgaaatcaaacaacatcctacttggggaggacatggaaccaaaaattgcagattttggattggcaaggctactagaagaaggtcatactaatactcggacaactagaattgttggaacattgtaagctcatgtgcataataaaaccttcactcatagagatattgaatgtgcaagcctaatgcttatcctctgcagcggttatatggcacctgagtacgcaatacacggaaatgtgtcaaccaagatcgatgttttaagttttggtgtgttggtccttgaaattgtaacagggagaaggaacctcaattctgacgatcatgatcgcgggaatctccttagtgatgtaagtgctcaataaggttgagcttgctcctgtacatatatacttttagtgcatttacatactgc
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| CDS seq | atgatgctcgccggctatggcatcctcgccgttgtcctcgtcctcctgccgccgtcggccacgccggctgggatcgctgactgcgacctcggcgtcggcaacacgtacgtgggcaacagcacgttcgaggcgaacctgaaccacctcgccgcggagctccccggcaacgtctccacggcgcataccggcggcttcgcggtcgccaccgtcggcgcggatcccgaccaggtgttcgcgctggcgctctgccgcggcgacgtgaacgccacagcctgccgcgcgtgcgtcgcggcggcgttcgtcgacgggaagaatgcttgccccggcatcaatggcgtcaccgtgtacgaggacgcctgcgtagttcgcttctccggccagaggttcatggatttcctcagtccggatcagtggcaggtcaccgagatgatttgggttcccgagcaagcctcggagagcgtcaatgcgccggcggttggctggttcaacgccgccgtcgcgaagatcctcgccgccctggtcgaccacgccgtggccacggcgacgggcaacaactcgaccaccaagaagtatttcgccacgggtgaggaggacttcgaccccaacatctacgggttcgcgcagtgcgtgccggacctgacgccggagcagtgcaaggaatgcctcaacaccttcctttttcaagcaaaacaagtgtactttggcaagagccttagctgggttggtataaattcggtgtggtgcagactgatgtatagtgtgcggccgttctacggaggccgggcgatgctgcagctgtcggcgccaccaccaccagcagccgaggctccggttctatctctagagcctggagcagggaagaaaaagagtgcagctggaatcgccgccgtcgtcgcttcttcagttgtggtattgttgatcctttcattttttgcagttgttctcttcaggagaaggtccaaggttactgagactgaccaccagttgaggaagataacaagagcacaatgcttgatttttgacctgccagctctgcaagaggcaacggataacttctcggacaataataagctcggagaaggtggttatggtattgtatacaagggagtactctcagatggacaagaagtagcagtgaagaaacttttgggaacaagtgagcatggattggatcagctacaaaatgaggtgttgttattgtcagagcttcaacacaagaaccttgttaagctacaagggttttgcttgcatcagggggaaacactgcttgtttatgaatacgtcaagaacgggagcctggataactttctattcgataccagtaggggaaacacaccaaactgggagcaactgtacaacatcatttttggaattgccaagggaatattgtatcttcacgaggactcaagcttgaggatcattcaccgagacctgaaatcaaacaacatcctacttggggaggacatggaaccaaaaattgcagattttggattggcaaggctactagaagaaggtcatactaatactcggacaactagaattgttggaacattgtaa
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| Protein seq | MMLAGYGILAVVLVLLPPSATPAGIADCDLGVGNTYVGNSTFEANLNHLAAELPGNVSTAHTGGFAVATVGADPDQVFALALCRGDVNATACRACVAAAFVDGKNACPGINGVTVYEDACVVRFSGQRFMDFLSPDQWQVTEMIWVPEQASESVNAPAVGWFNAAVAKILAALVDHAVATATGNNSTTKKYFATGEEDFDPNIYGFAQCVPDLTPEQCKECLNTFLFQAKQVYFGKSLSWVGINSVWCRLMYSVRPFYGGRAMLQLSAPPPPAAEAPVLSLEPGAGKKKSAAGIAAVVASSVVVLLILSFFAVVLFRRRSKVTETDHQLRKITRAQCLIFDLPALQEATDNFSDNNKLGEGGYGIVYKGVLSDGQEVAVKKLLGTSEHGLDQLQNEVLLLSELQHKNLVKLQGFCLHQGETLLVYEYVKNGSLDNFLFDTSRGNTPNWEQLYNIIFGIAKGILYLHEDSSLRIIHRDLKSNNILLGEDMEPKIADFGLARLLEEGHTNTRTTRIVGTL |
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| Function | Cysteine-rich receptor-like protein kinase 6 [UniProtKB/Swiss-Prot:Q0D5R3] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_07g0017920 | OsKeNa_07g0017920.01 | Chr07 | 21656587 | 21659221 | + | NAM | ||
