Basic Info

Gene ID OGI # | Score   Accession | Assembly | Annotation Location Links
OsKeNa_06g0007970 OGI:08032140 | 16/16 KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) Chr06:6012694-6022226
Gene Symbol DJA9, OsDjA9, DjA9, -
DNA seq

gaataagagcatgctcttctcatctgccatgcaaaattcaagatcaaacttgtacaacgtaacattcaatatgtgggccaTttttggctgagtttttaggcctccatgaagacctactcctacatgacagcatgaatttacaagacaacactccacgcagcacgggcgtaggaaaaagtcactttctgctggttgtagctatcctccctattaagcacccaaattatatgctggtaaaaacaaaaaacacagcaaaaactaggaattgaaacctagcatccccattgttCtcccaTtattggagcattacaaaaTaaaactccgtacagcttgtgattcgactgtaatgggaatcaaaattcaaactagtatgagtatctcttccaatggaacgagcaatcttctgccctgcgcctccaaaatcacggatccctgcagctgaataatcatgatgaccgatgtccaggttttaaatctccagagaatttatacgatgtgatgtcgccagatgttccttgtgaagcctagttcacagtcttggtcagtagcaggtgaaccagtacgaggaagccaagcccaagcaagaaagtttgccccttcatattttcaactagctcccacctgtaagtatcaaccagtagacagctgctggtaaagcctgtttgaaatttcatctttattactaccagacgatgcaagcagtaaataaaaacaacaaatattagcaatgaaagttcggtaggtcaggtgaatcgcttgcttgccaggtccaacaaactaaaaagaccagaataaagcaaacacattgatcgttacattttcttcaagtgaataaattgatcaatagatggacattaataaatcatgcatctttcaatgattgatcctgcgattaccattctattccaatataggttcacataatgatgtgagggttgcttaccagtttccagctgaaaaggaactctgttccttcgtggcttcctctactgcaaattcttctaacagggcacgttgacgttcattaaccattctgcagattaaattgtgttgatcagaaatcaaattgaagtgtgatgcactgtgtaaatctctttagatgaaattgcgaaagaccagtgtaaatccctttagatgaaccaaattgaatagaaaggtattgatgacttgagatttatccacaatggagcaaaagtaaggtcaaaaggtcatagaatattaaacgtcagctcagcgtaaatcaaaatgaagtatgagatgctgacgctgttatctgtaaaatttcatgcactgactagttgcccccatgtttgggattatcaacaacagcaggaacccagtacacctcttgggactatcttttctagagttcaggacctctaggcataccatatgagttccacgtgccaagtgccaaccagttagcctaaatgcttaaaaaagagatctgtgcgatccaatcataattcaacactatgtcctataaaaggtcaaacttaactcAGagaccaagttcccctgaccagtttaacccatcctattagactggtccagctttaggttaccaaaaccagttctgcagaacatctacgggttattgcacccatagcatttttggtcctcttccttgtcatccttgtagccaacatttctttctatagttggtgcaaatttttgcatgctgtatgaagtgcagtccgaaagggactactgcacggtttacttcaaaaacaaatatgtgataagaggaaatggaatgccagcatatcaagtaacttgatcatagggtgcatccatatgttgcaaaacagaaacaggtaacacgaaaaggacaaacaacttacgagggaaaatgtattcgaaatcggacatgttggtccccaagatacccagcctggttgggcaatcctgacaatagtaatatatttagcactttgctaggaacacactctggtcttagatttaattaataattgcataatttacctttaccccttaaaactataacctgccctggttgaactcctttgggtatctgaaaaaaattcaccagatatcaactacgcaaaatacgaaaattcacacttcaaacacaccatctcatgaaatttatggtaacatggagacatgcttgatgcttccataaagtcaggccaagttaccgggcattataaatataaagggatacattctatgaaacattgcatggctaggtttgtaaatacaatatgtaatgaagaaagtccaactttggtcgctcaagacttcatgtcttaactttttccaaataggatgatgtggatgatatgtgctaactaatgatctgtttcgcaaaagaaaaacgaaaagtaatggcgcgaagccacataaacgcaatttgcaccagtttagcatttgaagggtgaaacttAaagatatagaagtttagggtgaaaatttaactctgatgagagttaagggacaaaagatggaccttttcctgtcgtatttgttatacaatatcaaggtctttatggaaaactacaatagttgtatttgttatacaactgtaaagttctagtatctaatccatcaattatgtcaaccggtataaccagcccccaaccaaaaataagccgtttatatccttctctctcatcatctctctctttatatatttatatctcaataaggagagattgtaacatctatgttccattttaggatttacagttggaacttcgagcccttaaattgaaggatggtgttttttatcctactagttctttatacgtgtgtacaTGtatatagacaagattagcaaatagtcaaaattatataaaatgttactatgacagaagtgcctaatctttagtagtagtatatgaggattgctaatttgttaccttaacttctgctgtgccatctaaagtcggcacttcaacttttccaccaagcattgcctgtcatttttttcaaggaagaaaacaataagcaacaatatcatcacaattcacaatcaccattaattaatagcacaaattcgaagggcctccacagaggcacagatattcatcaagtgcagtttgatacaagagttttcaacagagaataatcacaataatagtgttccccaaatctaacaaactatcacatctgatttcaccacctctataggttcaccaagacagcatcgtcaacctctgaaggcttctacatctctcaagatagtatttatagtgaaaaatggagagtttttattgcctgaatggactagatttttcttgaattgtaattagaatgatgattcgcataacttgcagtctatattaggagggaagcaagctacgaagtacatatgttagcagtaggaaaatattcctgaaaagtagtgtatttcttacaaatgcttactctatattaaatattaataacagaaggaatatttgttactacctgtgtgaagctaatctttttgtctacatggatatcagcaccatcacgaacaaacactggatcacttgctacctatgatatacatagttgatggaagaatcagcagctgggttgcttgagaattgagataagctgaggctaatagcgtactgctcacacatggcacaagccagtacattgcatgtaTttatactacatagatctaactaaccaggataaacggcaaaacaaactacttggagggtcatccggaataacagagaacatgaccatgactgaaagacaatgaaacaacatagagagacttatgaagtcccatggtgtcaaacttgcataaagatgaggaatcctatagtgcaacaagtggccattatattttggtcagagtcatagattctttaacgcacatatttggatgaaccaaaggatggaaactagtctgtcctaatacatatacatgcaaactaatccataacaagctacatagtgagagccaggaCcccgtaatttgcagcaaaaatcatgaaaaccctgttaaggacttaaggtgcttacatagaaatgcaagactctctatacctatgaatcatctcagctaatgcatgatttcatgactttgctacaatatttatagaaaatattgttcttttccttcaacatagtaccgaacaaaaatggaatgagtaaaatctacaagcacaattgtttaaactgattaatatattattttcattctaaacttcaaatacgccaagacaaatcgaaatattgtaatcctcatgttttcctatcttccttatcctcattagcacctcagtactaagcaacaaacttttaacattgacaagtcaaataaggcttatgtcagcaataataaataactatgtgcaccaatatattcacagaacttgtaagttcataaaaaaaaaggtcaagcattcatgtaggtgttttctcacttgaagcttaatgtacaaacttccaggtagggttccacgtccaccactatgtccagcctctggtacatgaattgtatcgccagaatcaacccctatgttgagtgaaacaaggagtaattaacatgaaaacacaattcacagtctcaacttaagtttaattgtaagcaacatgtcatacctataaagagtttcaaaacaaccttagcaaactaggaagcaacatcctttttacaattgagaaaagaaaaaactagaaactagaatgacaacatagcagcccagatgccagatgttccttgaatgaacctgtcaacgcaaagagatggagcaatatatatgcaagctaacttagattttacatttttcacgagaatgcatgtgcaatatatgtggataaggcgcagtaatagagctaggttttggcatgtgttagcctgacgtgtgtctgtaatatagctacaatgactggtaaaagtcgtgttatgcatacccgcaaacctggggttttgtgaaatttatttgaagTttttttaagtggaatagaaaaaatgtaaatcattttgacaattgtagccgtttcagggaaaggagctggctaacaacgataatttaaggttagctgcacagcacctgctggaatggtcacatttacatatttcatgccatctaccacccctgaacctttgcatgtcaggcagtaatcctgtgaaaatagtcacaaatgagatagggtaaaaaaagaaaaatctgacatgttactcacagaacccttaccttaattactttcccaaagcctctgcaagaagtacaaatggatgtgaatgggttaatggaaacctgcacaaaccaccagtggatatgtttagaaagcatatccagcattcatgttagaaagggaaaattgaatataaaagcaaatacttactcttcctgcacctctacatgaagggcaaacatacatctttgcattggccaagtaccctctcccatctgacatcaaacaataccatgagagcTttactcaaaaagaaaggacaatgcatggcaaatgagaactagtggactactgtatatattacagtatatgctagatcgggtcaaaaagaaagggcaatgcatgccaaatgagaactagtggacgaccgtacatatggcagtatatgctagatcagggcaatcaaccttaaagctttgtgtagtgtatttattcagcaagtcatcataaaaaacaagcatatattctcctgcatactctaaaaaaatcaagcatttaaagtTATAtatatatatatatatatatatattaaaaaaaaggtattgtctgctcaccttatttacgacactaggacatgatctagattcagttattgatttttagaaaagctttaattaaattttgcaaaagtacatggtagtagtttcataagcgatcatataaaatgctgacatatcctatactaccagtcatacccaataattattaactcagatacaactgacaccccagaacatgcttggcagtagttggagggagaaattacatgagcatcattgatggtaccatatttgtgatatcatgtggcatgataactgaaggaaaatctaatggaataggatttctcatttgcttaagctacagaaaacagctaatctaactaatggtaccgcttaaactagtgccttttccacaggactgaatgctcagacaaactatctagatagatgagatacatggacactaccagtcagtaagtttcttcgaggtttACagcaaaataacttatgcatcaagcatttattagaaacatgacttgcgacgatttgaaacttgcttgatagtacgtgcaatataaataagaaaaactgttccaggataaatgcacaccacatgagtcgcaaagattttttgcactgaaggagacttgcttcatgcatcctttaacagcatctctaaaggaaagattcacctctacctatgaaagtaaagccatgaaattagtttcaatgactaaaaaaaatgttacatagtaaaagaagcataagccttaggatgaacctcaatatcgttggcatgtgcatctacatcatgctcaaaaacctgaatacaaagagaagcgttgcactccattgtgagctatttaagtaaaaactggaaaaatatggaaggaaaaagagtcacctcggAgaatattttgtaaaatttactggaaaaaggaccattgttttgtctgtagaattctgcaaagggattatgaccctgcttgtggaatcctgaaaatggatcttgataggccccatcaaaatccatcccactCtttgaggaatttgtctcagaccctctataaaatagctgcagtattacaacagaccatgaacttcacggacatactaccagacctcaaatattaacatgctatttaaagatcttgcaaaacaatggtccataaactattaacttgagatgtttatcaaatgatgtatttccaaagataccacattccctaaaaaaggggaagatgataaagaaatagcgtacagcaggtagggatttattaccatatcatactgctctctcttcgaagggtcgcgcaatgtctagagtccagcattatcaaacttatgatactgttaatttggcacaaagattaaaacattacaaagcaaaatagatgtggtaacttacttgcctcgtatgcatctcttatttcctgaaatgtcctttttgcagcagtattccccctgtttgtgtctggatggtacctttttgcaagctacatacaagtagtaatctgtaattaattcaagtagaacatcatcaaaatctaacgcaagtcaactaccagtgcatctagtttatcttatcttaatcctagtctgaaaccacttcttaaaacatctacctatggaggtatggcggcaTtttctgtataataaaagaaatggttttaagctgttggactgattgttggtatgatcaacaagatatacatcagaaacaactcaagacaatactttgattcttcacagagacagacgaaaataacacggcaatgtgttttttcctccaaagtaaactgcaacacacaagaatgctagaaatggaaaatattaccacctgagaaattatattaactttatggcatgctcatgcccatgccaaaaaaaaaaactgagcaagccttgtggacttaaagagaactataatgtgacactcactgaatgAaaagccctcttgatttcttcctgcgaagcatctttaggaacaccaagaatcttgtaatagtccttctctggtgaactgtgttgacctggcagatgcgacagaaaatgcttgattggcctttgtgtttgaaataacaagataatatgattaccgagattcatgtaacaccaggacagcaacctgtagcatgAAaagacctgctcaatgtaaatgatgtcaacatgaaccgtccatagcatttatcaccaatatagatgccactggagctgcaagctgcatcgccagatgaaacaaaaaaaagtgggaagtgttaacgagcagagaatgacaggaggaaaaaaaagacggggcccatttggaacacatgaattttacaggattatgtttacaaacaacatcaacttgattacataaaccacactatttgaaacagttcaattcccatggcctcaatttagccaatagacgatatgtttgatttaaatcagcatcgtacccctgcagagacaaaaaatcttaattctctttctggagaacgactcatgagatagtcctcatagcatatcaaattattctctaatcccatactacattaacatcccaatagtaatcaatatcaccaacacattttcctaaaatgtattgtacgatacggaagctattattctgcagccatgtagtcaagttcactgttcaccacaagttaagaagaaagaagtCAcatatagtctaaatagaacctgaataatgcaaacaacaaccttaaaatcatgtgcctttgtcaccatcttacggatccataagattcaacctcgaacaacatttgcaagtagagattaaagaattatgtgctaaatcccaaacagacacatcgacagcagaaaatcagtttatggccccttttgggacagcttatgattatacagattatagattataatcaacttatagattatggaactatctaaagaatctgttggttgaataatttgccaatttatgtcctgattgttgataggctcattatctgaactaagtgtataaagactagaatgcccctattcagaatttttttcaccactttgttgacaaataaattctcctaggcaaaagagatgcatgccaatagaatgtagcatgacccatctgagaaaaaaattgtaacattattgaatttcaattcttctacagattattgtagcattgcctttcttaatgaaaagatgcacattgttgccacccaatttctgttcaagaggaaacacaccgacaatttttatgcattgttgattagcgttcaattgaagaatacatacaatctgaacattaatttgtctctttcagtcaaaaatccccaaatcacataagaggaaaggaaaaCAGAGAAAGAAaaagaacatttggatctagctgttagctgtagctcgcccgcggtggcggaggaacgaaccgataaatcattccgcaaaaccaaaccaacgcgagatagaacaaagcttatcaggacgaaggaaattacgcgtggaatgccgaatccatttgctcccctgcgcagccacctgcaggcacaaactccaatcaaaatgaacagctaaaccttcccaaagccccccaataccaaatcggggaaatggaaacaagcatcgcacgagacgaaatcgcctcacctcgccggagcgtagcgcgagagacctcgacgcgagccggagccaccccagccgtcccatccacggcggcggcggcgcacgcggcgaacgggcggctggtcttgcccgtggcccgtggagcctcgtggaagaagcgcgaggggcagaggtcccgagcgcgagagagtgggaggacgaggaggaggaggaggatcgcggaagaagcggagggttcgagaagattccagaagcagctcgagctgcctcgac

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CDS seq

atggagtgcaacgcttctctttgtattcaggtttttgagcatgatgtagatgcacatgccaacgatattgaggtagaggtgaatctttcctttagagatgctgttaaaggatgcatgaagcaagtctccttcagtgcaaaaaatctttgcgactcatgtgatgggagagggtacttggccaatgcaaagatgtatgtttgcccttcatgtagaggtgcaggaagagtttccattaacccattcacatccatttgtacttcttgcagaggctttgggaaagtaattaaggattactgcctgacatgcaaaggttcaggggtggtagatggcatgaaatatgtaaatgtgaccattccagcaggggttgattctggcgatacaattcatgtaccagaggctggacatagtggtggacgtggaaccctacctggaagtttgtacattaagcttcaagtagcaagtgatccagtgtttgttcgtgatggtgctgatatccatgtagacaaaaagattagcttcacacaggcaatgcttggtggaaaagttgaagtgccgactttagatggcacagcagaagttaagatacccaaaggagttcaaccagggcaggttatagttttaaggggtaaaggattgcccaaccaggctgggtatcttggggaccaacatgtccgatttcgaatacattttccctcaatggttaatgaacgtcaacgtgccctgttagaagaatttgcagtagaggaagccacgaaggaacagagttccttttcagctggaaactggctttaccagcagctgtctactggt

