Basic Info |
| Gene ID | OGI # | Score | Accession | Assembly | Annotation | Location | Links | |||||||
| OsKeNa_04g0024900 | OGI:04087150 | 16/16 | KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | Chr04:28002083-28008444 | ||||||||
| Gene Symbol | 2ODD3, 2-ODD3, Os2-ODD3, Os2ODD3, OsSAH2, OsF3H04g | ||||||||||
| DNA seq | atggcaacgacgcagttgctgtccaccgtcgagcaccgggagacgctcccggagggctatgctcggcctgagtccgaccggccgcggctcgccgaagttgccacggacagcaacatcccgctcatcgacctcgcctcgccggacaagccgcgggtcatcgccgagattgctcaggcctgtcgcacctacggcttcttccaggtccctagctagctctcacacgcgcgctctaattaattaactgaacccgtacggcatatagcttagctagctaggttttgtgtgttcccactgcgggcttcacaaatattatgtccaaccatggcgacatcgccttgacggcattattttctccttcagtcgtcaagcctgcgtcctcttcagagctctgggctctctctgaatcatctgatgtatagatactgaagtaaaaacataaaccttcctaacttttcctttattataggtcaccaaccacgggatagcagaggagctactggagaaggtgatggccgtggcgttggagttcttcaggctgccgccggaggagaaggagaagctgtattccgatgagccatccaagaaaatcagactctctacgagctttaacgtccgcaaggagacagtacacaactggagagattatctccgccttcactgccacccgctggaggaattcgtacccgagtggccctctaatccggcacagttcaagtaagcacacactagctagatatatattatcgatcttggaaataaattaatttcagcagatcatatattccctcgtgacacggagaccttgtgctagaacacgcaaggtcaagttcgctatatcccacatgagcgcgtccgttggatgtcccacctgagatatagcacaacccaaaatcagcaaaactggccgtcaatccatgcgttacacattattatcgatattatgctaaacttttaatcatattaaatttgttggttgtctttttaaccatatatagcgacttagattaaacaagaataaatgtccgttaaagatcaacgaagctaaaccgagagtttaagataggtacaacatatcctattctataataactaaaactaattaaagagtctatgtgtatttataatgacatgtttgatttaacataaattctcagtccaaaatgtgatactttaactaattaacatatgagcttacgcagagtgtcaaattatatagtacagatgttgataaatatttagttgttctcacccatgatctatgcatatggttttggtatcaaatccaacaatttgataccactcaaacgattagtgcaggcgcgctctagattagagttgggctttatgttgattgtaagggtgtttctctgggtgatctcgtctgtgttcctttgttggtctagcgccggtcggtcacgcttagcgcggtggccggtccgatgctagccttctcccagacctgtgtgttggcactatcgatgtgtgggtggtggtatacttttttcttttttcctagttacgaccttgcatggttgtaatcttgtaattttttcctgctctatcaatagaacttcgcaccgtctcgtgcgagtcattcaaaaaaaatccaacaatttgtcagggcacacatatatataataagaactaaaatgctgaccttcttgccccccccccctcccatttttttaatccttaagtggccggccgcatgaggaatagttactacttcctccgtttcacgatataagtcattctagcatttcccacattcatattaatgttaatgaatctagacatatctatctatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacagagggagtatttcagtttgagcaaagaaattggccagactgtatttacagcctgcacactctttccttcaaggaagtgtgtccgctcatctcaatgggtctgttctatgcatggcatgcgctatatacaaggcttctacaaacgtagcgagcttgcggcaagctagctagtatcccaattgccaccacaaatataagtattttatgaatagcgcgcgataaacatgacaaacctttgattttacttttgttgccaaatgccaatagaaaaaagatcacaagattgatggcataaaaatgctaattacaaactaattaaataaatttatcgtgaaacaaactaattacataatagtatgcaaccttttctatttaaaataatttaactttatcaataatactattggtcaaagtaggacacaagagactatatcaatatctaacatggttatatttgtaaagggtgagagtactacaaaatgtactcctaactagctcctcgtaactactccctctattcacaaataatcagcatatatggtttatgcagcgataccaatacattcctacataccacttaaattggcatcgatcaacatgcaacactgtttcgtgtgtcctgcacatacatcaagggtaatttagacatgatattgcttgcatgcatgcatgcaccacaatagtaatagttagtttaagagatttgctccggtccaacaaaaagtatcttgaggtattagtacctcacggtactaaatcatttctgatcgttggatttagttgggcaggatgaatattgttagatccaacgatctgataccgtgaggtatcgatacctcgaaatactttttgttagaccaaagcaaatctcttagttgaatggtactacatggaacaatgcatgcaaataaccacttaatacttcacagaaaaacaaaaagtcacaagtaccaaatatgctcatcatttctgaataacttgaaaaagttaattatttgtgaatgaatggagtacttccttaaaagaatagctactagttcgtaaaaaaaaaaaaccatagcttagatgctgaaagctgtttactgtcgttgaaaaaaaaaagcgagtacagtgcatgccacagctgcagctgtttagatctctttattttaagactgttctctctttctttaagactactgttctcacttattttgatgttctcctgtagccctgtgacgttgtagacttgtggtgcatgcacctagttcaaccaaattcacatgtctccatttgtataactactaattatagctttatacggtaatggatggtcacgtacttacgatgctaattaacggcaaaaacattaaatacgtgcgtacgtacatctagctagctaattagtaattaattaagttgtcgcaccttctttcaagttgatagatttcatagtatatccctggctaattaatatgtgtatttgtccggcggtccgtgtttcacaatcgaccggtccacaactttgttagtatgcacctcatattaaacttagagttttagctcatggcccgctcaaatataatggtgtgaccggccggccatgcatgtatggcgagcacttcacatgttcaaacgatgcatacatgtatagatcaattcattttctccagaaatacgcagtgcagtcgatagataattatcatgccaagtcgattgacacttttgacagttatcatgagctcatacccctcggtgggccataatggtcgctacgcgtacacgtaggtgctgcttttttgctggtatgtataataagaggaatttttacggttattgagaaaatacttagataccaaaactttacactaaaagcttttagtaccttgaggtacttactacctagaggtacgtaccaaattttacaaacagagatttgctacagtccaacaaaaaataactcaaggtactcacggtatcaaatcgttttcgatcgttagatataacaatactcatcctgtctagctaaatctaacgatctaaaatgatttgataccatgagataacgatgcctcgagctatttttattagactgaagtaaatctcatagaaaatatggtacctctgcataccttcttaaggatagtaaattacccatataataaagatgggattaagtgcccgtacgtagcgtatatggtccagaacacaattaagtgcggcgtgcactatatgtgtactggtcgaatggaatatgcatgcacataaaggagtacttgtgtcgctcaattaatttgcagaagggagtggctcagacaagctccacccttacaggggaatcattatttcatttttgttgaatactagctaatatggtcctcaattttcacttcgagatcattttagtcccagatattctatatttaaaaaaatatcctaaaactttgtcacgtagctttgtatagtccttgagcccattaaaaaggccacgtagaaatgtctcgtcattctctcgtgcaatgccgggtttttgttgttgcaaatttcacaatatgtaacttaaaaggtgagatccacgtccattgcattggcacatgaatgaataggaccgaggaggaataagatgacagagaacaatatttttcttccattccttttggcctatttatatacatagacaactcaacgtatgaactatattatatagcctaccctcataatgtgagattttcgttttccattggctgcccttaaatatccattctaccttcatgtacagtagaataaaaaggagggaatttatggatggaagttagctaaataaggggttgtatatatattttaaaacaaaatttaaacgttagaaatataatttacaatggagtgagtatttgttaagaaaagaaggaaatttccggaaacaacgatgtcccaaaacctcgtctagctacctaatccaaaaacttctacgttttactttggaaacagtatccctcaacctccgtttagtgtcactccttctgtcccattttaagtgtagacgtgggtttctatatccaacgtttgatcgtccgttttatttgaaattttttatgattaatatttttattgttattagacgataaaaatatgaatagtgtgctttatgtgagatttatttttttatttttcttatatttttaaaataagatgaacgatcaaatattaaacacgaaaacccataacaacacttaaaatagaacggatggagtagttagcaaatcttccacatgccgttatagtcgcacggtccgcggtcgcagccatgcctagaagtctacaacaaccgagcaatacagttcaatcacgtagaagactaatcaccctaccagagacatgcatgaacttgcgagatttttactcgagacaaatcgtggaaaaggtaaaccgcacccttgacctcgcaaaaagaaggggaccgattcttcatcggtctcctacttcgtctgttaattccaaaatccaatgtgctggagtaaaatcaagctagctgaagtccaggacagcaactagtttcagtaaaacgccaaaattaaggcgtggacgcttaattttccgttgcactttttcctggcatgcagggagattatgagcacgtactgccgagaagtccggcaactggggctccggcttctcggcgccatctctgtcagcctcggcctcgaggaggactacatcgagaaggtgctcggcgagcaggagcagcacatggctgtgaactactacccgcggtgtccggagccggacctgacctacggccttcccaagcacacggaccccaacgccctcaccatcctcctccccgatccccatgtcgccggcctccaggtcctcagggacggcgaccagtggatcgtcgtcaacccacgccccaacgctctcgtcgtcaacctaggcgaccagatacaggtcacatagtacataatcatactacattcatcccaaaatataacaacttttaagtagatgggacataatctaatattacaaatctagacatgaggcttgtccatattcatagtactagattaaaattgctatattttgagacggatgaagtattaattatgcattctccacttatttcaaaataaattaatctagtactaatatattctagtaatataaatctggataattatgctattaatttattttgagccggaaggagtataaatttctgtcattgcagtgtgtgtaccgtcaggctgaactgctgatatttatgcaggctctgagcaatgacgcgtacaagagcgtgtggcaccgtgcggtggttaacgcggtgcaagagcgcatgtcggtggcatctttcatgtgtccgtgcaacagcgcggtgatcagcccggcgaggaagctcgtcgcggacggggacgcgcccgtgtaccggagcttcacctacgacgagtactacaagaagttctggagcaggaacctggaccaggagcactgcctagagctcttcaaaggccagtag
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| CDS seq | atggcaacgacgcagttgctgtccaccgtcgagcaccgggagacgctcccggagggctatgctcggcctgagtccgaccggccgcggctcgccgaagttgccacggacagcaacatcccgctcatcgacctcgcctcgccggacaagccgcgggtcatcgccgagattgctcaggcctgtcgcacctacggcttcttccaggtcaccaaccacgggatagcagaggagctactggagaaggtgatggccgtggcgttggagttcttcaggctgccgccggaggagaaggagaagctgtattccgatgagccatccaagaaaatcagactctctacgagctttaacgtccgcaaggagacagtacacaactggagagattatctccgccttcactgccacccgctggaggaattcgtacccgagtggccctctaatccggcacagttcaaggagattatgagcacgtactgccgagaagtccggcaactggggctccggcttctcggcgccatctctgtcagcctcggcctcgaggaggactacatcgagaaggtgctcggcgagcaggagcagcacatggctgtgaactactacccgcggtgtccggagccggacctgacctacggccttcccaagcacacggaccccaacgccctcaccatcctcctccccgatccccatgtcgccggcctccaggtcctcagggacggcgaccagtggatcgtcagcgtgtggcaccgtgcggtggttaacgcggtgcaagagcgcatgtcggtggcatctttcatgtgtccgtgcaacagcgcggtgatcagcccggcgaggaagctcgtcgcggacggggacgcgcccgtgtaccggagcttcacctacgacgagtactacaagaagttctggagcaggaacctggaccaggagcactgcctagagctcttcaaaggccagtag
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| Protein seq | MATTQLLSTVEHRETLPEGYARPESDRPRLAEVATDSNIPLIDLASPDKPRVIAEIAQACRTYGFFQVTNHGIAEELLEKVMAVALEFFRLPPEEKEKLYSDEPSKKIRLSTSFNVRKETVHNWRDYLRLHCHPLEEFVPEWPSNPAQFKEIMSTYCREVRQLGLRLLGAISVSLGLEEDYIEKVLGEQEQHMAVNYYPRCPEPDLTYGLPKHTDPNALTILLPDPHVAGLQVLRDGDQWIVSVWHRAVVNAVQERMSVASFMCPCNSAVISPARKLVADGDAPVYRSFTYDEYYKKFWSRNLDQEHCLELFKGQ |
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| Function | Flavanone 3-dioxygenase 2 [UniProtKB/Swiss-Prot:Q8W2X5] | ||||||||||
Transcripts
| Gene | Transcript | Chromosome | Start | End | Strand | Source | ||
| OsKeNa_04g0024900 | OsKeNa_04g0024900.01 | Chr04 | 28002083 | 28008444 | + | NAM | ||