| CDS seq | atgatgctcgccggctatggcatcctcgccgttgtcctcgtcctcctgccgccgtcggccacgccggctgggatcgctgactgcgacctcggcgtcggcaacacgtacgtgggcaacagcacgttcgaggcgaacctgaaccacctcgccgcggagctccccggcaacgtctccacggcgcataccggcggcttcgcggtcgccaccgtcggcgcggatcccgaccaggtgttcgcgctggcgctctgccgcggcgacgtgaacgccacagcctgccgcgcgtgcgtcgcggcggcgttcgtcgacgggaagaatgcttgccccggcatcaatggcgtcaccgtgtacgaggacgcctgcgtagttcgcttctccggccagaggttcatggatttcctcagtccggatcagtggcaggtcaccgagatgatttgggttcccgagcaagcctcggagagcgtcaatgcgccggcggttggctggttcaacgccgccgtcgcgaagatcctcgccgccctggtcgaccacgccgtggccacggcgacgggcaacaactcgaccaccaagaagtatttcgccacgggtgaggaggacttcgaccccaacatctacgggttcgcgcagtgcgtgccggacctgacgccggagcagtgcaaggaatgcctcaacaccttcctttttcaagcaaaacaagtgtactttggcaagagccttagctgggttggtataaattcggtgtggtgcagactgatgtatagtgtgcggccgttctacggaggccgggcgatgctgcagctgtcggcgccaccaccaccagcagccgaggctccggttctatctctagagcctggagcagggaagaaaaagagtgcagctggaatcgccgccgtcgtcgcttcttcagttgtggtattgttgatcctttcattttttgcagttgttctcttcaggagaaggtccaaggttactgagactgaccaccagttgaggaagataacaagagcacaatgcttgatttttgacctgccagctctgcaagaggcaacggataacttctcggacaataataagctcggagaaggtggttatggtattgtatacaagggagtactctcagatggacaagaagtagcagtgaagaaacttttgggaacaagtgagcatggattggatcagctacaaaatgaggtgttgttattgtcagagcttcaacacaagaaccttgttaagctacaagggttttgcttgcatcagggggaaacactgcttgtttatgaatacgtcaagaacgggagcctggataactttctattcgataccagtaggggaaacacaccaaactgggagcaactgtacaacatcatttttggaattgccaagggaatattgtatcttcacgaggactcaagcttgaggatcattcaccgagacctgaaatcaaacaacatcctacttggggaggacatggaaccaaaaattgcagattttggattggcaaggctactagaagaaggtcatactaatactcggacaactagaattgttggaacattgtaa
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| Protein seq | MMLAGYGILAVVLVLLPPSATPAGIADCDLGVGNTYVGNSTFEANLNHLAAELPGNVSTAHTGGFAVATVGADPDQVFALALCRGDVNATACRACVAAAFVDGKNACPGINGVTVYEDACVVRFSGQRFMDFLSPDQWQVTEMIWVPEQASESVNAPAVGWFNAAVAKILAALVDHAVATATGNNSTTKKYFATGEEDFDPNIYGFAQCVPDLTPEQCKECLNTFLFQAKQVYFGKSLSWVGINSVWCRLMYSVRPFYGGRAMLQLSAPPPPAAEAPVLSLEPGAGKKKSAAGIAAVVASSVVVLLILSFFAVVLFRRRSKVTETDHQLRKITRAQCLIFDLPALQEATDNFSDNNKLGEGGYGIVYKGVLSDGQEVAVKKLLGTSEHGLDQLQNEVLLLSELQHKNLVKLQGFCLHQGETLLVYEYVKNGSLDNFLFDTSRGNTPNWEQLYNIIFGIAKGILYLHEDSSLRIIHRDLKSNNILLGEDMEPKIADFGLARLLEEGHTNTRTTRIVGTL
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_07g0537900 | RBH | 0.402823 | 0.382223 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os07g35340 | RBH | 0.265406 | 0.283823 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os07g0537900 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_07g0017990 | SBH | 0.0 | 0.000000 | 0.000000 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_07g0017950 | RBH | 0.0 | 6.008116 | 0.0 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_07g0017880 | RBH | 0.0 | 2.225461 | 0.791283 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_07g0017800 | RBH | 0.000000 | 0.049537 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_07g0017900 | RBH | 0.000000 | 0.000000 | 1.150759 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_07G0344100 | RBH | 0.307331 | 7.036415 | 3.400765 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_07g0018400 | SBH | 0.0 | 0.083641 | 0.020317 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_07G0358400 | SBH | 1.1841445 | 13.820534 | 1.580925 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_07g0017660 | SBH | 0.035090 | 0.231309 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_07g0017800 | RBH | 0.0 | 1.462593 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_07g0017720 | RBH | 0.0 | 3.643550 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_07g0018020 | RBH | 0.0 | 0.238302 | 0.000000 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_07g0017790 | RBH | 0.0 | 1.885295 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_07G017780 | SBH | 0.000000 | 0.000000 | 0.088755 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_07g0017630 | RBH | 0.466285 | 10.423672 | 0.741305 |
