Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKeNa_06g0011480 OGI:06028590 | 16/16 KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) Chr06:9740732-9741601
Gene Symbol DOF20, OsDof20, Dof20, OsDof-20
DNA seq

atgcaggagttccaccccgtccccgggctggccggccggctgttcggcggcgcggcggcggcggcggcggtggcggcggtggaggaggtgcggtgcccgcggtgcgactcgtcgaacaccaagttctgctactacaacaactacaacctctcccagccccgccacttctgcaaggcgtgccgccgctactggaccaagggcggcctcctccgcaacgtccccgtcggcggcggctgccgcaagcccaagcgcccggcgccgccgccgtcgtcctccttcaccggcggcggcggcggcggcggcGggtgtggccatcgcgactccaagagcgcacgctcagccgccggcggcggcgacggctcgggctcgaccgcgagcgccacggcgacccccgctgcggcgcctgcgtcgtcgaacaccttgtctgctgctgtttcccagccaagcagcgtcgacgcgctgtcgccgcctccggcgccgatgttcgccgaccaggccacggcgttcgcgtcgctcttcgcgccgccgccgccgccaccgtcgcaggcgctcccggccttcgcgagcttcacggcgcagcccaaggcagaggaggacgtcgccgacgcacctgcgctcgcagccacggagcagcaccggtcgtcctcggcggcgtcgttcgccgcacacagcatctcgccgccgttcgccgccgcacggtcctcggatgggccggcagcggctgccgccgccgccgccgccgactgggcgcctccgacggcggtgctcgacgccgggatgttcgacctcgccggcgccatcggcggcgacacgtcgtactggaacgcggcgagctggactgaccacgacggcacgatctacctgccgtag

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CDS seq

atgcaggagttccaccccgtccccgggctggccggccggctgttcggcggcgcggcggcggcggcggcggtggcggcggtggaggaggtgcggtgcccgcggtgcgactcgtcgaacaccaagttctgctactacaacaactacaacctctcccagccccgccacttctgcaaggcgtgccgccgctactggaccaagggcggcctcctccgcaacgtccccgtcggcggcggctgccgcaagcccaagcgcccggcgccgccgccgtcgtcctccttcaccggcggcggcggcggcggcggcGggtgtggccatcgcgactccaagagcgcacgctcagccgccggcggcggcgacggctcgggctcgaccgcgagcgccacggcgacccccgctgcggcgcctgcgtcgtcgaacaccttgtctgctgctgtttcccagccaagcagcgtcgacgcgctgtcgccgcctccggcgccgatgttcgccgaccaggccacggcgttcgcgtcgctcttcgcgccgccgccgccgccaccgtcgcaggcgctcccggccttcgcgagcttcacggcgcagcccaaggcagaggaggacgtcgccgacgcacctgcgctcgcagccacggagcagcaccggtcgtcctcggcggcgtcgttcgccgcacacagcatctcgccgccgttcgccgccgcacggtcctcggatgggccggcagcggctgccgccgccgccgccgccgactgggcgcctccgacggcggtgctcgacgccgggatgttcgacctcgccggcgccatcggcggcgacacgtcgtactggaacgcggcgagctggactgaccacgacggcacgatctacctgccgtag

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Protein seq

MQEFHPVPGLAGRLFGGAAAAAAVAAVEEVRCPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGGCRKPKRPAPPPSSSFTGGGGGGGGCGHRDSKSARSAAGGGDGSGSTASATATPAAAPASSNTLSAAVSQPSSVDALSPPPAPMFADQATAFASLFAPPPPPPSQALPAFASFTAQPKAEEDVADAPALAATEQHRSSSAASFAAHSISPPFAAARSSDGPAAAAAAAAADWAPPTAVLDAGMFDLAGAIGGDTSYWNAASWTDHDGTIYLP

Function Dof zinc finger protein 4 [UniProtKB/Swiss-Prot:Q6Z345]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKeNa_06g0011480 OsKeNa_06g0011480.01 Chr06 9740732 9741601 + NAM
CDS seq

atgcaggagttccaccccgtccccgggctggccggccggctgttcggcggcgcggcggcggcggcggcggtggcggcggtggaggaggtgcggtgcccgcggtgcgactcgtcgaacaccaagttctgctactacaacaactacaacctctcccagccccgccacttctgcaaggcgtgccgccgctactggaccaagggcggcctcctccgcaacgtccccgtcggcggcggctgccgcaagcccaagcgcccggcgccgccgccgtcgtcctccttcaccggcggcggcggcggcggcggcGggtgtggccatcgcgactccaagagcgcacgctcagccgccggcggcggcgacggctcgggctcgaccgcgagcgccacggcgacccccgctgcggcgcctgcgtcgtcgaacaccttgtctgctgctgtttcccagccaagcagcgtcgacgcgctgtcgccgcctccggcgccgatgttcgccgaccaggccacggcgttcgcgtcgctcttcgcgccgccgccgccgccaccgtcgcaggcgctcccggccttcgcgagcttcacggcgcagcccaaggcagaggaggacgtcgccgacgcacctgcgctcgcagccacggagcagcaccggtcgtcctcggcggcgtcgttcgccgcacacagcatctcgccgccgttcgccgccgcacggtcctcggatgggccggcagcggctgccgccgccgccgccgccgactgggcgcctccgacggcggtgctcgacgccgggatgttcgacctcgccggcgccatcggcggcgacacgtcgtactggaacgcggcgagctggactgaccacgacggcacgatctacctgccgtag

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Protein seq

MQEFHPVPGLAGRLFGGAAAAAAVAAVEEVRCPRCDSSNTKFCYYNNYNLSQPRHFCKACRRYWTKGGLLRNVPVGGGCRKPKRPAPPPSSSFTGGGGGGGGCGHRDSKSARSAAGGGDGSGSTASATATPAAAPASSNTLSAAVSQPSSVDALSPPPAPMFADQATAFASLFAPPPPPPSQALPAFASFTAQPKAEEDVADAPALAATEQHRSSSAASFAAHSISPPFAAARSSDGPAAAAAAAAADWAPPTAVLDAGMFDLAGAIGGDTSYWNAASWTDHDGTIYLP

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Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source

Expression

Leaf Root Panicle
FPKM 0.0 0.0 0.063143

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0284500 RBH 2.987751 2.981267 1.882967
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g17410 RBH 2.168797 2.004352 0.376487
Nipponbare | IRGSP 1.0 | RAP-db Os06g0284500 RBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0011570 RBH 0.563260 0.0 0.0
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) OsKeNa_02g0032140 SBH 0.430893 3.904878 6.348523
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0011480 RBH 1.110810 0.0 0.0
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0011500 RBH 0.140597 0.0 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0011600 RBH 5.169788 0.0 0.0
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0165400 RBH 8.0704895 8.9713365 0.008717
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0011100 RBH 0.248942 0.000000 0.009800
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0162400 RBH 7.0302535 9.9666085 0.0383145
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0011590 RBH 0.313641 0.0 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0011440 RBH 0.469301 0.0 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0011400 RBH 6.428633 0.0 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0011600 RBH 0.649252 0.0 0.293489
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0011370 RBH 2.138848 0.0 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G011280 RBH 0.164100 0.0 0.017558
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0011600 RBH 2.242927 2.587822 0.379402
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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