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Protein seq

MECNASLCIQVFEHDVDAHANDIEVEVNLSFRDAVKGCMKQVSFSAKNLCDSCDGRGYLANAKMYVCPSCRGAGRVSINPFTSICTSCRGFGKVIKDYCLTCKGSGVVDGMKYVNVTIPAGVDSGDTIHVPEAGHSGGRGTLPGSLYIKLQVASDPVFVRDGADIHVDKKISFTQAMLGGKVEVPTLDGTAEVKIPKGVQPGQVIVLRGKGLPNQAGYLGDQHVRFRIHFPSMVNERQRALLEEFAVEEATKEQSSFSAGNWLYQQLSTG

Function Chaperone protein dnaJ 1, mitochondrial [UniProtKB/Swiss-Prot:Q38813]

Transcripts

Gene Transcript Chromosome Start End Strand Source
OsKeNa_06g0007970 OsKeNa_06g0007970.02 Chr06 6015875 6022226 - NAM
CDS seq

atgggacggctggggtggctccggctcgcgtcgaggtctctcgcgctacgctccggcgaggtggctgcgcaggggagcaaatggattcggcattccacgccttgcagctccagtggcatctatattggtgataaatgctatggacggttcatgttgacatcatttacattgagcaggtcttTTcatgctacaggtcaacacagttcaccagagaaggactattacaagattcttggtgttcctaaagatgcttcgcaggaagaaatcaagagggctttTcattcacttgcaaaaaggtaccatccagacacaaacagggggaatactgctgcaaaaaggacatttcaggaaataagagatgcatacgaggcaagtaagttaccacatctattttgctttacattgcgcgacccttcgaagagagagcagtatgatatgctattttatagagggtctgagacaaattcctcaaaGagtgggatggattttgatggggcctatcaagatccattttcaggattccacaagcagggtcataatccctttgcagaattctacagacaaaacaatggtcctttttccagtaaattttacaaaatattcTccgaggtgactctttttccttccatatttttccagtttttacttaaa

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Protein seq

MGRLGWLRLASRSLALRSGEVAAQGSKWIRHSTPCSSSGIYIGDKCYGRFMLTSFTLSRSFHATGQHSSPEKDYYKILGVPKDASQEEIKRAFHSLAKRYHPDTNRGNTAAKRTFQEIRDAYEASKLPHLFCFTLRDPSKREQYDMLFYRGSETNSSKSGMDFDGAYQDPFSGFHKQGHNPFAEFYRQNNGPFSSKFYKIFSEVTLFPSIFFQFLLK

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Gene Transcript Chromosome Start End Strand Source
OsKeNa_06g0007970 OsKeNa_06g0007970.01 Chr06 6012694 6022226 - NAM
CDS seq

atggagtgcaacgcttctctttgtattcaggtttttgagcatgatgtagatgcacatgccaacgatattgaggtagaggtgaatctttcctttagagatgctgttaaaggatgcatgaagcaagtctccttcagtgcaaaaaatctttgcgactcatgtgatgggagagggtacttggccaatgcaaagatgtatgtttgcccttcatgtagaggtgcaggaagagtttccattaacccattcacatccatttgtacttcttgcagaggctttgggaaagtaattaaggattactgcctgacatgcaaaggttcaggggtggtagatggcatgaaatatgtaaatgtgaccattccagcaggggttgattctggcgatacaattcatgtaccagaggctggacatagtggtggacgtggaaccctacctggaagtttgtacattaagcttcaagtagcaagtgatccagtgtttgttcgtgatggtgctgatatccatgtagacaaaaagattagcttcacacaggcaatgcttggtggaaaagttgaagtgccgactttagatggcacagcagaagttaagatacccaaaggagttcaaccagggcaggttatagttttaaggggtaaaggattgcccaaccaggctgggtatcttggggaccaacatgtccgatttcgaatacattttccctcaatggttaatgaacgtcaacgtgccctgttagaagaatttgcagtagaggaagccacgaaggaacagagttccttttcagctggaaactggctttaccagcagctgtctactggt

