Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_06g0005180 | OGI:06010770 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr06:3685050-3686454 | ||||||||
| Gene Symbol | RLP1, OsRLP1 | ||||||||||
| DNA seq | ttaataggtttttaacctcctgggcccacgagtcatggactaatttattcgtaattagtagagagattactatttgctaatcataagtggggtccacacctctctctcctatccttatagttggccataaggcccgaggcccgaaggcccggcccacggcacgcctttttggcccggcccaagcacggcacggcccgacttgggtcgggcccgtgctggcccggcccgaccgtcgggccgtgcctgggcctccccaccggcacgctgggctggcccggcacggtcgggccggcccggcacgatgggccggtaggccaggcccggtacataaagtatagggactaaaaatagacatataaatgtaaccgtctaaagaatagggaccttaaatagacttattttagctatttatataCcccagcccAaagaagagggaggtaaaatagactttttgtagctgtacatatgtcacagcccaataggagggaggaaatttagacttattctgaggaaaagcacgacggcccatcgtgccttcgggccggcccggcacggcccgaggcgtgttgggccgtgcctgggccgtgagtgcggcacgtgggctggcacggcacggcccggtgcgtcggtcgggccgtgccggcccgacaagtctcggcccaggcacggccgggcctgggccgtgccgtgccgggcggcccacatggccaactatacctatcctcttcttcctcacgtacgcccttgctgcccccgggcgacggcggcgaggggttggcgcacggggcgagcgggccgccgcagagcgccgtgccgaggaaggcgctcgccggcatcccggtgagcgacgccggcacggcgccaccgagctggccattgtacgacacgttgaactgcgcgagcttcggcagcatcaggttaccggggagcgtgccattgaagccgttgcggtcgaggttcagcgtggtcaggctcgcgagccggctgaactccggcgagacgccgccggtgaggcggttcccggagaggtccaccttctcgagcagcgccagcgagaagagcccctccggcaacctgccggcgagccggttcccggagaggttcagcgaccggagctggacgcagccgccgatgtccgcggggaccccgccggatatcgcgttcgtccggagcgacagcgtccgcagcgcggtgaggttgccgaccgtgcccacgggcaccgctcctctcaggctcttcccggggagccggagctcggtgacgcggtcgccggcggcggagcagtggagcacccgacgccgtgctacgcgccgccgcacggcgtgggcgcggacgggtcccacggcaggtgccgcccccccaccgcgtcccgcagcgccagcagcgccgcgcggtcgcccgccat
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| CDS seq | atggcgggcgaccgcgcggcgctgctggcgctgcgggacgcgctccggctccccgggaagagcctgagaggagcggtgcccgtgggcacggtcggcaacctcaccgcgctgcggacgctgtcgctccggacgaacgcgatatccggcggggtccccgcggacatcggcggctgcgtccagctccggtcgctgaacctctccgggaaccggctcgccggcaggttgccggaggggctcttctcgctggcgctgctcgagaaggtggacctctccgggaaccgcctcaccggcggcgtctcgccggagttcagccggctcgcgagcctgaccacgctgaacctcgaccgcaacggcttcaatggcacgctccccggtaacctgatgctgccgaagctcgcgcagttcaacgtgtcgtacaatggccagctcggtggcgccgtgccggcgtcgctcaccgggatgccggcgagcgccttcctcggcacggcgctctgcggcggcccgctcgccccgaggttaaaaacctattaa
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| Protein seq | MAGDRAALLALRDALRLPGKSLRGAVPVGTVGNLTALRTLSLRTNAISGGVPADIGGCVQLRSLNLSGNRLAGRLPEGLFSLALLEKVDLSGNRLTGGVSPEFSRLASLTTLNLDRNGFNGTLPGNLMLPKLAQFNVSYNGQLGGAVPASLTGMPASAFLGTALCGGPLAPRLKTY |
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| Function | Probable inactive receptor kinase At1g48480 [UniProtKB/Swiss-Prot:Q9LP77] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_06g0005180 | OsKeNa_06g0005180.01 | Chr06 | 3685050 | 3686454 | - | NAM | ||
| CDS seq | atggcgggcgaccgcgcggcgctgctggcgctgcgggacgcgctccggctccccgggaagagcctgagaggagcggtgcccgtgggcacggtcggcaacctcaccgcgctgcggacgctgtcgctccggacgaacgcgatatccggcggggtccccgcggacatcggcggctgcgtccagctccggtcgctgaacctctccgggaaccggctcgccggcaggttgccggaggggctcttctcgctggcgctgctcgagaaggtggacctctccgggaaccgcctcaccggcggcgtctcgccggagttcagccggctcgcgagcctgaccacgctgaacctcgaccgcaacggcttcaatggcacgctccccggtaacctgatgctgccgaagctcgcgcagttcaacgtgtcgtacaatggccagctcggtggcgccgtgccggcgtcgctcaccgggatgccggcgagcgccttcctcggcacggcgctctgcggcggcccgctcgccccgaggttaaaaacctattaa
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| Protein seq | MAGDRAALLALRDALRLPGKSLRGAVPVGTVGNLTALRTLSLRTNAISGGVPADIGGCVQLRSLNLSGNRLAGRLPEGLFSLALLEKVDLSGNRLTGGVSPEFSRLASLTTLNLDRNGFNGTLPGNLMLPKLAQFNVSYNGQLGGAVPASLTGMPASAFLGTALCGGPLAPRLKTY |
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.000000 | 0.0 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_06g0140200 | SBH | 0.580184 | 0.255420 | 2.033834 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os06g07590 | RBH | 0.0 | 0.0 | 0.000000 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os06g0140200 | SBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_06g0005310 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0021010 | SBH | 0.036886 | 0.207486 | 0.122091 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_06g0005120 | RBH | 0.0 | 0.0 | 0.000000 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_06g0005310 | RBH | 0.0 | 0.0 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_06g0005190 | RBH | 0.0 | 0.0 | 0.0 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_06G0064400 | RBH | 0.0576605 | 0.0929555 | 0.041999 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_06g0005070 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_06G0063500 | RBH | 0.6971905 | 0.0325325 | 1.672777 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_06g0005380 | RBH | 0.0 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_06g0005220 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_06g0005240 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_06g0005250 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_06g0005070 | RBH | 0.389658 | 0.0 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_06G005000 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_06g0005250 | RBH | 0.000000 | 0.0 | 0.0 |