| CDS seq | atggcaacgacgcagttgctgtccaccgtcgagcaccgggagacgctcccggagggctatgctcggcctgagtccgaccggccgcggctcgccgaagttgccacggacagcaacatcccgctcatcgacctcgcctcgccggacaagccgcgggtcatcgccgagattgctcaggcctgtcgcacctacggcttcttccaggtcaccaaccacgggatagcagaggagctactggagaaggtgatggccgtggcgttggagttcttcaggctgccgccggaggagaaggagaagctgtattccgatgagccatccaagaaaatcagactctctacgagctttaacgtccgcaaggagacagtacacaactggagagattatctccgccttcactgccacccgctggaggaattcgtacccgagtggccctctaatccggcacagttcaaggagattatgagcacgtactgccgagaagtccggcaactggggctccggcttctcggcgccatctctgtcagcctcggcctcgaggaggactacatcgagaaggtgctcggcgagcaggagcagcacatggctgtgaactactacccgcggtgtccggagccggacctgacctacggccttcccaagcacacggaccccaacgccctcaccatcctcctccccgatccccatgtcgccggcctccaggtcctcagggacggcgaccagtggatcgtcagcgtgtggcaccgtgcggtggttaacgcggtgcaagagcgcatgtcggtggcatctttcatgtgtccgtgcaacagcgcggtgatcagcccggcgaggaagctcgtcgcggacggggacgcgcccgtgtaccggagcttcacctacgacgagtactacaagaagttctggagcaggaacctggaccaggagcactgcctagagctcttcaaaggccagtag
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| Protein seq | MATTQLLSTVEHRETLPEGYARPESDRPRLAEVATDSNIPLIDLASPDKPRVIAEIAQACRTYGFFQVTNHGIAEELLEKVMAVALEFFRLPPEEKEKLYSDEPSKKIRLSTSFNVRKETVHNWRDYLRLHCHPLEEFVPEWPSNPAQFKEIMSTYCREVRQLGLRLLGAISVSLGLEEDYIEKVLGEQEQHMAVNYYPRCPEPDLTYGLPKHTDPNALTILLPDPHVAGLQVLRDGDQWIVSVWHRAVVNAVQERMSVASFMCPCNSAVISPARKLVADGDAPVYRSFTYDEYYKKFWSRNLDQEHCLELFKGQ
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| Event Type | Chromosome | Start | End | Strand | Alternative mRNAs | Total mRNAs | Source |
Expression
| Leaf | Root | Panicle | |
| FPKM | 0.0 | 0.0 | 0.000000 |
Homologues
| Genome & Annotation | Homologs | Type | Expression(FPKM) | ||
|---|---|---|---|---|---|
| Leaf | Root | Panicle | |||
| Nipponbare | IRGSP 1.0 | Gramene(+IsoSeq) | OsNip_04g0581000 | RBH | 0.000000 | 0.175686 | 0.0 |
| Nipponbare | IRGSP 1.0 | MSU | LOC_Os04g49194 | RBH | 0.000000 | 0.117731 | 0.0 |
| Nipponbare | IRGSP 1.0 | RAP-db | Os04g0581000 | RBH | None | None | None |
| Azucena | AzucenaRS1 | Gramene(+IsoSeq) | OsAzu_04g0024160 | RBH | 0.0 | 0.0 | 0.0 |
| KETAN NANGKA | Os128077RS1 | Gramene(+IsoSeq) | OsKeNa_02g0026140 | SBH | 0.0 | 0.000000 | 0.239700 |
| CHAO MEO | Os132278RS1 | Gramene(+IsoSeq) | OsCMeo_04g0024600 | RBH | 0.0 | 0.0 | 0.0 |
| ARC 10497 | Os117425RS1 | Gramene(+IsoSeq) | OsARC_04g0024380 | RBH | 0.0 | 0.000000 | None |
| PR 106 | Os127742RS1 | Gramene(+IsoSeq) | OsPr106_04g0024510 | RBH | 0.0 | 0.0 | 0.000000 |
| Minghui 63 | MH63RS3 | HZAU | OsMH63_04G0463200 | RBH | 0.3380515 | 7.1552765 | 0.115905 |
| IR 64 | OsIR64RS1 | Gramene(+IsoSeq) | OsIR64_04g0023340 | RBH | 0.0 | 0.0 | 0.0 |
| Zhenshan 97 | ZS97RS3 | HZAU | OsZS97_04G0466400 | RBH | 3.0968845 | 147.123413 | 0.432995 |
| LIMA | Os127564RS1 | Gramene(+IsoSeq) | OsLima_04g0023800 | RBH | 0.000000 | 0.0 | None |
| KHAO YAI GUANG | Os127518RS1 | Gramene(+IsoSeq) | OsKYG_04g0023630 | RBH | 0.0 | 0.0 | None |
| GOBOL SAIL | Os132424RS1 | Gramene(+IsoSeq) | OsGoSa_04g0023760 | RBH | 0.0 | 0.0 | None |
| LIU XU | Os125827RS1 | Gramene(+IsoSeq) | OsLiXu_04g0024150 | RBH | 0.0 | 0.0 | 0.0 |
| LARHA MUGAD | Os125619RS1 | Gramene(+IsoSeq) | OsLaMu_04g0024360 | RBH | 0.0 | 2.121758 | None |
| N22 | OsN22RS2 | Gramene(+IsoSeq) | OsN22_04G023590 | RBH | 0.0 | 0.0 | 0.0 |
| NATEL BORO | Os127652RS1 | Gramene(+IsoSeq) | OsNaBo_04g0023510 | RBH | 0.0 | 0.000000 | 0.000000 |