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Protein seq

MECNASLCIQVFEHDVDAHANDIEVEVNLSFRDAVKGCMKQVSFSAKNLCDSCDGRGYLANAKMYVCPSCRGAGRVSINPFTSICTSCRGFGKVIKDYCLTCKGSGVVDGMKYVNVTIPAGVDSGDTIHVPEAGHSGGRGTLPGSLYIKLQVASDPVFVRDGADIHVDKKISFTQAMLGGKVEVPTLDGTAEVKIPKGVQPGQVIVLRGKGLPNQAGYLGDQHVRFRIHFPSMVNERQRALLEEFAVEEATKEQSSFSAGNWLYQQLSTG

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Gene Transcript Chromosome Start End Strand Source
OsKeNa_06g0007970 OsKeNa_06g0007970.03 Chr06 6012732 6017532 - IsoSeq
CDS seq

acacgtcaggctaacacatgccaaaacctagctctattactgcgccttatccacatatattgcacatgcattctcgtgaaaaatgtaaaatctaagttagcttgcatatatattgctccatctctttgcgttgacaggttcattcaaggaacatctggcatctgggctgctatgttgtca

Protein seq

TRQANTCQNLALLLRLIHIYCTCILVKNVKSKLACIYIAPSLCVDRFIQGTSGIWAAMLS

Event Type Chromosome Start End Strand Alternative mRNAs Total mRNAs Source
A3 Chr06 6013314 6013637 - OsKeNa_06g0007970.01 OsKeNa_06g0007970.03,OsKeNa_06g0007970.01 All

Expression

Leaf Root Panicle
FPKM 0.166292 0.000000 3.206186

Homologues

Genome & Annotation Homologs Type Expression(FPKM)
Leaf Root Panicle
Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) OsNip_06g0116800 SBH 4.066719 4.410540 10.257903
Nipponbare | IRGSP 1.0 | MSU LOC_Os06g11440 RBH 0.971606 0.353106 0.959780
Nipponbare | IRGSP 1.0 | RAP-db Os06g0116800 SBH None None None
Azucena | AzucenaRS1 | Gramene(+IsoSeq) OsAzu_06g0008120 RBH 0.000000 2.604879 1.504563
KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) NA NA NA NA NA
CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) OsCMeo_06g0007980 RBH 1.015708 2.337288 6.313999
ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) OsARC_06g0008100 RBH 0.031416 0.150295 None
PR 106 | Os127742RS1 | Gramene(+IsoSeq) OsPr106_06g0007980 RBH 3.262800 3.625225 21.325451
Minghui 63 | MH63RS3 | HZAU OsMH63_06G0100900 RBH 2.612574 5.7018735 16.3731495
IR 64 | OsIR64RS1 | Gramene(+IsoSeq) OsIR64_06g0007710 RBH 0.000000 0.0 0.975003
Zhenshan 97 | ZS97RS3 | HZAU OsZS97_06G0101000 RBH 3.9056155 6.4601835 10.9357415
LIMA | Os127564RS1 | Gramene(+IsoSeq) OsLima_06g0008161 RBH 0.037098 0.693571 None
KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) OsKYG_06g0007990 RBH 0.0 2.146698 None
GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) OsGoSa_06g0008050 RBH 1.030531 9.165945 None
LIU XU | Os125827RS1 | Gramene(+IsoSeq) OsLiXu_06g0008120 RBH 0.197756 0.513714 0.198353
LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) OsLaMu_06g0007900 RBH 0.105390 2.064028 None
N22 | OsN22RS2 | Gramene(+IsoSeq) OsN22_06G007820 RBH 0.162527 1.718681 1.425442
NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) OsNaBo_06g0008090 RBH 0.385336 0.000000 2.314565
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National Key Laboratory of Crop Genetic Improvement

Huazhong Agricultural University

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